CcUC07G137080 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G137080
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	nuclear transcription factor Y subunit B-like
Location	CicolChr07: 21981059 .. 21981733 (-)
RNA-Seq Expression	CcUC07G137080
Synteny	CcUC07G137080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGTCAGTCCCATCGGCAGCCCCACCTCCGGCAACATCTCGGACAGCTCCACAAAAGAACAGGACAGGTTCCTTCCGATTGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCGAAAGAGACCGTCCAGGAATGTGTGTCGGAATTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGTTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCCCCACCGAACAAATTATTGGTGGGAAATCGGCAAATTCGGTGATGGATTTTCAGAATTTCAATCCTGGGTTTTATTCGTTGGGAAATCAAAATCAAAATCAGGGGAACCAGAAGAGTTTCAATATAATCGATGGCGTTAGATTTGGGGAAAGTTTGAGGAGTTCCAATATGAATGTAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGA

mRNA sequence

ATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGTCAGTCCCATCGGCAGCCCCACCTCCGGCAACATCTCGGACAGCTCCACAAAAGAACAGGACAGGTTCCTTCCGATTGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCGAAAGAGACCGTCCAGGAATGTGTGTCGGAATTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGTTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCCCCACCGAACAAATTATTGGTGGGAAATCGGCAAATTCGGTGATGGATTTTCAGAATTTCAATCCTGGGTTTTATTCGTTGGGAAATCAAAATCAAAATCAGGGGAACCAGAAGAGTTTCAATATAATCGATGGCGTTAGATTTGGGGAAAGTTTGAGGAGTTCCAATATGAATGTAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGA

Coding sequence (CDS)

ATGAGCGGCCACAAACGAAACTTCACCACCACAGCCGCCGTCAGTCCCATCGGCAGCCCCACCTCCGGCAACATCTCGGACAGCTCCACAAAAGAACAGGACAGGTTCCTTCCGATTGCAAACGTGAGCCGAATCATGAAAAAATCTCTTCCGGCGAACGCCAAAATCTCAAAAGAAGCGAAAGAGACCGTCCAGGAATGTGTGTCGGAATTCATCAGCTTCATCACCGGCGAGGCCTCCGACAAGTGCCAAAGGGAAAAACGGAAGACGATCAACGGAGACGATTTGTTGTGGGCGATGACTACTTTGGGATTCGAAAATTACGTCGGCCCTTTGAAGATTTATCTCAACAAATACAGAGAAACAGAGGAAGAGAAACATTCTTTAGCCAGACAGGACGATCCCTCCCTGTCTCCGGCGAAATCCCCCACCGAACAAATTATTGGTGGGAAATCGGCAAATTCGGTGATGGATTTTCAGAATTTCAATCCTGGGTTTTATTCGTTGGGAAATCAAAATCAAAATCAGGGGAACCAGAAGAGTTTCAATATAATCGATGGCGTTAGATTTGGGGAAAGTTTGAGGAGTTCCAATATGAATGTAGTCCATGAAAATGGAGAAGGGAATCGAGCTCGAGCTATGGCGGCTCATCTTCAACAGAGCTCTGGTTGGTGA

Protein sequence

MSGHKRNFTTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQKSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW

Homology

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BLAST of CcUC07G137080 vs. NCBI nr
Match: XP_038898148.1 (nuclear transcription factor Y subunit B-like [Benincasa hispida])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 213/226 (94.25%), Postives = 216/226 (95.58%), Query Frame = 0


Query: 1   MSGHKRNFTTT--AAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK 60
           MSGHKRNFTTT  AAVSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK
Sbjct: 1   MSGHKRNFTTTAAAAVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK 60

Query: 61  EAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNK 120
           EAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLK+YLNK
Sbjct: 61  EAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKMYLNK 120

Query: 121 YRETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGN 180
           YRETEEEKHSLARQDDPSLSPAKS  EQII GKSANSVMDFQNFN GFYSLGNQNQNQGN
Sbjct: 121 YRETEEEKHSLARQDDPSLSPAKSAAEQIISGKSANSVMDFQNFNSGFYSLGNQNQNQGN 180

Query: 181 QKSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           QKSFNIIDGV FGESLR  N+N VHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 QKSFNIIDGVGFGESLRGFNINGVHENGEGNRARAMAAHLQQSSGW 226

[Close]

BLAST of CcUC07G137080 vs. NCBI nr
Match: XP_004149164.1 (nuclear transcription factor Y subunit B [Cucumis sativus] >XP_031745819.1 nuclear transcription factor Y subunit B-like [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 8.9e-108
Identity = 207/225 (92.00%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MSGHKRNF-TTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF  TTA VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGQKRNFMATTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSP KS  E IIGGKSANSVMDFQNFN GFYSLGNQ QNQGNQ
Sbjct: 121 RETEEEKHSLARQEDPSLSPPKSAAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQNQGNQ 180

Query: 181 KSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           KSFNIIDGV FGE+LR  N+N VHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CcUC07G137080 vs. NCBI nr
Match: XP_008453748.1 (PREDICTED: nuclear transcription factor Y subunit B-1-like [Cucumis melo] >KAA0044740.1 nuclear transcription factor Y subunit B-1-like [Cucumis melo var. makuwa] >TYK16723.1 nuclear transcription factor Y subunit B-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107
Identity = 206/225 (91.56%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MSGHKRNF-TTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF TTTA VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK+
Sbjct: 1   MSGQKRNFTTTTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKD 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSPAKS  E IIGGKSANSVMDFQNFN GFYSLGNQ Q+QG+Q
Sbjct: 121 RETEEEKHSLARQEDPSLSPAKSSAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQSQGSQ 180

Query: 181 KSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           KSFNIIDGV FGE+LR  N+N VHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CcUC07G137080 vs. NCBI nr
Match: KAE8637572.1 (hypothetical protein CSA_017849 [Cucumis sativus] >KAE8649163.1 hypothetical protein Csa_014945 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 1.7e-106
Identity = 206/224 (91.96%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MSGHKRNF-TTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF  TTA VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGQKRNFMATTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSP KS  E IIGGKSANSVMDFQNFN GFYSLGNQ QNQGNQ
Sbjct: 121 RETEEEKHSLARQEDPSLSPPKSAAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQNQGNQ 180

Query: 181 KSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSG 224
           KSFNIIDGV FGE+LR  N+N VHENGEGNRARAMAAHLQQSSG
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSG 224

[Close]

BLAST of CcUC07G137080 vs. NCBI nr
Match: XP_022136742.1 (nuclear transcription factor Y subunit B-1-like [Momordica charantia])

HSP 1 Score: 365.5 bits (937), Expect = 3.2e-97
Identity = 193/224 (86.16%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEA 60
           MSGHKRN +T AAVSP+GSPTSG+ISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEA
Sbjct: 1   MSGHKRN-STAAAVSPVGSPTSGDISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEA 60

Query: 61  KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYR 120
           KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYV PLKIYLNKYR
Sbjct: 61  KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVAPLKIYLNKYR 120

Query: 121 ETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQK 180
           ETEEEKHS ARQDD   +P     EQIIGGKSA+SVMDFQNFN GFYSLGNQNQ    QK
Sbjct: 121 ETEEEKHSFARQDDQ--APPPGSAEQIIGGKSASSVMDFQNFNSGFYSLGNQNQTA--QK 180

Query: 181 SFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           SFNIIDGV FGE+ R  N++ VHENGEGNR RAMAAHLQQSSGW
Sbjct: 181 SFNIIDGVGFGENFRGFNVSGVHENGEGNRGRAMAAHLQQSSGW 219

[Close]

BLAST of CcUC07G137080 vs. ExPASy Swiss-Prot
Match: Q0J7P4 (Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=39947 GN=HD5 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-45
Identity = 91/104 (87.50%), Postives = 95/104 (91.35%), Query Frame = 0


Query: 23  GNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDK 82
           G   DS  KEQDRFLPIANVSRIMK+SLPANAKISKE+KETVQECVSEFISF+TGEASDK
Sbjct: 49  GGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEASDK 108

Query: 83  CQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEK 127
           CQREKRKTINGDDLLWAMTTLGFE YVGPLK YLN+YRE E EK
Sbjct: 109 CQREKRKTINGDDLLWAMTTLGFEAYVGPLKSYLNRYREAEGEK 152

[Close]

BLAST of CcUC07G137080 vs. ExPASy Swiss-Prot
Match: O23310 (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NFYB3 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-45
Identity = 93/109 (85.32%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 27  DSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 86
           ++ST+EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQRE
Sbjct: 16  NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 75

Query: 87  KRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLA-RQDD 135
           KRKTINGDDLLWAMTTLGFE+YV PLK+YL KYRE E EK + A RQ D
Sbjct: 76  KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGD 124

[Close]

BLAST of CcUC07G137080 vs. ExPASy Swiss-Prot
Match: Q75IZ7 (Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB8 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-43
Identity = 89/119 (74.79%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 28  SSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 87
           SS +EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQREK
Sbjct: 20  SSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 79

Query: 88  RKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPSLSPAKSPTEQ 147
           RKTINGDDLLWAMTTLGFE+YV PLK YL+K+RE E E+ + +     + + + +P +Q
Sbjct: 80  RKTINGDDLLWAMTTLGFEDYVDPLKHYLHKFREIEGERAAASTTGAGTSAASTTPPQQ 138

[Close]

BLAST of CcUC07G137080 vs. ExPASy Swiss-Prot
Match: Q69J40 (Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYB10 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-43
Identity = 85/99 (85.86%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 28  SSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQREK 87
           +S +EQDRFLPIANVSRIMK++LPANAKISK+AKETVQECVSEFISFITGEASDKCQREK
Sbjct: 18  ASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFISFITGEASDKCQREK 77

Query: 88  RKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEK 127
           RKTINGDDLLWAMTTLGFE+Y+ PLK+YL+K+RE E EK
Sbjct: 78  RKTINGDDLLWAMTTLGFEDYIDPLKLYLHKFRELEGEK 116

[Close]

BLAST of CcUC07G137080 vs. ExPASy Swiss-Prot
Match: Q9FGJ3 (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NFYB2 PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.0e-43
Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 26  SDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 85
           S  S +EQDRFLPIANVSRIMKK+LPANAKISK+AKET+QECVSEFISF+TGEASDKCQ+
Sbjct: 21  SSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQK 80

Query: 86  EKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLAR 132
           EKRKTINGDDLLWAMTTLGFE+YV PLK+YL ++RE E E+  L R
Sbjct: 81  EKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGR 126

[Close]

BLAST of CcUC07G137080 vs. ExPASy TrEMBL
Match: A0A0A0KXV6 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G037610 PE=3 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 4.3e-108
Identity = 207/225 (92.00%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MSGHKRNF-TTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF  TTA VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE
Sbjct: 1   MSGQKRNFMATTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSP KS  E IIGGKSANSVMDFQNFN GFYSLGNQ QNQGNQ
Sbjct: 121 RETEEEKHSLARQEDPSLSPPKSAAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQNQGNQ 180

Query: 181 KSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           KSFNIIDGV FGE+LR  N+N VHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CcUC07G137080 vs. ExPASy TrEMBL
Match: A0A5D3CXU2 (Nuclear transcription factor Y subunit B-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005600 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.6e-108
Identity = 206/225 (91.56%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MSGHKRNF-TTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF TTTA VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK+
Sbjct: 1   MSGQKRNFTTTTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKD 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSPAKS  E IIGGKSANSVMDFQNFN GFYSLGNQ Q+QG+Q
Sbjct: 121 RETEEEKHSLARQEDPSLSPAKSSAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQSQGSQ 180

Query: 181 KSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           KSFNIIDGV FGE+LR  N+N VHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CcUC07G137080 vs. ExPASy TrEMBL
Match: A0A1S3BY72 (nuclear transcription factor Y subunit B-1-like OS=Cucumis melo OX=3656 GN=LOC103494392 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 9.6e-108
Identity = 206/225 (91.56%), Postives = 213/225 (94.67%), Query Frame = 0


Query: 1   MSGHKRNF-TTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKE 60
           MSG KRNF TTTA VSP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISK+
Sbjct: 1   MSGQKRNFTTTTAVVSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKD 60

Query: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120
           AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY
Sbjct: 61  AKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKY 120

Query: 121 RETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQ 180
           RETEEEKHSLARQ+DPSLSPAKS  E IIGGKSANSVMDFQNFN GFYSLGNQ Q+QG+Q
Sbjct: 121 RETEEEKHSLARQEDPSLSPAKSSAEHIIGGKSANSVMDFQNFNSGFYSLGNQIQSQGSQ 180

Query: 181 KSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           KSFNIIDGV FGE+LR  N+N VHENGEGNRARAMAAHLQQSSGW
Sbjct: 181 KSFNIIDGVGFGENLRGFNINGVHENGEGNRARAMAAHLQQSSGW 225

[Close]

BLAST of CcUC07G137080 vs. ExPASy TrEMBL
Match: A0A6J1C6A6 (nuclear transcription factor Y subunit B-1-like OS=Momordica charantia OX=3673 GN=LOC111008372 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.5e-97
Identity = 193/224 (86.16%), Postives = 201/224 (89.73%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEA 60
           MSGHKRN +T AAVSP+GSPTSG+ISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEA
Sbjct: 1   MSGHKRN-STAAAVSPVGSPTSGDISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEA 60

Query: 61  KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYR 120
           KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYV PLKIYLNKYR
Sbjct: 61  KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVAPLKIYLNKYR 120

Query: 121 ETEEEKHSLARQDDPSLSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQK 180
           ETEEEKHS ARQDD   +P     EQIIGGKSA+SVMDFQNFN GFYSLGNQNQ    QK
Sbjct: 121 ETEEEKHSFARQDDQ--APPPGSAEQIIGGKSASSVMDFQNFNSGFYSLGNQNQTA--QK 180

Query: 181 SFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
           SFNIIDGV FGE+ R  N++ VHENGEGNR RAMAAHLQQSSGW
Sbjct: 181 SFNIIDGVGFGENFRGFNVSGVHENGEGNRGRAMAAHLQQSSGW 219

[Close]

BLAST of CcUC07G137080 vs. ExPASy TrEMBL
Match: A0A6J1IZK6 (nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=LOC111481354 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.2e-95
Identity = 191/233 (81.97%), Postives = 199/233 (85.41%), Query Frame = 0


Query: 1   MSGHKRNFTTTAAVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEA 60
           M+GHKRN TT    SP+GSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLP NAKISKEA
Sbjct: 1   MNGHKRNPTTATISSPVGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPVNAKISKEA 60

Query: 61  KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYR 120
           KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYV  LK YLNKYR
Sbjct: 61  KETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVSTLKTYLNKYR 120

Query: 121 ETEEEKHSLARQDDPSLSPAKS-----PTEQIIGGKSANSVMDFQNFNPGFYSLG----N 180
           ETEEEKHSLARQDD S SPAKS       E IIGGKSANSVMDFQN N GFYSLG    N
Sbjct: 121 ETEEEKHSLARQDDHSPSPAKSTAAVCSAEPIIGGKSANSVMDFQNLNSGFYSLGAHNHN 180

Query: 181 QNQNQGNQKSFNIIDGVRFGESLRSSNMNVVHENGEGNRARAMAAHLQQSSGW 225
            N + GNQKS++IIDGV FGE+LR  N++ VHEN EGNR RAMAAHLQQSSGW
Sbjct: 181 HNHHPGNQKSYHIIDGVGFGENLRGFNLSAVHEN-EGNRGRAMAAHLQQSSGW 232

[Close]

BLAST of CcUC07G137080 vs. TAIR 10
Match: AT4G14540.1 (nuclear factor Y, subunit B3 )

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-46
Identity = 93/109 (85.32%), Postives = 101/109 (92.66%), Query Frame = 0


Query: 27  DSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQRE 86
           ++ST+EQDRFLPIANVSRIMKK+LPANAKISK+AKETVQECVSEFISFITGEASDKCQRE
Sbjct: 16  NASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQRE 75

Query: 87  KRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLA-RQDD 135
           KRKTINGDDLLWAMTTLGFE+YV PLK+YL KYRE E EK + A RQ D
Sbjct: 76  KRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGD 124

[Close]

BLAST of CcUC07G137080 vs. TAIR 10
Match: AT5G47640.1 (nuclear factor Y, subunit B2 )

HSP 1 Score: 175.3 bits (443), Expect = 5.7e-44
Identity = 85/106 (80.19%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 26  SDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFITGEASDKCQR 85
           S  S +EQDRFLPIANVSRIMKK+LPANAKISK+AKET+QECVSEFISF+TGEASDKCQ+
Sbjct: 21  SSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQK 80

Query: 86  EKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLAR 132
           EKRKTINGDDLLWAMTTLGFE+YV PLK+YL ++RE E E+  L R
Sbjct: 81  EKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGR 126

[Close]

BLAST of CcUC07G137080 vs. TAIR 10
Match: AT2G13570.1 (nuclear factor Y, subunit B7 )

HSP 1 Score: 172.9 bits (437), Expect = 2.8e-43
Identity = 97/169 (57.40%), Postives = 114/169 (67.46%), Query Frame = 0


Query: 18  GSPTS-GNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFISFIT 77
           GSP+S  N ++++ KEQDRFLPIANV RIMKK LP N KISK+AKETVQECVSEFISF+T
Sbjct: 21  GSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVT 80

Query: 78  GEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQDDPS 137
           GEASDKCQREKRKTINGDD++WA+TTLGFE+YV PLK+YL KYR+TE EK          
Sbjct: 81  GEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK---------- 140

Query: 138 LSPAKSPTEQIIGGKSANSVMDFQNFNPGFYSLGNQNQNQGNQKSFNII 186
                SP +Q    +        Q  N   Y    Q+QN  N    + I
Sbjct: 141 ---VNSPKQQ----QQRQQQQQIQQQNHHNYQFQEQDQNNNNMSCTSYI 172

[Close]

BLAST of CcUC07G137080 vs. TAIR 10
Match: AT2G38880.2 (nuclear factor Y, subunit B1 )

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 81/124 (65.32%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 13  AVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFI 72
           A +P      G  S  S +EQDR+LPIAN+SRIMKK+LP N KI K+AK+TVQECVSEFI
Sbjct: 2   ADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFI 61

Query: 73  SFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQ 132
           SFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+ PLKIYL +YRE E +     + 
Sbjct: 62  SFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKS 121

Query: 133 DDPS 137
            D S
Sbjct: 122 GDGS 125

[Close]

BLAST of CcUC07G137080 vs. TAIR 10
Match: AT2G38880.3 (nuclear factor Y, subunit B1 )

HSP 1 Score: 163.3 bits (412), Expect = 2.2e-40
Identity = 81/124 (65.32%), Postives = 95/124 (76.61%), Query Frame = 0


Query: 13  AVSPIGSPTSGNISDSSTKEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECVSEFI 72
           A +P      G  S  S +EQDR+LPIAN+SRIMKK+LP N KI K+AK+TVQECVSEFI
Sbjct: 2   ADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFI 61

Query: 73  SFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKIYLNKYRETEEEKHSLARQ 132
           SFIT EASDKCQ+EKRKT+NGDDLLWAM TLGFE+Y+ PLKIYL +YRE E +     + 
Sbjct: 62  SFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKS 121

Query: 133 DDPS 137
            D S
Sbjct: 122 GDGS 125

The following BLAST results are available for this feature:

BLAST of CcUC07G137080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898148.1	1.3e-111	94.25	nuclear transcription factor Y subunit B-like [Benincasa hispida]	[more]
XP_004149164.1	8.9e-108	92.00	nuclear transcription factor Y subunit B [Cucumis sativus] >XP_031745819.1 nucle...	[more]
XP_008453748.1	2.0e-107	91.56	PREDICTED: nuclear transcription factor Y subunit B-1-like [Cucumis melo] >KAA00...	[more]
KAE8637572.1	1.7e-106	91.96	hypothetical protein CSA_017849 [Cucumis sativus] >KAE8649163.1 hypothetical pro...	[more]
XP_022136742.1	3.2e-97	86.16	nuclear transcription factor Y subunit B-1-like [Momordica charantia]	[more]

BLAST of CcUC07G137080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0J7P4	2.9e-45	87.50	Nuclear transcription factor Y subunit B-11 OS=Oryza sativa subsp. japonica OX=3...	[more]
O23310	2.9e-45	85.32	Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q75IZ7	3.6e-43	74.79	Nuclear transcription factor Y subunit B-8 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q69J40	3.6e-43	85.86	Nuclear transcription factor Y subunit B-10 OS=Oryza sativa subsp. japonica OX=3...	[more]
Q9FGJ3	8.0e-43	80.19	Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CcUC07G137080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXV6	4.3e-108	92.00	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0376...	[more]
A0A5D3CXU2	9.6e-108	91.56	Nuclear transcription factor Y subunit B-1-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BY72	9.6e-108	91.56	nuclear transcription factor Y subunit B-1-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1C6A6	1.5e-97	86.16	nuclear transcription factor Y subunit B-1-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1IZK6	7.2e-95	81.97	nuclear transcription factor Y subunit B-1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CcUC07G137080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14540.1	2.1e-46	85.32	nuclear factor Y, subunit B3	[more]
AT5G47640.1	5.7e-44	80.19	nuclear factor Y, subunit B2	[more]
AT2G13570.1	2.8e-43	57.40	nuclear factor Y, subunit B7	[more]
AT2G38880.2	2.2e-40	65.32	nuclear factor Y, subunit B1	[more]
AT2G38880.3	2.2e-40	65.32	nuclear factor Y, subunit B1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 112..132
None	No IPR available	PRINTS	PR00615	CCAATSUBUNTA	coord: 83..101 score: 38.52 coord: 102..120 score: 41.63 coord: 64..82 score: 50.24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR11064:SF98	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11	coord: 17..185
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 36..100 e-value: 6.5E-27 score: 93.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 23..154 e-value: 4.8E-47 score: 161.3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 33..135
IPR027113	Transcription factor NFYB/HAP3	PANTHER	PTHR11064	CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED	coord: 17..185
IPR003956	Transcription factor, NFYB/HAP3, conserved site	PROSITE	PS00685	NFYB_HAP3	coord: 67..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G137080.1	CcUC07G137080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding