CcUC07G135750 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G135750
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	nuclear transcription factor Y subunit C-1-like
Location	CicolChr07: 18713782 .. 18715839 (+)
RNA-Seq Expression	CcUC07G135750
Synteny	CcUC07G135750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAAGCAAATTTCCACAGTTTACTCAAATTATTTGTTGAAATCATAAGGTTACGAGACTTCAAAAGCTCGACTATTGTTAAATGAATGTATATTCCAACCCTAAAAGGTATGTTTTGTCTTTTAAGCAATAATTAATATATATATATATATATATATATATTCAAATCAACAATGATGTGTTCTAGTTTGTTTGTTTTGCTGTTTTGCTTATGTTGTCCTAAAAAAATAATTAGTAATAATTGATGTATTAAGATCTATAATCAACCTATAAGCATGGTCTAAACCCAAGTCAAACTAGATTAAAATCAGAAATAAGTGACATGAATATAAGTTCAAATAAAGGCATATATTAGATACATACATTACAGACATAAAACACATAATAAATATTACCCCATAAAATGATTAATGTTTTATTGCATCAAAATTCAAATGTTAGACTATAAATTTAATTGTTTGGGGGATTGTAATGTAATGAGTTTGGATTGTTTTGTTGTTTTCATGTTTCACGATTCCATCTCTGTTCCGCCTTCAATACCTCATGCATTCCAACACTCCTCTTATTTCCAATAATCTTAATTACATTCCAACCTCCCAAACAACCTTTTAGGTTCTAAGGCTCCGTTTGAAAATCATTTGGCTTTTGAAAATTAATTCTATTTCTTCCTAGATTCTTATAATGATTTTCATCTTTCTTGATTAAAAGAGTTGAATTCTTAGTCAAATTCTAAAAACAAAAACAAGTTCTTAAAAAACTACTTTTTCAAGTTTTTTAGATTTGACTTGGTTTTTTAAAACATTGGTAAAAAGTAGATAACAAAACAAAAAAACTTAAAGATGGAAGTAGTATTTATAAACTTAATTTTCAAAAACCAAATAGTTCCAAAACGAAGCCTAAACTTTCGATTTTCTTAAAATTCACATATTTGTAAAAGGGTGTTTAAGACAAGGGTAAAATTGTTAAATTTGAGCAAGTGTTAAGTCTATAGAAATTGCTTTGTCGTACAGCTCATAAGGTTTGAGAGTCTATAATGAAATAATTATAAGGTTTGAAGTGATGTTTTCTAGTTATGAGACCCACAAACACTTTGGTAAAACACTCTAAAACTTTAGAGTTTGATTAGACAAATTTAAATTTACATTAATAGATGAATTGATTTTAAAATTTTTAAAAATATGTCAAGAAAATATTATATTGAAATTGAAGCTTCATGCTTTCAATATATATTAGAAATTTTTGGAAGTTGGAGTAAGTAAATACAAGGCTCACAGTTCACTAAATTTAAAATTTAAACAAAAATTCAAACAGTAAGGTTGAAATTTGAATGATTAACTTAATATATGAGAGTGACATCACCCAAAAGGTATAATTTGTGTGATTGTGTCAAGCAACAAAAACAAATATTTAAATTGAAAGCAACCAATAACGACGGCTAATATGTGTTTAAACGTTAAAATTATAAGGTTGGTGTTAATTAATTATCATAAACCTTCCCTTAAATATGGAAGAAAACGAAAAAAAAAAAAAAAAAAAAGAAAAAAAGTGTTAATTGGACGGAGTAACCTTAATCGGAGCAGGCTGGCCGGCTGCAGCAGCATTCCACAACTCCTATAAATTCACATCTCCTCCTCAGTTCAAATTGGAATCGAAGAAGTATCTCTGTTTCCGGTCAAAAGCAGAGCAGGGAGGAATATTCCGATGAGGCAAGCGGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCATTCCCTGCCCTTGGCGAGGATAAAGAAGATCATGAAGAAATCCGGTGAGGAGGTGAAGATGATCTCCGGCGAGGCTCCGATCGTCTTCTCGAAGGCGTGTGAACTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATCGCGATGCAGAGCAAGAAGAGGATGCTTCACAAAGAGGATGTGGCTTCCGCCATTTTGGCCACTGATGTTTTCGATTTTCTCATCGGATTGATCTTCAATGAAACAGCCGCCGCTGCCGGCGACCTTGTTGAAACTGAAACTATGTCCATTCCTTGCTGA

mRNA sequence

ATGATTCAAATTGGAATCGAAGAAGTATCTCTGTTTCCGGTCAAAAGCAGAGCAGGGAGGAATATTCCGATGAGGCAAGCGGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCATTCCCTGCCCTTGGCGAGGATAAAGAAGATCATGAAGAAATCCGGTGAGGAGGTGAAGATGATCTCCGGCGAGGCTCCGATCGTCTTCTCGAAGGCGTGTGAACTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATCGCGATGCAGAGCAAGAAGAGGATGCTTCACAAAGAGGATGTGGCTTCCGCCATTTTGGCCACTGATGTTTTCGATTTTCTCATCGGATTGATCTTCAATGAAACAGCCGCCGCTGCCGGCGACCTTGTTGAAACTGAAACTATGTCCATTCCTTGCTGA

Coding sequence (CDS)

ATGATTCAAATTGGAATCGAAGAAGTATCTCTGTTTCCGGTCAAAAGCAGAGCAGGGAGGAATATTCCGATGAGGCAAGCGGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCATTCCCTGCCCTTGGCGAGGATAAAGAAGATCATGAAGAAATCCGGTGAGGAGGTGAAGATGATCTCCGGCGAGGCTCCGATCGTCTTCTCGAAGGCGTGTGAACTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATCGCGATGCAGAGCAAGAAGAGGATGCTTCACAAAGAGGATGTGGCTTCCGCCATTTTGGCCACTGATGTTTTCGATTTTCTCATCGGATTGATCTTCAATGAAACAGCCGCCGCTGCCGGCGACCTTGTTGAAACTGAAACTATGTCCATTCCTTGCTGA

Protein sequence

MIQIGIEEVSLFPVKSRAGRNIPMRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAAAAGDLVETETMSIPC

Homology

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BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_038877432.1 (nuclear transcription factor Y subunit C-1-like [Benincasa hispida])

HSP 1 Score: 219.2 bits (557), Expect = 2.3e-53
Identity = 113/123 (91.87%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET------AAAAGDLVETETMS 141
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET      AAA GDL E+E MS
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETATATAAAAAGGDLAESENMS 120

[Close]

BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_008452022.1 (PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis melo] >KAA0044837.1 nuclear transcription factor Y subunit C-1-like [Cucumis melo var. makuwa] >TYK16627.1 nuclear transcription factor Y subunit C-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 218.0 bits (554), Expect = 5.1e-53
Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAAAAGDLVETETMSIPC 141
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAA AGD+ E+E +S+ C
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117

[Close]

BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_004146566.1 (nuclear transcription factor Y subunit C-3 [Cucumis sativus] >KGN53346.1 hypothetical protein Csa_014665 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA--AAAGDLVETETMSIPC 141
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA  AA GDL E+ET+S+ C
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETATPAATGDLGESETISVGC 119

[Close]

BLAST of CcUC07G135750 vs. NCBI nr
Match: KAG6577185.1 (hypothetical protein SDJN03_24759, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 12   FPVKSRAGRNIPMRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFS 71
            F  K+ A  NI MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFS
Sbjct: 1072 FRSKAEAEGNILMRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFS 1131

Query: 72   KACELFIEELTKRSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET-----AAA 131
            KACELF+EELTKRSWMIAMQSKKRMLHKEDVASAILATD+FDFLIGLIF+ET     A+A
Sbjct: 1132 KACELFVEELTKRSWMIAMQSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTAASASA 1191

Query: 132  AGDLVETETMSIP 140
            A +L E+ETMSIP
Sbjct: 1192 AAELPESETMSIP 1204

[Close]

BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_023552994.1 (nuclear transcription factor Y subunit C-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 8.2e-51
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET----AAAAGDLVETETMSIP 140
           RSWMIAMQSKKRMLHKEDVASAILATD+FDFLIGLIF+ET    A+AAGDL E+ETMSIP
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTPAASAAGDLAESETMSIP 120

[Close]

BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 64  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 123

Query: 101 DVASAILATDVFDFLIGL-----IFNETAAAAGDLVETETMS 138
           D+A+AI  TD+FDFL+ +     I +E A   G +V   T S
Sbjct: 124 DIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTAS 164

[Close]

BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21
Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           H LPLARIKKIM K+ E+V+MIS EAP++F+KACELFI ELT RSW+ A ++K+R L + 
Sbjct: 68  HQLPLARIKKIM-KADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRN 127

Query: 101 DVASAILATDVFDFLIGLIFNETA 125
           DVA+AI  TDVFDFL+ ++  E A
Sbjct: 128 DVAAAIARTDVFDFLVDIVPREEA 150

[Close]

BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 77  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 136

Query: 101 DVASAILATDVFDFLIGLIFNE---------TAAAAGDLVETETMSIP 140
           D+A+AI  TD+FDFL+ ++  E         +A   G +V      +P
Sbjct: 137 DIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVP 183

[Close]

BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20
Identity = 48/79 (60.76%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           HSLPLARIKKIM K+ E+V+MIS EAP++F+KACE+FI ELT RSWM   ++K+R L K 
Sbjct: 100 HSLPLARIKKIM-KADEDVRMISAEAPVIFAKACEIFILELTLRSWMHTEENKRRTLQKN 159

Query: 101 DVASAILATDVFDFLIGLI 120
           D+A+AI  TD++DFL+ ++
Sbjct: 160 DIAAAITRTDMYDFLVDIV 177

[Close]

BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.5e-20
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           HSLPLARIKKIM K+ E+V+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K 
Sbjct: 69  HSLPLARIKKIM-KADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKN 128

Query: 101 DVASAILATDVFDFLIGLIFNE 123
           D+A+A+  TD+FDFL+ ++  E
Sbjct: 129 DIAAAVTRTDIFDFLVDIVPRE 149

[Close]

BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A5A7TSI3 (Nuclear transcription factor Y subunit C-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004550 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53
Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAAAAGDLVETETMSIPC 141
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAA AGD+ E+E +S+ C
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117

[Close]

BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A1S3BSA0 (nuclear transcription factor Y subunit C-1-like OS=Cucumis melo OX=3656 GN=LOC103493153 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53
Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAAAAGDLVETETMSIPC 141
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAA AGD+ E+E +S+ C
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAATAGDVGESENISVGC 117

[Close]

BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A0A0KZN6 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049050 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA--AAAGDLVETETMSIPC 141
           RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETA  AA GDL E+ET+S+ C
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETATPAATGDLGESETISVGC 119

[Close]

BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A6J1J883 (nuclear transcription factor Y subunit C-4-like OS=Cucurbita maxima OX=3661 GN=LOC111483463 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.7e-50
Identity = 107/123 (86.99%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFSKACELFIEELTK
Sbjct: 1   MRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFSKACELFIEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET-------AAAAGDLVETETM 140
           RSWMIAM SKKRMLHKEDVASAILATD+FDFLIGLIF+ET       A+AAGDL E+ETM
Sbjct: 61  RSWMIAMHSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTAASASASAAGDLPESETM 120

[Close]

BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A6J1EZM2 (nuclear transcription factor Y subunit C-4-like OS=Cucurbita moschata OX=3662 GN=LOC111437669 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.7e-49
Identity = 105/121 (86.78%), Postives = 112/121 (92.56%), Query Frame = 0


Query: 24  MRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTK 83
           MRQAGAYSGV YWKTGPHSLPLARIKKIMKKSGE+VKMIS EAPIVFSKACELF+EELTK
Sbjct: 1   MRQAGAYSGVTYWKTGPHSLPLARIKKIMKKSGEDVKMISAEAPIVFSKACELFVEELTK 60

Query: 84  RSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNET-----AAAAGDLVETETMSI 140
           RSWMIAMQSKKRMLHKEDVASAILATD+FDFLIGLIF+ET     A+AA +L E+ETMSI
Sbjct: 61  RSWMIAMQSKKRMLHKEDVASAILATDIFDFLIGLIFHETTTAASASAAAELPESETMSI 120

[Close]

BLAST of CcUC07G135750 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 )

HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 64  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 123

Query: 101 DVASAILATDVFDFLIGL-----IFNETAAAAGDLVETETMS 138
           D+A+AI  TD+FDFL+ +     I +E A   G +V   T S
Sbjct: 124 DIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTAS 164

[Close]

BLAST of CcUC07G135750 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 )

HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 77  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 136

Query: 101 DVASAILATDVFDFLIGLIFNE---------TAAAAGDLVETETMSIP 140
           D+A+AI  TD+FDFL+ ++  E         +A   G +V      +P
Sbjct: 137 DIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVP 183

[Close]

BLAST of CcUC07G135750 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 )

HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           H LPLARIKKIM K+ E+V+MIS EAPI+F+KACELFI ELT RSW+ A ++K+R L K 
Sbjct: 77  HQLPLARIKKIM-KADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKN 136

Query: 101 DVASAILATDVFDFLIGLIFNE---------TAAAAGDLVETETMSIP 140
           D+A+AI  TD+FDFL+ ++  E         +A   G +V      +P
Sbjct: 137 DIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVP 183

[Close]

BLAST of CcUC07G135750 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 )

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           HSLPLARIKKIM K+ E+V+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K 
Sbjct: 79  HSLPLARIKKIM-KADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKN 138

Query: 101 DVASAILATDVFDFLIGLIFNE 123
           D+A+A+  TD+FDFL+ ++  E
Sbjct: 139 DIAAAVTRTDIFDFLVDIVPRE 159

[Close]

BLAST of CcUC07G135750 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 )

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21
Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 41  HSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKE 100
           HSLPLARIKKIM K+ E+V+MIS EAP+VF++ACE+FI ELT RSW    ++K+R L K 
Sbjct: 69  HSLPLARIKKIM-KADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKN 128

Query: 101 DVASAILATDVFDFLIGLIFNE 123
           D+A+A+  TD+FDFL+ ++  E
Sbjct: 129 DIAAAVTRTDIFDFLVDIVPRE 149

The following BLAST results are available for this feature:

BLAST of CcUC07G135750 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877432.1	2.3e-53	91.87	nuclear transcription factor Y subunit C-1-like [Benincasa hispida]	[more]
XP_008452022.1	5.1e-53	93.16	PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis melo] >KAA00...	[more]
XP_004146566.1	2.0e-52	93.28	nuclear transcription factor Y subunit C-3 [Cucumis sativus] >KGN53346.1 hypothe...	[more]
KAG6577185.1	3.7e-51	82.71	hypothetical protein SDJN03_24759, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023552994.1	8.2e-51	90.00	nuclear transcription factor Y subunit C-4-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMP0	1.4e-21	55.88	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
A6BLW4	5.4e-21	61.90	Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9FMV5	5.4e-21	50.93	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q655V5	1.6e-20	60.76	Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9ZVL3	3.5e-20	58.54	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CcUC07G135750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TSI3	2.5e-53	93.16	Nuclear transcription factor Y subunit C-1-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3BSA0	2.5e-53	93.16	nuclear transcription factor Y subunit C-1-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KZN6	9.4e-53	93.28	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G0490...	[more]
A0A6J1J883	5.7e-50	86.99	nuclear transcription factor Y subunit C-4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EZM2	1.7e-49	86.78	nuclear transcription factor Y subunit C-4-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of CcUC07G135750 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48590.1	1.0e-22	55.88	nuclear factor Y, subunit C1	[more]
AT5G63470.1	3.8e-22	50.93	nuclear factor Y, subunit C4	[more]
AT5G63470.2	3.8e-22	50.93	nuclear factor Y, subunit C4	[more]
AT1G08970.4	2.5e-21	58.54	nuclear factor Y, subunit C9	[more]
AT1G54830.2	2.5e-21	58.54	nuclear factor Y, subunit C3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 42..106 e-value: 4.0E-18 score: 65.4
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 26..119 e-value: 1.7E-30 score: 107.7
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 37..115
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 24..125
None	No IPR available	PANTHER	PTHR10252:SF41	HAP5 SUBUNIT OF HAP COMPLEX	coord: 24..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G135750.1	CcUC07G135750.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity