CcUC07G138100 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G138100
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr07: 23728628 .. 23731480 (+)
RNA-Seq Expression	CcUC07G138100
Synteny	CcUC07G138100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATTTGAAGGTGGGGAGAATAGAAGATGCGGTTCGGATCTTTGATGGCATGGAAGAAAAGGATGTGGTTTCTTGGAGCTCCATGATTGATGGGCTCTGCAGGGTTGGGAATGTTGTTTGGGCTAGAAGCTTGTTTGACAAAATGCCTGAAAGAAATGTGGTTACTTGGACAACAATGATTAATGGGTATATGAAGATGGAAAATTTTAAAGATGGTTTCATATTGTTTCTAAATATGAGAAGGGAAGGGGTGGAGGTTAATGCAACTACCTTGACGGTTTTGTTTGAAGCCTGTGGTTGTTTTGATCGATATGGAGAAGGAATTCAGATTCATGGGTTGGTTCTGTCCTTGGGGTTTGACTTAGATGCTTATCTAGCCAATTCTATGATCACGATGTATTCTAGATGTTATTCTATAGATGCAGCTGCTAAAATATTTGATTTAATGGTCAAGAAAGATATAGTTACATGGAATTCTTTGATTGCAGGTTATGTTCAATCTGGTAACGTGGAAAAAGCTTTTTCTCTATTTGAGAATATGCCACAAAAGGATGTGGTTTCCTGGACAACTTTGATTTCTGGATTTGCCAGCAAGGGGATGATTGATGAATCCATTGGTCTGTTTCAAATGATGCCTGAGAAGGATGATATTGCTTGGACTGCTGTAATCTCAGGGCTTGTGAGCAATCAGGAATATGAGATAGCTTTCCGTTGGTTTATTGAGATGCTTCAGAAAGTAGTCAAGCCAAATCCACTCACTTTCAGTTGTGTGCTTAGTGCGGCCGCCAGTGTGGCAATATTAAGCCAAGGGTTGCAGATCCATGCTCTTGTGACAAAGATGAGTATGGAGTATGATTTATCAATCCAAAATTCTTTAGTTTCCATGTATTCGAAGTGTGGAAATGTGGATGATGCATTGAAAATGTTTCATTACATCAAGGTTCCTAATGTTGTTACTTATAATTCCATTATCACTGGGCTGGCTCAAAATGGACTTGGGAAAGAAGCACTCAAGTTATTCATGAAAATGCAGGATGAATACGTGGTACCTAATCATATTACATTCCTAGGTGTCCTTTCAGCATGTGTCCATGTGGGACTTGTGGAAGAGGGGAGGAGATACTTTGATCTAATGAGATCATTGTATGGTATTCAACCTGAGCCTGATCATTATGCATGCTTGGTTGATCTTCTTTGCCGAGCTGGAATGTTCAATGAAGCAGTGAGTTTGATTTCTTCAATGCCATTTGACCCTCATCAAGGTGTTTGGGGAGCATTGCTCGGGGCAAGCTGGACCCACCTGCGTCTTGATGTTGCAGAGCTTGCAGCCCAAAATCTCTTTGAACTGGAACCTAATAGTGCAACACCTTACGTGGTTTTATCTAATTTACACTCTATTTCTGGTGATAAGAGGAAAAATGAGCTTATACGGTCGATGAAGATATCAAGAGGAATAAGGAAGAGTCCAGGTTGTAGTTGGATAATAGTTAAAGATAAAGTCCATCTATTCCATGCAGGAGATCAATCCCACAAAGACATCAAAGATATGACAGAAATTATATACACACTGGCAGCAGAAGTAGGAAGTGGAAGATATCATAAGAATGAAAAAATGTCAGAATTAGATTGATTCCTTGGGAATTACCATTGCATATTGGATGTATGGAACTTCGTCTCTGCCATGGATGCTCGTGTTTTGAGTGGAATATAGAAGATATCACCTTATGGGCATATATGAATTGATTAAGCAAGAAATTCATCTAGGTTGTGCTCAGTTCAGGAGCGGTTTGAGTGGAAGCCATTCTTAATTCTTAAGAGCTAAAGTTGTACATTTAGAAAATCTAATAGTTTAATCTTTCCACCCCCTGGAAGAAGTGAGCATTCCTTCACTTTTTCGGTACCTGGAGCACTACAATTGGCCTAAGACATATTTTTGGAAATTGAAGTCCATGTCGGGGTACCAAGCACCAGCATGATGAATCGACCAGCTAACATTGAATCCCATCGCTTTGTTTTCTAATGTGAGGTATCGAGATATGTTCCAAACTTTCTTGATAGCCTTTGTGAGTTGTGCCAAATCTTGCAGTTTAGCCTTTGCCTCATCAACCCTGGCTTGGACCGTTGACACTTGAGCTTTGAAGTTCAACATCATTCCTTGAAGCCCTAACACTTTTGCCTGAGCTACCTTCTGGAGCCTTTCAAAGTCACTTTCAGCCGGGTTGACTTAGCCTTGGAGTTATGCAACAGTTGATTGGCTCGAGCCAAGGAAGGCCACACTTGGTCAAACTCCTCATGTGAAACAAAATTCTGGCGCGAGGACTCTATTTCATCACCTAGCCTTGTAGAGGCGATGCTCAACCGTTAGAATGCTCACATGCTACAGAGGTATAATAGTTAGATCGGTTAGACAAACAAAGAAAATCAAGGTTGAGGTTCGCCAAAGGCACTCATGTGAGAATCAAGGTCGGGAACTGAAAAATCCCATTTTGAGCTCTATGCCCTTTGTTGGCTTAGTCGAGAAGTGCCCAATATTGTGATGCGACATCTCGGTTCTCCATATCTCTTCCAATTACAAAACTGTTTGATAGGGAAGTGGACTCTGGATGGGTGAGGATGAGCAACTGACATGAAGATAAGATCCACAACTTTTCTGCTAGTTACAAGGTTCTTTGGTAATGCTTGGCTTGTGCAATTATTGAACTATAGAAGATGGTTTACAATCGAGAAGAAGCTTTTGTAATATGTTTTACCGTTGTTTTCCAAGTATTTAGCTTTCTCTACCTTACCTGAATATTTGAACTTACCTATTTAGGCAACAGTCTGTGGGTGAAAAGAAGGTTGCAACGTAG

mRNA sequence

ATGGGTTATGTTCAATCTGGTAACGTGGAAAAAGCTTTTTCTCTATTTGAGAATATGCCACAAAAGGATGTGGTTTCCTGGACAACTTTGATTTCTGGATTTGCCAGCAAGGGGATGATTGATGAATCCATTGGTCTGTTTCAAATGATGCCTGAGAAGGATGATATTGCTTGGACTGCTGTAATCTCAGGGCTTGTGAGCAATCAGGAATATGAGATAGCTTTCCGTTGGTTTATTGAGATGCTTCAGAAAGTAGTCAAGCCAAATCCACTCACTTTCAGTTGTGTGCTTAGTGCGGCCGCCAGTGTGGCAATATTAAGCCAAGGGTTGCAGATCCATGCTCTTGTGACAAAGATGAGTATGGAGTATGATTTATCAATCCAAAATTCTTTAGTTTCCATGTATTCGAAGTGTGGAAATGTGGATGATGCATTGAAAATGTTTCATTACATCAAGGTTCCTAATGTTGTTACTTATAATTCCATTATCACTGGGCTGGCTCAAAATGGACTTGGGAAAGAAGCACTCAAGTTATTCATGAAAATGCAGGATGAATACGTGGTACCTAATCATATTACATTCCTAGGTGTCCTTTCAGCATGTGTCCATGTGGGACTTGTGGAAGAGGGGAGGAGATACTTTGATCTAATGAGATCATTGTATGGTATTCAACCTGAGCCTGATCATTATGCATGCTTGGTTGATCTTCTTTGCCGAGCTGGAATGTTCAATGAAGCAGTGAGTTTGATTTCTTCAATGCCATTTGACCCTCATCAAGGTGTTTGGGGAGCATTGCTCGGGGCAAGCTGGACCCACCTGCGTCTTGATGTTGCAGAGCTTGCAGCCCAAAATCTCTTTGAACTGGAACCTAATAGTGCAACACCTTACGTGGTTTTATCTAATTTACACTCTATTTCTGGTGATAAGAGGAAAAATGAGCTTATACGGTCGATGAAGATATCAAGAGGAATAAGGAAGAGTCCAGGAGATCAATCCCACAAAGACATCAAAGATATGACAGAAATTATATACACACTGGCAGCAGAATCTGTGGGTGAAAAGAAGGTTGCAACGTAG

Coding sequence (CDS)

ATGGGTTATGTTCAATCTGGTAACGTGGAAAAAGCTTTTTCTCTATTTGAGAATATGCCACAAAAGGATGTGGTTTCCTGGACAACTTTGATTTCTGGATTTGCCAGCAAGGGGATGATTGATGAATCCATTGGTCTGTTTCAAATGATGCCTGAGAAGGATGATATTGCTTGGACTGCTGTAATCTCAGGGCTTGTGAGCAATCAGGAATATGAGATAGCTTTCCGTTGGTTTATTGAGATGCTTCAGAAAGTAGTCAAGCCAAATCCACTCACTTTCAGTTGTGTGCTTAGTGCGGCCGCCAGTGTGGCAATATTAAGCCAAGGGTTGCAGATCCATGCTCTTGTGACAAAGATGAGTATGGAGTATGATTTATCAATCCAAAATTCTTTAGTTTCCATGTATTCGAAGTGTGGAAATGTGGATGATGCATTGAAAATGTTTCATTACATCAAGGTTCCTAATGTTGTTACTTATAATTCCATTATCACTGGGCTGGCTCAAAATGGACTTGGGAAAGAAGCACTCAAGTTATTCATGAAAATGCAGGATGAATACGTGGTACCTAATCATATTACATTCCTAGGTGTCCTTTCAGCATGTGTCCATGTGGGACTTGTGGAAGAGGGGAGGAGATACTTTGATCTAATGAGATCATTGTATGGTATTCAACCTGAGCCTGATCATTATGCATGCTTGGTTGATCTTCTTTGCCGAGCTGGAATGTTCAATGAAGCAGTGAGTTTGATTTCTTCAATGCCATTTGACCCTCATCAAGGTGTTTGGGGAGCATTGCTCGGGGCAAGCTGGACCCACCTGCGTCTTGATGTTGCAGAGCTTGCAGCCCAAAATCTCTTTGAACTGGAACCTAATAGTGCAACACCTTACGTGGTTTTATCTAATTTACACTCTATTTCTGGTGATAAGAGGAAAAATGAGCTTATACGGTCGATGAAGATATCAAGAGGAATAAGGAAGAGTCCAGGAGATCAATCCCACAAAGACATCAAAGATATGACAGAAATTATATACACACTGGCAGCAGAATCTGTGGGTGAAAAGAAGGTTGCAACGTAG

Protein sequence

MGYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAVISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSMEYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMKMQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAGMFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSNLHSISGDKRKNELIRSMKISRGIRKSPGDQSHKDIKDMTEIIYTLAAESVGEKKVAT

Homology

[Close]

BLAST of CcUC07G138100 vs. NCBI nr
Match: XP_038901813.1 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Benincasa hispida])

HSP 1 Score: 639.4 bits (1648), Expect = 1.8e-179
Identity = 322/372 (86.56%), Postives = 339/372 (91.13%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSGNVEKAF LFENMPQKDVVSWTTLISGFASKG IDESIGLFQMMP+KDDIAWTAV
Sbjct: 346 GYVQSGNVEKAFFLFENMPQKDVVSWTTLISGFASKGRIDESIGLFQMMPKKDDIAWTAV 405

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN EY  AFRWFIEMLQ+V+KPNP T SCVLSA A VAILSQGLQIHALVTKMSM
Sbjct: 406 ISGLVSNGEYATAFRWFIEMLQRVIKPNPFTLSCVLSAVAGVAILSQGLQIHALVTKMSM 465

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           EYDL+IQNSLVSMYSKCGNV DALKMF+YIKVPNVV YNSIITGLAQNGLGKEALKLF K
Sbjct: 466 EYDLTIQNSLVSMYSKCGNVADALKMFYYIKVPNVVAYNSIITGLAQNGLGKEALKLFTK 525

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQD+Y+VPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLY IQPEPDHYAC+VDLLCRAG
Sbjct: 526 MQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAG 585

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           MFNEAVSLISSMPFDPHQGVWGA+LGASWTHLRLDVAELAAQNLFE+EPNSAT YV+LSN
Sbjct: 586 MFNEAVSLISSMPFDPHQGVWGAMLGASWTHLRLDVAELAAQNLFEIEPNSATAYVILSN 645

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 358
           LHSISGDKRK+ELIRSMKISRGI+K+P                GDQSHKDIK+MTEIIYT
Sbjct: 646 LHSISGDKRKDELIRSMKISRGIKKTPGCSWIMVKDKVHLFHAGDQSHKDIKEMTEIIYT 705

[Close]

BLAST of CcUC07G138100 vs. NCBI nr
Match: KAG7015063.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 610.5 bits (1573), Expect = 9.1e-171
Identity = 302/364 (82.97%), Postives = 328/364 (90.11%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSG++EKAF LFENMPQKDVVSWTTLISGFASKGMID+SIGLFQMMPEKDDIAWTAV
Sbjct: 355 GYVQSGDIEKAFLLFENMPQKDVVSWTTLISGFASKGMIDKSIGLFQMMPEKDDIAWTAV 414

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN+EYE AF WFIEMLQK +KPNPLT SCVLSAAA VAILSQGLQ HALVTKMSM
Sbjct: 415 ISGLVSNEEYETAFHWFIEMLQKAIKPNPLTLSCVLSAAAGVAILSQGLQFHALVTKMSM 474

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           EYDLSIQNSLVSMYSKCGNV DAL+MF+YI+ PNVVTYNSIITGLAQNGLGKE+LKLF K
Sbjct: 475 EYDLSIQNSLVSMYSKCGNVGDALRMFYYIESPNVVTYNSIITGLAQNGLGKESLKLFTK 534

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQDEY+ PN ITFLGVLSACVHVG VEEG R+F+LM SLY IQP+ DHYAC+VDLLCRAG
Sbjct: 535 MQDEYLEPNQITFLGVLSACVHVGFVEEGWRFFNLMSSLYNIQPQVDHYACMVDLLCRAG 594

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           MFNEAV LISSMPFDPH+GVWGA+LGASWTHLRLDVAELAA NLFELEPNSATPYV+LSN
Sbjct: 595 MFNEAVELISSMPFDPHEGVWGAMLGASWTHLRLDVAELAAHNLFELEPNSATPYVILSN 654

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 350
           LHS+SGDKRK+E+IRSMKIS+GI+KSP                GD+SHKDI++MTEII+ 
Sbjct: 655 LHSVSGDKRKDEVIRSMKISKGIKKSPGCSWIIVKDKIHLFYAGDRSHKDIEEMTEIIHA 714

[Close]

BLAST of CcUC07G138100 vs. NCBI nr
Match: XP_022931275.1 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Cucurbita moschata])

HSP 1 Score: 610.5 bits (1573), Expect = 9.1e-171
Identity = 302/364 (82.97%), Postives = 327/364 (89.84%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSG++EKAF LFENMPQKDVVSWTTLISGFASKGMID+SIGLFQMMPEKDDIAWTAV
Sbjct: 355 GYVQSGDIEKAFLLFENMPQKDVVSWTTLISGFASKGMIDKSIGLFQMMPEKDDIAWTAV 414

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN+EYE AF WFIEMLQK +KPNPLT SCVLSAAA VAILSQGLQ HALVTKMSM
Sbjct: 415 ISGLVSNEEYETAFHWFIEMLQKAIKPNPLTLSCVLSAAAGVAILSQGLQFHALVTKMSM 474

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           EYDLSIQNSLVSMYSKCGNV DAL+MF+YI+ PNVVTYNSIITGLAQNGLGKE+LKLF K
Sbjct: 475 EYDLSIQNSLVSMYSKCGNVGDALRMFYYIEAPNVVTYNSIITGLAQNGLGKESLKLFTK 534

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQDEY+ PN ITFLGVLSACVHVG VEEG RYF+LM SLY IQP+ DHYAC+VDLLCRAG
Sbjct: 535 MQDEYLEPNQITFLGVLSACVHVGFVEEGWRYFNLMSSLYNIQPQVDHYACMVDLLCRAG 594

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
            FNEAV LISSMPFDPH+GVWGA+LGASWTHLRLDVAELAA NLFELEPNSATPYV+LSN
Sbjct: 595 RFNEAVDLISSMPFDPHEGVWGAMLGASWTHLRLDVAELAAHNLFELEPNSATPYVILSN 654

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 350
           LHS+SGDKRK+E+IRSMKIS+GI+KSP                GD+SHKDI++MTEII+ 
Sbjct: 655 LHSVSGDKRKDEVIRSMKISKGIKKSPGCSWIIVKDKIHLFYAGDRSHKDIEEMTEIIHA 714

[Close]

BLAST of CcUC07G138100 vs. NCBI nr
Match: XP_023552568.1 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 608.2 bits (1567), Expect = 4.5e-170
Identity = 301/364 (82.69%), Postives = 326/364 (89.56%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSG++EKAF LFENMPQKDVVSWTTLISGFASKGMID+SIGLFQMMPEKDDIAWTAV
Sbjct: 355 GYVQSGDIEKAFFLFENMPQKDVVSWTTLISGFASKGMIDKSIGLFQMMPEKDDIAWTAV 414

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN+EYE AF WFIEMLQK +KPNPLT SCVLSAAA VAILSQGLQ HALVTKMSM
Sbjct: 415 ISGLVSNEEYETAFHWFIEMLQKAIKPNPLTLSCVLSAAAGVAILSQGLQFHALVTKMSM 474

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           EYDLSIQNSLVSMYSKCGNV DAL+MF+YI+ PNVVTYNSIITGLAQNGLGKE+LKLF K
Sbjct: 475 EYDLSIQNSLVSMYSKCGNVGDALRMFYYIEAPNVVTYNSIITGLAQNGLGKESLKLFTK 534

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQDEY+ PN ITFLGVLSACVHVG VEEG R+F+LM SLY IQP  DHYAC+VDLLCRAG
Sbjct: 535 MQDEYLEPNQITFLGVLSACVHVGFVEEGWRFFNLMSSLYNIQPHVDHYACMVDLLCRAG 594

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
            FNEAV LISSMPFDPH+GVWGA+LGASWTHLRLDVAELAA NLFELEPNSATPYV+LSN
Sbjct: 595 RFNEAVDLISSMPFDPHEGVWGAMLGASWTHLRLDVAELAAHNLFELEPNSATPYVILSN 654

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 350
           LHS+SGDKRK+E+IRSMKIS+GI+KSP                GD+SHKDI++MTEII+ 
Sbjct: 655 LHSVSGDKRKDEVIRSMKISKGIKKSPGCSWIIVKDKIHLFYAGDRSHKDIEEMTEIIHA 714

[Close]

BLAST of CcUC07G138100 vs. NCBI nr
Match: XP_022142925.1 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Momordica charantia])

HSP 1 Score: 604.0 bits (1556), Expect = 8.5e-169
Identity = 301/364 (82.69%), Postives = 328/364 (90.11%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSGNVEKA+ LFENMPQKDVVSWTTLI+GFASKGM+D+SIGLFQMMPEKDDIAWTAV
Sbjct: 346 GYVQSGNVEKAYLLFENMPQKDVVSWTTLITGFASKGMVDKSIGLFQMMPEKDDIAWTAV 405

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN+EYE AF WFI+MLQK +KPNPLT SCVLSAAA VAILSQGLQ+HALVTKMSM
Sbjct: 406 ISGLVSNEEYEAAFHWFIQMLQKAIKPNPLTLSCVLSAAAGVAILSQGLQVHALVTKMSM 465

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           E DLSIQNSLVSMYSKCGNV DAL+MF+YI+VPNVVTYNSIITGLAQNGLGKEALKLF K
Sbjct: 466 ESDLSIQNSLVSMYSKCGNVADALRMFNYIEVPNVVTYNSIITGLAQNGLGKEALKLFTK 525

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           M+DEY+ PN ITFLGVLSACVHVGLVE+G RYF+ MRSL  IQPE DHYAC+VDLLCRAG
Sbjct: 526 MKDEYLEPNQITFLGVLSACVHVGLVEKGWRYFESMRSLCNIQPEADHYACMVDLLCRAG 585

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           MFNEAV LISSMPFDPHQGVWGA+LGASWTHLRLDVAELAA+NLFELEPN+ATPYVVLSN
Sbjct: 586 MFNEAVHLISSMPFDPHQGVWGAMLGASWTHLRLDVAELAARNLFELEPNNATPYVVLSN 645

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 350
           LHSISGDK+++ELIRSMKIS+GI+KSP                GD+SHKDIK+MT+II  
Sbjct: 646 LHSISGDKKEDELIRSMKISKGIKKSPGCSWIVIKDKVHLFHAGDRSHKDIKEMTQIICI 705

[Close]

BLAST of CcUC07G138100 vs. ExPASy Swiss-Prot
Match: Q9C8L6 (Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E63 PE=2 SV=2)

HSP 1 Score: 382.5 bits (981), Expect = 5.3e-105
Identity = 191/328 (58.23%), Postives = 242/328 (73.78%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           G VQ   + +A+ LFE MP KD+VSWT +I GF+ KG I + + LF MMPEKD+I WTA+
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           IS  VSN  YE A  WF +MLQK V PN  TFS VLSA AS+A L +GLQIH  V KM++
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
             DLS+QNSLVSMY KCGN +DA K+F  I  PN+V+YN++I+G + NG GK+ALKLF  
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           ++     PN +TFL +LSACVHVG V+ G +YF  M+S Y I+P PDHYAC+VDLL R+G
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSG 589

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           + ++A +LIS+MP  PH GVWG+LL AS THLR+D+AELAA+ L ELEP+SATPYVVLS 
Sbjct: 590 LLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQ 649

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSPG 330
           L+SI G  R  + I ++K S+ I+K PG
Sbjct: 650 LYSIIGKNRDCDRIMNIKKSKRIKKDPG 677

[Close]

BLAST of CcUC07G138100 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 6.7e-68
Identity = 129/328 (39.33%), Postives = 202/328 (61.59%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQ   +E A  LF+ MP ++V +W T+I+G+A  G I E+  LF  MP++D ++W A+
Sbjct: 321 GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           I+G   +     A R F++M ++  + N  +FS  LS  A V  L  G Q+H  + K   
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           E    + N+L+ MY KCG++++A  +F  +   ++V++N++I G +++G G+ AL+ F  
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 500

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           M+ E + P+  T + VLSAC H GLV++GR+YF  M   YG+ P   HYAC+VDLL RAG
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           +  +A +L+ +MPF+P   +WG LLGAS  H   ++AE AA  +F +EP ++  YV+LSN
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 620

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSPG 330
           L++ SG       +R     +G++K PG
Sbjct: 621 LYASSGRWGDVGKLRVRMRDKGVKKVPG 648

[Close]

BLAST of CcUC07G138100 vs. ExPASy Swiss-Prot
Match: Q56XI1 (Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H18 PE=1 SV=2)

HSP 1 Score: 257.7 bits (657), Expect = 2.0e-67
Identity = 135/330 (40.91%), Postives = 203/330 (61.52%), Query Frame = 0


Query: 1   MGYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTA 60
           MGYVQ+G +E A  LFE MP K V++   +ISG   KG I ++  +F  M E++D +W  
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301

Query: 61  VISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMS 120
           VI     N     A   FI M ++ V+P   T   +LS  AS+A L  G Q+HA + +  
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361

Query: 121 MEYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFM 180
            + D+ + + L++MY KCG +  +  +F      +++ +NSII+G A +GLG+EALK+F 
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421

Query: 181 KMQ-DEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCR 240
           +M       PN +TF+  LSAC + G+VEEG + ++ M S++G++P   HYAC+VD+L R
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481

Query: 241 AGMFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVL 300
           AG FNEA+ +I SM  +P   VWG+LLGA  TH +LDVAE  A+ L E+EP ++  Y++L
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541

Query: 301 SNLHSISGDKRKNELIRSMKISRGIRKSPG 330
           SN+++  G       +R +  +R +RKSPG
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPG 571

[Close]

BLAST of CcUC07G138100 vs. ExPASy Swiss-Prot
Match: Q9FFG8 (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H17 PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 9.7e-67
Identity = 132/330 (40.00%), Postives = 210/330 (63.64%), Query Frame = 0


Query: 3   YVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAVI 62
           YV+  +++ A  +F+ MP++DV+SWT LI+ +A  G ++ +  LF+ +P KD +AWTA++
Sbjct: 194 YVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMV 253

Query: 63  SGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVA---ILSQGLQIHALVTKM 122
           +G   N + + A  +F  M +  ++ + +T +  +SA A +       + +QI A  +  
Sbjct: 254 TGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI-AQKSGY 313

Query: 123 SMEYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLF 182
           S    + I ++L+ MYSKCGNV++A+ +F  +   NV TY+S+I GLA +G  +EAL LF
Sbjct: 314 SPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLF 373

Query: 183 MKMQDE-YVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLC 242
             M  +  + PN +TF+G L AC H GLV++GR+ FD M   +G+QP  DHY C+VDLL 
Sbjct: 374 HYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLG 433

Query: 243 RAGMFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVV 302
           R G   EA+ LI +M  +PH GVWGALLGA   H   ++AE+AA++LFELEP+    Y++
Sbjct: 434 RTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYIL 493

Query: 303 LSNLHSISGDKRKNELIRSMKISRGIRKSP 329
           LSN+++ +GD      +R +   +G++K+P
Sbjct: 494 LSNVYASAGDWGGVLRVRKLIKEKGLKKTP 522

[Close]

BLAST of CcUC07G138100 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 3.7e-66
Identity = 133/332 (40.06%), Postives = 199/332 (59.94%), Query Frame = 0


Query: 3   YVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMP--EKDDIAWTA 62
           Y   G +  A  +F+ M  KDV  W  L++G+   G +DE+  L +MMP   +++++WT 
Sbjct: 161 YFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTC 220

Query: 63  VISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMS 122
           VISG   +     A   F  ML + V+P+ +T   VLSA A +  L  G +I + V    
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG 280

Query: 123 MEYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFM 182
           M   +S+ N+++ MY+K GN+  AL +F  +   NVVT+ +II GLA +G G EAL +F 
Sbjct: 281 MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFN 340

Query: 183 KMQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRA 242
           +M    V PN +TF+ +LSAC HVG V+ G+R F+ MRS YGI P  +HY C++DLL RA
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400

Query: 243 GMFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLS 302
           G   EA  +I SMPF  +  +WG+LL AS  H  L++ E A   L +LEPN++  Y++L+
Sbjct: 401 GKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLA 460

Query: 303 NLHSISGDKRKNELIRSMKISRGIRKSPGDQS 333
           NL+S  G   ++ ++R+M    G++K  G+ S
Sbjct: 461 NLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492

[Close]

BLAST of CcUC07G138100 vs. ExPASy TrEMBL
Match: A0A6J1EZ02 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111437505 PE=4 SV=1)

HSP 1 Score: 610.5 bits (1573), Expect = 4.4e-171
Identity = 302/364 (82.97%), Postives = 327/364 (89.84%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSG++EKAF LFENMPQKDVVSWTTLISGFASKGMID+SIGLFQMMPEKDDIAWTAV
Sbjct: 355 GYVQSGDIEKAFLLFENMPQKDVVSWTTLISGFASKGMIDKSIGLFQMMPEKDDIAWTAV 414

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN+EYE AF WFIEMLQK +KPNPLT SCVLSAAA VAILSQGLQ HALVTKMSM
Sbjct: 415 ISGLVSNEEYETAFHWFIEMLQKAIKPNPLTLSCVLSAAAGVAILSQGLQFHALVTKMSM 474

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           EYDLSIQNSLVSMYSKCGNV DAL+MF+YI+ PNVVTYNSIITGLAQNGLGKE+LKLF K
Sbjct: 475 EYDLSIQNSLVSMYSKCGNVGDALRMFYYIEAPNVVTYNSIITGLAQNGLGKESLKLFTK 534

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQDEY+ PN ITFLGVLSACVHVG VEEG RYF+LM SLY IQP+ DHYAC+VDLLCRAG
Sbjct: 535 MQDEYLEPNQITFLGVLSACVHVGFVEEGWRYFNLMSSLYNIQPQVDHYACMVDLLCRAG 594

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
            FNEAV LISSMPFDPH+GVWGA+LGASWTHLRLDVAELAA NLFELEPNSATPYV+LSN
Sbjct: 595 RFNEAVDLISSMPFDPHEGVWGAMLGASWTHLRLDVAELAAHNLFELEPNSATPYVILSN 654

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 350
           LHS+SGDKRK+E+IRSMKIS+GI+KSP                GD+SHKDI++MTEII+ 
Sbjct: 655 LHSVSGDKRKDEVIRSMKISKGIKKSPGCSWIIVKDKIHLFYAGDRSHKDIEEMTEIIHA 714

[Close]

BLAST of CcUC07G138100 vs. ExPASy TrEMBL
Match: A0A6J1J5D5 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111482772 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 4.1e-169
Identity = 298/364 (81.87%), Postives = 325/364 (89.29%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSG++EKAF LFENMPQKDVVSWTTLISGFASKGMID+SIGLFQMMPEKDDIAWTAV
Sbjct: 355 GYVQSGDIEKAFLLFENMPQKDVVSWTTLISGFASKGMIDKSIGLFQMMPEKDDIAWTAV 414

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN+EYE AF WFIEMLQK +KPNPLT SCVLSAAA VAILSQGLQ HALVTK+SM
Sbjct: 415 ISGLVSNEEYETAFHWFIEMLQKAIKPNPLTLSCVLSAAAGVAILSQGLQFHALVTKLSM 474

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           EYDLSIQNSLVSMYSKCGNV DAL+MF+YI+ PNVVTYNSIITGLAQNGLGKE+LKLF K
Sbjct: 475 EYDLSIQNSLVSMYSKCGNVGDALRMFYYIEAPNVVTYNSIITGLAQNGLGKESLKLFTK 534

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQDEY+ PN ITFLGVLSACVHVG VEEG R+F+LM SLY IQP+ DHYAC+VDLLCRAG
Sbjct: 535 MQDEYLEPNQITFLGVLSACVHVGFVEEGWRFFNLMSSLYNIQPQVDHYACMVDLLCRAG 594

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
            FNEAV LIS MPFDPH+GVWGA+LGASWTHLRLDVAELAA NLFELEPNSATPYV+LSN
Sbjct: 595 RFNEAVDLISLMPFDPHEGVWGAMLGASWTHLRLDVAELAAHNLFELEPNSATPYVILSN 654

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 350
           LH++SGDKRK+E+IRSMKIS+GI+KSP                GD+SHKDIK+MTEII+ 
Sbjct: 655 LHAVSGDKRKDEVIRSMKISKGIKKSPGCSWIIVKDKIHLFYAGDRSHKDIKEMTEIIHA 714

[Close]

BLAST of CcUC07G138100 vs. ExPASy TrEMBL
Match: A0A6J1CMA8 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111012917 PE=4 SV=1)

HSP 1 Score: 604.0 bits (1556), Expect = 4.1e-169
Identity = 301/364 (82.69%), Postives = 328/364 (90.11%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSGNVEKA+ LFENMPQKDVVSWTTLI+GFASKGM+D+SIGLFQMMPEKDDIAWTAV
Sbjct: 346 GYVQSGNVEKAYLLFENMPQKDVVSWTTLITGFASKGMVDKSIGLFQMMPEKDDIAWTAV 405

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVSN+EYE AF WFI+MLQK +KPNPLT SCVLSAAA VAILSQGLQ+HALVTKMSM
Sbjct: 406 ISGLVSNEEYEAAFHWFIQMLQKAIKPNPLTLSCVLSAAAGVAILSQGLQVHALVTKMSM 465

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           E DLSIQNSLVSMYSKCGNV DAL+MF+YI+VPNVVTYNSIITGLAQNGLGKEALKLF K
Sbjct: 466 ESDLSIQNSLVSMYSKCGNVADALRMFNYIEVPNVVTYNSIITGLAQNGLGKEALKLFTK 525

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           M+DEY+ PN ITFLGVLSACVHVGLVE+G RYF+ MRSL  IQPE DHYAC+VDLLCRAG
Sbjct: 526 MKDEYLEPNQITFLGVLSACVHVGLVEKGWRYFESMRSLCNIQPEADHYACMVDLLCRAG 585

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           MFNEAV LISSMPFDPHQGVWGA+LGASWTHLRLDVAELAA+NLFELEPN+ATPYVVLSN
Sbjct: 586 MFNEAVHLISSMPFDPHQGVWGAMLGASWTHLRLDVAELAARNLFELEPNNATPYVVLSN 645

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 350
           LHSISGDK+++ELIRSMKIS+GI+KSP                GD+SHKDIK+MT+II  
Sbjct: 646 LHSISGDKKEDELIRSMKISKGIKKSPGCSWIVIKDKVHLFHAGDRSHKDIKEMTQIICI 705

[Close]

BLAST of CcUC07G138100 vs. ExPASy TrEMBL
Match: A0A0A0KMZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G359160 PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 4.6e-168
Identity = 303/372 (81.45%), Postives = 329/372 (88.44%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSGN+EKA  LFENMPQKDVVSWTTLI GFAS+G IDE IGLFQMMPEKD IAWTAV
Sbjct: 341 GYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTAV 400

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVS +EYEIAF WFI+MLQ V+KPN  T SCVLSA AS+AIL+QGLQIHA+VTKMSM
Sbjct: 401 ISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMSM 460

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           E DLSIQNSLVSMYSKCGNVDDALKMF+YIKVPNVV YN+IITGLAQNGLGKEAL++F K
Sbjct: 461 ENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALEIFTK 520

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQD+Y+VPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLY IQPEPDHYAC+VDLLCRAG
Sbjct: 521 MQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLCRAG 580

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           MF+EAVSL+SSMPFDPHQGVWGA+LGASWTHLRLDVAELAAQNLFELEPNSATPYV+LSN
Sbjct: 581 MFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSN 640

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 358
           LHSISGD+RK+ELIR MK SRG++KSP                G QS K+IK+MTEIIY 
Sbjct: 641 LHSISGDERKHELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGHQSIKNIKEMTEIIYA 700

[Close]

BLAST of CcUC07G138100 vs. ExPASy TrEMBL
Match: A0A1S4E5G3 (pentatricopeptide repeat-containing protein At1g53600, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503376 PE=4 SV=1)

HSP 1 Score: 593.6 bits (1529), Expect = 5.6e-166
Identity = 302/369 (81.84%), Postives = 323/369 (87.53%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQSGN+EKA  LFE MPQKDVVSWTTLI GFASKG IDE I LFQM PEKD I WTAV
Sbjct: 362 GYVQSGNLEKAVFLFEKMPQKDVVSWTTLICGFASKGRIDEFISLFQMTPEKDAITWTAV 421

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           ISGLVS +EYEIAFRWFI+M Q V+KPN  T SCVLSAAAS+AIL+QGLQIHA+VTKMS+
Sbjct: 422 ISGLVSIEEYEIAFRWFIKMFQSVIKPNAFTLSCVLSAAASMAILNQGLQIHAIVTKMSL 481

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           E DLSIQNSLVSMYSKCGNVDDALKMF+YIKVPNVV YN+IITGLAQNGLGKEALKLF K
Sbjct: 482 ENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQNGLGKEALKLFTK 541

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           MQD+Y+VPNHITFLGVLSACVHVGLVEEGRRYF LMRS Y IQPEPDHYAC+VDLLCRAG
Sbjct: 542 MQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFGLMRSFYDIQPEPDHYACMVDLLCRAG 601

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           MF+EAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYV+LSN
Sbjct: 602 MFDEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVILSN 661

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSP----------------GDQSHKDIKDMTEIIYT 355
           LHSISGDKRK+ELIR MK SRG++KSP                G QS K+IK+MTEI+  
Sbjct: 662 LHSISGDKRKHELIRLMKKSRGLKKSPGCSWIILKDEVHLFHAGRQSIKNIKEMTEILCA 721

[Close]

BLAST of CcUC07G138100 vs. TAIR 10
Match: AT1G53600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 382.5 bits (981), Expect = 3.8e-106
Identity = 191/328 (58.23%), Postives = 242/328 (73.78%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           G VQ   + +A+ LFE MP KD+VSWT +I GF+ KG I + + LF MMPEKD+I WTA+
Sbjct: 350 GLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAM 409

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           IS  VSN  YE A  WF +MLQK V PN  TFS VLSA AS+A L +GLQIH  V KM++
Sbjct: 410 ISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNI 469

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
             DLS+QNSLVSMY KCGN +DA K+F  I  PN+V+YN++I+G + NG GK+ALKLF  
Sbjct: 470 VNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSM 529

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           ++     PN +TFL +LSACVHVG V+ G +YF  M+S Y I+P PDHYAC+VDLL R+G
Sbjct: 530 LESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSG 589

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           + ++A +LIS+MP  PH GVWG+LL AS THLR+D+AELAA+ L ELEP+SATPYVVLS 
Sbjct: 590 LLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQ 649

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSPG 330
           L+SI G  R  + I ++K S+ I+K PG
Sbjct: 650 LYSIIGKNRDCDRIMNIKKSKRIKKDPG 677

[Close]

BLAST of CcUC07G138100 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 4.8e-69
Identity = 129/328 (39.33%), Postives = 202/328 (61.59%), Query Frame = 0


Query: 2   GYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAV 61
           GYVQ   +E A  LF+ MP ++V +W T+I+G+A  G I E+  LF  MP++D ++W A+
Sbjct: 321 GYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380

Query: 62  ISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMSM 121
           I+G   +     A R F++M ++  + N  +FS  LS  A V  L  G Q+H  + K   
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGY 440

Query: 122 EYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFMK 181
           E    + N+L+ MY KCG++++A  +F  +   ++V++N++I G +++G G+ AL+ F  
Sbjct: 441 ETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFES 500

Query: 182 MQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRAG 241
           M+ E + P+  T + VLSAC H GLV++GR+YF  M   YG+ P   HYAC+VDLL RAG
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560

Query: 242 MFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLSN 301
           +  +A +L+ +MPF+P   +WG LLGAS  H   ++AE AA  +F +EP ++  YV+LSN
Sbjct: 561 LLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSN 620

Query: 302 LHSISGDKRKNELIRSMKISRGIRKSPG 330
           L++ SG       +R     +G++K PG
Sbjct: 621 LYASSGRWGDVGKLRVRMRDKGVKKVPG 648

[Close]

BLAST of CcUC07G138100 vs. TAIR 10
Match: AT1G09410.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 257.7 bits (657), Expect = 1.4e-68
Identity = 135/330 (40.91%), Postives = 203/330 (61.52%), Query Frame = 0


Query: 1   MGYVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTA 60
           MGYVQ+G +E A  LFE MP K V++   +ISG   KG I ++  +F  M E++D +W  
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301

Query: 61  VISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMS 120
           VI     N     A   FI M ++ V+P   T   +LS  AS+A L  G Q+HA + +  
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361

Query: 121 MEYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFM 180
            + D+ + + L++MY KCG +  +  +F      +++ +NSII+G A +GLG+EALK+F 
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421

Query: 181 KMQ-DEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCR 240
           +M       PN +TF+  LSAC + G+VEEG + ++ M S++G++P   HYAC+VD+L R
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481

Query: 241 AGMFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVL 300
           AG FNEA+ +I SM  +P   VWG+LLGA  TH +LDVAE  A+ L E+EP ++  Y++L
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541

Query: 301 SNLHSISGDKRKNELIRSMKISRGIRKSPG 330
           SN+++  G       +R +  +R +RKSPG
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPG 571

[Close]

BLAST of CcUC07G138100 vs. TAIR 10
Match: AT5G44230.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 255.4 bits (651), Expect = 6.9e-68
Identity = 132/330 (40.00%), Postives = 210/330 (63.64%), Query Frame = 0


Query: 3   YVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMPEKDDIAWTAVI 62
           YV+  +++ A  +F+ MP++DV+SWT LI+ +A  G ++ +  LF+ +P KD +AWTA++
Sbjct: 194 YVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMV 253

Query: 63  SGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVA---ILSQGLQIHALVTKM 122
           +G   N + + A  +F  M +  ++ + +T +  +SA A +       + +QI A  +  
Sbjct: 254 TGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI-AQKSGY 313

Query: 123 SMEYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLF 182
           S    + I ++L+ MYSKCGNV++A+ +F  +   NV TY+S+I GLA +G  +EAL LF
Sbjct: 314 SPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLF 373

Query: 183 MKMQDE-YVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLC 242
             M  +  + PN +TF+G L AC H GLV++GR+ FD M   +G+QP  DHY C+VDLL 
Sbjct: 374 HYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLG 433

Query: 243 RAGMFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVV 302
           R G   EA+ LI +M  +PH GVWGALLGA   H   ++AE+AA++LFELEP+    Y++
Sbjct: 434 RTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYIL 493

Query: 303 LSNLHSISGDKRKNELIRSMKISRGIRKSP 329
           LSN+++ +GD      +R +   +G++K+P
Sbjct: 494 LSNVYASAGDWGGVLRVRKLIKEKGLKKTP 522

[Close]

BLAST of CcUC07G138100 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 253.4 bits (646), Expect = 2.6e-67
Identity = 133/332 (40.06%), Postives = 199/332 (59.94%), Query Frame = 0


Query: 3   YVQSGNVEKAFSLFENMPQKDVVSWTTLISGFASKGMIDESIGLFQMMP--EKDDIAWTA 62
           Y   G +  A  +F+ M  KDV  W  L++G+   G +DE+  L +MMP   +++++WT 
Sbjct: 161 YFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTC 220

Query: 63  VISGLVSNQEYEIAFRWFIEMLQKVVKPNPLTFSCVLSAAASVAILSQGLQIHALVTKMS 122
           VISG   +     A   F  ML + V+P+ +T   VLSA A +  L  G +I + V    
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG 280

Query: 123 MEYDLSIQNSLVSMYSKCGNVDDALKMFHYIKVPNVVTYNSIITGLAQNGLGKEALKLFM 182
           M   +S+ N+++ MY+K GN+  AL +F  +   NVVT+ +II GLA +G G EAL +F 
Sbjct: 281 MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFN 340

Query: 183 KMQDEYVVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYGIQPEPDHYACLVDLLCRA 242
           +M    V PN +TF+ +LSAC HVG V+ G+R F+ MRS YGI P  +HY C++DLL RA
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400

Query: 243 GMFNEAVSLISSMPFDPHQGVWGALLGASWTHLRLDVAELAAQNLFELEPNSATPYVVLS 302
           G   EA  +I SMPF  +  +WG+LL AS  H  L++ E A   L +LEPN++  Y++L+
Sbjct: 401 GKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLA 460

Query: 303 NLHSISGDKRKNELIRSMKISRGIRKSPGDQS 333
           NL+S  G   ++ ++R+M    G++K  G+ S
Sbjct: 461 NLYSNLGRWDESRMMRNMMKGIGVKKMAGESS 492

The following BLAST results are available for this feature:

BLAST of CcUC07G138100 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901813.1	1.8e-179	86.56	pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Benincasa ...	[more]
KAG7015063.1	9.1e-171	82.97	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022931275.1	9.1e-171	82.97	pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Cucurbita ...	[more]
XP_023552568.1	4.5e-170	82.69	pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Cucurbita ...	[more]
XP_022142925.1	8.5e-169	82.69	pentatricopeptide repeat-containing protein At1g53600, mitochondrial [Momordica ...	[more]

BLAST of CcUC07G138100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8L6	5.3e-105	58.23	Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidop...	[more]
Q9SY02	6.7e-68	39.33	Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX...	[more]
Q56XI1	2.0e-67	40.91	Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidop...	[more]
Q9FFG8	9.7e-67	40.00	Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana OX...	[more]
Q9FMA1	3.7e-66	40.06	Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC07G138100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EZ02	4.4e-171	82.97	pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Cucurbit...	[more]
A0A6J1J5D5	4.1e-169	81.87	pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Cucurbit...	[more]
A0A6J1CMA8	4.1e-169	82.69	pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Momordic...	[more]
A0A0A0KMZ5	4.6e-168	81.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G359160 PE=4 SV=1	[more]
A0A1S4E5G3	5.6e-166	81.84	pentatricopeptide repeat-containing protein At1g53600, mitochondrial isoform X2 ...	[more]

BLAST of CcUC07G138100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53600.1	3.8e-106	58.23	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02750.1	4.8e-69	39.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G09410.1	1.4e-68	40.91	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G44230.1	6.9e-68	40.00	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G56310.1	2.6e-67	40.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 230..253 e-value: 0.0091 score: 16.2 coord: 129..151 e-value: 0.001 score: 19.1 coord: 25..53 e-value: 4.6E-7 score: 29.6 coord: 2..23 e-value: 0.0016 score: 18.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 193..225 e-value: 7.1E-4 score: 17.6 coord: 57..89 e-value: 6.2E-4 score: 17.8 coord: 25..53 e-value: 2.8E-5 score: 22.0 coord: 128..150 e-value: 0.001 score: 17.1 coord: 230..253 e-value: 6.5E-4 score: 17.7 coord: 157..190 e-value: 1.4E-6 score: 26.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 154..202 e-value: 1.4E-13 score: 50.8 coord: 54..100 e-value: 5.0E-10 score: 39.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 23..57 score: 10.106377
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 155..189 score: 11.783455
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 154..342 e-value: 1.3E-30 score: 108.9 coord: 1..152 e-value: 5.8E-29 score: 103.4
None	No IPR available	PANTHER	PTHR47929	FAMILY NOT NAMED	coord: 3..53 coord: 46..329

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G138100.1	CcUC07G138100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004672	protein kinase activity