CcUC07G135960 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G135960
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPMD domain-containing protein
LocationCicolChr07: 19448855 .. 19462360 (-)
RNA-Seq ExpressionCcUC07G135960
SyntenyCcUC07G135960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAGGTATTATATTGAGAAATATAGTGCTATGATTTTGCTTGTTAAACAGGTTTTCTAGATGAATAGGAAAGAAAGAACAAGTTGGTCAGTGAGTATCGTAAAAAGGTTGATGCTTACTGTCCTCACATCCCTTCTCAGGTTGAGAAGGTAACTTGGGAGAGGGTGTGACACAAGTGCAAGTTTTAAATAGGGTTCCTAGAGAGTCCAAGGTCGAATACAAGGATTTGAGAAAAATTAATGTTAAGAATTTGTTGATTTGATGCAGTATTCTATACAAAATAATATATTGAAAAGGGCTTTACAAAAATTAATTATAGGTGAATATACAAGTGTGAAAATGAATTGCTGAACATGGAGAGTGATGATGCATGGATGTAATGGTAGCGAAAATATTAAGTACTAATACCATCAAAACAGCAGGCATTGATAAGTGGAAAAGTCAACAGAGAAAATAAGGTTGAGAAGAGTTCACTAACATTTTCCTAAGTATTGCTTAAGCAGGCGTTCAAATCTTAAACTCTAAAAATTGAGAGTTCACCTCTCGATGCTTCTACGCCACAACTATCTTATCTCTAAGACGCATATAGAGTTTCTTTTAGATAAAAGATTAACTTTATCTTAAAGCTAACTCTTTTCTTGTTTAAATGAAAGTTGTAATCACTCACTCTCTCAAGCAGTTGATCATGCTTAAATCTATTTGTTCAATAGATTCATGCAAGGCTTTTAGCACACACTTAAACAAGATGAATGCTACTGATGCAAAACTGGAAAAATGCTATTTTCATCCACTCAACACATTGAAAAATTAGTTGGCCATAGTAGAAAATGAGATTGATATGTATAAATGGAAATATGGAACAATTTGATTTATATTAAAGAAATTGCGAGTCTTTCAAAATCACTATCTCAATACAAATAAGAAAGTCTTAGAAAATAAAGCAAAGTGGAAAGAATGATGTCAAGCTGCCAATCGCAACGTCTTGCTTTTTGGAGACTTTAGATGGTGGTTGTTTGATGTACTTGTACAGATGGAGGAAGTGGATTCTCACTATTCGAGAGTTAAGACTGTGCTCTCATTCAAAATTCCTCAAAGAAAAGCTCGAGATTGAAGATGGAAATGGAAGTAAGGGAGATTGAGCAAAGCTTTCGCTAGATCGTTTCTCTCTATCTTCAAATTGAGTTCTTGCGGGCTATTTATAGGCATCCAAAAGTTGATTCTCATGATTGCTTGACATCTTTGCATTTAATTCCATACCCTGCTGTGCAAACTTCTTTGCATCAAAAGTTCATTAGCTCTGTTGTGACTTAGTCAAATCAGTCATCCGTGCATGTTGACACGAGAGTCACTGCCCTTGCGTCTATCTATTCTTTTTCTCCTCGATGTTGGGTTTTTCGACGTGATGATCAATGATATGGCTTGGTCCTATACTTTCTGGTAGCATCTTTGCTTTCTTTTAGTAGTTTTTGTTTCTTTTTATTGGATCCTGCGTTAGAAAAGATACAACTCTAATAATTTTTAGGATAAAAGCTTTTGTAAACATTATGAATGTAGAGTTACTCTTTTACACTATTTGCTTCTCAAACCCATGTGCTCTCTTCTAAATAACCCAATTATTCCAAATAAAGAGTACAATAACTTGTATTTCTACAAGTTATCAGGAGTCAAAGTTACTATTAACTTGCACGTCGAGCGAAACTTTTTTGCATCCACACATATTTTCAAAATGTGAGTTCTCTCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTGCTATATATGTATATATATTTCTTTGACTTTTGAAGAGGTGATTGCCATTGTCAGCTTTGCCATTAGCAACCCTATTGAAAAGCGCTTGAAAAGTGCTTTCTATTCTCTCAAATTAAGGAAGTGTATATTAGATTTCACTTGTTTGCTAGTGGTTTTCAGGTCAAAATAAAGAAAATCAGAAGAGAAAGCCAAAAGATCAAAATCGAGCCAGAATACAGTGAAAAAGAAAAAAAAAATTCAAATCTCCCAAAAACAAGGTAGCGCCGCAGCACTTTTTCCCAAGATTAGCATTTGTTTCAATGCGGCCGCGGCGCCGCCTTTCCATATTGATCAGCGTCGTGACACCAACTTTCCTAATTTTAAGATTTTGTATTTTTGGAAAGAATCTCGGGAGACCAACTCTATAAATTGAAGGGTTTCTAACAACCCTAATCACGAATTAACACACCAAAAGAGCCTCAAAGAATGAGTTGGCTGCAAGGAAAAGAGAATAGTTCGAGAGAGAGAGTTTGGTGGTGTTCAAGTTCCCGACGTGAAGACCGAAGGACATCTTGGTGATTCCTCTTCAATCAAGGGCTTCTTTTTAGTAGAGTTTTTCTTTCTTTACACTCTTTCTATGCTTAATTTGTTTATGAACATGTTGTTTGAAGCTATGAGTGGCTAAACTCTTTAGTTTTAGGGTAGTGATGAATTGTTTATGAAGTTATGTGATATTGTGGAATATTCATGGTTTTGTTGTAATGATTATACTTTTCATGGTTATTGTACTTAACTCTCGTTGATTGGCCATCCTTGAATGTTAGGTTAGATGTATGGTTGAGAGATTGTATGTCTAACTAGATCTATAACAATGAATTGTTGTTAATCTATCATGAAAATAGTTAGGGTAACAATGAAAGTTGCTAAAGACTATTCTTAATGCCATTTGTATTGATTTCAAGAGATTAGTAATCAATTGAGTTGCATGAGAAAATGTTGATTTTGAGAGAAAATAGCTTGGAATCAAGTTTCTAGACTTAAGCATATGAATTACAATAAAATCCATGAACCCAAAAATATTGCATGATGGATTAAACAAGGATTCATTACCCTAAAACTCTCTTTGACTCTTGTGTTTCTTATCTATTTACTTTCCTTTTTAGTATTTGCAAATTCACAATTTCAATTCCAATTCTCAAATAAAATTGATTCGATTCTAGAATAGCTAACTTAACCTTCACGATTCAATCCTCAGTGAAACGATATTCGGTCTTCACCGTCTTATATTATAACCTGACCCATATATTTGCAGCTAACACGGAAAGTACGCATCAAGTTTTTGGCGCCGTTGTCGGGGATCCAAATAATGGTTTTTGTTACTTAATATTCATTAGAATTGATAGATCTTAATTTGAAGTGTATATTATTTTTTATTCTATTATTATTATTATTATTTTGGTTGATAATTTTGTCGGTTTATGCCTTGTGATAATACTAACATCCTTCCTCTTGATCCCGATCAAACTAAGGAGATGGCGGAGGAGTTACCAAAGGCAATTTAGGACTATTTTCAACCAACATTACCTGCAAATCAACCCAAAATAATGAATGTGCCCATCAATGTCAACAACTTTGAGTTGAAACTGGGATTGAACCAAATGGCTAGAGAGCTAGCCTTTAGAGGAAGAACCAATGAAGATCCTCACAAGTACTTACGGTCCTTCTTAGAGATATGCAGGACGGTAAAGATGAATGGCGTTTCTAACGATGCTATCAAACTAAGACTTCTTCCTTTCTCTTTACAGGACCGAGCAAACGATTGGTTGGAAACCATACCTCTAGATAGTATCACTATATGAGAGATCTTAGCTCAAGCTTTCTTGAACAAATACTTTCCACCGGCTAAGTCTCAAAGGCTAAGAATGGAGATTGGAGCATTCCGCCAATTTGAGGATGAGCAACTATATGAGGCTTTGGAAAGGTACAAGGATCTCTTGAAAAGATGCCCTCAACATGGTTACCCGGATTTGTTGCAAATTCAACTCTTTTACAATAGATTATTGTTGATTTGTTTTATTGGATTTCTATTTTTGATTCATTTTCATAGCGTGTTGCACAAAAATAGATATTTATCATTTTTCGTACAAAGATGCGTCGAGAATTACTCAAGTATGATCATGATTAAGCAAGTTTTCCTATAAGAAGCCCAAGTATAAGCTCTTATAAGTTTCCTGGTGAGTCCAAGGTCGAACGCAGGGATTTGTAATAACTAGGCGTTGAGAATATATGCATGACTATGTGGTGAACTATACAAGTAATATGTGCAAGATTGTATCTAAAACTATACAAAGAATGAATAAAATTTCCTACGACTAACAATGAGGTGGATGCGGCGATGGTTAGTCAAATGTCCTTAATGTCAGATAGCATGCGTTGAGAATGAATGGAACCATGCGATAAAGGTAGAGTTAACGCAGGAGCTAGTTGTTACTTAAGCCTATCTAAGTATAAATACATACCTACAAACTGTTTTTGTGAATCCATCTCTCGATGTTTCGATGCCATATTAGTCTTATCTCTAAGACGCATGGTAAGTTTGCGTTGGCAAAACATGAACTACATCTCTGCACTTCATCTAGTCTTGATAAATGCTAAAGATTAATCATCTACTCTCTCAAGCTAGACAATCGTGCTTACTACATTTGTTTGTCAGACAAAGTTATGCAAGCTAATGATATGCATTGATCATAATGTAACATACTTCATATTGCTCAAGAAAAACTAACTCTAACATCTAACTCATTTAGCATTCAATCAACATGGTGTAAGATATTTAATATGGAAATAAATGGAAGATAATCGTCAATCAAACTTATATTAAGAAAATAAACCATTCTCTCGAATGTCATTAATAAAACATAAGTGAAAATGATGGAAAAGGAAAATAAATAGAAATGGAAGATGTCAAGCCGCCACTGACAACTTCTTACTTCATGGAGGCTTGAGATGGTCGCTATCTAATACATAAAATCCATAGGGTGAAGGTTCTCACTCACTGGGAGATGATTCTGAAAGTTCTCAGAATCCTTCTCTTAGAAGAGCTCAAAATGGAGGTTGGTCATGGTGGAGTAGTTGTGCAAAGCTTTCGCCTCTTGAACTCGTTCTCTTTCTTTTCTCAGAAGCTTTGGGCTATTTATAGGCGTTGAAAAGTTGAAGTTCATGATGGCCTGACACCTTTGCATTAAATTCCCTGCCCCGCTGCGTAGACTTTTTACATTGTAGGTACATTGGTTCTGTCATGATCTGATAACATGTTATCCTTTTTCATAATGACCTGACAGCTTTTGCCCAGGCGCCGTATTTCCTTTTCTCCTCAACGCATGGTCTCGGCCCATGGTCTCGGACACATAGTTTCGACGCATGGGTTTTCATTTGTTCTCGCAACTTCTTCTCTAGTCCTTGAGTTATTTGCGCTTCTTTTCTTCTTAATCCTACGTTGGGAACAGAAGCACATTGTAAGCACTGACTTGTAAAACCAAGTATTGGGGAGAGCAATGCGATTGAGGTTATGCATTGCTAGTGGAGAAGTAGCCAAAAAGTAGAGCAAAATTTTAGTTAAGTGGTGGCCAAGACCATGTGTTGGTGAAAGTAGCGGGAAGCTGAATTATTTGAGGAACCATGCGTTGTTGATTGAATCAAGAAGGGTTGTGATATGAAGTAGTTGTCGCATCGAAGGATAAGTGATCATTGGTGGGAAAAGAATATGCTTAAACCATGCGTCGAAGACAACCATGCGTCGAAGTTACCATGCGTCGAAGACAGTCATGCGCTGAAGTCACATTGCATCCAAGACAGAACGGTCTTGACGCGATGAAGCTAGTGATGTGAATGACTATGTTGTATGCGTCAGAGGTAGGAGGCGCCGAGAACACCATGCACTGAGAATGGTTATTGCTGAAGACGCTGGAGGAGAACATAGACATGAGTGCCTTGTGTCAAAGGAAAGACCAGCGCCAGCCTACGGGTGAGGGGTAAGTCGGCATTATCATCTCTGTACTTGTGAGGGATAAGTCGGCAGTATATATATAGGTAAGTTTAATTATTTTCAGACATTTCGAGAACTTAAGTCGGTTCCATCTTTCAGAGAAACCACCAGAGAAGGAAGAGGAAGGTGTTCTTATAGTTTTTGGGTGAAATTCTACCCGTTTTGGTGCTGAAATCCGAACTGGAACAGGAGACTGATTGGCACACAGACTGAATAGTGGTTGATGTTTGGAGTAGAACGACTCAAGGAAGCCGAGTTTGGGGCTGAAATTTTGAGGTTAGTAAGTTAACATAATTCCTAACAAGTCTTATGAAGGATGGTTGAGCTGAAACCGAAGTTTATCACATGAATCGTTAGGTAAAAGCAGCAACTACAGAACTGCTATGTAATCCGGAGCAACGCGGAGTGATTTTGGCATAACTAGAGAACGAAAAAGAGTTAAGTCTTGAAATTTTGAGGTAAGCTGTGGGACTTAATTCTTTACAAGTTTGTAGAAGGGAAGAAGTCTTAATATGGGCTGGAAATGCGTTTTTAGCAGGGATTAAGCAGAGAGATCAAGACTGTAGCTGTCAGCTTTGTTAAAAAGTAGTTAAAGCTCAACGTGGATATAACAGCAGGAGTAACTGCACACAAGTATCCTCGGGAATCAGGGTATAATAGAAGGGTAAGGAACAATTAGTAGTTAAAGCTTTAGTGTTAAAGTTTGAGAATAAACCTATGAGACCCTAACCGCGTGACGAATTACAAACATTGTGCATGTAATGAGTTACTGTTTATGTTTTGATGAATGAAAAAGAAGTATAACAAGGGAAAATATCTATTTCAGGCCAAGAGGAGATAGGAAAGGCGTATAATCCACTCAAGGCCTAGGAATAATTGTGAGTGACACTTCTTTTACTTTAAAACGATTTTGTTGAACATGATAGTTCGGTTTTCCAACGAAATGTGAATTTGTGATTAAATGATTTATGAAGCATATTTATGTTCTTAAAGCTATTGAAAAACATGTTCATGAAATGTTATTGATATAATAATTGCCCTGTATTCTTATGAACGATTTGTATACGAACGGGTTGTATAAAATGTTGCTTCCAAAAAGGAAAATGTTTTAGAGGAGGCTCAATGCTAGTAAGGCATGTGAGTTTCCCCGGGACCCAGTACTTAGGCAACCCGCCTATAAAATGTTTTACAGGAGGCTCAATACTAATAAGGCATGTGAGTTTCCCCGGGACCCAGTACTCAAGGACATGAGAAGGTACTTGGGCAACCCGCCATATTCCTATGTGCACATAGAGGTTATATGCTGGTGCGTTGAGTCTTGCTCCGCATCGAGCCTTATATGTTTTCGACGTTGGGGTGTTGAGTTTTGCTCCACTTCAACTAAGGGAAAAATATTGTATCTAAACTGTTTCCTTATGATTTGTTTAAAAATCATGTATGAATTGATAAGGGCAATTAAGTTTGTTTTAACTAATGTATTTAAAGTGATTGCATGTTTTATGTTAATGTTGAACTCAGTTTTACTACTGATGATTTCCGAACTAAAATGGTTTGTTAACATTGTCACTCACTGGGCCTTTAGCTCATGTTTTCAATGTTTTCTTTCCCCTCCAGGTAGCAAGGACGTTTCTGGTGCTTTGCCTACTCCCACTCGCCCTGCTTAAGCTTCGAGTCTCCAGAAAATCTGACTTGTTGAAGTGTTATTTGTATGTTAAACCTTAATTAGGTGGCATGTATATATGTATGTACAATTACCAGGGGTTGAACTATGGGTTGTGTAAGGACTTGTAAAAGAGTTGAGAAATTTCATTTTTGGCTTATATATACTTTTCTATATGTGATGTTTAAAATATCTTAGAATGTGGAGATTACATTGTGAATAGTGTAGAAGTGTGAAGGAATAGATGGTATGCGTCACAAGAGGGGTGATGTATACTGTCCTCACGTCTCCTTTCAGGTTATGCAGGTAAACTTGGAAGGGGGTGTGACACTCATAATTTTTCAGGTATTTTGTTTTGTAAATAATGTCAACGCATGGTGATACATTTTACATGATTCAACTACCAAAATCATGTGTTTAGCTCTAAAGTTACTCTAATTAATTCAAATAGTGACTATAATAACTTGTATTTCTACAAGTTATCAATTATCAAGTTCAACCAAATCCATCCTAGATGTAACTGCCGGAAGCTCAATTTTCTCAAAAAATGCTCAAGAGGCTTATACCATACTAGAAAACTTGGCCACTACATCATATAATTGACCATGTGAACGGTCTTCTCCAATCATTTCAAAAGCCACCAGACGATATGAGATGGACAAGGTAAGTTCTCTAAAAGCTCAATTGGCTTCTCTCATTAATGCTTTATCTAAATTTTCTCAAGGAAGCCAAGCCCAAGCAAGTCCACCATCTATAGCTTCCCTTGCGACCATGGCAAATCAACAAGAGTCAAGTGAGTTAGAGGTGGCCAATTATGTTGATAGAGAACAATACTGAGGTCAACAACCACTCCCAACTCATTATCATCCCAACTTGAGGAATCACGAGAATTTCTCATATGCTAACAACAAGAATGTGTTGCAAGCACCTCACGGATTCAATGGAGGGGGGAATGCAAAGATATCATCATTGGATGACATAATGCTTGACTTTGTCAAAGAGTCAAGATCAAGAACAACCACATTGGAGAATTTGGTTCAAGCTATTGCAAGCACCAGTCAAAGCCAAGGTAAGACAATTCAAAGTTTGGAGGTTCAACTTAGTCAATGGCCACATCTCTCCACACAATGCAAAAGGGTAAATTTCCAAGTTGTATGGAGAAGAACCCCAAGGAGGAATGCAATGCCATAACCAGGAGTGGCAAGGAGTTGAAAAAGCACATCATGATAGATGATGATGAGCTCCCACAACAAGAGGATGAAGCCATCATAGAAGATGCTCCAATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGCATCTAAGGAAAAGGAGGAATCAAAGTCAAACATAGGGAGTACTTCTAACTCTACTACTTTTATCCCCAACACTTTATTTTTTCCTCAAAGATTTCAAAAGAAAAAGATTGATGTTCAATTTTCCAAAATTCTTACACATATTCAAAAAGTTAGAAATTAACCTTCCTTTTGCAGAGGCATTAGAACAAATGCCTAAGTATGCCAAGTTCATGAAAGATGTGTTGTCTAAGAAGAAGAGGTATGAAGATTACAAAACGGTTGCACTAACCGAAGAATGTAGAGCGACAATACAAAGAAAATTGCCTCCAAAATTAAAAGATCCAGGGAGCTTCTCTATCCCTTGTCATTTAGGCAATAATTCGGTTACTAAAGCGCTTTGTGATCTTGGAGCTTCTATTAACTTAATGTCTTTATCCATGTTTAGGAAGCTCAATGGGGGAGAGGTGCAACCAACTACCATATCCTTGCTTTTGTTCGGTCGATCATTTGTTCGTCTCTACGACATTGTGGAGGACGTATTGGTCAAGGTGGGCAAGTTTATTTTCCCAGTGGACTTTGTAATACTAGACATGGAGGAAGATGCTGAAGTCCCATAACTATTGGGAGACCTTTCTTGGCTACTGGAAGGGCCCTCATCGTTGTGCAAGATGGAAAGTTCACATTCCGCCTTAACGATGATGATGTAACATTTGACATCTATAAAGTCCTTAAATATTCGGATGTAAAAAGGTATGAGCATCATGAACCAAGCACAAAGATAATATCGCCCCCCTCTTCTAATAAGAACTCTATGCATGATGATCCTTCTTTGAATGGTAAGACTAATGGCATGCTTGATGTTAAATTAGAAAACCCTATGAAACATGTTTATAGTTGTGATAATGCTCCCAGTTCTTCTTGCATGCCTCCAAAACCTAAAATGAATTATGAACAAATCATGAAGAAGCATGTTAAAAATGAAGTAGTGAGTCCAATAAAATGTCATAATGATGACTCCTTAACGATACTTGACTACATTAGAAAAGATGATGTCCAACTTGACATTGAATTGTTGACCAACCACTAAATGTTAATGAATATGTTTGTGAGAGTCAATGTGGGCGAAAACTAAAAGTTTTAGGCGATCCAACGCATGGAAGGAAGAAATCACCTTGTGATTCATCGTGACGTGTAAGCCCTCCCCGTCTAGCTAGACGACGTTAAACCAAGCGCTTGTTGGGAGGCAACCCAATTTTATTGCTTTCTTTATTTTTTCTCTTTTGTTAAATCTTTGAATCACTCATATGCTTTATTAATTTTCAGGATCTTAGTTTATCACAAAAGTACTCCTTACACCAAGCCTGTTTGGTGGCTTCCCGCTTGCTCCTAGGCTTGTTCTTTCCTTGTTAGATGCTCTTATGCATTAGAAACAATGCATGATTCTAAGTTGGGGGTGGGAGGTGTCATTCGTACTTTTGTGTGTTTTCTTTATCCTGCTATGCATGTTTGTGAGGATTTAATGATCATATGCATATTAATGAAATTTTGAAAATTTTTTGAAAATTTTTGAGCTTTCAAAGTTAATGGAAGTATTTTTATGGTTGTGTGCTTTGATGTTGATTGCCCATGATGAGATTTGAATTCGAATGATAGATCACTTATTGTGGAAATAGAATAGCATCATCTTGAGTTAATTCATTTAAGTCCCTCTTAACATCTCCCATATTCTTGAACACGTAGCCACTTTAATTTAGAAGCTTTAACTAAAAAAAGGATTAAGTTGGGTGTATTTGGTTGTCACTCCGAAAGGCCCCACCAGTTAAGAGTAGAAATGCATGATGGTTTGTAATCTTAGACTAAAGAAAAAGAAAAGAGTATACATGCCTTTGAGAAAAGAAAAAAAGTGTACACAAAAATATATGAGCTTTACATGTCTATCTTTTAAGTATTAAGCTTGTAATGAGTATGCATGGATAGGGGTAAAAAGAACTGCCTTTGCTGTGATCAGTAAAGACACTTGGGAATTGACTAGGTACGAGTCCCTATAGTGAATGTGTGAAAGCTAGTGCCTTAGGTAAAAGAATGCAAGTTTAGGGCCCATGAAAAAAAAAATGATTGAATGGCACCTTAGTGGACATATTACTCACTTGAAATGTGTGGATGCTTGAAGATTGGTGCATGAGCTAGAGTAAGGGAAAAACTAAGGAAACTCTCTTTAAGTCCCAATTTGTTTTTTAGTATTTTAGATTGAATGAGGCTTGCACACACACACACATGAGAGATAGCAAGATTTTGCCTTGAATGATTATAACAATATAGATATTCTTGCATGTTTCTACTTAAGCTCTAAATGCTATTCTCTAATACATGAGTCGATTTGCACACTTCTTCATCTAAACTCCCTCTATTTGATTCTCTTCTTCGCTCGGGACTAGCAAATCTCTAAGTTTGAGGTGGTGAAAAGCGCTCAGAAAGTGCTTTCTATTCTCTCAAATTAAGGGAGTTCATATTAGATTTTACTTGTTTGTTAGTGGTTTTCAAGTCAAAATAAAGAAAATCAGAAGAGAAAGTCAAAAGATCAAAACTAAGCCAGAATACAGTGAAAAAGAAGAGAAAAATCCAAATCTGCCAAAAACAAGGCAGCGCTACGACGCTTTTTCCTGAGAGTAGTAGTTGTTTTAGCATCGCGGCGCCGCCTTTCCATATCAGTTAGCACCACGACACCAGCTTTCCTAATTTAAAGATTTTGAACTTTTAGAAAGAATTTTGGGCGGCCAACTCTATAAATTGAAGGGTTTCCAGCAGCCCTAATCACAAATTAACAGACCAAAAGAGCCTAAAAGAGTGAGTTGACTGCAAGGAAAAGAGAAGAGTTCGAGAGAGAGAGAGTTTGGTGTCATTCGAGTTCCCAAAGTGAAGACTGAAGGATATCTAGGTAGTTCCTCCTCAATCAAGGGCTTCTTCCTAGTAGAATTTTTCTTTTTTTATACTCTTCCTATGCTTAATTTGTTTATGAACATGTTGCTTGAAGCTATGAGTGTCTAAACTCTTTAGTTTTAGAGTATTGATGAATTGTTTATGAAGTTATGTTGATATTGTAGAATATTCATGGTTTTGTTGTAATGATTATGCTTTTCATTGTTATTGTGCTTAACTCTTGTTGATTGGCCATCCTTGAATGTTAGATTAGATGTATGGTTGAGAGATTGTATGTCTAACTAGATCTATAACAATGAATTGTTGTTAATCTATCATGAAAATAGTTAGGTTAACAATGAAAGTTGCTAAAGACTATTCTTTATGTCATGTAATTTGTATTGATTTCAATAGATTAATAATCAATTGAGTCGCATGAGAAAAAATTGTTTTTTAGATAAAATAACTTGAAATTAAGTTTCTAGACTTAAGCATATGAATTACAATAAAATCCATGAACCCTAGAATATTGCATGATGAATTAAACAAGGATTCATTACCCTATAACTCTCTTTGACTCTTGTGTTTCTTATCTATTTACTTTCCTTTTTAGTATTTGCAAATTCACTACTTCAATTCCAATCCTCAAATAAAATTGATTCGATTCTAGAATAGCTAAGTAACTTAACCTTCACAATTGGATCCTCATTGAAACGATATTCGGACTTTACCGTTTTATATTATAACTTGCGAAAAACACAGAAAGTGAGCATCACCTACTCCTGCTAGATATCTTCCTTTGTGGTTGTGTAACTTGCAGGAACCATCAGGCACTCCAGCTTTGTGGTTGTGTATCCTGTAGGAACGATTGAGCGCTCCAACTTTGTCACTATCAGCTTTGCCCTCAGTGACCCAACTCCTACTAAGTACCGTCCTTTGTGGTTGTGTAACTTGTAGGAATGGTCGGGCGTTCCAGCATTGCCATCATCAGCTTTGCTAGTAGTGACCCCACTCTTGCTAGGTACCTTCCTTTGTGGTTGTGTATCCTATAGGAACGGTCGGGCGCTTCAACTGCCTGGGTTGTCGCATTTATTTTATGTCCTTATTTATTTTAGTAATTTTATATTTTTCATCATCATTTTTTTTAACTTGACAACCGCCCCCCCCCCCCCTTTTTTTTGGAAGAACACCCTTATTTCTACCATGGTGTACTTCACAGAACATCTTGATTCGACGAAAAAGTGTTTAATCATCCTGAACGATGAAGACCAACCTCTAGATAGTGACATCATTCTTCTTGTGAGGGAGGCGGTATATGAAGATATTAGAGAATCCCCACCTCCCCTAGACAATGTTATCTTCTTATCTAGATGGTTTGAAGAGCAACCCATGAGGCCTAATTCATCGTTGATGGCCTGGTTTCTCGAATCCATTACAAAACCCAAATGA

mRNA sequence

ATGGCACAGGAACGATTGAGCGCTCCAACTTTGTCACTATCAGCTTTGCCCTCAGTGACCCAACTCCTACTAAGTACCGTCCTTTGTGGTTGTGAATGGTCGGGCGTTCCAGCATTGCCATCATCAGCTTTGCTAGTAGTGACCCCACTCTTGCTAGAACATCTTGATTCGACGAAAAAGTGTTTAATCATCCTGAACGATGAAGACCAACCTCTAGATAGTGACATCATTCTTCTTGTGAGGGAGGCGGTATATGAAGATATTAGAGAATCCCCACCTCCCCTAGACAATGTTATCTTCTTATCTAGATGGTTTGAAGAGCAACCCATGAGGCCTAATTCATCGTTGATGGCCTGGTTTCTCGAATCCATTACAAAACCCAAATGA

Coding sequence (CDS)

ATGGCACAGGAACGATTGAGCGCTCCAACTTTGTCACTATCAGCTTTGCCCTCAGTGACCCAACTCCTACTAAGTACCGTCCTTTGTGGTTGTGAATGGTCGGGCGTTCCAGCATTGCCATCATCAGCTTTGCTAGTAGTGACCCCACTCTTGCTAGAACATCTTGATTCGACGAAAAAGTGTTTAATCATCCTGAACGATGAAGACCAACCTCTAGATAGTGACATCATTCTTCTTGTGAGGGAGGCGGTATATGAAGATATTAGAGAATCCCCACCTCCCCTAGACAATGTTATCTTCTTATCTAGATGGTTTGAAGAGCAACCCATGAGGCCTAATTCATCGTTGATGGCCTGGTTTCTCGAATCCATTACAAAACCCAAATGA

Protein sequence

MAQERLSAPTLSLSALPSVTQLLLSTVLCGCEWSGVPALPSSALLVVTPLLLEHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRPNSSLMAWFLESITKPK
Homology
[Close]
BLAST of CcUC07G135960 vs. NCBI nr
Match: XP_031745312.1 (uncharacterized protein LOC116405439 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-13
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL D DQ L+  IIL VRE  YE+I +S  P DN IFL +W +E+ + P
Sbjct: 6   EYSDSTKRCLIILKDVDQSLEEGIILPVREGTYENIMDSQIPEDNFIFLPKWSKERFVNP 65

Query: 113 NSSLMAWFLES 124
           NSSL +WFLES
Sbjct: 66  NSSLKSWFLES 76

[Close]
BLAST of CcUC07G135960 vs. NCBI nr
Match: KAA0033822.1 (uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 7.6e-11
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I L +W +E+ + P
Sbjct: 6   EYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKEKSVNP 65

Query: 113 NSSLMAWFLES 124
           NS L +WFLES
Sbjct: 66  NSPLTSWFLES 76

[Close]
BLAST of CcUC07G135960 vs. NCBI nr
Match: TYK21863.1 (uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 7.6e-11
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I L +W +E+ + P
Sbjct: 6   EYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKEKSVNP 65

Query: 113 NSSLMAWFLES 124
           NS L +WFLES
Sbjct: 66  NSPLTSWFLES 76

[Close]
BLAST of CcUC07G135960 vs. NCBI nr
Match: KAA0033523.1 (hypothetical protein E6C27_scaffold261G00660 [Cucumis melo var. makuwa])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0 

Query: 40  PSSALLVVTPLLLEHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVI 99
           P   LL       E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I
Sbjct: 102 PPGILLFAMVYFTEYSDSTKRCLIILKDENQSLDSAIVLPVREGAFENIIDSQILKENFI 161

Query: 100 FLSRWFEEQPMRPNSSLMAWFLES 124
            L +W +E+ +  NS L +WFLES
Sbjct: 162 LLPKWSKEKSVNSNSPLTSWFLES 185

[Close]
BLAST of CcUC07G135960 vs. NCBI nr
Match: TYJ95665.1 (hypothetical protein E5676_scaffold104G00970 [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 6.4e-10
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I L +W +E+ +  
Sbjct: 6   EYSDSTKRCLIILKDENQSLDSAIVLPVREGAFENIIDSQILKENFILLPKWSKEKSVNS 65

Query: 113 NSSLMAWFLES 124
           NS L +WFLES
Sbjct: 66  NSPLTSWFLES 76

[Close]
BLAST of CcUC07G135960 vs. ExPASy TrEMBL
Match: A0A5A7SRI5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1735G00180 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I L +W +E+ + P
Sbjct: 6   EYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKEKSVNP 65

Query: 113 NSSLMAWFLES 124
           NS L +WFLES
Sbjct: 66  NSPLTSWFLES 76

[Close]
BLAST of CcUC07G135960 vs. ExPASy TrEMBL
Match: A0A5D3DEA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G00160 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.7e-11
Identity = 38/71 (53.52%), Postives = 51/71 (71.83%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I L +W +E+ + P
Sbjct: 6   EYSDSTKRCLIILKDENQSLDSGIVLPVREEAFENIIDSQILKENFILLPKWSKEKSVNP 65

Query: 113 NSSLMAWFLES 124
           NS L +WFLES
Sbjct: 66  NSPLTSWFLES 76

[Close]
BLAST of CcUC07G135960 vs. ExPASy TrEMBL
Match: A0A5A7SST7 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold261G00660 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = 0 

Query: 40  PSSALLVVTPLLLEHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVI 99
           P   LL       E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I
Sbjct: 102 PPGILLFAMVYFTEYSDSTKRCLIILKDENQSLDSAIVLPVREGAFENIIDSQILKENFI 161

Query: 100 FLSRWFEEQPMRPNSSLMAWFLES 124
            L +W +E+ +  NS L +WFLES
Sbjct: 162 LLPKWSKEKSVNSNSPLTSWFLES 185

[Close]
BLAST of CcUC07G135960 vs. ExPASy TrEMBL
Match: A0A5D3BB02 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00970 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 3.1e-10
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL DE+Q LDS I+L VRE  +E+I +S    +N I L +W +E+ +  
Sbjct: 6   EYSDSTKRCLIILKDENQSLDSAIVLPVREGAFENIIDSQILKENFILLPKWSKEKSVNS 65

Query: 113 NSSLMAWFLES 124
           NS L +WFLES
Sbjct: 66  NSPLTSWFLES 76

[Close]
BLAST of CcUC07G135960 vs. ExPASy TrEMBL
Match: A0A5A7U4C3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00240 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.1e-10
Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 53  EHLDSTKKCLIILNDEDQPLDSDIILLVREAVYEDIRESPPPLDNVIFLSRWFEEQPMRP 112
           E+ DSTK+CLIIL D +Q LDS I+L VR+  +E+I +S    +N I L +W +E+ + P
Sbjct: 6   EYSDSTKRCLIILKDGNQSLDSGIVLPVRKGAFENIIDSQVLKENFILLPKWSKEKSVNP 65

Query: 113 NSSLMAWFLES 124
           NS L +WFLES
Sbjct: 66  NSPLTSWFLES 76

The following BLAST results are available for this feature:
BLAST of CcUC07G135960 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031745312.14.8e-1359.15uncharacterized protein LOC116405439 [Cucumis sativus][more]
KAA0033822.17.6e-1153.52uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa][more]
TYK21863.17.6e-1153.52uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa][more]
KAA0033523.12.2e-1047.62hypothetical protein E6C27_scaffold261G00660 [Cucumis melo var. makuwa][more]
TYJ95665.16.4e-1052.11hypothetical protein E5676_scaffold104G00970 [Cucumis melo var. makuwa][more]
BLAST of CcUC07G135960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC07G135960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SRI53.7e-1153.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DEA33.7e-1153.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7SST71.1e-1047.62PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5D3BB023.1e-1052.11PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A5A7U4C34.1e-1050.70Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CcUC07G135960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..31
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G135960.1CcUC07G135960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane