CcUC07G135890 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCCCTTTATTCCCCTCCCCCTCTTTTTATACCCCATTTTCTTCCAACCCTTTTCCTTCAACTCATCGTCTATTCTCATTCAACTCCTTCCCTATTCCTCTTTCACTTACACTCTAATGGCACGTTCATACGAGAAGCCTGCCCATTCCTCCATCGATGATAATGACAAGCATCGAGAATTCGACCGTGACGTTCGAGAAATGGTTTCCACCCTCACCAGTCGCTTGGGATTGATTCGGAAAGGAGGTACTGTAGCTTAATTAGTAGTAGTTCTTTTAATTTTCATTTGCATGCATGATTTTTATCAGAAAGGCCGGTGGGAATTTAAATATATAATGTCATATATTATAAGTTGTCAATAGAGAATTGTTGACATACTTGAGCTAGCAATGTGAAATGAGGATAGATGAGTTATGTTTGGATTGACAATTCCATCTCTCGATTGAGGATTCTTAAAGTTTAGACTCTTGATACGTGTTGGTTGGTGTCAATATATAGGTTCCGCTCAGCACCATGAAGTTGTCGACGACCAAGGCTCAAGTGTCATCACACTCGCGGGAACCAACACAGGAGCCACCATGCGTGCAGAGTTGAACGGGAAAACGACGAAGCTCGAGGACACGGGGGCAGATGAGAACGAGTCCCTGACCTCGTACATTAACAGCAACTTTCAAGCCATCAACAACTCCATCATGTTTGGCGGTAGCTACACAGGAAATGACCCTGGAGTTCACATGGAGATTTCTGATCTACATGAAGAAAGTCATAAGGCTGAGAAAGGAGGGGCTAAGGGCAAGAAAGTTGGGAAGGATAATGCTGAGTCCGGAGGCTCATGGTTTTCAAAGGAATGATTTTCTTTTTAGGTGCATTAAGAAGTAATCATAATACATATATACATGTCAACGTTTTATATCCATATAAATTATCCTATATAAGTACTAAAGGTTGAAGAGGTTTCTTCTACAGTGAGTTTTTCCAATTCTTAATGCTTAATAAACGGATTTATTGTGGT CATCCCTTTATTCCCCTCCCCCTCTTTTTATACCCCATTTTCTTCCAACCCTTTTCCTTCAACTCATCGTCTATTCTCATTCAACTCCTTCCCTATTCCTCTTTCACTTACACTCTAATGGCACGTTCATACGAGAAGCCTGCCCATTCCTCCATCGATGATAATGACAAGCATCGAGAATTCGACCGTGACGTTCGAGAAATGGTTTCCACCCTCACCAGTCGCTTGGGATTGATTCGGAAAGGAGGTTCCGCTCAGCACCATGAAGTTGTCGACGACCAAGGCTCAAGTGTCATCACACTCGCGGGAACCAACACAGGAGCCACCATGCGTGCAGAGTTGAACGGGAAAACGACGAAGCTCGAGGACACGGGGGCAGATGAGAACGAGTCCCTGACCTCGTACATTAACAGCAACTTTCAAGCCATCAACAACTCCATCATGTTTGGCGGTAGCTACACAGGAAATGACCCTGGAGTTCACATGGAGATTTCTGATCTACATGAAGAAAGTCATAAGGCTGAGAAAGGAGGGGCTAAGGGCAAGAAAGTTGGGAAGGATAATGCTGAGTCCGGAGGCTCATGGTTTTCAAAGGAATGATTTTCTTTTTAGGTGCATTAAGAAGTAATCATAATACATATATACATGTCAACGTTTTATATCCATATAAATTATCCTATATAAGTACTAAAGGTTGAAGAGGTTTCTTCTACAGTGAGTTTTTCCAATTCTTAATGCTTAATAAACGGATTTATTGTGGT CATCCCTTTATTCCCCTCCCCCTCTTTTTATACCCCATTTTCTTCCAACCCTTTTCCTTCAACTCATCGTCTATTCTCATTCAACTCCTTCCCTATTCCTCTTTCACTTACACTCTAATGGCACGTTCATACGAGAAGCCTGCCCATTCCTCCATCGATGATAATGACAAGCATCGAGAATTCGACCGTGACGTTCGAGAAATGGTTTCCACCCTCACCAGTCGCTTGGGATTGATTCGGAAAGGAGGTTCCGCTCAGCACCATGAAGTTGTCGACGACCAAGGCTCAAGTGTCATCACACTCGCGGGAACCAACACAGGAGCCACCATGCGTGCAGAGTTGAACGGGAAAACGACGAAGCTCGAGGACACGGGGGCAGATGAGAACGAGTCCCTGACCTCGTACATTAACAGCAACTTTCAAGCCATCAACAACTCCATCATGTTTGGCGGTAGCTACACAGGAAATGACCCTGGAGTTCACATGGAGATTTCTGATCTACATGAAGAAAGTCATAAGGCTGAGAAAGGAGGGGCTAAGGGCAAGAAAGTTGGGAAGGATAATGCTGAGTCCGGAGGCTCATGGTTTTCAAAGGAATGA HPFIPLPLFLYPIFFQPFSFNSSSILIQLLPYSSFTYTLMARSYEKPAHSSIDDNDKHREFDRDVREMVSTLTSRLGLIRKGGSAQHHEVVDDQGSSVITLAGTNTGATMRAELNGKTTKLEDTGADENESLTSYINSNFQAINNSIMFGGSYTGNDPGVHMEISDLHEESHKAEKGGAKGKKVGKDNAESGGSWFSKE Homology
BLAST of CcUC07G135890 vs. NCBI nr
Match: XP_038901871.1 (uncharacterized protein LOC120088550 [Benincasa hispida]) HSP 1 Score: 291.2 bits (744), Expect = 6.8e-75 Identity = 146/160 (91.25%), Postives = 154/160 (96.25%), Query Frame = 0
BLAST of CcUC07G135890 vs. NCBI nr
Match: XP_004146521.1 (uncharacterized protein LOC101210126 [Cucumis sativus] >KGN53335.1 hypothetical protein Csa_014931 [Cucumis sativus]) HSP 1 Score: 288.9 bits (738), Expect = 3.4e-74 Identity = 149/162 (91.98%), Postives = 156/162 (96.30%), Query Frame = 0
BLAST of CcUC07G135890 vs. NCBI nr
Match: XP_023523114.1 (uncharacterized protein LOC111787298 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 285.0 bits (728), Expect = 4.9e-73 Identity = 144/160 (90.00%), Postives = 151/160 (94.38%), Query Frame = 0
BLAST of CcUC07G135890 vs. NCBI nr
Match: XP_008452037.1 (PREDICTED: uncharacterized protein LOC103493165 [Cucumis melo] >KAA0044827.1 uncharacterized protein E6C27_scaffold74G001190 [Cucumis melo var. makuwa] >TYK16637.1 uncharacterized protein E5676_scaffold21G004650 [Cucumis melo var. makuwa]) HSP 1 Score: 278.5 bits (711), Expect = 4.6e-71 Identity = 148/164 (90.24%), Postives = 157/164 (95.73%), Query Frame = 0
BLAST of CcUC07G135890 vs. NCBI nr
Match: KAG6577194.1 (hypothetical protein SDJN03_24768, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015193.1 hypothetical protein SDJN02_22826 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 267.3 bits (682), Expect = 1.0e-67 Identity = 135/160 (84.38%), Postives = 142/160 (88.75%), Query Frame = 0
BLAST of CcUC07G135890 vs. ExPASy TrEMBL
Match: A0A0A0KUN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G047960 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.6e-74 Identity = 149/162 (91.98%), Postives = 156/162 (96.30%), Query Frame = 0
BLAST of CcUC07G135890 vs. ExPASy TrEMBL
Match: A0A5A7TSH6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004650 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.2e-71 Identity = 148/164 (90.24%), Postives = 157/164 (95.73%), Query Frame = 0
BLAST of CcUC07G135890 vs. ExPASy TrEMBL
Match: A0A1S3BSV6 (uncharacterized protein LOC103493165 OS=Cucumis melo OX=3656 GN=LOC103493165 PE=4 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 2.2e-71 Identity = 148/164 (90.24%), Postives = 157/164 (95.73%), Query Frame = 0
BLAST of CcUC07G135890 vs. ExPASy TrEMBL
Match: A0A6J1EYW1 (uncharacterized protein LOC111437667 OS=Cucurbita moschata OX=3662 GN=LOC111437667 PE=4 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 4.3e-67 Identity = 134/160 (83.75%), Postives = 141/160 (88.12%), Query Frame = 0
BLAST of CcUC07G135890 vs. ExPASy TrEMBL
Match: A0A6J1J517 (uncharacterized protein LOC111481813 OS=Cucurbita maxima OX=3661 GN=LOC111481813 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 4.8e-66 Identity = 132/152 (86.84%), Postives = 141/152 (92.76%), Query Frame = 0
BLAST of CcUC07G135890 vs. TAIR 10
Match: AT1G63310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 93.2 bits (230), Expect = 2.5e-19 Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 0
BLAST of CcUC07G135890 vs. TAIR 10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH ) HSP 1 Score: 53.1 bits (126), Expect = 2.9e-07 Identity = 45/130 (34.62%), Postives = 57/130 (43.85%), Query Frame = 0
BLAST of CcUC07G135890 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.6e-05 Identity = 29/87 (33.33%), Postives = 47/87 (54.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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