CcUC07G137280 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G137280
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Location	CicolChr07: 22495108 .. 22497228 (+)
RNA-Seq Expression	CcUC07G137280
Synteny	CcUC07G137280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTACCCAGCTGTGAAATACAAACAAAACTCTTCCTTCTTCATTTTGGAATGAAACAGAGTTGAGAGAAAAGAAAGAAGAGGATGTTAAAAAACTGGTTCCGCCATGGCTACAACAAGGTGGCTAAGACGAGGTTGGCGGAGAAGGAAAAGTTTGGAGTATTACAAGCCCATCCTGCGGCTCAGAGACATGCAGAAGAAGCCATGGAAGCTCATGCTGAAAAGCAGACCAAGCTTAAATCCAATCAAAAGGAGTTCAAAATTTATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTCCTTCAATCTTTCTTTGTTGATCTCTCTAAATGTGGTCCTATGGTACACTCTTCCACCCTCTAGTGGCATTTTAAAAGTATGTTATGAGCATGTAACAAATAGATTTATTAAGAGTGGTGGTGGCCATGGTGATCTGTAGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAGGAAGACTCGAGCTTGAGCTATAGAAGGTCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTGGCCTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTGTAACTCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTGATCTCTCATCTTACTTTTTATATTTTACCTTAAGCTTTTCGGTTCCATGTTGAATTAACGTGTCTAGTATCATAATTCAATTCTTTATAATGTCGTTTCCTTTTATATTAATATATATTTACTTTTGTAACTATGAGAAATGTTTAGGATTCCATATTGCAAAAATATGACTGCAAAGACGCTTTGTCGTAAGGATATTGTTACTTCTTTCATTACCCATTGGTTTGCAAGATGAAACTTTATGATGTCAGAGCCAATTGATGCGGGTCAAAAAAAATCCAACCCCACAATAATATTACCCATGTCTTCAGAATCCTTGTGATATTATTGTTCTTAACCATAATGTGGCATGTTAGAAAAGAGTACATGTTTGTGATATCATTGATTGAATGAGAGCATCATTTCTTTTCCCCTAAGCTGCCTAGAGTTTGATGCCATATATAGGTCGATTGAGCCATGGCTGAAGACTAGAAGATCGCCAGAGGACGGGCGAGAGTTTAGGCAATCTCAGGCAGAGAGGAAGAAGCTAGATGGGTTGTATGAGTGTATTCTTTGTGCTTGTTGCAGTGCTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATCGATGGATCTCTGATAGGTAATTCAACTTTCTCCTGGTTTACATTTGGTTTCAATATCTTCATTTCCCAATTAATCATTTATTTTAAAGAACCTTAAACAAATGGATATTTGAAGGCATTGAAAACTAGTGTATACATAAAGAATATTTGAAGTTAATTGTATGTGAGGTTAAATCTGACTAGTAAGTAATCTCCTAATAGGTAGAATGGACATATTTTGGTCCCTAGCTATACTTTTAAGTTTTTAACTAGTCTCTCAATAAATTTTAAAATTAGTATGAGAAGATGATGTGAGGTTTAAAGTTGATTAAAATGGTAGTCGAGATGAGTTCGAGAAGGAACGATTGCAAGCAATAGTGGAAGACGACACAAAGCTTTATAGATGCAGAACCGTAAAGAACTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCTCTGCCATTCACCACATGAAGGCAATGCATTTGATCTCTAAATCCAATATTAAGCTACCCAACAATTAGCTTTTCTACCTTTTTCTGTTCTCTGAAATCATATCATAATATATGCATCTCTTTTTCGTGGGCTTCAAACTTCATTTTCAATCTTAATCTGTGAAGAAAGGTATCAATAATTCGTTACAATCAAGTAGTAGTGCTGACTTTGATTTTTCAGTGTTCTTTATTGTATCTTGTTGGGTTATACTCAACTGCTACACTTTCCACAGCATTAAGTTCGAGCGAGTTATGAACTGTTTGAATCGGATTGAGAGAGTATTAAATTTTTTATCATAAGCTTTGTAGCACAAACTAGGCGTAG

mRNA sequence

CATTACCCAGCTGTGAAATACAAACAAAACTCTTCCTTCTTCATTTTGGAATGAAACAGAGTTGAGAGAAAAGAAAGAAGAGGATGTTAAAAAACTGGTTCCGCCATGGCTACAACAAGGTGGCTAAGACGAGGTTGGCGGAGAAGGAAAAGTTTGGAGTATTACAAGCCCATCCTGCGGCTCAGAGACATGCAGAAGAAGCCATGGAAGCTCATGCTGAAAAGCAGACCAAGCTTAAATCCAATCAAAAGGAGTTCAAAATTTATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTCCTTCAATCTTTCTTTGTTGATCTCTCTAAATGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAGGAAGACTCGAGCTTGAGCTATAGAAGGTCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTGGCCTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTGTAACTCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCGATTGAGCCATGGCTGAAGACTAGAAGATCGCCAGAGGACGGGCGAGAGTTTAGGCAATCTCAGGCAGAGAGGAAGAAGCTAGATGGGTTGTATGAGTGTATTCTTTGTGCTTGTTGCAGTGCTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATCGATGGATCTCTGATAGTCGAGATGAGTTCGAGAAGGAACGATTGCAAGCAATAGTGGAAGACGACACAAAGCTTTATAGATGCAGAACCGTAAAGAACTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCTCTGCCATTCACCACATGAAGGCAATGCATTTGATCTCTAAATCCAATATTAAGCTACCCAACAATTAGCTTTTCTACCTTTTTCTGTTCTCTGAAATCATATCATAATATATGCATCTCTTTTTCGTGGGCTTCAAACTTCATTTTCAATCTTAATCTGTGAAGAAAGGTATCAATAATTCGTTACAATCAAGTAGTAGTGCTGACTTTGATTTTTCAGTGTTCTTTATTGTATCTTGTTGGGTTATACTCAACTGCTACACTTTCCACAGCATTAAGTTCGAGCGAGTTATGAACTGTTTGAATCGGATTGAGAGAGTATTAAATTTTTTATCATAAGCTTTGTAGCACAAACTAGGCGTAG

Coding sequence (CDS)

ATGTTAAAAAACTGGTTCCGCCATGGCTACAACAAGGTGGCTAAGACGAGGTTGGCGGAGAAGGAAAAGTTTGGAGTATTACAAGCCCATCCTGCGGCTCAGAGACATGCAGAAGAAGCCATGGAAGCTCATGCTGAAAAGCAGACCAAGCTTAAATCCAATCAAAAGGAGTTCAAAATTTATAGGTGGAATCCTCAATATCCCAACCACAAGCCTTTCCTTCAATCTTTCTTTGTTGATCTCTCTAAATGTGGTCCTATGGTTTTAGATGCATTGCAGAAGATAAAAGCAGAGGAAGACTCGAGCTTGAGCTATAGAAGGTCTTGTAGGGAAGGAATATGTGGATCATGTGGCATGAACATTGATGGAGCTAACACAGTGGCCTGCCTCAAACCTATTGATGCTGACACTTCCAAACCCACCATTGTAACTCCTCTTCCCCATATGTTTGTCATCAAAGATCTTGTTGTTGATCTCACCAACTTCTACCAACAATACAAGTCGATTGAGCCATGGCTGAAGACTAGAAGATCGCCAGAGGACGGGCGAGAGTTTAGGCAATCTCAGGCAGAGAGGAAGAAGCTAGATGGGTTGTATGAGTGTATTCTTTGTGCTTGTTGCAGTGCTTCATGTCCTCCATATTGGTGGAATCCAGAAGAGTTTCTTGGTCCTGCTGCATTGCTCCATGCCTATCGATGGATCTCTGATAGTCGAGATGAGTTCGAGAAGGAACGATTGCAAGCAATAGTGGAAGACGACACAAAGCTTTATAGATGCAGAACCGTAAAGAACTGCACAGCCAACTGCCCCAAAAGCCTCGATCCTTCCTCTGCCATTCACCACATGAAGGCAATGCATTTGATCTCTAAATCCAATATTAAGCTACCCAACAATTAG

Protein sequence

MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLKSNQKEFKIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSPEDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRDEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSNIKLPNN

Homology

[Close]

BLAST of CcUC07G137280 vs. NCBI nr
Match: XP_038875058.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Benincasa hispida])

HSP 1 Score: 552.0 bits (1421), Expect = 3.2e-153
Identity = 267/297 (89.90%), Postives = 278/297 (93.60%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLKSNQKEFKI 60
           MLK+WFRHGYNKVAK RLA K KFGVL+AHP AQ+HAEEAMEAH E Q+ LK +QKEFKI
Sbjct: 1   MLKSWFRHGYNKVAK-RLAMKGKFGVLEAHPKAQQHAEEAMEAHGEIQSNLKFHQKEFKI 60

Query: 61  YRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGMN 120
           YRWNPQYPNHKPFL SFFVDLSKCGPMVLD LQKIKAE+DSSLSYRRSCREGICGSC MN
Sbjct: 61  YRWNPQYPNHKPFLHSFFVDLSKCGPMVLDGLQKIKAEQDSSLSYRRSCREGICGSCAMN 120

Query: 121 IDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSPE 180
           IDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRR  E
Sbjct: 121 IDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRPAE 180

Query: 181 DGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRDE 240
           DGREFRQS+AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALL+AYRWISDSRDE
Sbjct: 181 DGREFRQSRAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLNAYRWISDSRDE 240

Query: 241 FEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSNIKLPN 298
           FEKERLQAIVED TKLYRCRTV+NCTANCPKSLDPSSAIH MKAMHLISKSN  L N
Sbjct: 241 FEKERLQAIVEDKTKLYRCRTVQNCTANCPKSLDPSSAIHRMKAMHLISKSNKVLNN 296

[Close]

BLAST of CcUC07G137280 vs. NCBI nr
Match: XP_004146922.1 (succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucumis sativus] >KGN53225.1 hypothetical protein Csa_014570 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 2.8e-149
Identity = 261/300 (87.00%), Postives = 276/300 (92.00%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK--SNQKEF 60
           MLK WFRHGYNK        K++FGVL+A P A++HAEEAMEAH E ++ L   +N+KEF
Sbjct: 1   MLKRWFRHGYNK------EWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEF 60

Query: 61  KIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCG 120
           KIYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQKIKAE+DSSLSYRRSCREGICGSCG
Sbjct: 61  KIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCG 120

Query: 121 MNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRS 180
           MNIDGANTVACLKPIDADTSKPTI+TPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRS
Sbjct: 121 MNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRS 180

Query: 181 PEDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSR 240
            E GREFRQS AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHAYRWISDSR
Sbjct: 181 AEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSR 240

Query: 241 DEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSNIKLPNN 299
           DEF+KERLQAI EDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLIS+SN K+PNN
Sbjct: 241 DEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN-KVPNN 293

[Close]

BLAST of CcUC07G137280 vs. NCBI nr
Match: XP_008454471.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucumis melo] >TYK16738.1 succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 527.7 bits (1358), Expect = 6.4e-146
Identity = 252/293 (86.01%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK-SNQKEFK 60
           MLK WFRH YNKV+K R      FGVL+ HP A++HAEEAMEAH E ++ L+ +NQKEFK
Sbjct: 1   MLKGWFRHAYNKVSKKR------FGVLEEHPIAKQHAEEAMEAHGEIKSNLRFNNQKEFK 60

Query: 61  IYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGM 120
           IYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQ IKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSP 180
           NIDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS 
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 EDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           E GREFRQ+ AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHAYRWISDSRD
Sbjct: 181 EGGREFRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240

Query: 241 EFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 293
           EF++ERLQAI ED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 EFKEERLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of CcUC07G137280 vs. NCBI nr
Match: XP_008454472.1 (PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial-like [Cucumis melo] >KAA0044720.1 succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa] >TYK16739.1 succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 527.7 bits (1358), Expect = 6.4e-146
Identity = 253/299 (84.62%), Postives = 276/299 (92.31%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK-SNQKEFK 60
           MLK+WFRH YNKV+      K++FGVL+ HP A++HAEEAMEAH E ++ L+ +NQKEFK
Sbjct: 1   MLKSWFRHAYNKVS------KQRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFK 60

Query: 61  IYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGM 120
           IYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQ IKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSP 180
           NIDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS 
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 EDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           E GREFRQ+ AERKKLDGLYECILCACCSASCPPYWWNPEEF+GPAALLHAYRWISDSRD
Sbjct: 181 EGGREFRQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRD 240

Query: 241 EFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSNIKLPNN 299
           EF+KERLQAI ED TKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI +SN K+PN+
Sbjct: 241 EFKKERLQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSN-KVPNH 292

[Close]

BLAST of CcUC07G137280 vs. NCBI nr
Match: KAA0044721.1 (succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. makuwa])

HSP 1 Score: 527.7 bits (1358), Expect = 6.4e-146
Identity = 252/293 (86.01%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK-SNQKEFK 60
           MLK WFRH YNKV+K R      FGVL+ HP A++HAEEAMEAH E ++ L+ +NQKEFK
Sbjct: 1   MLKGWFRHAYNKVSKKR------FGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFK 60

Query: 61  IYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGM 120
           IYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQ IKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSP 180
           NIDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS 
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 EDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           E GREFRQ+ AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHAYRWISDSRD
Sbjct: 181 EGGREFRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240

Query: 241 EFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 293
           EF++ERLQAI ED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 EFKEERLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of CcUC07G137280 vs. ExPASy Swiss-Prot
Match: Q9FJP9 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-3 PE=1 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 1.1e-116
Identity = 198/269 (73.61%), Postives = 228/269 (84.76%), Query Frame = 0


Query: 24  FGVLQAHPAAQRHAEEAMEAH---AEKQTKLKSNQKEFKIYRWNPQYPNHKPFLQSFFVD 83
           F +L  H AAQ  +++ +++     EK+ + K  +KEFKIYRWNP  PN KPFLQSFFVD
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 84  LSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKP 143
           LS CGPMVLD LQKIKAE+D+SLSYRRSCREGICGSC MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 144 TIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSPEDGREFRQSQAERKKLDGLYE 203
           TI+TPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+ P+DGRE RQS  +RKKLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 204 CILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRDEFEKERLQAIVEDDTKLYRCR 263
           CILCACC+ SCP YWWNPEEF GPAALL AYRWISDSRDE+ +ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 264 TVKNCTANCPKSLDPSSAIHHMKAMHLIS 290
            +KNCTA CPK L+P+SAI  MK+ HL+S
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]

BLAST of CcUC07G137280 vs. ExPASy Swiss-Prot
Match: Q6H4G3 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-2 PE=1 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.6e-99
Identity = 174/285 (61.05%), Postives = 216/285 (75.79%), Query Frame = 0


Query: 24  FGVLQAHPAAQRHAEEAME---AHAEKQTKLK--------------SNQKEFKIYRWNPQ 83
           F  L+ HPAA+ +A +A E   A A K+ +++              S  KEF++YRW+P 
Sbjct: 26  FPSLRGHPAARANARDAAEKQAALAAKEEEIRDHRRGDAAAASPAPSTVKEFRVYRWSPD 85

Query: 84  YPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGMNIDGANT 143
            P+ +P LQS+ VDL+ CGPMVLD LQKIKAE D++L++RRSCREGICGSC M IDG NT
Sbjct: 86  APSRRPHLQSYHVDLATCGPMVLDVLQKIKAEHDATLAFRRSCREGICGSCSMCIDGVNT 145

Query: 144 VACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTR-RSPEDGREF 203
           VACL+P+D DTS  T VTPLPHM+V++DLVVDLT+FYQQYKS+EPWLK + ++  +  E 
Sbjct: 146 VACLRPVDTDTSSATTVTPLPHMYVVRDLVVDLTSFYQQYKSVEPWLKRKTKTKTETTEH 205

Query: 204 RQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRDEFEKER 263
            QS  ERK+LDGLYECILCACCSA+CP YWWN E FLGPAALLHAYRW+SDSRDE+  ER
Sbjct: 206 AQSPEERKRLDGLYECILCACCSAACPSYWWNAEAFLGPAALLHAYRWVSDSRDEYAAER 265

Query: 264 LQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISK 291
           +QA+ E   KLYRCR +K+CTA CPKSLDP++AI  MK +H + K
Sbjct: 266 VQALAEGWDKLYRCRMIKSCTATCPKSLDPAAAISAMKTLHQLGK 310

[Close]

BLAST of CcUC07G137280 vs. ExPASy Swiss-Prot
Match: Q9S827 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH2-1 PE=1 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 2.2e-88
Identity = 155/240 (64.58%), Postives = 187/240 (77.92%), Query Frame = 0


Query: 49  TKLKSNQKEFKIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRS 108
           +K  +N K F IYRW+P  P+ KP L+ + VDLS CGPMVLD L KIK E+D SL++RRS
Sbjct: 42  SKAGANTKTFSIYRWDPDSPSTKPHLKDYKVDLSDCGPMVLDVLLKIKNEQDPSLTFRRS 101

Query: 109 CREGICGSCGMNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKS 168
           CREGICGSC MNIDG N +ACL  I + +S  TI +PLPHMFVIKDLVVD+TNFY QYKS
Sbjct: 102 CREGICGSCAMNIDGDNGLACLTKISSASSASTI-SPLPHMFVIKDLVVDMTNFYNQYKS 161

Query: 169 IEPWLKTRRS-PEDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAAL 228
           +EPWLK + + P+ G+E  Q++A+R KLDG+YECILCACCS SCP YWWNPEE+LGPAAL
Sbjct: 162 VEPWLKRKDAPPQPGKEIPQTKADRAKLDGMYECILCACCSTSCPSYWWNPEEYLGPAAL 221

Query: 229 LHAYRWISDSRDEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHL 288
           LHA RWI DSRD+F KERL +I  D+ KLYRC T+KNCT  CPK L+P+  I  +K + L
Sbjct: 222 LHANRWIQDSRDQFTKERLDSI-NDEFKLYRCHTIKNCTHACPKGLNPAKHIDTIKKLQL 279

[Close]

BLAST of CcUC07G137280 vs. ExPASy Swiss-Prot
Match: Q8LB02 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-2 PE=1 SV=2)

HSP 1 Score: 322.0 bits (824), Expect = 7.0e-87
Identity = 156/232 (67.24%), Postives = 181/232 (78.02%), Query Frame = 0


Query: 56  KEFKIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICG 115
           K F+IYRWNP  P  KP LQ + +DL  CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 116 SCGMNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 175
           SC MNIDG N +ACL  I++  SK T +TPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK- 168

Query: 176 RRSPED--GREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRW 235
           R++P    G+E  QS+ +R KLDG+YECILCACCS SCP YWWNPE +LGPAALLHA RW
Sbjct: 169 RKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 228

Query: 236 ISDSRDEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 286
           ISDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 ISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]

BLAST of CcUC07G137280 vs. ExPASy Swiss-Prot
Match: Q8LBZ7 (Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH2-1 PE=1 SV=2)

HSP 1 Score: 321.2 bits (822), Expect = 1.2e-86
Identity = 161/249 (64.66%), Postives = 187/249 (75.10%), Query Frame = 0


Query: 45  AEKQTKLK------SNQKEFKIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAE 104
           AE +TK        SN K F+IYRWNP  P  KP LQ++ +DL  CGPMVLDAL KIK E
Sbjct: 33  AEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNE 92

Query: 105 EDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVD 164
            D SL++RRSCREGICGSC MNIDG N +ACL  I  + S+ TI TPLPHMFVIKDLVVD
Sbjct: 93  MDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTI-TPLPHMFVIKDLVVD 152

Query: 165 LTNFYQQYKSIEPWLKTRRSPED--GREFRQSQAERKKLDGLYECILCACCSASCPPYWW 224
           +TNFY QYKSIEPWLK R++P     +E  QS+ +R KLDG+YECILCACCS SCP YWW
Sbjct: 153 MTNFYNQYKSIEPWLK-RKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWW 212

Query: 225 NPEEFLGPAALLHAYRWISDSRDEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPS 284
           NPE +LGPAALLHA RWISDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P 
Sbjct: 213 NPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPG 272

Query: 285 SAIHHMKAM 286
             I H+K +
Sbjct: 273 KQITHIKQL 277

[Close]

BLAST of CcUC07G137280 vs. ExPASy TrEMBL
Match: A0A0A0KUA7 (Iron-sulfur subunit of complex II OS=Cucumis sativus OX=3659 GN=Csa_4G028980 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149
Identity = 261/300 (87.00%), Postives = 276/300 (92.00%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK--SNQKEF 60
           MLK WFRHGYNK        K++FGVL+A P A++HAEEAMEAH E ++ L   +N+KEF
Sbjct: 1   MLKRWFRHGYNK------EWKQRFGVLEARPMAKQHAEEAMEAHGEIKSNLDEFNNRKEF 60

Query: 61  KIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCG 120
           KIYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQKIKAE+DSSLSYRRSCREGICGSCG
Sbjct: 61  KIYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQKIKAEKDSSLSYRRSCREGICGSCG 120

Query: 121 MNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRS 180
           MNIDGANTVACLKPIDADTSKPTI+TPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRS
Sbjct: 121 MNIDGANTVACLKPIDADTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRS 180

Query: 181 PEDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSR 240
            E GREFRQS AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHAYRWISDSR
Sbjct: 181 AEGGREFRQSPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSR 240

Query: 241 DEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSNIKLPNN 299
           DEF+KERLQAI EDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLIS+SN K+PNN
Sbjct: 241 DEFKKERLQAIAEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISRSN-KVPNN 293

[Close]

BLAST of CcUC07G137280 vs. ExPASy TrEMBL
Match: A0A5A7TNF4 (Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005780 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.1e-146
Identity = 253/299 (84.62%), Postives = 276/299 (92.31%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK-SNQKEFK 60
           MLK+WFRH YNKV+      K++FGVL+ HP A++HAEEAMEAH E ++ L+ +NQKEFK
Sbjct: 1   MLKSWFRHAYNKVS------KQRFGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFK 60

Query: 61  IYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGM 120
           IYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQ IKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSP 180
           NIDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS 
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 EDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           E GREFRQ+ AERKKLDGLYECILCACCSASCPPYWWNPEEF+GPAALLHAYRWISDSRD
Sbjct: 181 EGGREFRQTPAERKKLDGLYECILCACCSASCPPYWWNPEEFIGPAALLHAYRWISDSRD 240

Query: 241 EFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSNIKLPNN 299
           EF+KERLQAI ED TKLYRCRTV+NCTANCPKSLDPSSAIH+MKAMHLI +SN K+PN+
Sbjct: 241 EFKKERLQAIAEDKTKLYRCRTVQNCTANCPKSLDPSSAIHNMKAMHLIFRSN-KVPNH 292

[Close]

BLAST of CcUC07G137280 vs. ExPASy TrEMBL
Match: A0A5A7TT90 (Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00050 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.1e-146
Identity = 252/293 (86.01%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK-SNQKEFK 60
           MLK WFRH YNKV+K R      FGVL+ HP A++HAEEAMEAH E ++ L+ +NQKEFK
Sbjct: 1   MLKGWFRHAYNKVSKKR------FGVLEEHPMAKQHAEEAMEAHGEIKSNLRFNNQKEFK 60

Query: 61  IYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGM 120
           IYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQ IKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSP 180
           NIDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS 
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 EDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           E GREFRQ+ AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHAYRWISDSRD
Sbjct: 181 EGGREFRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240

Query: 241 EFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 293
           EF++ERLQAI ED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 EFKEERLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of CcUC07G137280 vs. ExPASy TrEMBL
Match: A0A5D3CZM3 (Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005770 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.1e-146
Identity = 252/293 (86.01%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK-SNQKEFK 60
           MLK WFRH YNKV+K R      FGVL+ HP A++HAEEAMEAH E ++ L+ +NQKEFK
Sbjct: 1   MLKGWFRHAYNKVSKKR------FGVLEEHPIAKQHAEEAMEAHGEIKSNLRFNNQKEFK 60

Query: 61  IYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGM 120
           IYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQ IKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSP 180
           NIDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS 
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 EDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           E GREFRQ+ AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHAYRWISDSRD
Sbjct: 181 EGGREFRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240

Query: 241 EFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 293
           EF++ERLQAI ED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 EFKEERLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of CcUC07G137280 vs. ExPASy TrEMBL
Match: A0A1S3BZX5 (Iron-sulfur subunit of complex II OS=Cucumis melo OX=3656 GN=LOC103494867 PE=3 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 3.1e-146
Identity = 252/293 (86.01%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MLKNWFRHGYNKVAKTRLAEKEKFGVLQAHPAAQRHAEEAMEAHAEKQTKLK-SNQKEFK 60
           MLK WFRH YNKV+K R      FGVL+ HP A++HAEEAMEAH E ++ L+ +NQKEFK
Sbjct: 1   MLKGWFRHAYNKVSKKR------FGVLEEHPIAKQHAEEAMEAHGEIKSNLRFNNQKEFK 60

Query: 61  IYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGM 120
           IYRWNPQYPNHKPFL SFF+DLSKCGPMVLDALQ IKAE+DSSLSYRRSCREGICGSC M
Sbjct: 61  IYRWNPQYPNHKPFLHSFFLDLSKCGPMVLDALQMIKAEKDSSLSYRRSCREGICGSCAM 120

Query: 121 NIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSP 180
           NIDGANTVACLKPIDADTSKPTI+TPLPHM+VIKDLVVDLTNFYQQYKSIEPWLKTRRS 
Sbjct: 121 NIDGANTVACLKPIDADTSKPTIITPLPHMYVIKDLVVDLTNFYQQYKSIEPWLKTRRSA 180

Query: 181 EDGREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRD 240
           E GREFRQ+ AERKKLDGLYECILCACCS SCPPYWWNPEEFLGPAALLHAYRWISDSRD
Sbjct: 181 EGGREFRQTPAERKKLDGLYECILCACCSTSCPPYWWNPEEFLGPAALLHAYRWISDSRD 240

Query: 241 EFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAMHLISKSN 293
           EF++ERLQAI ED+TKLYRCRTVKNCTA CPKSLDPSSAIHHMKAMHLIS+SN
Sbjct: 241 EFKEERLQAIAEDETKLYRCRTVKNCTATCPKSLDPSSAIHHMKAMHLISRSN 287

[Close]

BLAST of CcUC07G137280 vs. TAIR 10
Match: AT5G65165.1 (succinate dehydrogenase 2-3 )

HSP 1 Score: 421.0 bits (1081), Expect = 7.9e-118
Identity = 198/269 (73.61%), Postives = 228/269 (84.76%), Query Frame = 0


Query: 24  FGVLQAHPAAQRHAEEAMEAH---AEKQTKLKSNQKEFKIYRWNPQYPNHKPFLQSFFVD 83
           F +L  H AAQ  +++ +++     EK+ + K  +KEFKIYRWNP  PN KPFLQSFFVD
Sbjct: 32  FPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFVD 91

Query: 84  LSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKP 143
           LS CGPMVLD LQKIKAE+D+SLSYRRSCREGICGSC MNIDG NTVACLKPI+ +TSKP
Sbjct: 92  LSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSKP 151

Query: 144 TIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTRRSPEDGREFRQSQAERKKLDGLYE 203
           TI+TPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKTR+ P+DGRE RQS  +RKKLDGLYE
Sbjct: 152 TIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLYE 211

Query: 204 CILCACCSASCPPYWWNPEEFLGPAALLHAYRWISDSRDEFEKERLQAIVEDDTKLYRCR 263
           CILCACC+ SCP YWWNPEEF GPAALL AYRWISDSRDE+ +ERLQAI E +TK+YRCR
Sbjct: 212 CILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRCR 271

Query: 264 TVKNCTANCPKSLDPSSAIHHMKAMHLIS 290
            +KNCTA CPK L+P+SAI  MK+ HL+S
Sbjct: 272 AIKNCTATCPKGLNPASAILKMKSKHLLS 300

[Close]

BLAST of CcUC07G137280 vs. TAIR 10
Match: AT5G40650.1 (succinate dehydrogenase 2-2 )

HSP 1 Score: 322.0 bits (824), Expect = 5.0e-88
Identity = 156/232 (67.24%), Postives = 181/232 (78.02%), Query Frame = 0


Query: 56  KEFKIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAEEDSSLSYRRSCREGICG 115
           K F+IYRWNP  P  KP LQ + +DL  CGPMVLDAL KIK E D SL++RRSCREGICG
Sbjct: 49  KTFQIYRWNPDNPG-KPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICG 108

Query: 116 SCGMNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 175
           SC MNIDG N +ACL  I++  SK T +TPLPHMFVIKDLVVD+TNFY QYKSIEPWLK 
Sbjct: 109 SCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK- 168

Query: 176 RRSPED--GREFRQSQAERKKLDGLYECILCACCSASCPPYWWNPEEFLGPAALLHAYRW 235
           R++P    G+E  QS+ +R KLDG+YECILCACCS SCP YWWNPE +LGPAALLHA RW
Sbjct: 169 RKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 228

Query: 236 ISDSRDEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPSSAIHHMKAM 286
           ISDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P   I H+K +
Sbjct: 229 ISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIKQL 276

[Close]

BLAST of CcUC07G137280 vs. TAIR 10
Match: AT3G27380.1 (succinate dehydrogenase 2-1 )

HSP 1 Score: 321.2 bits (822), Expect = 8.5e-88
Identity = 161/249 (64.66%), Postives = 187/249 (75.10%), Query Frame = 0


Query: 45  AEKQTKLK------SNQKEFKIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAE 104
           AE +TK        SN K F+IYRWNP  P  KP LQ++ +DL  CGPMVLDAL KIK E
Sbjct: 33  AEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNE 92

Query: 105 EDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVD 164
            D SL++RRSCREGICGSC MNIDG N +ACL  I  + S+ TI TPLPHMFVIKDLVVD
Sbjct: 93  MDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTI-TPLPHMFVIKDLVVD 152

Query: 165 LTNFYQQYKSIEPWLKTRRSPED--GREFRQSQAERKKLDGLYECILCACCSASCPPYWW 224
           +TNFY QYKSIEPWLK R++P     +E  QS+ +R KLDG+YECILCACCS SCP YWW
Sbjct: 153 MTNFYNQYKSIEPWLK-RKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWW 212

Query: 225 NPEEFLGPAALLHAYRWISDSRDEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPS 284
           NPE +LGPAALLHA RWISDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P 
Sbjct: 213 NPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPG 272

Query: 285 SAIHHMKAM 286
             I H+K +
Sbjct: 273 KQITHIKQL 277

[Close]

BLAST of CcUC07G137280 vs. TAIR 10
Match: AT3G27380.2 (succinate dehydrogenase 2-1 )

HSP 1 Score: 321.2 bits (822), Expect = 8.5e-88
Identity = 161/249 (64.66%), Postives = 187/249 (75.10%), Query Frame = 0


Query: 45  AEKQTKLK------SNQKEFKIYRWNPQYPNHKPFLQSFFVDLSKCGPMVLDALQKIKAE 104
           AE +TK        SN K F+IYRWNP  P  KP LQ++ +DL  CGPMVLDAL KIK E
Sbjct: 33  AEAETKASSGGGRGSNLKTFQIYRWNPDNPG-KPELQNYQIDLKDCGPMVLDALIKIKNE 92

Query: 105 EDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADTSKPTIVTPLPHMFVIKDLVVD 164
            D SL++RRSCREGICGSC MNIDG N +ACL  I  + S+ TI TPLPHMFVIKDLVVD
Sbjct: 93  MDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIQDEASETTI-TPLPHMFVIKDLVVD 152

Query: 165 LTNFYQQYKSIEPWLKTRRSPED--GREFRQSQAERKKLDGLYECILCACCSASCPPYWW 224
           +TNFY QYKSIEPWLK R++P     +E  QS+ +R KLDG+YECILCACCS SCP YWW
Sbjct: 153 MTNFYNQYKSIEPWLK-RKTPASVPAKEILQSKKDRAKLDGMYECILCACCSTSCPSYWW 212

Query: 225 NPEEFLGPAALLHAYRWISDSRDEFEKERLQAIVEDDTKLYRCRTVKNCTANCPKSLDPS 284
           NPE +LGPAALLHA RWISDSRDE+ KERL+AI +D+ KLYRC T+ NC   CPK L+P 
Sbjct: 213 NPESYLGPAALLHANRWISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPG 272

Query: 285 SAIHHMKAM 286
             I H+K +
Sbjct: 273 KQITHIKQL 277

The following BLAST results are available for this feature:

BLAST of CcUC07G137280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875058.1	3.2e-153	89.90	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Benin...	[more]
XP_004146922.1	2.8e-149	87.00	succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial [Cucum...	[more]
XP_008454471.1	6.4e-146	86.01	PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochond...	[more]
XP_008454472.1	6.4e-146	84.62	PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochond...	[more]
KAA0044721.1	6.4e-146	86.01	succinate dehydrogenase (ubiquinone) iron-sulfur subunit 3 [Cucumis melo var. ma...	[more]

BLAST of CcUC07G137280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJP9	1.1e-116	73.61	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3, mitochondrial OS=Ara...	[more]
Q6H4G3	3.6e-99	61.05	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ory...	[more]
Q9S827	2.2e-88	64.58	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ory...	[more]
Q8LB02	7.0e-87	67.24	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial OS=Ara...	[more]
Q8LBZ7	1.2e-86	64.66	Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1, mitochondrial OS=Ara...	[more]

BLAST of CcUC07G137280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUA7	1.4e-149	87.00	Iron-sulfur subunit of complex II OS=Cucumis sativus OX=3659 GN=Csa_4G028980 PE=...	[more]
A0A5A7TNF4	3.1e-146	84.62	Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7TT90	3.1e-146	86.01	Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3CZM3	3.1e-146	86.01	Iron-sulfur subunit of complex II OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BZX5	3.1e-146	86.01	Iron-sulfur subunit of complex II OS=Cucumis melo OX=3656 GN=LOC103494867 PE=3 S...	[more]

BLAST of CcUC07G137280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65165.1	7.9e-118	73.61	succinate dehydrogenase 2-3	[more]
AT5G40650.1	5.0e-88	67.24	succinate dehydrogenase 2-2	[more]
AT3G27380.1	8.5e-88	64.66	succinate dehydrogenase 2-1	[more]
AT3G27380.2	8.5e-88	64.66	succinate dehydrogenase 2-1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 37..57
None	No IPR available	PFAM	PF13534	Fer4_17	coord: 200..274 e-value: 2.0E-8 score: 34.7
None	No IPR available	PANTHER	PTHR11921:SF40	SUCCINATE DEHYDROGENASE [UBIQUINONE] IRON-SULFUR SUBUNIT 3, MITOCHONDRIAL	coord: 1..291
None	No IPR available	PANTHER	PTHR11921	SUCCINATE DEHYDROGENASE IRON-SULFUR PROTEIN	coord: 1..291
None	No IPR available	SUPERFAMILY	46548	alpha-helical ferredoxin	coord: 160..286
IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	PFAM	PF13085	Fer2_3	coord: 58..163 e-value: 9.2E-31 score: 106.1
IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	TIGRFAM	TIGR00384	TIGR00384	coord: 60..283 e-value: 1.7E-79 score: 264.4
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 45..158 e-value: 3.5E-40 score: 138.3
IPR009051	Alpha-helical ferredoxin	GENE3D	1.10.1060.10		coord: 159..295 e-value: 9.9E-46 score: 156.7
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 201..212
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 109..117
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 191..221 score: 7.499944
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 56..149 score: 8.519638
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 54..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G137280.1	CcUC07G137280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022904	respiratory electron transport chain
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045273	respiratory chain complex II
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0051538	3 iron, 4 sulfur cluster binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0051536	iron-sulfur cluster binding
molecular_function	GO:0016491	oxidoreductase activity