![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
CcUC07G139110 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCAAAATTCAACGATTCGTTCCCTTCTGAAAGAAGTAAGCCGGAGAAGGGCCGATAATGGAAATAAGGCCTTCCTCAATTTCAAATTTCCGCCATTAAATTTCTTCTCGGAGGTCGCCCATGTCTCCGTCATCAACCGTTCTTCACTGAAGCCGCCGACCCCATAACCCTGCAATAGTATCAACCATGACCTCCAGCGCCATGCCGGCTACGGCTCAGCAACACCAATGGAGCGAGGAGGAGACGAGGGAGTTCATTCGAATTCGAGCCGACCTAGAGAAGGACCTGACGGCGGCTTCCACCGGAGAAGCTCCGGCGGCGAAGAAGAAAACACTGTGGGAGATGGCGAGTGCTAGGATGCAAGAGAAAGGGTTTTGGAGGACCGCCGATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGGTTGGTCCACTTTCTGATTCGGTATTAAACTATTAATTACGGAATTTTTTGAATCTGTAATTTTAGTCTAGTTTCTTCTACATTATGTACCTTTCAAGTGGGCTCCTCTGAATCTGGACTGTACTTGCTTTGTTCTGTTGATTCTCCTGGCATTTGATGGATGGGGTTTCAATTCGCCATTTCTGGTTGCAGATTCTTGAAGTTCAATCTGGGAAAGCCAGTAAAATGTCTTAATAATGTCTCGCAATATGCGGGCGAGAACAGGACAAGAAATCTTGTTGTCTTTGTTCAAAATAGACGTGTTTTTGACCCTTCGAACTTCAAACGTATGTATTGTTTTTCCATAATTGGACTCTAGTAGAAACTAACTTCGAGATTTTTATTCTGAAACTTGCCTTCCCATCTACCATACTTTCCGACGTAACAAAATGAAAGCTCTTCCTCTGGACCCCAGTTTAAGTGCACCCCAAATATTTTGAATATCAAATTTTCATTGCTTTTTGGGAAAACGATCTTCAGATTTCTGAGTATATTAGTAATATGTTTGAATGGGAACTATTTTGTTGGGGAGCCTTCTTTATTACAGTTTTTTAATGGTTGATTTGCAAGAAAGGAGCGGATGGAATTTACTAGACTAGGACATTAACTCTAAACACTAACCTTCAAGGTTGTATGGCGCTTGAAAACTTAGCGAAACAGATTTGGCTTTGATAAGGAATGACTTTGTAGATTTTCCATGGAGCATAGTGTTCTTTAGCTTCCTGTAATTGCCAGTAGGTCTTCAAAAACCTCCATTTCCAGTCTTTTTATCCTCAATCTTCTTGGTTGGTTATTCCCCACGAAGTCAGGCGCCTAAGTGATAAGATGATTCTAGATTGTTACGCCTCTTGAATCTAGAAAATAGACTGTTCTTAAGTTTTCTCTTTTAAATATTTCTTGCATAATCTCTTAGTTACCAATGGATGGTCCTCTCAATTCTAATGAACAGATCTAATAGAGGAACCTTCTTATGCATTTGCAAGATGGCTCATGCATGCGTAGATGGCAAGGATGTTAATTATTCTGTCCACCGAATCTAGGACCATGTTTAAAAATTAGTGCAAACTTATCGAGCAAGCTATTTGAATTAGGCATATTTTGCTTATTAGAATTCAATGTTAGTACCTGTTATTTGGTAGTGGCTTGTAATTATAAGAAGCTCAAGGTGCAATAAAGCGCGATAGTCTTTTGGGATTTAAGCACAAGATGAAAAAAGAAAAAGCACAAGCCTTTTTTTTCTGTGAAGCGCACTATATATAGAAGTACTACAGAAAGAGAAGAAAGCATAGTTGAAGTGTAAATATGAAAGAGAAAAAAAAAAACCTAAACACAAGAAATTTTAAATTTACACTTAGTAAATTTGATTTTTTTTTGTTAATAAAGAGGGAAAACCCCAAGTTATTACTATTTTTTAAAATAATGTAAATACCCCAAGGCCCAAGGCTTTGAGCCTTGGGGCTTCACTCAGGCACGCCTTACTTTGTGAGCTAAAGCTAGGCGCCAAACTTGCGCCTTGGGACCTAGGTGCGTTCCTAGGAGGGCTTTTTAAAACACTGATCATGAGGGATGTGGCTTTGTGGCTGAGTGGGGTTGATTAGAGTAAAGCAGTGATGTTATTATCTTCTCCTACATTTCAGAGTTGCATCAGTGAGGGGATAAAACAGACCTAAGGCTTATGTTCCTTTTCTAGATATCTATACAGGTGTTCAACTTCCCTAGGGCCATATGCACCAGAAGAATTGACACTTCAGTTTCCTGAAGATGTGGGATTACACGATGGGAAGAGTGGTAGAATAAGCAAGAAGGTATAGGGAGATTTTAACGTAGATAAACCAGAAATCTTTCTTTCTACGCTTGTTTCATGCATAAGATCATTGAACTCCTGCAATATGAAGAAGAACGGTTCATCCAGGAAATTCGCCATTCATTAGTCAATTAGCGGAATTTCTCATTCATTAAAATATATCTTTTAAACTGAGCTCCGTCCAGCTGTCTCTCTTTCTTTAAAGTGCCTTCTAAAACTAAGCTTCAAAATGAGCACTTTTCCAACATTGCAGCTCAAGCATTGAGTTTAGCAAGTGTGAGTGAACAAAAATATAATTGAACCCCCCCACCATCGCCCCTCCTCTCTTCTTTTTCAGGCGGATGGTTGAAAGAGGGGAGTTAGTTGCTTCCTGTATATGTAGTAATTTCTTACATTAATATTCGTAGAAAAAGCATCGACATTCATGCTAAGCTTCCTTTCATGTAATTTAGGCTGAGCTTACCATAGAATTCCTATAATGAATTAGCTTGGAATTAGCTCGACTTGTCAAGTCCAACTTTGGCCCAAATATAGTGAGCTATAGATATCCCTAGAAGTTGAGGCAGTGGTTGGCAATGTTCAGTGTTGATTAGTCAGTAATATGTTTCTAATGTTAAAATGTTTGTACAGGGGAAAGAGACATCTCATAAAGAGTTCGGCTGGCAATGCCCATTTTTTGAAGAAATCCATGCAGTTTTTACTGAAAGAGGAAAAGCTATGCACCGATTGCTCCTCGAACCTGAAGCATGTTCTATTGCAACAAAGAAAAGGGTGAGGGAGAGAAGTTTAGAGGAATATTCAGATCTCAAACAACTCAATGAAGACGAAACTGAGGAGGAGGTGACTCTCACTCAAAGCAACTCACAGAAGAGAAAGGCTGCAAGAACTCTCCCAGCAAAGTCTTTAGGAGCAACCGATTCTAAAAATTCTAGTAGCTCGGTTAGTAATGAAATTCTAGAAATGCTGAAGGGCTTCTTCCAGTGGCAGCAGAGGATGGAGATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGTCGATCGTTTGAGCAGGAATGGCGCGAATCAATGGAGAAGCTCGAGAGGGAGAGGTTAATGGCTGAGCAAGCTTGGAGGGAAAGGGAAGAACAGAGAAAGAAAAGGCAAGATATACGAGCTGAAGGAATGGATGCCCTCTTAACAACCCTTTTAAACAAACTCAACCGCGAAAATAATTTATGA CCAAAATTCAACGATTCGTTCCCTTCTGAAAGAAGTAAGCCGGAGAAGGGCCGATAATGGAAATAAGGCCTTCCTCAATTTCAAATTTCCGCCATTAAATTTCTTCTCGGAGGTCGCCCATGTCTCCGTCATCAACCGTTCTTCACTGAAGCCGCCGACCCCATAACCCTGCAATAGTATCAACCATGACCTCCAGCGCCATGCCGGCTACGGCTCAGCAACACCAATGGAGCGAGGAGGAGACGAGGGAGTTCATTCGAATTCGAGCCGACCTAGAGAAGGACCTGACGGCGGCTTCCACCGGAGAAGCTCCGGCGGCGAAGAAGAAAACACTGTGGGAGATGGCGAGTGCTAGGATGCAAGAGAAAGGGTTTTGGAGGACCGCCGATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGATTCTTGAAGTTCAATCTGGGAAAGCCAGTAAAATGTGTTCAACTTCCCTAGGGCCATATGCACCAGAAGAATTGACACTTCAGTTTCCTGAAGATGTGGGATTACACGATGGGAAGAGTGGTAGAATAAGCAAGAAGGGGAAAGAGACATCTCATAAAGAGTTCGGCTGGCAATGCCCATTTTTTGAAGAAATCCATGCAGTTTTTACTGAAAGAGGAAAAGCTATGCACCGATTGCTCCTCGAACCTGAAGCATGTTCTATTGCAACAAAGAAAAGGGTGAGGGAGAGAAGTTTAGAGGAATATTCAGATCTCAAACAACTCAATGAAGACGAAACTGAGGAGGAGGTGACTCTCACTCAAAGCAACTCACAGAAGAGAAAGGCTGCAAGAACTCTCCCAGCAAAGTCTTTAGGAGCAACCGATTCTAAAAATTCTAGTAGCTCGGTTAGTAATGAAATTCTAGAAATGCTGAAGGGCTTCTTCCAGTGGCAGCAGAGGATGGAGATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGTCGATCGTTTGAGCAGGAATGGCGCGAATCAATGGAGAAGCTCGAGAGGGAGAGGTTAATGGCTGAGCAAGCTTGGAGGGAAAGGGAAGAACAGAGAAAGAAAAGGCAAGATATACGAGCTGAAGGAATGGATGCCCTCTTAACAACCCTTTTAAACAAACTCAACCGCGAAAATAATTTATGA ATGACCTCCAGCGCCATGCCGGCTACGGCTCAGCAACACCAATGGAGCGAGGAGGAGACGAGGGAGTTCATTCGAATTCGAGCCGACCTAGAGAAGGACCTGACGGCGGCTTCCACCGGAGAAGCTCCGGCGGCGAAGAAGAAAACACTGTGGGAGATGGCGAGTGCTAGGATGCAAGAGAAAGGGTTTTGGAGGACCGCCGATCAGTGCAAATGCAAGTGGAAGAATCTCCTCAGTCGCTACAAGATTCTTGAAGTTCAATCTGGGAAAGCCAGTAAAATGTGTTCAACTTCCCTAGGGCCATATGCACCAGAAGAATTGACACTTCAGTTTCCTGAAGATGTGGGATTACACGATGGGAAGAGTGGTAGAATAAGCAAGAAGGGGAAAGAGACATCTCATAAAGAGTTCGGCTGGCAATGCCCATTTTTTGAAGAAATCCATGCAGTTTTTACTGAAAGAGGAAAAGCTATGCACCGATTGCTCCTCGAACCTGAAGCATGTTCTATTGCAACAAAGAAAAGGGTGAGGGAGAGAAGTTTAGAGGAATATTCAGATCTCAAACAACTCAATGAAGACGAAACTGAGGAGGAGGTGACTCTCACTCAAAGCAACTCACAGAAGAGAAAGGCTGCAAGAACTCTCCCAGCAAAGTCTTTAGGAGCAACCGATTCTAAAAATTCTAGTAGCTCGGTTAGTAATGAAATTCTAGAAATGCTGAAGGGCTTCTTCCAGTGGCAGCAGAGGATGGAGATGGAATGGAGGGAAATACTTGAGAGACATTACAACAACCGTCGATCGTTTGAGCAGGAATGGCGCGAATCAATGGAGAAGCTCGAGAGGGAGAGGTTAATGGCTGAGCAAGCTTGGAGGGAAAGGGAAGAACAGAGAAAGAAAAGGCAAGATATACGAGCTGAAGGAATGGATGCCCTCTTAACAACCCTTTTAAACAAACTCAACCGCGAAAATAATTTATGA MTSSAMPATAQQHQWSEEETREFIRIRADLEKDLTAASTGEAPAAKKKTLWEMASARMQEKGFWRTADQCKCKWKNLLSRYKILEVQSGKASKMCSTSLGPYAPEELTLQFPEDVGLHDGKSGRISKKGKETSHKEFGWQCPFFEEIHAVFTERGKAMHRLLLEPEACSIATKKRVRERSLEEYSDLKQLNEDETEEEVTLTQSNSQKRKAARTLPAKSLGATDSKNSSSSVSNEILEMLKGFFQWQQRMEMEWREILERHYNNRRSFEQEWRESMEKLERERLMAEQAWREREEQRKKRQDIRAEGMDALLTTLLNKLNRENNL Homology
BLAST of CcUC07G139110 vs. NCBI nr
Match: XP_008451911.1 (PREDICTED: trihelix transcription factor GT-3b-like [Cucumis melo] >KAA0044964.1 trihelix transcription factor GT-3b-like [Cucumis melo var. makuwa] >TYK16505.1 trihelix transcription factor GT-3b-like [Cucumis melo var. makuwa]) HSP 1 Score: 464.5 bits (1194), Expect = 7.3e-127 Identity = 253/325 (77.85%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of CcUC07G139110 vs. NCBI nr
Match: XP_038900362.1 (trihelix transcription factor GT-3b-like [Benincasa hispida]) HSP 1 Score: 460.7 bits (1184), Expect = 1.1e-125 Identity = 256/325 (78.77%), Postives = 264/325 (81.23%), Query Frame = 0
BLAST of CcUC07G139110 vs. NCBI nr
Match: XP_004148982.1 (trihelix transcription factor GT-3b [Cucumis sativus] >KGN53440.1 hypothetical protein Csa_014682 [Cucumis sativus]) HSP 1 Score: 459.5 bits (1181), Expect = 2.4e-125 Identity = 250/320 (78.12%), Postives = 259/320 (80.94%), Query Frame = 0
BLAST of CcUC07G139110 vs. NCBI nr
Match: XP_022136574.1 (trihelix transcription factor GT-3b-like [Momordica charantia]) HSP 1 Score: 427.9 bits (1099), Expect = 7.6e-116 Identity = 239/326 (73.31%), Postives = 257/326 (78.83%), Query Frame = 0
BLAST of CcUC07G139110 vs. NCBI nr
Match: XP_022982252.1 (trihelix transcription factor GT-3b-like [Cucurbita maxima]) HSP 1 Score: 421.4 bits (1082), Expect = 7.1e-114 Identity = 237/325 (72.92%), Postives = 252/325 (77.54%), Query Frame = 0
BLAST of CcUC07G139110 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 1.1e-29 Identity = 103/312 (33.01%), Postives = 156/312 (50.00%), Query Frame = 0
BLAST of CcUC07G139110 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.6e-26 Identity = 97/320 (30.31%), Postives = 156/320 (48.75%), Query Frame = 0
BLAST of CcUC07G139110 vs. ExPASy TrEMBL
Match: A0A5D3CYD0 (Trihelix transcription factor GT-3b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003130 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.5e-127 Identity = 253/325 (77.85%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of CcUC07G139110 vs. ExPASy TrEMBL
Match: A0A1S3BSN5 (trihelix transcription factor GT-3b-like OS=Cucumis melo OX=3656 GN=LOC103493063 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.5e-127 Identity = 253/325 (77.85%), Postives = 265/325 (81.54%), Query Frame = 0
BLAST of CcUC07G139110 vs. ExPASy TrEMBL
Match: A0A0A0KV13 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G055350 PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 1.1e-125 Identity = 250/320 (78.12%), Postives = 259/320 (80.94%), Query Frame = 0
BLAST of CcUC07G139110 vs. ExPASy TrEMBL
Match: A0A6J1C4P6 (trihelix transcription factor GT-3b-like OS=Momordica charantia OX=3673 GN=LOC111008249 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 3.7e-116 Identity = 239/326 (73.31%), Postives = 257/326 (78.83%), Query Frame = 0
BLAST of CcUC07G139110 vs. ExPASy TrEMBL
Match: A0A6J1IW60 (trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC111481131 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 3.4e-114 Identity = 237/325 (72.92%), Postives = 252/325 (77.54%), Query Frame = 0
BLAST of CcUC07G139110 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 132.1 bits (331), Expect = 8.0e-31 Identity = 103/312 (33.01%), Postives = 156/312 (50.00%), Query Frame = 0
BLAST of CcUC07G139110 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 120.9 bits (302), Expect = 1.8e-27 Identity = 97/320 (30.31%), Postives = 156/320 (48.75%), Query Frame = 0
BLAST of CcUC07G139110 vs. TAIR 10
Match: AT5G47660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05 Identity = 24/69 (34.78%), Postives = 39/69 (56.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|