CcUC07G137120 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G137120
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Transcription termination factor MTERF5
Location	CicolChr07: 22123695 .. 22125923 (-)
RNA-Seq Expression	CcUC07G137120
Synteny	CcUC07G137120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTAAGGCAATTTACATAGAAGTCCCTTGATTAATTCGGCAAGTGGCCCAAATCACGATTATCCCTATTTTCCTAATTTTTATAAAAAACAACCCTTTTACCCTAATTAGTTTTCAAAAATACCTTCTTTATCCAAATCCCCTTCTTTCCCTCAAAATATATGATATATGAAACTATATTAAAATAAAATAAAATAAAATAAACCCTAAATCAGAGTTACTCATTTGTGACTCGCAGCCGCACATCACGACCCGCCCACAACCTAAGGTTTTCAATCTTCTCTCACGCCGGCAGCCAATCTCACGGTCTTTGATCTCTTTCTTCTCTCTTCATCTTCACCGTCGTCACTATTATGCTCCAATCTTCCATTCTCAAGGCAATTTCAGTTCAAAATCTTGTCAAGTCCAGTGGTTTCAAACAGGGGGTTAATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTTAATCCTCCTTCCTTCCTCCGAATTGATCCATTTTTGTATTATTTCTTCTCTTCTTCTTCCCAAACCCAAGCCTCTGCTTCAAATGGAGTCGTCATCCAATACCTCATCGATACCTTCCAACTGTCCCCCGCCAGAGCGGTGTCGATTATGAGCACCCGTAGAGGCCTTCAATCAACTGAAAAGCCTCAATCTGTGTACAGATATCTTTCAGAGCTTGGATTCTCCGACGCCCACATTAAATCGGCGATTCGGATCACGCCGCAGATCGCGTTTTCCAGCATTGAGAAAACTCTGAAGCCAAAGATAGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTGGGCTTTTAACTGTTAGTTTGGAGAAGAAATTGGTGCCCAGTGTTGAGATTCTTAAGAATGTTTTCCACAAGGATATTTGTAATAACGATATCTTGCTAGTTATGCAGCGATGTTCTTATGCTATTATGAGATCCCCATGTAAAAGGTTGTCTGTAAATATTAACTACTTACAAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGAGACAACCTGGACTTTTTTGTAATCGTGAATCTCGAGTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCAATACGAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCTACCTTTAACAAGAAAGTGGAGCTGATTTGTAGCTTTGGAATAACCGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGGTAAGGACCTCCATTGGTAAACTTAAGCTTGGTTTAGAATTTTTCATGAACGAGGCAAAAGTTGGCAAATCAGATATTGTTCGTAATCCTGCTTGTTTGATGCACGCAATGCAGGGGAGAGTGCTCCCTCGTTATAGAGTTCTACAGATTGTGAAGTTGAAGAGGCTAAAGAAGAAGCACCCAAAATTAATCGCTACATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTTGTGTGTAAATTTCCTGATAATATGAAAGAATTGTTGGTGGCCTTTAGAGGTGATTCTGTGGGTGCATTGCAGCCTAAGGAGTTAGCAACATGAGGATGGGGCCAGAAGTAGAGCTAATATTTGATCTACCAACCAGTTGCCGAGTTGCCCGGTTTGTCGATCTCATGTGCTTTGTTCAAGCTTTGTGCACCAGATTTGGACTAATTCATGTGGTTGTTTGCCGATATGAACTTAGGTTTCTTGCAAAAGCTGTGCACTATATTCCAGAGATATTCTTGAAAGTTTGGCAAGTGTATCTGAGAATAGAAAAATCAAATGCTTTCCAAGATATATAGAGTAATAAGTATGAAGAACGAACGCTTTAGCCTGGGTAATGTGTCTGTATTTGACAAGTGTCGAACTCTTTGATACTTATTCGAACACATAAAAGACATTTGAAGGGCGTGTTTTAGGGATTCTCTATCTGTAGTAGAGTAGTATTCGTTTTTGTATGGAATGGTTTTGTGTTCATGTCTTATTCTTGTCTAATGCAGGATAGCCGTAATTACATTTTTGAACTGTCGGGCTATTATTATTATTATTATTTTTATTTTCGGAGAATTCTACATTTGGTTTGAGTTTTAGGTGGTGATTCTTGGTGCTCTGTTGCAACCAAAGTTTTTGTCAAGAATATTAAGCTTGAGAAGAGTGCAACAAAAAAACACTCATGTACCAACC

mRNA sequence

TATTAAGGCAATTTACATAGAAGTCCCTTGATTAATTCGGCAAGTGGCCCAAATCACGATTATCCCTATTTTCCTAATTTTTATAAAAAACAACCCTTTTACCCTAATTAGTTTTCAAAAATACCTTCTTTATCCAAATCCCCTTCTTTCCCTCAAAATATATGATATATGAAACTATATTAAAATAAAATAAAATAAAATAAACCCTAAATCAGAGTTACTCATTTGTGACTCGCAGCCGCACATCACGACCCGCCCACAACCTAAGGTTTTCAATCTTCTCTCACGCCGGCAGCCAATCTCACGGTCTTTGATCTCTTTCTTCTCTCTTCATCTTCACCGTCGTCACTATTATGCTCCAATCTTCCATTCTCAAGGCAATTTCAGTTCAAAATCTTGTCAAGTCCAGTGGTTTCAAACAGGGGGTTAATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTTAATCCTCCTTCCTTCCTCCGAATTGATCCATTTTTGTATTATTTCTTCTCTTCTTCTTCCCAAACCCAAGCCTCTGCTTCAAATGGAGTCGTCATCCAATACCTCATCGATACCTTCCAACTGTCCCCCGCCAGAGCGGTGTCGATTATGAGCACCCGTAGAGGCCTTCAATCAACTGAAAAGCCTCAATCTGTGTACAGATATCTTTCAGAGCTTGGATTCTCCGACGCCCACATTAAATCGGCGATTCGGATCACGCCGCAGATCGCGTTTTCCAGCATTGAGAAAACTCTGAAGCCAAAGATAGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTGGGCTTTTAACTGTTAGTTTGGAGAAGAAATTGGTGCCCAGTGTTGAGATTCTTAAGAATGTTTTCCACAAGGATATTTGTAATAACGATATCTTGCTAGTTATGCAGCGATGTTCTTATGCTATTATGAGATCCCCATGTAAAAGGTTGTCTGTAAATATTAACTACTTACAAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGAGACAACCTGGACTTTTTTGTAATCGTGAATCTCGAGTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCAATACGAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCTACCTTTAACAAGAAAGTGGAGCTGATTTGTAGCTTTGGAATAACCGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGGTAAGGACCTCCATTGGTAAACTTAAGCTTGGTTTAGAATTTTTCATGAACGAGGCAAAAGTTGGCAAATCAGATATTGTTCGTAATCCTGCTTGTTTGATGCACGCAATGCAGGGGAGAGTGCTCCCTCGTTATAGAGTTCTACAGATTGTGAAGTTGAAGAGGCTAAAGAAGAAGCACCCAAAATTAATCGCTACATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTTGTGTGTAAATTTCCTGATAATATGAAAGAATTGTTGGTGGCCTTTAGAGGTGATTCTGTGGGTGCATTGCAGCCTAAGGAGTTAGCAACATGAGGATGGGGCCAGAAGTAGAGCTAATATTTGATCTACCAACCAGTTGCCGAGTTGCCCGGTTTGTCGATCTCATGTGCTTTGTTCAAGCTTTGTGCACCAGATTTGGACTAATTCATGTGGTTGTTTGCCGATATGAACTTAGGTTTCTTGCAAAAGCTGTGCACTATATTCCAGAGATATTCTTGAAAGTTTGGCAAGTGTATCTGAGAATAGAAAAATCAAATGCTTTCCAAGATATATAGAGTAATAAGTATGAAGAACGAACGCTTTAGCCTGGGTAATGTGTCTGTATTTGACAAGTGTCGAACTCTTTGATACTTATTCGAACACATAAAAGACATTTGAAGGGCGTGTTTTAGGGATTCTCTATCTGTAGTAGAGTAGTATTCGTTTTTGTATGGAATGGTTTTGTGTTCATGTCTTATTCTTGTCTAATGCAGGATAGCCGTAATTACATTTTTGAACTGTCGGGCTATTATTATTATTATTATTTTTATTTTCGGAGAATTCTACATTTGGTTTGAGTTTTAGGTGGTGATTCTTGGTGCTCTGTTGCAACCAAAGTTTTTGTCAAGAATATTAAGCTTGAGAAGAGTGCAACAAAAAAACACTCATGTACCAACC

Coding sequence (CDS)

ATGTACGCTCTGAGACCATCATTCTCTGTTTCCTCTCGCCTTAATCCTCCTTCCTTCCTCCGAATTGATCCATTTTTGTATTATTTCTTCTCTTCTTCTTCCCAAACCCAAGCCTCTGCTTCAAATGGAGTCGTCATCCAATACCTCATCGATACCTTCCAACTGTCCCCCGCCAGAGCGGTGTCGATTATGAGCACCCGTAGAGGCCTTCAATCAACTGAAAAGCCTCAATCTGTGTACAGATATCTTTCAGAGCTTGGATTCTCCGACGCCCACATTAAATCGGCGATTCGGATCACGCCGCAGATCGCGTTTTCCAGCATTGAGAAAACTCTGAAGCCAAAGATAGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCCGATTTGGGTAAGTTCATTTCCAGGCATTCTGGGCTTTTAACTGTTAGTTTGGAGAAGAAATTGGTGCCCAGTGTTGAGATTCTTAAGAATGTTTTCCACAAGGATATTTGTAATAACGATATCTTGCTAGTTATGCAGCGATGTTCTTATGCTATTATGAGATCCCCATGTAAAAGGTTGTCTGTAAATATTAACTACTTACAAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGAGACAACCTGGACTTTTTTGTAATCGTGAATCTCGAGTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCAATACGAAAATGTTTGTTCATGGACTTCATGCTATCAGTAGTGTAAGTAATGCTACCTTTAACAAGAAAGTGGAGCTGATTTGTAGCTTTGGAATAACCGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTGTTTTGGTAAGGACCTCCATTGGTAAACTTAAGCTTGGTTTAGAATTTTTCATGAACGAGGCAAAAGTTGGCAAATCAGATATTGTTCGTAATCCTGCTTGTTTGATGCACGCAATGCAGGGGAGAGTGCTCCCTCGTTATAGAGTTCTACAGATTGTGAAGTTGAAGAGGCTAAAGAAGAAGCACCCAAAATTAATCGCTACATTGGGGATGTCTGATGAGGATTTCTTGGATAAATTTGTGTGTAAATTTCCTGATAATATGAAAGAATTGTTGGTGGCCTTTAGAGGTGATTCTGTGGGTGCATTGCAGCCTAAGGAGTTAGCAACATGA

Protein sequence

MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARAVSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMNEAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDKFVCKFPDNMKELLVAFRGDSVGALQPKELAT

Homology

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BLAST of CcUC07G137120 vs. NCBI nr
Match: XP_038888519.1 (transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 634.0 bits (1634), Expect = 8.4e-178
Identity = 324/386 (83.94%), Postives = 351/386 (90.93%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFF---SSSSQTQASASNGVVIQYLIDTFQLSP 60
           MYALRPSFSVSSRLNPPSFLRI PFLYYFF   SSSS TQ+SASN +V+QYLIDTFQLSP
Sbjct: 1   MYALRPSFSVSSRLNPPSFLRIHPFLYYFFSSSSSSSHTQSSASNAIVVQYLIDTFQLSP 60

Query: 61  ARAVSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIE 120
           ARA SIMS RRGLQSTEKPQSVY+YLS+LGFSDAHI+SAIR+ PQIAFS+IEKTLKPKIE
Sbjct: 61  ARAASIMSCRRGLQSTEKPQSVYKYLSDLGFSDAHIRSAIRLAPQIAFSNIEKTLKPKIE 120

Query: 121 FFQNLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSY 180
           FFQNLGLVGSDL KFISRHS LLTVSLEKKL+PSVEILKN+  KD CN+D+LLV++R S 
Sbjct: 121 FFQNLGLVGSDLSKFISRHSTLLTVSLEKKLMPSVEILKNILPKDNCNDDLLLVIRRWSD 180

Query: 181 AIMRSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTN 240
            +MR+PCKRLS+NINYLQSCGIVDSQL MLLKRQ  LF   ESR+KDIVS+VVE GFSTN
Sbjct: 181 RLMRTPCKRLSININYLQSCGIVDSQLLMLLKRQSSLFGRSESRLKDIVSVVVEIGFSTN 240

Query: 241 TKMFVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEF 300
           T+MFVHGLHAISSVS  T  KKVELICSFGITEKECMRMFTSAPVL+RTSIGKLKLGLEF
Sbjct: 241 TRMFVHGLHAISSVSKVTLKKKVELICSFGITEKECMRMFTSAPVLIRTSIGKLKLGLEF 300

Query: 301 FMNEAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDF 360
           FMNEAKV KSDIV +PACLMHAMQGRVLPRYRVLQIVK KRL KKHPK I TLGMSDEDF
Sbjct: 301 FMNEAKVSKSDIVGSPACLMHAMQGRVLPRYRVLQIVKSKRLMKKHPKFILTLGMSDEDF 360

Query: 361 LDKFVCKFPDNMKELLVAFRGDSVGA 384
           LD+FVC+FPDNMK+LLVA+RG+SV A
Sbjct: 361 LDRFVCRFPDNMKDLLVAYRGNSVSA 386

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BLAST of CcUC07G137120 vs. NCBI nr
Match: KAG7015351.1 (Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 615.5 bits (1586), Expect = 3.1e-172
Identity = 314/391 (80.31%), Postives = 348/391 (89.00%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QASAS G+V+QYLIDTF+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
           VSIM +RRG++STEKPQSVY+YLSELGFS AHI+S IR+ PQIAFS+IE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIKSTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM 180
           NLGLVGSDLG+FIS+HS LLTVSLEKKL+PSVEILK+VF KD CN+D+L VMQRCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQVMQRCSDKLM 180

Query: 181 RSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKM 240
           RSP  RL VNINYLQSCGIV SQLSMLLKRQP LF  RES+V+DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMN 300
           FVHGLHAISSV+NATF KKVELICSFGITEKECMRMFTSAPVL+RTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFQKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDK 360
           EA+V +SDIVR P CLMHAMQGRVLPRYRVLQ+VK K L KKHP+L+  LGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCKFPDNMKELLVAFRGDSVGALQPKELAT 392
           FV +FPD++ ELL AFRG  +  LQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CcUC07G137120 vs. NCBI nr
Match: XP_038877857.1 (transcription termination factor MTERF2, chloroplastic-like isoform X1 [Benincasa hispida] >XP_038877865.1 transcription termination factor MTERF2, chloroplastic-like isoform X1 [Benincasa hispida])

HSP 1 Score: 613.2 bits (1580), Expect = 1.5e-171
Identity = 321/402 (79.85%), Postives = 344/402 (85.57%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFF-----------SSSSQTQASASNGVVIQYL 60
           MYALRPSFSVSSRLNPPSFLRI P LYYFF           SSSS TQ+SASN +V+QYL
Sbjct: 1   MYALRPSFSVSSRLNPPSFLRIHPILYYFFSSSSSYSSSSSSSSSHTQSSASNAIVVQYL 60

Query: 61  IDTFQLSPARAVSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIE 120
           IDTFQLSPARA SIM +RRGLQSTEKPQSVY+YLS+LGFSDAHI+SAIR+ PQIAFSSIE
Sbjct: 61  IDTFQLSPARAASIMRSRRGLQSTEKPQSVYKYLSDLGFSDAHIRSAIRLAPQIAFSSIE 120

Query: 121 KTLKPKIEFFQNLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDIL 180
           KTLKPKIEFFQNLGLVGSDLGK +SRHS LLTVSLEKKL+PSVEILKN+  KD CN+D+L
Sbjct: 121 KTLKPKIEFFQNLGLVGSDLGKLMSRHSPLLTVSLEKKLMPSVEILKNILSKDKCNDDLL 180

Query: 181 LVMQRCSYAIMRSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMV 240
           L M+R S  ++RS  K LS NINYLQSCGIVDSQ  MLLKRQ   F   ES VKDIVSMV
Sbjct: 181 LFMRRYSNLLIRSTYKMLSTNINYLQSCGIVDSQFFMLLKRQSSRFGRSESGVKDIVSMV 240

Query: 241 VETGFSTNTKMFVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIG 300
           VETG STNTKMF+HGLH ISSVSNAT  KKVELICSFGITEKECMRMFTS P L+RTSIG
Sbjct: 241 VETGLSTNTKMFIHGLHVISSVSNATLKKKVELICSFGITEKECMRMFTSTPFLLRTSIG 300

Query: 301 KLKLGLEFFMNEAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIAT 360
           KLK GLEFFMNEAKV KSDIVR P CLMHAMQ RVLPR+RVLQIVK KRL   HPKLI T
Sbjct: 301 KLKHGLEFFMNEAKVSKSDIVRKPTCLMHAMQRRVLPRHRVLQIVKSKRLTMDHPKLIPT 360

Query: 361 LGMSDEDFLDKFVCKFPDNMKELLVAFRGDSVGALQPKELAT 392
           LGMSD DFLD+FV +FPDNMK+LLVAFRG+SVGALQPKELAT
Sbjct: 361 LGMSDGDFLDRFVYRFPDNMKDLLVAFRGNSVGALQPKELAT 402

[Close]

BLAST of CcUC07G137120 vs. NCBI nr
Match: XP_022984673.1 (uncharacterized protein LOC111482884 isoform X1 [Cucurbita maxima] >XP_022984674.1 uncharacterized protein LOC111482884 isoform X2 [Cucurbita maxima] >XP_022984675.1 uncharacterized protein LOC111482884 isoform X3 [Cucurbita maxima])

HSP 1 Score: 612.8 bits (1579), Expect = 2.0e-171
Identity = 311/391 (79.54%), Postives = 349/391 (89.26%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARA 60
           MYALR SFS+SSR NPPS LRIDP LY FFSSSS +QASAS G+V+QYLIDTF+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
           VSIMS+RRG+ STEKPQSVY+YLSELGFS+AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM 180
           NLGLVGSDLG+FIS+HS LLT+SLEK+L+PSVEILK+VF KD CN+D+L V++RCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 RSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKM 240
           RSP  RL VNINYLQSCGIV SQLSMLLKRQP LF  RES+V+D+VSMVVETGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMN 300
           FVHGLHAISSVSNATF KKVELICSFGITEKECMRMFTSAPVL+RTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDK 360
           EA+V +SDIVR P CLMHAMQGRVLPRYRVLQ+V  KRL KKH +LI  LGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVCKFPDNMKELLVAFRGDSVGALQPKELAT 392
           FV +FPD++ ELL AFRG  +  LQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CcUC07G137120 vs. NCBI nr
Match: XP_023552363.1 (transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609.0 bits (1569), Expect = 2.9e-170
Identity = 310/391 (79.28%), Postives = 346/391 (88.49%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QASAS G+V+QYLIDTF+LSPARA
Sbjct: 1   MYALRSSFSISSRYNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
           VSIMS+RRGL+STEKPQSVY+YLSELGFS AHI+S IR+ PQIAFS+IE+TLKPKIEFFQ
Sbjct: 61  VSIMSSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM 180
           NLGLVGSDLG+F+S+HS LLT+SLEK+L+PSVEILK+VF KD CN+D+L VMQRCS  +M
Sbjct: 121 NLGLVGSDLGRFVSKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKM 240
           RSP  RL VNINYLQSCGIV SQLSMLLKRQP LF  RES+V+DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMN 300
           FVHGLH+ISSVSNATF KKV LICSFGITEKECMRMFTSAP L+RTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVGLICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDK 360
           EA+V +SDIVR P CLMHAMQGRVLPRYRVLQ+VK  RL KKHP+L+  LGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSTRLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCKFPDNMKELLVAFRGDSVGALQPKELAT 392
           FV +FPD++ ELL AFRG  +  LQP EL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPMELET 391

[Close]

BLAST of CcUC07G137120 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.0e-10
Identity = 72/322 (22.36%), Postives = 140/322 (43.48%), Query Frame = 0


Query: 51  DTFQLSPARAVSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEK 110
           DT +L     VS + T   L    +PQ++  YL +LG +   IK+  R      + S++ 
Sbjct: 177 DTRKLRAVSRVSELDTEGAL----RPQTL--YLLDLGLNLEQIKTITRKFAAFPYYSLDG 236

Query: 111 TLKPKIEFFQNLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILL 170
            +KP +EF  +LG+  SD+   + +   +  +SL   L P++  L+ +    I  N    
Sbjct: 237 KIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETL---GIDKNQWAK 296

Query: 171 VMQRCSYAIMRSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVV 230
           ++ R   AI+    ++L+  + +L   G+ + Q+  +L R P +       V+D +   +
Sbjct: 297 IISRFP-AILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIM---SYSVEDKLRPTM 356

Query: 231 ETGFSTNTKMFVHGLHAISSVSNATFNKKVELICSF----GITEKECMRMFTSAPVLVRT 290
           E   S N  + V  LH        +    ++ +  F    G    E   M +    L   
Sbjct: 357 EYFRSLNVDVAVL-LHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTF 416

Query: 291 SIGKLKLGLEFFMNEAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKL 350
           S+ +  +    +       KS++V+ P    +++Q R+ PRY ++Q   ++ L     ++
Sbjct: 417 SLKENVMPKWDYFQTMDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLN---QV 476

Query: 351 IATLGMSDEDFLDKFVCKFPDN 369
           ++  G+  E  + K + K   N
Sbjct: 477 LSLSGIEFEKVVKKKMMKLVSN 481

[Close]

BLAST of CcUC07G137120 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 6.1e-06
Identity = 44/148 (29.73%), Postives = 74/148 (50.00%), Query Frame = 0


Query: 14  LNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARAVSIMSTRRGLQST 73
           ++P   LR++P         S   A  S+ V ++ L+ +  LS      I+     L  T
Sbjct: 45  VDPHKALRVNP---------SLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDL-LT 104

Query: 74  EKPQS----VYRYLS-ELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSD 133
             P+S    V R+LS E+  S+  I  +I   P++  SS++  L+P + F + LG VG D
Sbjct: 105 SDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRD 164

Query: 134 LGKFISRHSGLLTVSLEKKLVPSVEILK 157
                SR++ LL  ++E+ L+P +E L+
Sbjct: 165 --TITSRNTVLLVSNVERTLIPKIEYLE 180

[Close]

BLAST of CcUC07G137120 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 8.0e-06
Identity = 37/140 (26.43%), Postives = 66/140 (47.14%), Query Frame = 0


Query: 74  EKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGL-VGSDLGKF 133
           EK   +  +   LG  +  +   I   P++   SI+  L   + F  +LGL     +GK 
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 134 ISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLSVNIN 193
           + ++  L+  S++K+L P+ E LK+     +  + I  V+      + R   K L  N +
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKS--SVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYD 231

Query: 194 YLQSCGIVDSQLSMLLKRQP 213
           YL+ CG  DSQ++ ++   P
Sbjct: 232 YLKECGFGDSQIATMVTGYP 249

[Close]

BLAST of CcUC07G137120 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.0e-05
Identity = 40/146 (27.40%), Postives = 65/146 (44.52%), Query Frame = 0


Query: 69  GLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSD 128
           G    E+ + + +Y   LG     +K  + + P +    +EKT+ PK+ F Q +G+    
Sbjct: 381 GCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEA 440

Query: 129 LGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLS 188
           +G  + +   LLT SL KK+ P V  L  +    +   DI  V+      +  S   +L 
Sbjct: 441 IGNMLVKFPSLLTNSLYKKIRPVVIFL--LTRAGVTQKDIGKVIAMDPALLGCSIGTKLE 500

Query: 189 VNINYLQSCGIVDSQLSMLLKRQPGL 215
            N+ Y  S GI   QL  ++   P L
Sbjct: 501 PNMRYYISLGIRFYQLGEMIADFPML 524

[Close]

BLAST of CcUC07G137120 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 7.5e-04
Identity = 35/153 (22.88%), Postives = 72/153 (47.06%), Query Frame = 0


Query: 81  RYL-SELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFF-QNLGLVGSDLGKFISRHSG 140
           RYL  E+G  +  +   ++++PQI    ++ T   +  F  + LG     + K + +H  
Sbjct: 296 RYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQ 355

Query: 141 LLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLSVNINYLQSCG 200
           LL  S++   +P +  L+++    +CN+DIL V+   +  +  S    L     YL    
Sbjct: 356 LLHYSIDDGFLPRINFLRSI---GMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYL--VN 415

Query: 201 IVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVE 232
            +++++ +L K    L  + + R++     +VE
Sbjct: 416 ELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVE 443

[Close]

BLAST of CcUC07G137120 vs. ExPASy TrEMBL
Match: A0A6J1JB80 (uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 612.8 bits (1579), Expect = 9.7e-172
Identity = 311/391 (79.54%), Postives = 349/391 (89.26%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARA 60
           MYALR SFS+SSR NPPS LRIDP LY FFSSSS +QASAS G+V+QYLIDTF+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
           VSIMS+RRG+ STEKPQSVY+YLSELGFS+AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM 180
           NLGLVGSDLG+FIS+HS LLT+SLEK+L+PSVEILK+VF KD CN+D+L V++RCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDLLQVLRRCSDMLM 180

Query: 181 RSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKM 240
           RSP  RL VNINYLQSCGIV SQLSMLLKRQP LF  RES+V+D+VSMVVETGFSTNT+M
Sbjct: 181 RSPYTRLPVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDLVSMVVETGFSTNTRM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMN 300
           FVHGLHAISSVSNATF KKVELICSFGITEKECMRMFTSAPVL+RTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDK 360
           EA+V +SDIVR P CLMHAMQGRVLPRYRVLQ+V  KRL KKH +LI  LGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVCKFPDNMKELLVAFRGDSVGALQPKELAT 392
           FV +FPD++ ELL AFRG  +  LQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CcUC07G137120 vs. ExPASy TrEMBL
Match: A0A6J1EN21 (uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC111435860 PE=4 SV=1)

HSP 1 Score: 607.8 bits (1566), Expect = 3.1e-170
Identity = 311/391 (79.54%), Postives = 347/391 (88.75%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QASAS G+V+QYLIDTF+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
           VSIM +RRGL+STEKPQSVY+YLSELGFS AHI+S IR+ PQIAFS+IE+TLKPKIEFFQ
Sbjct: 61  VSIMRSRRGLESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIERTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM 180
           NLGLVGSDLG+FIS+HS LLTVSLEK+L+PSVEILK+VF KD CN+D+L VMQRCS  +M
Sbjct: 121 NLGLVGSDLGRFISKHSTLLTVSLEKRLMPSVEILKSVFPKDECNSDLLQVMQRCSDMLM 180

Query: 181 RSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKM 240
           RSP  RL VNI+YLQSCGIV SQLSMLLKRQP LF  RES+V+DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNISYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMN 300
           FVHGLH+ISSVSNATF KKVELICSFGITEKECMRMFTSAP L+RTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHSISSVSNATFKKKVELICSFGITEKECMRMFTSAPGLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDK 360
           EA+V +SDIV  P CLMHAMQGRVLPRYRVLQ+VK KRL +KHP+L+  LGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVCKPTCLMHAMQGRVLPRYRVLQVVKSKRLLEKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCKFPDNMKELLVAFRGDSVGALQPKELAT 392
           FV +FPD++ ELL AFRG  +  LQPKEL T
Sbjct: 361 FVHRFPDHVTELLAAFRGQCMDELQPKELET 391

[Close]

BLAST of CcUC07G137120 vs. ExPASy TrEMBL
Match: A0A6J1END2 (uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC111436067 PE=3 SV=1)

HSP 1 Score: 607.4 bits (1565), Expect = 4.1e-170
Identity = 310/391 (79.28%), Postives = 345/391 (88.24%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARA 60
           MYALR SFS+SSR NP S LRIDP LY FFSSSS +QASAS G+V+QYLIDTF+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPSSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
           VSIM +RRG++STEKPQSVY+YLSELGFS AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMRSRRGIESTEKPQSVYKYLSELGFSKAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM 180
           N GLVGSDLG+FIS+HS LLTVSLEKKL+PSVEILK+VF KD CN+D+L  MQRC   +M
Sbjct: 121 NFGLVGSDLGRFISKHSTLLTVSLEKKLMPSVEILKSVFPKDECNSDLLQGMQRCCDKLM 180

Query: 181 RSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKM 240
           RSP  RL VNINYLQSCGIV SQLSMLLKRQP LF  RES+V++IVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGKRESQVREIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMN 300
           FVHGLHAISSV+NATF KKVELICSFGITEKECMRMFTSAPVL+RTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVTNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDK 360
           EA+V +SDIVR P CLMHAMQGRVLPRYRVLQ+VK K L KKHP+L+  LGMSDEDFLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVKSKSLLKKHPQLLDILGMSDEDFLDK 360

Query: 361 FVCKFPDNMKELLVAFRGDSVGALQPKELAT 392
           FV +FPD++ ELL AFRG  +  LQPK+L T
Sbjct: 361 FVHRFPDHVIELLAAFRGQCMDELQPKQLET 391

[Close]

BLAST of CcUC07G137120 vs. ExPASy TrEMBL
Match: A0A6J1J5Y4 (uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111482884 PE=3 SV=1)

HSP 1 Score: 605.1 bits (1559), Expect = 2.0e-169
Identity = 310/387 (80.10%), Postives = 342/387 (88.37%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARA 60
           MYALR SFS+SSR NPPS LRIDP LY FFSSSS +QASAS G+V+QYLIDTF+LSPARA
Sbjct: 1   MYALRSSFSISSRHNPPSLLRIDPLLYCFFSSSSHSQASASYGIVVQYLIDTFELSPARA 60

Query: 61  VSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQ 120
           VSIMS+RRG+ STEKPQSVY+YLSELGFS+AHI+S IR+ PQIAFS+IEKTLKPKIEFFQ
Sbjct: 61  VSIMSSRRGIASTEKPQSVYKYLSELGFSEAHIQSTIRLAPQIAFSNIEKTLKPKIEFFQ 120

Query: 121 NLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM 180
           NLGLVGSDLG FIS+HS LLT+SLEK+L+PSVEILK+VF KD CN+D L VM+RCS  + 
Sbjct: 121 NLGLVGSDLGWFISKHSTLLTISLEKRLMPSVEILKSVFPKDECNSDFLQVMRRCSDMLK 180

Query: 181 RSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKM 240
           RSP  RL VNINYLQSCGIV SQLSMLLKRQP LF  RES+V+DIVSMVVETGFSTNTKM
Sbjct: 181 RSPYTRLLVNINYLQSCGIVGSQLSMLLKRQPALFGMRESQVRDIVSMVVETGFSTNTKM 240

Query: 241 FVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMN 300
           FVHGLHAISSVSNATF KKVELICSFGITEKECMRMFTSAPVL+RTS+GKLK GLEFFMN
Sbjct: 241 FVHGLHAISSVSNATFKKKVELICSFGITEKECMRMFTSAPVLIRTSVGKLKRGLEFFMN 300

Query: 301 EAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLDK 360
           EA+V +SDIVR P CLMHAMQGRVLPRYRVLQ+V  KRL KKH +LI  LGMSDE+FLDK
Sbjct: 301 EAEVSRSDIVRKPTCLMHAMQGRVLPRYRVLQVVNSKRLSKKHLQLIDILGMSDENFLDK 360

Query: 361 FVCKFPDNMKELLVAFRGDSVGALQPK 388
           FV +FPD + ELL AFRG  +  LQPK
Sbjct: 361 FVHRFPDQVTELLAAFRGQCMDELQPK 387

[Close]

BLAST of CcUC07G137120 vs. ExPASy TrEMBL
Match: A0A6J1C8W1 (uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008506 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.6e-153
Identity = 289/391 (73.91%), Postives = 334/391 (85.42%), Query Frame = 0


Query: 1   MYALRPSFSVSSRLNPPSFLRIDPFLYYFF-SSSSQTQASASNGVVIQYLIDTFQLSPAR 60
           MYALR  FS+S+R   P    IDP L YFF SSSS+ +ASA+N +V+QYL+D F LS AR
Sbjct: 1   MYALRSIFSLSARHCHP----IDPPLCYFFSSSSSRREASAANAIVVQYLVDNFNLSTAR 60

Query: 61  AVSIMSTRRGLQSTEKPQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFF 120
           A++IMS R+G++STEKP+SV +YLSELGFSDAHI+SAIRI+PQIAFSS+EKTLKPKIEFF
Sbjct: 61  ALAIMSCRKGVESTEKPRSVCKYLSELGFSDAHIQSAIRISPQIAFSSVEKTLKPKIEFF 120

Query: 121 QNLGLVGSDLGKFISRHSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAI 180
           QNLGLVGSDLGKFIS HS LLTVSL+ KL PSVEILKNVF KD  N+++L VM+RCS  +
Sbjct: 121 QNLGLVGSDLGKFISNHSSLLTVSLKNKLRPSVEILKNVFPKDEDNSNLLQVMRRCSDIL 180

Query: 181 MRSPCKRLSVNINYLQSCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTK 240
           MR P  RL VNINY +SCGIVDSQLSMLLKRQP LF  RESRV+D+VSM VETGFSTNTK
Sbjct: 181 MRCPESRLLVNINYFRSCGIVDSQLSMLLKRQPVLFGRRESRVRDLVSMAVETGFSTNTK 240

Query: 241 MFVHGLHAISSVSNATFNKKVELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFM 300
           MFVHGLHAISSVSNATF KKVELICSFG TEKECM+MFTSAPVL+RTSI KLK G+EFFM
Sbjct: 241 MFVHGLHAISSVSNATFKKKVELICSFGFTEKECMKMFTSAPVLIRTSIAKLKTGIEFFM 300

Query: 301 NEAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLKRLKKKHPKLIATLGMSDEDFLD 360
           NEAKV +S IVR P  LMH+MQGRVLPRYRVLQ+VK KRL +K+P+L+ TLG+S+EDF D
Sbjct: 301 NEAKVSRSLIVRRPTSLMHSMQGRVLPRYRVLQVVKSKRLTRKNPELVDTLGISEEDFFD 360

Query: 361 KFVCKFPDNMKELLVAFRGDSVGALQPKELA 391
           KFV +FPDN+++LLVA+ G  V AL+ KELA
Sbjct: 361 KFVYRFPDNVEDLLVAYSGQCVDALRRKELA 387

[Close]

BLAST of CcUC07G137120 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 246.1 bits (627), Expect = 4.6e-65
Identity = 138/363 (38.02%), Postives = 229/363 (63.09%), Query Frame = 0


Query: 21  RIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARAVSIMSTRRGLQSTEKPQSVY 80
           R D  L     SS+ T AS SN   +++L D     P  A++I      L+S E+P+SV 
Sbjct: 17  RWDRALSLHHFSSNATPASISNPAFVEFLRDNGFQKPL-AIAIAMRYPNLKSLEQPRSVI 76

Query: 81  RYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSGLL 140
           + L    FSD  I+ +IR+ P++ F ++EK L+PK+ FF+++G  GS LGKF+S++S ++
Sbjct: 77  QMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVV 136

Query: 141 TVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIM-RSPCKRLSVNINYLQSCGI 200
            VSL KKL+P+VEILK++      + D+ +++ RC + ++ R P   L  NI+YL++CGI
Sbjct: 137 GVSLVKKLIPTVEILKSIVAPK--HEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGI 196

Query: 201 VDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKK 260
           V SQL+ LL+RQP +F   E +++  VS  ++ GF+ N++M VH + ++SS+S  TF++K
Sbjct: 197 VGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRK 256

Query: 261 VELICSFGITEKECMRMFTSAPVLVRTSIGKLKLGLEFFMNEAKVGKSDIVRNPACLMHA 320
           V+L  + G +E E   +   +P L+R S  KL LG EF++    + +  + + P  L + 
Sbjct: 257 VKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYN 316

Query: 321 MQGRVLPRYRVLQIVKLKRL----KKKHPKLIATLGMSDEDFLDKFVCKFPDNM-KELLV 378
           ++ RV+PR +VLQI++ K L    +KK   ++  + M++E FL+K+V +F D + +ELLV
Sbjct: 317 LEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLV 376

[Close]

BLAST of CcUC07G137120 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 147.1 bits (370), Expect = 2.9e-35
Identity = 99/347 (28.53%), Postives = 170/347 (48.99%), Query Frame = 0


Query: 31  SSSSQTQASASNGVVIQYLIDTFQLSPARAVSIMSTRRGLQSTEKPQSVYRYLSELGFSD 90
           S + + Q        + YL+D+  LS   A S  S    L S++KP SV     + GF++
Sbjct: 44  SENLEKQKPCLESFTVSYLVDSCGLSLESAKS-NSRFVKLVSSKKPDSVLALFKDHGFTN 103

Query: 91  AHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSGLLTVSLEKKLVP 150
             I S I+  P++   S E  + PK+ FF ++G   SD  K IS    +L+ SL K+L+P
Sbjct: 104 DQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIP 163

Query: 151 SVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLSVNINYLQSCGIVDSQLSMLLKR 210
             + LK++  ++      L    RC +++  + C  +S+ ++  +  G+ D  +  L++ 
Sbjct: 164 CYDSLKSILVEEESVVKCLKRGIRC-FSLKITHC--VSLRVSICRELGVPDKSIKWLVQA 223

Query: 211 QPGLFCNRESRVKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKKVELICSFGITE 270
            P  F +RE R  ++++ V   GF      FVH + A    S +   +K +L   FG ++
Sbjct: 224 SPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSK 283

Query: 271 KECMRMFTSAPVLVRTSIGKLKLGLEFFMNEAKVGKSDIVRNPACLMHAMQGRVLPRYRV 330
           ++ +      P  V  S  K+   LE+ +N   +   DIV  P  L  +M+ R+ PR +V
Sbjct: 284 EDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQV 343

Query: 331 LQIVKLKRL-KKKHPKLIATLGMSDEDFLDKFVCKFPDNMKELLVAF 377
           + ++  K L KK+       L +   +F+DKFV K+ D M +L+  F
Sbjct: 344 ISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of CcUC07G137120 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.6e-20
Identity = 96/403 (23.82%), Postives = 165/403 (40.94%), Query Frame = 0


Query: 29  FFSSSSQTQASASNG-----VVIQYLIDTFQLSPARAVSIMSTRRGLQSTEKPQSVYRYL 88
           F SS+     S+ +G       + YL+D+  L+   A SI S +    +   P SV   L
Sbjct: 37  FSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESI-SMKVSFDNKGNPDSVLSLL 96

Query: 89  SELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSGLLTVS 148
              GF+D+ I + IR  P++     EK+L PK++F Q++G   S+L + +S    +L   
Sbjct: 97  RSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKR 156

Query: 149 LEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLSV-NINYLQSCGIVDS 208
             K L    + +K +   D  +      +++  +++     +   + N+  L+  G+   
Sbjct: 157 KGKSLSRYYDFVKVIIEADKSSK-----LEKLCHSLPEGSKQENKIRNLLVLREMGVPQR 216

Query: 209 QLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKMFVHGLHAISSVSN--------- 268
            L  LL    G  C +E + K+ +   VE GF   T  FV  L+ +  +S+         
Sbjct: 217 LLFSLLISDAGDVCGKE-KFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNA 276

Query: 269 ------------ATFNK--------------KVELICSFGITEKECMRMFTSAPVLVRTS 328
                       A F K               VE     G +  E + M    P  +  S
Sbjct: 277 CKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYS 336

Query: 329 IGKLKLGLEFFMNEAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLK-RLKKKHPKL 388
              +K   EF + E       +   P  L ++++ R +PR  V++++  K  L+ + P +
Sbjct: 337 TELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPI 396

[Close]

BLAST of CcUC07G137120 vs. TAIR 10
Match: AT1G62010.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.9e-18
Identity = 98/410 (23.90%), Postives = 169/410 (41.22%), Query Frame = 0


Query: 18  SFLRIDPFLYYFFSSSSQTQASASNGVVIQYLIDTFQLSPARAVSIMSTRRGLQSTEK-- 77
           + L+ + F  Y FSS+S    S           +TF+ S      + S R   + T+K  
Sbjct: 22  NLLQNESFSSYSFSSASAADVSPKG--------ETFKSSS----FLDSLRLATKLTDKGN 81

Query: 78  PQSVYRYLSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISR 137
             SV   L   GF+D+ I S IR   ++   +   +L  K++F Q+ G   S+L + +S 
Sbjct: 82  SDSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSELTEVVST 141

Query: 138 HSGLLTVSLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLSVNINYLQ 197
              +L     K L    + +K +   D  +       ++ S+++ +    R   NI  L+
Sbjct: 142 VPKILGKREGKSLSRYYDFIKVIIEADKSSK-----YEKISHSLAQGNKIR---NILVLR 201

Query: 198 SCGIVDSQLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKMFVHGLHAISSVSNAT 257
             G+   +L +LL  +    C +E +    +  VVE GF   T  FVH LH +  +S+ T
Sbjct: 202 ELGVPQKRLLLLLISKSQPVCGKE-KFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKT 261

Query: 258 FNKKVELICSFGI------------------TEKEC-----------------MRMFTSA 317
             +K+ +  S G                   +EK+                  M MF   
Sbjct: 262 IEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRF 321

Query: 318 PVLVRTSIGKLKLGLEFFMNEAKVGKSDIVRNPACLMHAMQGRVLPRYRVLQIVKLK-RL 377
           P  +  S   +K   EF + E       +   P  L ++++ R +PR  V++++  K  L
Sbjct: 322 PPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLL 381

Query: 378 KKKHPKLIATLGMSDEDFLDKFVCKFPDN--MKELLVAFRGDSVGALQPK 388
           + + P + + L  + E FL+ +V K  D   + EL+  F G+ V     K
Sbjct: 382 ESELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGNRVSLTDQK 410

[Close]

BLAST of CcUC07G137120 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-16
Identity = 98/425 (23.06%), Postives = 176/425 (41.41%), Query Frame = 0


Query: 24  PFLYYFFSSSSQTQASASNGV-VIQYLIDTFQLSPARAVSIMSTRRGLQSTEKPQSVYRY 83
           PF    FSS+    +S       + YL+++  L+   A +I S +   +    P SV   
Sbjct: 32  PFTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETI-SKKVTFEDKVNPDSVLNL 91

Query: 84  LSELGFSDAHIKSAIRITPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSGLLTV 143
           L   GF D+ I   IR  P++  +  EK+L+PK++F ++ G   S++ + +S     +  
Sbjct: 92  LRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSN----VPT 151

Query: 144 SLEKKLVPSVEILKNVFHKDICNNDILLVMQRCSYAIMRSPCKRLSVNINYLQSCGIVDS 203
            L+KK   SV +  + F KDI  +   L    C          R+  NI+ L+  G+   
Sbjct: 152 ILDKKGEESVSLYYD-FVKDIMQDGKSL----CISCPEGKKGNRIR-NISVLRELGVPQK 211

Query: 204 QLSMLLKRQPGLFCNRESRVKDIVSMVVETGFSTNTKMFVHGLHAISSVSNATFNKKV-- 263
            L  LL  +    C +E + ++ +  VV+ GF      FV  LH +  +S  T  +KV  
Sbjct: 212 LLFSLLISRYQPVCGKE-KFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNV 271

Query: 264 ---------------------------------ELICSFGITEKECMRMFTSAPVLVRTS 323
                                            E +   G+ E+E + +  S P  +R+S
Sbjct: 272 YKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSS 331

Query: 324 IGKLK------LGLEFFMNEAKV------------GKS-----------------DIVRN 377
             K+       LGL F  ++ K+            G++                  +V  
Sbjct: 332 EQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMI 391

The following BLAST results are available for this feature:

BLAST of CcUC07G137120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888519.1	8.4e-178	83.94	transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida]	[more]
KAG7015351.1	3.1e-172	80.31	Transcription termination factor MTERF8, chloroplastic, partial [Cucurbita argyr...	[more]
XP_038877857.1	1.5e-171	79.85	transcription termination factor MTERF2, chloroplastic-like isoform X1 [Benincas...	[more]
XP_022984673.1	2.0e-171	79.54	uncharacterized protein LOC111482884 isoform X1 [Cucurbita maxima] >XP_022984674...	[more]
XP_023552363.1	2.9e-170	79.28	transcription termination factor MTEF1, chloroplastic-like [Cucurbita pepo subsp...	[more]

BLAST of CcUC07G137120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	7.0e-10	22.36	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q84X53	6.1e-06	29.73	Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9SZL6	8.0e-06	26.43	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
F4IHL3	1.0e-05	27.40	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9FM80	7.5e-04	22.88	Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O...	[more]

BLAST of CcUC07G137120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JB80	9.7e-172	79.54	uncharacterized protein LOC111482884 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EN21	3.1e-170	79.54	uncharacterized protein LOC111435860 OS=Cucurbita moschata OX=3662 GN=LOC1114358...	[more]
A0A6J1END2	4.1e-170	79.28	uncharacterized protein LOC111436067 OS=Cucurbita moschata OX=3662 GN=LOC1114360...	[more]
A0A6J1J5Y4	2.0e-169	80.10	uncharacterized protein LOC111482884 isoform X4 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1C8W1	2.6e-153	73.91	uncharacterized protein LOC111008506 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CcUC07G137120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64950.1	4.6e-65	38.02	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.9e-35	28.53	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	2.6e-20	23.82	Mitochondrial transcription termination factor family protein	[more]
AT1G62010.1	1.9e-18	23.90	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	1.8e-16	23.06	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 94..125 e-value: 0.045 score: 22.9 coord: 169..200 e-value: 140.0 score: 10.5 coord: 239..269 e-value: 1800.0 score: 1.9 coord: 205..235 e-value: 40.0 score: 13.1 coord: 274..305 e-value: 330.0 score: 7.6 coord: 306..337 e-value: 130.0 score: 10.8 coord: 130..162 e-value: 0.66 score: 19.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 166..262 e-value: 2.3E-6 score: 26.8 coord: 250..358 e-value: 4.3E-15 score: 55.5 coord: 82..167 e-value: 3.3E-11 score: 42.7
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 27..378
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 161..371 e-value: 5.7E-36 score: 126.0
None	No IPR available	PANTHER	PTHR13068:SF173	EMB\|CAB62602.1	coord: 27..378

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G137120.1	CcUC07G137120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding