CcUC07G136510 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G136510
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	D111/G-patch domain-containing protein
Location	CicolChr07: 20923642 .. 20929523 (-)
RNA-Seq Expression	CcUC07G136510
Synteny	CcUC07G136510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGTGCAGCTGCAGCCCCTATTCGCCTATTCTCTGGCCGTGGGTGTGGGTTTCTACTAGTGATCTTCTAAGGCAAATTGGCCCCCTCCAGCTGCAGCCCCCTCTCGCTGTACGTTCCTTTAGCTATAGGCGTGTCCAATCCGATAAGAATTCGTTCCACATAGTGCAAGAAAGTTCCGGTGTGAACTCCCCCCTTTAAGAGATAGTCTGACTCCAGCAGATTCTGGAGAAGCCAATTCTCTCTCTCGATCTACTTTACCGACAAGAGCTCTGAATGAATGAGCAATGAGTTTGTTTGATTCTAACTATTCAAAGCAGAGGAAATCGAATATTATATAGCTATAGGGCTAGGTTCCGCTCCTCGCTCGAGCTACCAGCTATCTTAGATTGAATTCCTGTTGACTAATCCGAGTCCTTGAGAGCTTAGACATCAGCGGGGAAGAACTCCGAAAGAATTTCATCGGCTCCTCTCCCTATCGGTCGAGCTGCGAAGCTCCTCCTCCCTCTTCAATCGGGTGATTACGGCCTGAAGGATCGAAAAAATGTGGCTTAGGATTTCTATATCGACTTTCATTCACTCCCCACTTTCAAGTCATTGTTAGGTAAAGCATCTCTAGCAGACGCAATCAGTGAATCTTCTTAGTCTCTCGGAGAAAGGTAGCGAAGTACGAGTTCTCAATTCCGATTCTTTCAATTTCCTTACATTCTAGCTGAAAGAGAGACTTGACCTTTACTTAGAGAGGGGCTACGGTACCACGCTCTTCCGTGCTCGTAGGTTGACTTCCCTATGCATCCCGACTAAGGTCTCACAAACGTGCACTTCCCTTATGCATCCAGCCGCTTCACTAATGTGAATAGGTTATACAGAAGGGTGGGTTGGTTATATACTCTTATGCGCGTTCCTTCTTCGAACCTTTTGGTATGTATTGCCCCCTAACTATAGATCAGATCCACCGAACGAGAAACTCAATTCTGCACTGCTGCGGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGGGGATTGCGTTGGAGGAAATCTACCAAAGAGCCCCGAGTAGTTTACCGAGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCATCATGAGACTGATCGGATCTGCCGTAGACACCCGAGAGACCTCCACAAGGCAAACTCAAAGAGGGTAGGTATAATGCACGCAGGCCAAGTCAAGAAAAGGACTTCCTTACTTGATTTTGAATAATAGTCAACATGACGGGGAGCGCATTAGATATTTTATTTACCTAAACCGGTTTTTTTCGGCACTCGGTTCCCCTCGACTTTGCATCATCAAGTCGACGTTCAGTTTACTTTTTCGATTCGGAACTCTTAGTCGAGCTGATGGCGAGATCGATTTTTTGTTCGAGGTGAAAGAGAAAAAGAGAGGAACCACCGCCCAATGGTGCTTTTACGAAAGAGCTTAACTAATAGGGCCTTTTTCGAGATGTTGAAGAGGTGAGTAAGGGGCTAATACCTTCTCGACACTATCGAACCTTCAATCCACTCTCTATCGCTCTTTTTAGTGGGGAGGAATTGTTTTCGTATCCTGGACTTAAGGAAGGAAAAAAGGCCCCTATCCGCCTTGTTGTGATAGGGGGGGCAGAGTTGTTTGTTTTCAAGTCAAGCTCCGTATCCACTCATGCATAGCTTCGACTAAGAATAATAATACAAGGGAGTCTTCTTCTTCGAAGTCGCCCTAGGTTCCGATCCACCATCGGTGAGACCCCTCTTGCTTAAGTACTGGTTCCCTTCACTAAAAGAAAGAACTCGTTGGGACCTCGTCTCTTTGAGAAACTTAATAATACAATGAACATGTGTTTGGCCCCGCATTCTAAGGACTAATTGCTATGCTTAGTGTGCGACTCGTCGGTTTTTTTAAGGTTAGGATTCAAACCAAAAAGAAGGATCAGCCCATACATAATCTGAACTAATAATTATAAAACTAATAACCAACTCATCGCTTCGCATTATCTGGATCTAAAAAACCAACCAGTCAAGATATGTTATATTGGTCATATCATTGTAGCAACTGAAATCTTTTTTGCATAAAAAAACAATTTGATTATGAGTTGTGAAGCAATAAAAGTATGCGGATAAATGGAAGGGTGAAAGAAAGAGAGAAAAAGAATATGAATGATATATGATTCCAATATGTAATATGTAAGGTCTATGGGTCATCTCATAAAAGGTAGTGTAATAAAGCTTTAAGACGGATGGATTCATAATTAGATGAATCTGTTCATAGAACAAAAAGCCAAGAGCCCCGAGACAATAAAGACTGAGAAGATTGACTCAAAAACAAATTTTATTAAGACAAAAAAGAGATTATTATTTCATTTCAATAGCTGCGGAAAAAAGAGGACGTCGTCGGTTGGTTGGTTTGTCGGCATTTAGCCGTTTTTTTCTTGTTTTCTTACTTACGCAAATTGCCCGCTATGTAGTTTGTTTGCCCGCAGCTTCCCTACGTCCCCCCTTTCTACTTCATCGTCGTAGGTCCTTCTGCACTGCTTGATCCGTTCATTCGTCACCGTACCTTTTCAATGAAAGAAGACGAGGTATATGCGCTTAGTCCCCGAGTGGATTCTGTGCTTCTTGCCAATGGCTCGCTTCGAAAGACAGAATTCTTCTTTATATATAAAATTATGAATCATCTTGCTTAGAGATAAGAGTCCCGTGCCAAACTCTCGTCCCTCTCGCGTTACACACAGAAGGTTTTAGCTCTCGTATTGCGGGTTTTCCACTTCGTTCAGTTACATTAGGGCTCTACCCCGCGATAAAGAGAAGAACTGTGAACTAATAGACAAACAAAGATTGAATGCACCCCTTTACCATTCTGTATAAATGGACTCTAAATAAAAAGTCAAGTCAGATATCATACAAAGGTATATCCTTCATTCCTCAAGCGTTGCTAGGAGTTGGGTCTCTGCCTACTCTACGAATTCACATAAAAGGAAGACCTGACTAAACAAGTTTCTGGGTTATTGAAAACCAGGAGACAGAACCGAAGTCGAGGAAGGAGAATCATATGAGTCCTCCTTAATTCACAAAGTCTAAAGTTGACGTTTTAATATCGATTTTATGAAAAAAGAAATAGAAAGCCGAGCAATCAGTTAAGCTCTTTTTATATCTACGGAATCATTAGAACCGCAGGCCCGGCCTGCTGACCCTAAAGACACGAGCTCAACCATTTGAAAAGTAGGAGCAGCTGAGCATATGCTAGAATTAGAATCACGCGTAATGAAGCGCTTGTCTTACTTATCTAAATCATACAAAAACCCTGCTACAAATGAGCGGCATATGAACGGAACGAGACCCTTCGAAAGACGAGACTCAGATCGGGGATAAAAAAGCCCTTTCTTTACGTACTATTCATTTGATGATTTGGAAGATTTTTGATATTCTGCAGGTGCAGATTTGGCGTCGGCCTAAGCTTCTTTATACGTTGGATTTGGTACGAGAGCCTATGCTTTAGGAACAGGCTCAGGCCCCATAGCTTAAGGTGGATCGGATCCTACATACTTGTAACACAGACAGACGCAAAATTGGAAAACAAATCATCAACTTCAACTGCTTCATGCCCCGGATCACGGGTATTCTTATTGTAGTTATAGACCCCACATTGGCTTGGCTACTGGAATCATTTATTCCCCTCTATTCTAGCTTCAGATTTGGCTTAAGCTTCGGATTCTTAAGATTAGGGGGAAACAAGAGCTTTTGGTTTGGATGCTTCGGTGGGCTTTGTATGCTATTTCGGAAGGCATAGAAATAGGATTCCATTTGCATTTCCTAAACAGAAAAAGCATACACATAAGCACCCGAGGATGCCAAATCATCCACTGAGGAGTAAGATTTTTCTGTTTCATCGGGAATCCCCTCCTTTCTTATTAGATTATTAGGTTGATTGGTTTGGAACCCTATACAAGGGGCTGCTTGCTGCTCGCCCCTATTTCTAAGGGGGCTTATGCACTCTACTCGTTACCACTAAACGACGAAGCCTTGAGCGGAAGGAGGGACTTGAACCCTCAACCTTAGCCTTGGCAAGGCTATGCTCTACCATTAAGCTATTTCCGCCAGCTACGGTAGTGGCGAAGCACTACTGAGCAATTCACGTATCACGTCGAGACGGACGACTTATGTTTTTCCGCCGAACCACACTCGTCGACCTCCGATTGAGCTACGAGCATGAGTAGGTATGTGGCTAGGGGGGAGGGGCGGCTGGGCTGCCTTTTCAATCACTCTGACCAAGAACATACGATAACCGGCCTAAAGGGATGCTCCCAGGTTGATGCGATGTATTCCACCAGTTGACTGAAAACTTGATTATTGGTATATCGATCGGTCCAACACGGATTGAAATAGAAGCCGGTTCGACAGGAAGCTTTTGAAAACGCAGTGCACCCAGGTAAATAAGGAACGAGATGAATACAGAGGTTAAACGAGCATCCCACACCCAAAAGGTGCCCCACATAGGTCTTCCCCGAAACCCCCCAGTCACTAAAGTAAACAACGTAAAAAAAGCACCCATTTCTGTACCGGTTCTGGAAGAGCGAAGAAAAAGGGGATGTTTTGTTAATAGGAACAAGAAAGTGTTTATAGCCGTAGCGATATAAACAAGAATACTCATCCGAGTCGCAGGAACATGTACATACAGAATACGAGAATTTCCACCTTGTTGAAGATCTAGTGGTGCTACCCGAAGACTTAAATGAATAGCCATCGCTGTTAAGAACAACCGAGATCCAATGAGAATTTGCGCATAGCTTCTGGTCTTTGACATCAAAAAAGAAGGTTGTAATAACAAAAGAGACATGTGAGAATTTGGTCCTAGCTAGTGGAACAAGAAAGACATGCATCTATATTCAATACACAATCAAAGGATTTCCCTTAACGAAGAATTCCCCCTACTTTGGCTTTGTTTTCGCTCCGCTCGTGCGTGGCACTCCTTGCTCGCGGAGCGGCATACCGAAAAAAGAAAGGTTTTGAAAGAAAAAAAAGTGGATTCCCTTTTGTGACCAAGAGCCCATCCTTGATCCAAGCCGAGTTTTTCATTCCTTAGCTTGGTGCAAAAGGCTTCTCACGGGTCCTTTTTCAAGCCCCCACCCGAACCATTCTTAAGACCACCAAGCCCTCTCGAATGAGTTCGACTATAGAAGCTTTCAACGTACACCCGGGGACAAATCTTTCACTCACTGAGAAGTGAAAACCTGTGACTAGATCGTCCTGAAGACGGATGCGAAGTATAGCGAGGCTTTAGAGGTGAGCCGATAGGCGAACAAGCGTGGCTGTAAAGCGAAGTGGCTGTTTCATTTAATAGTTCATCTGGGCGAGCGAGTTCCATACCCTACACGATGTAGGAGAGCGGGTTAGCGGGAGTTCTTAGTTAGAGTAGTTCAAGCTGTGTGACTAGCTAGCCTAAGGGATGTTCTCCCCACTTCTTCCTCTCTTATTGCTCCTACTATAGATAGAGGACCGGATCTCGAGAGCGAGATGTGATCTTAGATTAGTTACGAGGAAGCCCTTATATTACCTGGGTTGGTTATATACTCTTATGTGCGTTCCTTCTTCGAACCTTTTGGTATGTATTGCCCCCTAACTATAGATCAGATCCACCGGACGAGAAACTCAATTCCGCACTGCTGCGGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGTGGATTGCGTTGGAGGAAATCTACCAAAGAGCCCCGAGTAGTTTACCGGGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCTCACCACTCTATTTTTGA

mRNA sequence

ATGGAATTGTGCAGCTGCAGCCCCTATTCGCCTATTCTCTGGCCGTGGGTGTGGGTTTCTACTAGTGATCTTCTAAGGCAAATTGGCCCCCTCCAGCTGCAGCCCCCTCTCGCTCTGAAAGAGAGACTTGACCTTTACTTAGAGAGGGGCTACGGTACCACGCTCTTCCGTGCTCGTAGGTTGACTTCCCTATGCATCCCGACTAAGATCAGATCCACCGAACGAGAAACTCAATTCTGCACTGCTGCGGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGGGGATTGCGTTGGAGGAAATCTACCAAAGAGCCCCGAGTAGTTTACCGAGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCATCATGAGACTGATCGGATCTGCCGTAGACACCCGAGAGACCTCCACAAGGCAAACTCAAAGAGGGTGCAGATTTGGCGTCGGCCTAAGCTTCTTTATACGTTGGATTTGGTACGAGAGCCTATGCTTTAGGAACAGGCTCAGGCCCCATAGCTTAAGGTGGATCGGATCCTACATACTTGTAACACAGACAGACGCAAAATTGGAAAACAAATCATCAACTTCAACTGCTTCATGCCCCGGATCACGGATCAGATCCACCGGACGAGAAACTCAATTCCGCACTGCTGCGGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGTGGATTGCGTTGGAGGAAATCTACCAAAGAGCCCCGAGTAGTTTACCGGGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCTCACCACTCTATTTTTGA

Coding sequence (CDS)

ATGGAATTGTGCAGCTGCAGCCCCTATTCGCCTATTCTCTGGCCGTGGGTGTGGGTTTCTACTAGTGATCTTCTAAGGCAAATTGGCCCCCTCCAGCTGCAGCCCCCTCTCGCTCTGAAAGAGAGACTTGACCTTTACTTAGAGAGGGGCTACGGTACCACGCTCTTCCGTGCTCGTAGGTTGACTTCCCTATGCATCCCGACTAAGATCAGATCCACCGAACGAGAAACTCAATTCTGCACTGCTGCGGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGGGGATTGCGTTGGAGGAAATCTACCAAAGAGCCCCGAGTAGTTTACCGAGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCATCATGAGACTGATCGGATCTGCCGTAGACACCCGAGAGACCTCCACAAGGCAAACTCAAAGAGGGTGCAGATTTGGCGTCGGCCTAAGCTTCTTTATACGTTGGATTTGGTACGAGAGCCTATGCTTTAGGAACAGGCTCAGGCCCCATAGCTTAAGGTGGATCGGATCCTACATACTTGTAACACAGACAGACGCAAAATTGGAAAACAAATCATCAACTTCAACTGCTTCATGCCCCGGATCACGGATCAGATCCACCGGACGAGAAACTCAATTCCGCACTGCTGCGGAGTCGTCGGACTTATCCACCAAGGGATTCCTTGAATTTCTGTGGATTGCGTTGGAGGAAATCTACCAAAGAGCCCCGAGTAGTTTACCGGGCAAATTGAGTTGTCGTGACGATACCCTTCTTTTCTTAGTGGAAGATCGGAAAAGACTTCTCTTCTCACCACTCTATTTTTGA

Protein sequence

MELCSCSPYSPILWPWVWVSTSDLLRQIGPLQLQPPLALKERLDLYLERGYGTTLFRARRLTSLCIPTKIRSTERETQFCTAAESSDLSTKGFLEFLGIALEEIYQRAPSSLPSKLSCRDDTLLFLVEDRKRLLFIMRLIGSAVDTRETSTRQTQRGCRFGVGLSFFIRWIWYESLCFRNRLRPHSLRWIGSYILVTQTDAKLENKSSTSTASCPGSRIRSTGRETQFRTAAESSDLSTKGFLEFLWIALEEIYQRAPSSLPGKLSCRDDTLLFLVEDRKRLLFSPLYF

Homology

[Close]

BLAST of CcUC07G136510 vs. NCBI nr
Match: KAF4349946.1 (hypothetical protein G4B88_002368 [Cannabis sativa])

HSP 1 Score: 82.0 bits (201), Expect = 9.1e-12
Identity = 57/113 (50.44%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 4   CSCSPYSPILWPWVWVSTSDL---------LRQIGPLQLQPPLALKERLDLYLERGYGTT 63
           C   P SP  +  +   T+ L         L   G + L  PL+         +RG  TT
Sbjct: 26  CGIDPASPSCFYILLDDTAGLSMFYPAFAPLSTTGMVILPAPLSSPAARARSPKRGSNTT 85

Query: 64  LFRARRLTSLCIP-TKIRSTERETQFCTAAESSDLSTKGFLEFLGIALEEIYQ 107
           LFRARRLTSL  P   + ST RETQF TAAESSDLSTKGF+EFL IALEEIYQ
Sbjct: 86  LFRARRLTSLMHPAASLISTRRETQFRTAAESSDLSTKGFVEFLWIALEEIYQ 138

[Close]

BLAST of CcUC07G136510 vs. NCBI nr
Match: KAG6383916.1 (hypothetical protein SASPL_156341 [Salvia splendens] >KAG6384679.1 hypothetical protein SASPL_155534 [Salvia splendens])

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-04
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 227 QFRTAAESSDLSTKGFLEFLWIALEEIYQ 256
           QFRTAAESSDLSTKGF+EFLWIAL EIYQ
Sbjct: 98  QFRTAAESSDLSTKGFVEFLWIALGEIYQ 126

[Close]

BLAST of CcUC07G136510 vs. NCBI nr
Match: GER38990.1 (D111/G-patch domain-containing protein [Striga asiatica])

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-04
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 227 QFRTAAESSDLSTKGFLEFLWIALEEIYQ 256
           QFRTAAESSDLSTKGF+EFLWIAL EIYQ
Sbjct: 261 QFRTAAESSDLSTKGFVEFLWIALGEIYQ 289

[Close]

BLAST of CcUC07G136510 vs. ExPASy TrEMBL
Match: A0A7J6DV99 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002368 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.4e-12
Identity = 57/113 (50.44%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 4   CSCSPYSPILWPWVWVSTSDL---------LRQIGPLQLQPPLALKERLDLYLERGYGTT 63
           C   P SP  +  +   T+ L         L   G + L  PL+         +RG  TT
Sbjct: 26  CGIDPASPSCFYILLDDTAGLSMFYPAFAPLSTTGMVILPAPLSSPAARARSPKRGSNTT 85

Query: 64  LFRARRLTSLCIP-TKIRSTERETQFCTAAESSDLSTKGFLEFLGIALEEIYQ 107
           LFRARRLTSL  P   + ST RETQF TAAESSDLSTKGF+EFL IALEEIYQ
Sbjct: 86  LFRARRLTSLMHPAASLISTRRETQFRTAAESSDLSTKGFVEFLWIALEEIYQ 138

[Close]

BLAST of CcUC07G136510 vs. ExPASy TrEMBL
Match: A0A5A7Q1K2 (D111/G-patch domain-containing protein OS=Striga asiatica OX=4170 GN=STAS_15547 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-04
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 0


Query: 227 QFRTAAESSDLSTKGFLEFLWIALEEIYQ 256
           QFRTAAESSDLSTKGF+EFLWIAL EIYQ
Sbjct: 261 QFRTAAESSDLSTKGFVEFLWIALGEIYQ 289

The following BLAST results are available for this feature:

BLAST of CcUC07G136510 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF4349946.1	9.1e-12	50.44	hypothetical protein G4B88_002368 [Cannabis sativa]	[more]
KAG6383916.1	3.1e-04	93.10	hypothetical protein SASPL_156341 [Salvia splendens] >KAG6384679.1 hypothetical ...	[more]
GER38990.1	3.1e-04	93.10	D111/G-patch domain-containing protein [Striga asiatica]	[more]

BLAST of CcUC07G136510 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G136510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6DV99	4.4e-12	50.44	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002368 PE=4 SV=1	[more]
A0A5A7Q1K2	1.5e-04	93.10	D111/G-patch domain-containing protein OS=Striga asiatica OX=4170 GN=STAS_15547 ...	[more]

BLAST of CcUC07G136510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G136510.1	CcUC07G136510.1	mRNA