CcUC07G136260 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G136260
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr07: 20296115 .. 20296849 (-)
RNA-Seq Expression	CcUC07G136260
Synteny	CcUC07G136260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGTTCTTCTTCCACAAAGCAGAGAAGGATTCGACCCCTATTCCCAGATGCAATCTCCTCCATATCTTCGCCAAGTTCTTCCGTCTCCTAGAGCTTTGTTTTCTACTGCTTTTCCTTTCCTGGACCCTCTCTCGCCTTCCAATCGCCCTCAGAATCTCCGGCGAATATTTCGGAAAACTCTTCGGCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCCCAATTCTCTGCCCGGAAAAGCCCCCAAACCGATCGGCTTTACGAAGACCTAATTGAAAAAACCGGAAACGGAGACCTAACTGATTCGCTCTCGGAGGAAGTGGAGATTGTGTACCAGGACAAACAGATGATTGTGGAGGGGATTAATTCAATGGACCGTGAAATGGAAGTGAAGAACACGGATCTGGAGTCGGAATCAGGATTAGGTCATCCGAAACTGTTAGTGAGGACTCTGTCGGAGAAACTTAACCGAGAATGCGTGAAAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGAGCCGGAATCTGGAGCATTCGCACGACATTTTGTACTACCAGGACGATTTGAGCAGTGAGGAATTCCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCCGCCATTGTTGTGCTCCACTGCGGAGGGTTAGCCTCCGGCTAA

mRNA sequence

ATGGATTTGTTCTTCTTCCACAAAGCAGAGAAGGATTCGACCCCTATTCCCAGATGCAATCTCCTCCATATCTTCGCCAAGTTCTTCCGTCTCCTAGAGCTTTGTTTTCTACTGCTTTTCCTTTCCTGGACCCTCTCTCGCCTTCCAATCGCCCTCAGAATCTCCGGCGAATATTTCGGAAAACTCTTCGGCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCCCAATTCTCTGCCCGGAAAAGCCCCCAAACCGATCGGCTTTACGAAGACCTAATTGAAAAAACCGGAAACGGAGACCTAACTGATTCGCTCTCGGAGGAAGTGGAGATTGTGTACCAGGACAAACAGATGATTGTGGAGGGGATTAATTCAATGGACCGTGAAATGGAAGTGAAGAACACGGATCTGGAGTCGGAATCAGGATTAGGTCATCCGAAACTGTTAGTGAGGACTCTGTCGGAGAAACTTAACCGAGAATGCGTGAAAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGAGCCGGAATCTGGAGCATTCGCACGACATTTTGTACTACCAGGACGATTTGAGCAGTGAGGAATTCCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCCGCCATTGTTGTGCTCCACTGCGGAGGGTTAGCCTCCGGCTAA

Coding sequence (CDS)

ATGGATTTGTTCTTCTTCCACAAAGCAGAGAAGGATTCGACCCCTATTCCCAGATGCAATCTCCTCCATATCTTCGCCAAGTTCTTCCGTCTCCTAGAGCTTTGTTTTCTACTGCTTTTCCTTTCCTGGACCCTCTCTCGCCTTCCAATCGCCCTCAGAATCTCCGGCGAATATTTCGGAAAACTCTTCGGCTTCATCGCCACTCCTCTCTTCGGTTTCCTCCTCTGCAACGCCATCATCGTCGCTCTCGTAGCCAAGCCTTCCCAATTCTCTGCCCGGAAAAGCCCCCAAACCGATCGGCTTTACGAAGACCTAATTGAAAAAACCGGAAACGGAGACCTAACTGATTCGCTCTCGGAGGAAGTGGAGATTGTGTACCAGGACAAACAGATGATTGTGGAGGGGATTAATTCAATGGACCGTGAAATGGAAGTGAAGAACACGGATCTGGAGTCGGAATCAGGATTAGGTCATCCGAAACTGTTAGTGAGGACTCTGTCGGAGAAACTTAACCGAGAATGCGTGAAAACACAGAGTGAGAAGCTCCGGCGATCGGAGACGGAGAAGAGCCGGAATCTGGAGCATTCGCACGACATTTTGTACTACCAGGACGATTTGAGCAGTGAGGAATTCCAGAGGAAGATTGAGGCGTTCATAGCGAAAGAGAAGAAGTTTCGACGGGAAGAATCTTCCGCCATTGTTGTGCTCCACTGCGGAGGGTTAGCCTCCGGCTAA

Protein sequence

MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSARKSPQTDRLYEDLIEKTGNGDLTDSLSEEVEIVYQDKQMIVEGINSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRECVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIVVLHCGGLASG

Homology

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BLAST of CcUC07G136260 vs. NCBI nr
Match: XP_038888396.1 (uncharacterized protein LOC120078241 [Benincasa hispida])

HSP 1 Score: 382.9 bits (982), Expect = 2.1e-102
Identity = 202/247 (81.78%), Postives = 219/247 (88.66%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK S PIPRCNLL IFAKFFR LEL FLLLFLSW LSRLPIAL +S EYFG
Sbjct: 1   MDFFFFDKAEKVSNPIPRCNLLQIFAKFFRFLELSFLLLFLSWILSRLPIALTVSAEYFG 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQF-------SARKSPQTDRLYEDLIEKTGNGD 120
           KLF F+ATPLFGFLLCNAIIVALVAKP+QF       S+  S + DR+YEDLIEKTG+GD
Sbjct: 61  KLFAFVATPLFGFLLCNAIIVALVAKPTQFPRPASSTSSTSSAEADRIYEDLIEKTGSGD 120

Query: 121 LTDSLSEEVEIVYQDKQMIVEGINSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           LTDSLSEEVEIVYQDKQ+I EGINS+DRE+EVKNTDLE+ESGLGH K+++RTLSEKLNRE
Sbjct: 121 LTDSLSEEVEIVYQDKQIIAEGINSIDREIEVKNTDLETESGLGHSKVMLRTLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CV T+ EKLRRSETEK RNLEHS+DILY+QDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVITEREKLRRSETEKCRNLEHSNDILYHQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CcUC07G136260 vs. NCBI nr
Match: XP_008452094.1 (PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 357.8 bits (917), Expect = 7.2e-95
Identity = 200/247 (80.97%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-ARKSPQTDRLYEDLIEKTGNG-DLTDSL 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIEKTG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGLGH K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CcUC07G136260 vs. NCBI nr
Match: KAA0044789.1 (putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [Cucumis melo var. makuwa])

HSP 1 Score: 353.6 bits (906), Expect = 1.4e-93
Identity = 198/247 (80.16%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR+LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-ARKSPQTDRLYEDLIEKTGNG-DLTDSL 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIE TG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGL H K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CcUC07G136260 vs. NCBI nr
Match: XP_011653156.1 (uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical protein Csa_015101 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.2e-91
Identity = 195/246 (79.27%), Postives = 209/246 (84.96%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS EY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFSARKSPQTDRLYEDLIEKTGNG-DLTDSLS 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS R + +T R+YEDLI+KTG G DLTDS S
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 EEV-EIVYQDKQMIVEG----INSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNREC 180
           EEV EIVYQDKQ+I EG      S D E+EVKNTDLESESGLG  K+++R+LSEKLNREC
Sbjct: 121 EEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNREC 180

Query: 181 VKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240
           VKT+SEKLRRSETEK  NLE ++DIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV
Sbjct: 181 VKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240

[Close]

BLAST of CcUC07G136260 vs. NCBI nr
Match: XP_022136879.1 (uncharacterized protein LOC111008461, partial [Momordica charantia])

HSP 1 Score: 332.0 bits (850), Expect = 4.3e-87
Identity = 180/243 (74.07%), Postives = 205/243 (84.36%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPR--CNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEY 60
           MD FFF KAEK  T IPR  CNLL IFAK FR LELC LL+FLSW LSRLP A+RISGEY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSARK-----SPQTDRLYEDLIEKTGNGD 120
           F KLF F+A+PLFGF+LCNAIIVALVAKPSQ S R+       +TDRLYEDLI K+GNGD
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNGD 120

Query: 121 LTDSLSEEVEIVYQDKQMIVEGINSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           L +S SE+ EIV+QDK++I E INS+DR++EVK+TD E+ESG+ HPK++ RTLSEK+ RE
Sbjct: 121 LPESPSEDGEIVFQDKEIIAEAINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSEKIKRE 180

Query: 181 CVKTQSEKLRRSETEKSRN-LEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSA 236
           C KTQSEKLRRSETEK RN LE SHDI+YYQDDLSSEEFQRKIEAFIA+EKKFRREESSA
Sbjct: 181 CSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRREESSA 240

[Close]

BLAST of CcUC07G136260 vs. ExPASy TrEMBL
Match: A0A5D3CYU3 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005060 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.5e-95
Identity = 200/247 (80.97%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-ARKSPQTDRLYEDLIEKTGNG-DLTDSL 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIEKTG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGLGH K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CcUC07G136260 vs. ExPASy TrEMBL
Match: A0A1S3BT40 (uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.5e-95
Identity = 200/247 (80.97%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-ARKSPQTDRLYEDLIEKTGNG-DLTDSL 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIEKTG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIEKTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGLGH K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLGHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CcUC07G136260 vs. ExPASy TrEMBL
Match: A0A5A7TU70 (Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00800 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 6.6e-94
Identity = 198/247 (80.16%), Postives = 213/247 (86.23%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR+LEL FLLL LSW  SRLPIALRIS +YF 
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRVLELSFLLLSLSWIFSRLPIALRISADYFT 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFS-ARKSPQTDRLYEDLIEKTGNG-DLTDSL 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS    S QTDR+YEDLIE TG G DLTDS 
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRPATSDQTDRIYEDLIENTGTGSDLTDSA 120

Query: 121 SEEV-EIVYQDKQMIVEG----INSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           SEEV EIVYQDK++I EG      S D E+E+KNTDLES+SGL H K+++R+LSEKLNRE
Sbjct: 121 SEEVEEIVYQDKEIIAEGRVGSNYSTDCEIELKNTDLESDSGLDHSKVILRSLSEKLNRE 180

Query: 181 CVKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240
           CVKTQSEKLRRSETEK RNLE+S+DILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI
Sbjct: 181 CVKTQSEKLRRSETEKCRNLEYSNDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAI 240

[Close]

BLAST of CcUC07G136260 vs. ExPASy TrEMBL
Match: A0A0A0KY10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.1e-91
Identity = 195/246 (79.27%), Postives = 209/246 (84.96%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFG 60
           MD FFF KAEK STPIPRCNLL IF+KFFR LEL FLLL LSW  SRLPIALRIS EY  
Sbjct: 1   MDFFFFDKAEKLSTPIPRCNLLQIFSKFFRFLELSFLLLSLSWIFSRLPIALRISAEYST 60

Query: 61  KLFGFIATPLFGFLLCNAIIVALVAKPSQFSARKSPQTDRLYEDLIEKTGNG-DLTDSLS 120
           KLF FIATPLFGFLLCNAIIVALVAKPSQFS R + +T R+YEDLI+KTG G DLTDS S
Sbjct: 61  KLFAFIATPLFGFLLCNAIIVALVAKPSQFSRRPTSETHRIYEDLIDKTGTGSDLTDSAS 120

Query: 121 EEV-EIVYQDKQMIVEG----INSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNREC 180
           EEV EIVYQDKQ+I EG      S D E+EVKNTDLESESGLG  K+++R+LSEKLNREC
Sbjct: 121 EEVEEIVYQDKQIIAEGRVGSNYSTDCEIEVKNTDLESESGLGQSKVILRSLSEKLNREC 180

Query: 181 VKTQSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240
           VKT+SEKLRRSETEK  NLE ++DIL YQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV
Sbjct: 181 VKTKSEKLRRSETEKCGNLECTNDILCYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 240

[Close]

BLAST of CcUC07G136260 vs. ExPASy TrEMBL
Match: A0A6J1C5K3 (uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008461 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.1e-87
Identity = 180/243 (74.07%), Postives = 205/243 (84.36%), Query Frame = 0


Query: 1   MDLFFFHKAEKDSTPIPR--CNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEY 60
           MD FFF KAEK  T IPR  CNLL IFAK FR LELC LL+FLSW LSRLP A+RISGEY
Sbjct: 1   MDFFFFDKAEKPPTAIPRSSCNLLQIFAKVFRFLELCLLLVFLSWILSRLPFAVRISGEY 60

Query: 61  FGKLFGFIATPLFGFLLCNAIIVALVAKPSQFSARK-----SPQTDRLYEDLIEKTGNGD 120
           F KLF F+A+PLFGF+LCNAIIVALVAKPSQ S R+       +TDRLYEDLI K+GNGD
Sbjct: 61  FTKLFAFVASPLFGFILCNAIIVALVAKPSQLSGRRVAVGDGGETDRLYEDLIVKSGNGD 120

Query: 121 LTDSLSEEVEIVYQDKQMIVEGINSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE 180
           L +S SE+ EIV+QDK++I E INS+DR++EVK+TD E+ESG+ HPK++ RTLSEK+ RE
Sbjct: 121 LPESPSEDGEIVFQDKEIIAEAINSIDRDVEVKSTDPEAESGIDHPKVIRRTLSEKIKRE 180

Query: 181 CVKTQSEKLRRSETEKSRN-LEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSA 236
           C KTQSEKLRRSETEK RN LE SHDI+YYQDDLSSEEFQRKIEAFIA+EKKFRREESSA
Sbjct: 181 CSKTQSEKLRRSETEKCRNILEQSHDIVYYQDDLSSEEFQRKIEAFIAREKKFRREESSA 240

[Close]

BLAST of CcUC07G136260 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 116.7 bits (291), Expect = 2.6e-26
Identity = 91/250 (36.40%), Postives = 138/250 (55.20%), Query Frame = 0


Query: 1   MDLFFFH--KAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEY 60
           MD F F   KAEK +  + R N      +FFR  E+C  LLF+ WT S+LP  ++ISG +
Sbjct: 1   MDSFDFDNVKAEK-AKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAF 60

Query: 61  FGKLFGFIATPLFGFLLCNAIIVALVAKPS-QFSARKSPQTDRLYEDLIEKTGNGDLTDS 120
             ++   I+TPLF FLL N+I+V L+ K S Q +   +     +Y+  +    N      
Sbjct: 61  LRRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTTTAVASAETEIYQAFVRSVENRSKPSD 120

Query: 121 LSEEVEIVYQDKQMIVEGINS---MDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRE- 180
                 IVY DKQ+IV  ++S   +  +  + + +++S+S   H K+  R+ S+   ++ 
Sbjct: 121 EDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSS-PHSKVYGRSKSDVSGKQS 180

Query: 181 ---CVKTQSEKLRRSETEK-SRNLEHSHDI----LYYQDDLSSEEFQRKIEAFIAKEKKF 236
               +      L+RSETEK  +  E+  D      Y +DDLS+EEFQ+ IEAFIAK++ F
Sbjct: 181 SNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRMF 240

[Close]

BLAST of CcUC07G136260 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-09
Identity = 63/237 (26.58%), Postives = 110/237 (46.41%), Query Frame = 0


Query: 5   FFHKAEKDSTPIPRCNLLHIFAKFFRLLELCFLLLFLSWTLSRLPIALRISGEYFGKLFG 64
           F H   + S  I     +  F   FRL EL  L++ +S  LS  P +++ISG+ F +   
Sbjct: 6   FQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILIS-KLS-FP-SVKISGDIFKEAAV 65

Query: 65  FIATPLFGFLLCNAIIVALVAKPSQFSARKSPQ-------TDRLYEDLIEKTGNGDLTDS 124
           F+ +P F F + NAI++ L+AK  ++S+   P        ++ LY++ + K+        
Sbjct: 66  FLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKKKPVVY 125

Query: 125 LSEEVEIVYQDKQMIVEGINSMDREMEVKNTDLESESGLGHPKLLVRTLSEKLNRECVKT 184
            ++  ++        V    S   +       LES +G    K + R +SEK  R C   
Sbjct: 126 ATKTEQLKKPSGGKRVSFGRSQSHKAFEAVKPLESTNG---EKNMKRYVSEKHMRVCDSD 185

Query: 185 QSEKLRRSETEKSRNLEHSHDILYYQDDLSSEEFQRKIEAFIAKEKKFRREESSAIV 235
           +   +R  + E               D +S+E+F+ KIEAFIA++K+ +++E   I+
Sbjct: 186 KKVVVRVKKPE---------------DGMSNEQFRTKIEAFIARQKRIQKDEEHLII 221

The following BLAST results are available for this feature:

BLAST of CcUC07G136260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888396.1	2.1e-102	81.78	uncharacterized protein LOC120078241 [Benincasa hispida]	[more]
XP_008452094.1	7.2e-95	80.97	PREDICTED: uncharacterized protein LOC103493205 [Cucumis melo] >TYK16675.1 putat...	[more]
KAA0044789.1	1.4e-93	80.16	putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 [C...	[more]
XP_011653156.1	2.2e-91	79.27	uncharacterized protein LOC105435182 [Cucumis sativus] >KGN53297.1 hypothetical ...	[more]
XP_022136879.1	4.3e-87	74.07	uncharacterized protein LOC111008461, partial [Momordica charantia]	[more]

BLAST of CcUC07G136260 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G136260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CYU3	3.5e-95	80.97	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A1S3BT40	3.5e-95	80.97	uncharacterized protein LOC103493205 OS=Cucumis melo OX=3656 GN=LOC103493205 PE=...	[more]
A0A5A7TU70	6.6e-94	80.16	Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm6 OS...	[more]
A0A0A0KY10	1.1e-91	79.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G046600 PE=4 SV=1	[more]
A0A6J1C5K3	2.1e-87	74.07	uncharacterized protein LOC111008461 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

BLAST of CcUC07G136260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66440.1	2.6e-26	36.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G34560.1	6.5e-09	26.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33640	TRANSMEMBRANE PROTEIN	coord: 1..237
None	No IPR available	PANTHER	PTHR33640:SF3	TRNA-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT TRM6MTASE SUBUNIT	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G136260.1	CcUC07G136260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity