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CcUC07G135750 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAAGCAAATTTCCACAGTTTACTCAAATTATTTGTTGAAATCATAAGGTTACGAGACTTCAAAAGCTCGACTATTGTTAAATGAATGTATATTCCAACCCTAAAAGGTATGTTTTGTCTTTTAAGCAATAATTAATATATATATATATATATATATATATTCAAATCAACAATGATGTGTTCTAGTTTGTTTGTTTTGCTGTTTTGCTTATGTTGTCCTAAAAAAATAATTAGTAATAATTGATGTATTAAGATCTATAATCAACCTATAAGCATGGTCTAAACCCAAGTCAAACTAGATTAAAATCAGAAATAAGTGACATGAATATAAGTTCAAATAAAGGCATATATTAGATACATACATTACAGACATAAAACACATAATAAATATTACCCCATAAAATGATTAATGTTTTATTGCATCAAAATTCAAATGTTAGACTATAAATTTAATTGTTTGGGGGATTGTAATGTAATGAGTTTGGATTGTTTTGTTGTTTTCATGTTTCACGATTCCATCTCTGTTCCGCCTTCAATACCTCATGCATTCCAACACTCCTCTTATTTCCAATAATCTTAATTACATTCCAACCTCCCAAACAACCTTTTAGGTTCTAAGGCTCCGTTTGAAAATCATTTGGCTTTTGAAAATTAATTCTATTTCTTCCTAGATTCTTATAATGATTTTCATCTTTCTTGATTAAAAGAGTTGAATTCTTAGTCAAATTCTAAAAACAAAAACAAGTTCTTAAAAAACTACTTTTTCAAGTTTTTTAGATTTGACTTGGTTTTTTAAAACATTGGTAAAAAGTAGATAACAAAACAAAAAAACTTAAAGATGGAAGTAGTATTTATAAACTTAATTTTCAAAAACCAAATAGTTCCAAAACGAAGCCTAAACTTTCGATTTTCTTAAAATTCACATATTTGTAAAAGGGTGTTTAAGACAAGGGTAAAATTGTTAAATTTGAGCAAGTGTTAAGTCTATAGAAATTGCTTTGTCGTACAGCTCATAAGGTTTGAGAGTCTATAATGAAATAATTATAAGGTTTGAAGTGATGTTTTCTAGTTATGAGACCCACAAACACTTTGGTAAAACACTCTAAAACTTTAGAGTTTGATTAGACAAATTTAAATTTACATTAATAGATGAATTGATTTTAAAATTTTTAAAAATATGTCAAGAAAATATTATATTGAAATTGAAGCTTCATGCTTTCAATATATATTAGAAATTTTTGGAAGTTGGAGTAAGTAAATACAAGGCTCACAGTTCACTAAATTTAAAATTTAAACAAAAATTCAAACAGTAAGGTTGAAATTTGAATGATTAACTTAATATATGAGAGTGACATCACCCAAAAGGTATAATTTGTGTGATTGTGTCAAGCAACAAAAACAAATATTTAAATTGAAAGCAACCAATAACGACGGCTAATATGTGTTTAAACGTTAAAATTATAAGGTTGGTGTTAATTAATTATCATAAACCTTCCCTTAAATATGGAAGAAAACGAAAAAAAAAAAAAAAAAAAAGAAAAAAAGTGTTAATTGGACGGAGTAACCTTAATCGGAGCAGGCTGGCCGGCTGCAGCAGCATTCCACAACTCCTATAAATTCACATCTCCTCCTCAGTTCAAATTGGAATCGAAGAAGTATCTCTGTTTCCGGTCAAAAGCAGAGCAGGGAGGAATATTCCGATGAGGCAAGCGGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCATTCCCTGCCCTTGGCGAGGATAAAGAAGATCATGAAGAAATCCGGTGAGGAGGTGAAGATGATCTCCGGCGAGGCTCCGATCGTCTTCTCGAAGGCGTGTGAACTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATCGCGATGCAGAGCAAGAAGAGGATGCTTCACAAAGAGGATGTGGCTTCCGCCATTTTGGCCACTGATGTTTTCGATTTTCTCATCGGATTGATCTTCAATGAAACAGCCGCCGCTGCCGGCGACCTTGTTGAAACTGAAACTATGTCCATTCCTTGCTGA ATGATTCAAATTGGAATCGAAGAAGTATCTCTGTTTCCGGTCAAAAGCAGAGCAGGGAGGAATATTCCGATGAGGCAAGCGGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCATTCCCTGCCCTTGGCGAGGATAAAGAAGATCATGAAGAAATCCGGTGAGGAGGTGAAGATGATCTCCGGCGAGGCTCCGATCGTCTTCTCGAAGGCGTGTGAACTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATCGCGATGCAGAGCAAGAAGAGGATGCTTCACAAAGAGGATGTGGCTTCCGCCATTTTGGCCACTGATGTTTTCGATTTTCTCATCGGATTGATCTTCAATGAAACAGCCGCCGCTGCCGGCGACCTTGTTGAAACTGAAACTATGTCCATTCCTTGCTGA ATGATTCAAATTGGAATCGAAGAAGTATCTCTGTTTCCGGTCAAAAGCAGAGCAGGGAGGAATATTCCGATGAGGCAAGCGGGAGCATATTCCGGCGTGATGTACTGGAAGACAGGGCCGCATTCCCTGCCCTTGGCGAGGATAAAGAAGATCATGAAGAAATCCGGTGAGGAGGTGAAGATGATCTCCGGCGAGGCTCCGATCGTCTTCTCGAAGGCGTGTGAACTGTTCATCGAAGAATTGACGAAGAGATCGTGGATGATCGCGATGCAGAGCAAGAAGAGGATGCTTCACAAAGAGGATGTGGCTTCCGCCATTTTGGCCACTGATGTTTTCGATTTTCTCATCGGATTGATCTTCAATGAAACAGCCGCCGCTGCCGGCGACCTTGTTGAAACTGAAACTATGTCCATTCCTTGCTGA MIQIGIEEVSLFPVKSRAGRNIPMRQAGAYSGVMYWKTGPHSLPLARIKKIMKKSGEEVKMISGEAPIVFSKACELFIEELTKRSWMIAMQSKKRMLHKEDVASAILATDVFDFLIGLIFNETAAAAGDLVETETMSIPC Homology
BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_038877432.1 (nuclear transcription factor Y subunit C-1-like [Benincasa hispida]) HSP 1 Score: 219.2 bits (557), Expect = 2.3e-53 Identity = 113/123 (91.87%), Postives = 114/123 (92.68%), Query Frame = 0
BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_008452022.1 (PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis melo] >KAA0044837.1 nuclear transcription factor Y subunit C-1-like [Cucumis melo var. makuwa] >TYK16627.1 nuclear transcription factor Y subunit C-1-like [Cucumis melo var. makuwa]) HSP 1 Score: 218.0 bits (554), Expect = 5.1e-53 Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0
BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_004146566.1 (nuclear transcription factor Y subunit C-3 [Cucumis sativus] >KGN53346.1 hypothetical protein Csa_014665 [Cucumis sativus]) HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52 Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CcUC07G135750 vs. NCBI nr
Match: KAG6577185.1 (hypothetical protein SDJN03_24759, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51 Identity = 110/133 (82.71%), Postives = 118/133 (88.72%), Query Frame = 0
BLAST of CcUC07G135750 vs. NCBI nr
Match: XP_023552994.1 (nuclear transcription factor Y subunit C-4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 210.7 bits (535), Expect = 8.2e-51 Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.4e-21 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21 Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 5.4e-21 Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q655V5 (Nuclear transcription factor Y subunit C-4 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC4 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20 Identity = 48/79 (60.76%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.5e-20 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A5A7TSI3 (Nuclear transcription factor Y subunit C-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004550 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53 Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A1S3BSA0 (nuclear transcription factor Y subunit C-1-like OS=Cucumis melo OX=3656 GN=LOC103493153 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 2.5e-53 Identity = 109/117 (93.16%), Postives = 113/117 (96.58%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A0A0KZN6 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G049050 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 9.4e-53 Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A6J1J883 (nuclear transcription factor Y subunit C-4-like OS=Cucurbita maxima OX=3661 GN=LOC111483463 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.7e-50 Identity = 107/123 (86.99%), Postives = 112/123 (91.06%), Query Frame = 0
BLAST of CcUC07G135750 vs. ExPASy TrEMBL
Match: A0A6J1EZM2 (nuclear transcription factor Y subunit C-4-like OS=Cucurbita moschata OX=3662 GN=LOC111437669 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.7e-49 Identity = 105/121 (86.78%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of CcUC07G135750 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 ) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 0
BLAST of CcUC07G135750 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 ) HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22 Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of CcUC07G135750 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 ) HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22 Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of CcUC07G135750 vs. TAIR 10
Match: AT1G08970.4 (nuclear factor Y, subunit C9 ) HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0
BLAST of CcUC07G135750 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 ) HSP 1 Score: 99.4 bits (246), Expect = 2.5e-21 Identity = 48/82 (58.54%), Postives = 65/82 (79.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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