CcUC07G135720 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G135720
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Transcription initiation factor IIE subunit beta
Location	CicolChr07: 18663110 .. 18670934 (+)
RNA-Seq Expression	CcUC07G135720
Synteny	CcUC07G135720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCTCTCTCTCTCCCTCGCGCTTTCCCAATTCCAGCTTCCATCTTCATTCTTCTCGACCTCCATAGCTGCACAAACTGAACTCGATTCAACAATCAACTCCATTGCGTATACTACATATTATTAAACATCGACCCGCGATCCCACCGTCGTCTTATCCACGGCGGTTGATTCTGGTCTGCCTAACCGATGCAATTTGTGGTATTCGACTAACTACCCTTTTCTTTTCGGGGTATTTTCAATTTTGGGTTGGGCTTTACGGGATGCCCGGCAATTTGATAATTGGATGAATCTATTTTGATGATCTTTATCGTTATTTTGATTATAGGGTTGAGAATAATTGAAAACTGTGAGAGGATTCAATGGCGTTGCAAGAACAACTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAGACTACTTTGTCTGGCATTGCTGCATCCAAGTCTGCGTCCAAGTCTACACCCAAGTTTACGCCTGCACCAGCTGTTTCCATTGCAAGACCTCCGGCTCCTGCTGTAAAATTTTCAAATGATACTGAGAGACTTCAACACATTAACAGCATAAGGAAATCCCCTGTCGGGGCTCAAATCAAGAGGGTTATTGACCTGCTGCTGGAGGTTCACACCCATCACCCATCTTTCTTATTTTCCCCCTTTTGTTTTCTTCCTTCTAGCTTATTTGTTTTACTTGGTTTCTTGTGTTTGATCGAATTCTTCAATGTAAGGTTTCGTATACGACAGGATCTAGTGGACCGTGTATTGATTTGAACTGTGTAGAGCGTATGCTGAAATTTCGCATTATTAATCTGTCCAAGTTTCATAAATGCCATATGTGTTTTTTTTCTTTTCTTTTTTCCCTTTTTTTTTTTTTTTTTTTTTAATGGATACCTTTTTAACCGGGAGATTTGGCTGGCATGAGAACTTTTTCGGGTAGTGACACTTGTGATTGGCATTAGATAGAAAGTGGAGCTAGGATCCTCTTCAGTGGCTTTTGGGTGGTCGTTTTCCTTACTTTTTGTTGGTGAACAAAATGTATTTTTACAGGCAAATTACATATGTTAATCCCCTTCCCGTGCTCTCTGGGTTTTGAATTGGCTGTGAAAAGGCTAAATAAAAGTCATTCTTAAATGCATTTTTCCTCTACTGGTAGTAAATTGGAACCTTAGAGGTATGTTACAATCTTACAGCTTGCTTATGTGCATGTTAACAGACAAGGCAAGCCTTTACACCTGAGCAAATCAATGAAGCATGTTATGTTGATATAAATTCCAACAAGGCTGTCTATGACAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGGCGTTTCTCATACAAGGTAATTTATATTCACAAACACTTGTATAATTTGCATCTGACTTGTACTTATTTGGTTTAAAAGTTTGGACCTTCAGGATGACAACTTTTCCCTCTTTTTTCTGTTTTTGGTGTATTCAGTCCAAGCATGACCTGAAGGATAAGAGTCAACTTCTTTACTTGATTCGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATGCTTATCCAAGCGTTATGGAGGACTTGCAAGTATGTATAATATATATATATATATATATATATATATATATATATAATTTGCTTTTTCTATTTTGAATGCGGAAAAGTGCAAAATAACAAATGACCATTGAATGACGCTATCCTTATTTTAACTGCTTGGGCAAAATAACCTTTGTGAAGTTCAACATATTTGGCTATTTTGGACATCAAATGTCTTGTGTAATTCTTGAGCTTTTAAGCTTGTGTATTTTATTTGCACACTAATCAGAATTATAGTTTGTTTATAATTCTAATTACCTCGGAGTATGTACAAGAGTCTGTTGGGATCTGGATTCTTTTTTTAGGGAAGAAACATTTCTTTGAAAGAATGAAATAAGGGCTGGGATCTGGATTCTTAGTTTTATACAGTATATAAATACAATGTAAATTAAGGTCTCCAAGTTATTAAGTTTTCATTTGTCTATTAAAGGGGTAGTTTGAGAATGTTGTGAGAAACAACTTTCTGTGGTTGCTGGATGTACAGAATAGCCTCAGACAATCAACCATACAAAAACTGTTTTTGAAAAGAAGAGGAAAGATTCATTTTAAATAACTATGAGAAAAGCCCCGAATTTCCTTTGCTAGTATACTCCTTGTGTTTCCTTTCCCTGTTTTTTCCCCTCTCCAACCCCTAAAAAGCTTGGGCACTTTAGTTTGACTAGTGTGTCTGTGCCCAACACTTGTCGGATACGTATCAGATATTTGTTAATGTAATAGTTGTTTAGCCAGTTATTCAAAGTCAAAATAGAAACATCATTTGGTAGGCATGTATCAAACATTTGTTAGTTACATGTATTAAATAGATACATATATGACACAAATGAAACTAATTTTTTAAGCAAATAAATGAATTAAACTTTTTGACTCTAAATTTCCTTCTGGTTTAAAAATGATTTATATTTTAAAAAATATATGTTCTAATAAATATTTCTTTGTTGTGCCAGTATCCTAAATTTTAAAAAATGATGTGTTGTCATGTCTGTGTAGTATTGTATCCATGTCTTGTATCTATATCCATGCTTCTTAGCCATCCCACCTTAGGAGTTAGTATCATACTGGATTTAGAGCAAACTCGTTCCTACTTGCAGAAATATGATTGATGCCTGTATGGCTTACTGACTATTCATGCCGACGTTCAAGGTTCTTGTTCATGCTATACTTCGTAAGTCCGTCTGTTTAATTTTCTTCCTGGTTAGACTGTGGAATCTCCTTGTACATTAGGAGGTTTTGTTCATCCAACAATTCCTATCCCAAAAGTCGTAGAGAATAGTGCTAATCATTAGCAACTAAAATTTAGATTGAAGGATTTAACCCCATGATTTATAGTCCTTGTCAAAACAAATTGTTTTGCTAATGAGGAGCTAAACTTCTTTTAAGAAACATGATATAATTCAGAAGTGGAAACAAAAGGACAATTCAACAACAGGAGCTAATCCGAGAATAACTATACGAAAAAGGGCTCAAATCTAAAGTCTAAGGTCTAACAAATAACTACAATTCTTGGAAACCAATGTACATTACACAGAAAGAAGCATTAAACTTAGGGGTGCATCTACATTGTAGTTGAGAATTTGCAAAAATTGACAAGAAACATTTTGGGTATAAATGTGGATGTGGGTTTGTGTTAGGAATGTGAATTACTCGATTCTTATTAATGGCTCTCCGAAGGGATCGATAATGGCGTCTAGAGGTTTGAGACATGGCAGTCGTTTATCTCCTTTCTTGTTCCTTTTGGTAGTGGATGTTCTGAGTCGTATTGTCATTAGGTGGTAGAAGGAAGCATTTTTGAGCCTTTTAAAGTGGGTTCTAAGGAGGTGGCGTTGTCTTATTTGCAATTGTTGATGATGCAGTGTTTTTTTGTTATGGCAAAGAGGAGTCCTTTCTTATCCTAAATCACATTCTAAGGCTCTTTGAGGCGATGTTAGGACATAAATTTAATAGGAGTAAGTGTCAAATTTTGGAGTTAAACTGTGATCTGGTGAAACTTAATAGATGGGTGGGTTTGGTTGGTTGTGAGGTTGTCTCTTTTCCTTGTTCCTACCTTGGTCTTGCTCTAAGAGGTGGGCTTGTCTTATTTGCAATTTGTTGACGATGTGGTTTTTTATTATTATTATTTTTATTTATTATTTTTATTTAAATTTTTATGGCAAGGAGGAGTCCTTTCTTATCATAAATCTCATTCTACAGCTCTTTGAGGCTATGTTGGGACTTAAATTAATCTGGTGAAACTTAATAGATGGGTGGATTTGGTTGGTTGTGAGGTTGGCTCTTTTCCTTCTTCCTACCTTGATCTTGCTCTCGGAGGTAATTTGAGAGCTATCTCTTTTTGGGATGGTCCCATTGAGAAGACTTACTTTAATCAGATCAGTGTTGAGTGAAATTCCTATCTATTACCTTTCTCTGTTTCGGGCAGTTGTGTCAATGTGTAAAAACATGAAGGAGCTTATCAGAGTCTTCCTCTTGGAAGGGGTGGAAGAACGGAGAGGTTCTCATCTTGTTAGCTGGGAAGTGGTCGGGAATTTAACCATCATGGGTTGGCTTGGTGGTAAAAAAAGAGACATAGTCTCAATAAATGGCTAAGAGGTTAAGGGCTCAATCAATGGTGGCCACCTACATAAGATTTAATATCTTACAAGTTTTCTTGACACTCAAATGTTGTAGGGTCAAATGGGTTTTCGTGAGATTAGTCGAGGTGCATGTAAGTTAGCCAAGACACTCACAGATATCAAAAAAAAAAAAAAAAGAAAAAAAGAAAAAAAAGAAAAAAGAAAAAAAAAAAAAACGGTCCTCACCCATGAGTAAGGCATGTATCGAAATTTGTGGAAAGATATTTCTTTTGAGCCCTCTTTCCATTTCTCATCTTGTCTGTTGTGTTATGGGGGAAGAGAAGGAAACTTGGAAGATCATTGGGTGGGGGATAAACCTCTCTCTTCTGCGTTGCCTTGGTTATATCATCTGTCCTCCTTTAAAAGTCTTCATGTGTCTAATTTTCTGGTTTGCTCGAGGAGCTCTGTGTCTATCCTTTAGTTTTTTGTCGTCCTTTGTCCAATAGGGAAACAACAAAGGTAGCCTCTCTTCTTATTCTGGTTGAGGGTTTCAACTTTATGCGTGCGGGTGGATATTTGTGTTTGGTGTCCTAACCCTTTAGAGGGATGATCTTGTAAGTCTTCCTTTAGGATGTAATTGGACCACTTTCCTGCTTGAAAGTTGGTCTTTGATGTATTCGGGAGGATTAAGATTCCAAAGAAAATTAAGTTCTTTTCTTGGAAAGTCTTGCTTGGCAGTGTGAACACATTAAATAGGCTGTTGATAAAGTTGCCTTTGTTATTGGGTCTTTTTTTGTTGTATACTTTGTCGAAAGGTGGAGGAAAACCTAAATCATCTTCTCTACGAGTGCCAATGCGCGAGGTCTATGTGGAATTGTTTCCTTCATGAGTTAATGTTGTGCTTGCTCGCTAGAGTGATGTTTGTTCGATGATCGGGGAGTTCCTCCTTCGTCTACCTTTCAAAGAGAAATGGTATTTTTTGTGGCACGTAAGGGTGTGTGCTCTATTGTGGGATATTTGGGGGAGAGGAACAACAAAGTGTTTAGAGGTGTGGATAGGGACCCTAGTGAAGTTTGGTCCTTGGTGAGATTCTATGTTTTCCGTTGGGCTTCCGTTTCAAAGACTTTTTATAATTATTCCCTAGGTAATAGCTGCAATATCTTACTTAGTTAGAAACCCTTTCTCTAGGGGGCTTTTGTAGGCTTGGTTTTTTGTATGCCTGTATATTCTTTCATTTTTCTCAATGAAAGCAGTTGTTTAAATCTATGAGAAACGTTTGCTTTTGGTATAAACCTATACATTAAGCTTGAAAAAGAATGGGTGGCAGGGCCTAAACATCCAAGTCATCCACAACTTTAGTTCCTCCAAGTAATCTTGGTAACCATGATAAAATAATTGAGGCCAGGATGAAGATGGAGAAACATTTTTTCTAATATATATATATATATATATATATATATATATATATATAAACACACACATACATTCAGAAACAATTGCTATCATTGAGAAAAGAATGAAAGAATACAAGGCCATACAAAAAGTAAGCCCGAAAAAAATCCTTAGAGAAAGGATTTCCAACCAGGCAAAGATGTTACCTAGATAATGACATGCTTTCATGGACAACTTGAAGATAACATGTTATTAAGCATGAAGACTGACCTTTTGGGGGGAATTTTTTTTTTTTCTTTTGATATCCATGAGTGTCTGGGCCAGCTTATGCGCATCTCGACTAATCTCACGGGACGACCTGCCTGACCCTACAACATTTGAGTGTCAAGGAAACTCATAGGAAATTAATTCTTAGGTAGATGACCACCATGGATTGAACCCTTGACCTATTAGTCATTCCTAGGTAGGGGGAAATTCAGAGATTCATAATGACTTAAGTAATGTCAACTTCCCAGGTAGGTATCGTGAGATCTTGGGAGTTTTCAGGTCTATGAGTTATATAATTTGTTATCTAAAATAAGGTTTGAAAAATCAACAATTCAAGCCTTCTTCATCCTATAAGTGAAAAAAAAGATGAGCTTTCCTAATGCTTGATGATGAGTTTATCAGGTATTTGACTAATAGATTACTATGGGAGTTCTGTTAGAATTTGGTTGTTCTTTTCATTATAAATATATGTCCATATTTATTATATAAAAATAACATAATATCTTATAGGTTAGGAATTTTACTTCTAAGTATGCTTTTGGGTTATGCATCTAGTTTAATTTTATAAGAAAAATGCTTTTGGGTTATGCATCTAATTTAATAAATATATGTGGAGTTATTCGTGGGTGTTTTACATTGAACCTAGTACTCATGTTTTTTTTTAGTTTTTCTCTTTTTATTTTATTTTTTTTGGGTAATGACATGATCCTCAGCTGCGGTAGGATGAACGGCTTGGAGGTTGTGTTTCTTGTGAAGTGATGTCTATTTGTTTCCATACCGTGTTGATTGCCACTCTTTTTGGGCTCCCAAACTTTGTAACTTTCTCTTTTGACGGAACCGGCACTTATATTATTGCAACTTCTTTGCTTGTATAATGAATGGAAAGCACATGGCTGCACTCCTCTTTCACTATATAATGAACGGAAAACACAGTCCATTAGCTTTACTTTTTAGCTTACACTATATTCCCCCTCTTGTTTAGGCCCTAAAAGCCTCAGGCCAGGTCTGGCTTCTCTCCAACTTTGATTCACAAGAAGATATTGCATACCCAAATGACCCTCGAATTCAAATCAAGGTAGACGATGATCTGAAGCAACTCTTTCGGGATATTGAATTACCTCGTGACATGCTTGATGTCGAAAAGGATCTGCAGAAGAATGGGATGAAGCCTGCAACCAACACAGCAAAGAGGCGAGCCAATGCACAACATGTAGCATCCTCAAAACCAAAGCCAAAGAAAAAGAAGCAAGAGATCAGCAAGAGAACTAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAACTAGAGAACTATATAGGCTGGGATGAAACAATAGTTATATGGTTCATTGACTCTGTAGATAAGATTTCAACCATCCCTTCTGTTTGGTGTATTGCCCTTCTTTTCCATGAATATCATCATAGAATGAAAATGCTCCTGTGGTCTACTTTTGTGTATGTCTTTGCTTTTACATCAATTAATTGAACAAATTGAAATGTAAGATATATGTTCAATCAAACTAGATATATGATATTAGAAGTTCATCATACATACCAACTTATGAATTATATTATTTCAAGTTGATTTGGTTTTAGAAGAAATTGATATGTGTAGCATTACTTCTATTCCTTAATTTCCCGCAGGCCTGTTTGCTTGAAGAAGGTTGTACTGCTGATGCCTCCCTGTTTAGTTTGGTTTTGGTTTTGGTTTTTGTACTTTCAATTATGACATTGATATAAATGTATTTTTCATTATTAGATTTGTGTATGTTTTTCATACGTTGGTTCATGACTTCTTATTATGTGGTGAGACTATTTCATGCATTGTGATTCATGACATTTTAATATGAAAATAGTGAGATGGTCACCCTATTGGATAATTCATCTTATTTAGTTGAGTTTGAGTCGATTGTTGTACAACCTATGATACGCCAATTTAATATTGGTTTATCAACAGAGAGCCAAGAGTAAGTACGAGACGATTCAACTAGAGACACAAATATAGGCACCAGACAAGACCAACCATGCGT

mRNA sequence

CATCTCTCTCTCTCCCTCGCGCTTTCCCAATTCCAGCTTCCATCTTCATTCTTCTCGACCTCCATAGCTGCACAAACTGAACTCGATTCAACAATCAACTCCATTGCGTATACTACATATTATTAAACATCGACCCGCGATCCCACCGTCGTCTTATCCACGGCGGTTGATTCTGGTCTGCCTAACCGATGCAATTTGTGGGTTGAGAATAATTGAAAACTGTGAGAGGATTCAATGGCGTTGCAAGAACAACTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAGACTACTTTGTCTGGCATTGCTGCATCCAAGTCTGCGTCCAAGTCTACACCCAAGTTTACGCCTGCACCAGCTGTTTCCATTGCAAGACCTCCGGCTCCTGCTGTAAAATTTTCAAATGATACTGAGAGACTTCAACACATTAACAGCATAAGGAAATCCCCTGTCGGGGCTCAAATCAAGAGGGTTATTGACCTGCTGCTGGAGACAAGGCAAGCCTTTACACCTGAGCAAATCAATGAAGCATGTTATGTTGATATAAATTCCAACAAGGCTGTCTATGACAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGGCGTTTCTCATACAAGTCCAAGCATGACCTGAAGGATAAGAGTCAACTTCTTTACTTGATTCGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATGCTTATCCAAGCGTTATGGAGGACTTGCAAGCCCTAAAAGCCTCAGGCCAGGTCTGGCTTCTCTCCAACTTTGATTCACAAGAAGATATTGCATACCCAAATGACCCTCGAATTCAAATCAAGGTAGACGATGATCTGAAGCAACTCTTTCGGGATATTGAATTACCTCGTGACATGCTTGATGTCGAAAAGGATCTGCAGAAGAATGGGATGAAGCCTGCAACCAACACAGCAAAGAGGCGAGCCAATGCACAACATGTAGCATCCTCAAAACCAAAGCCAAAGAAAAAGAAGCAAGAGATCAGCAAGAGAACTAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAACTAGAGAACTATATAGGCTGGGATGAAACAATAGTTATATGGTTCATTGACTCTGTAGATAAGATTTCAACCATCCCTTCTGTTTGGTGTATTGCCCTTCTTTTCCATGAATATCATCATAGAATGAAAATGCTCCTGTGGTCTACTTTTGTGTATGTCTTTGCTTTTACATCAATTAATTGAACAAATTGAAATGTAAGATATATGTTCAATCAAACTAGATATATGATATTAGAAGTTCATCATACATACCAACTTATGAATTATATTATTTCAAGTTGATTTGGTTTTAGAAGAAATTGATATGTGTAGCATTACTTCTATTCCTTAATTTCCCGCAGGCCTGTTTGCTTGAAGAAGGTTGTACTGCTGATGCCTCCCTGTTTAGTTTGGTTTTGGTTTTGGTTTTTGTACTTTCAATTATGACATTGATATAAATGTATTTTTCATTATTAGATTTGTGTATGTTTTTCATACGTTGGTTCATGACTTCTTATTATGTGGTGAGACTATTTCATGCATTGTGATTCATGACATTTTAATATGAAAATAGTGAGATGGTCACCCTATTGGATAATTCATCTTATTTAGTTGAGTTTGAGTCGATTGTTGTACAACCTATGATACGCCAATTTAATATTGGTTTATCAACAGAGAGCCAAGAGTAAGTACGAGACGATTCAACTAGAGACACAAATATAGGCACCAGACAAGACCAACCATGCGT

Coding sequence (CDS)

ATGGCGTTGCAAGAACAACTAGATAGGTTTAAGAAACAGCAAGAAAGATGTCAGACTACTTTGTCTGGCATTGCTGCATCCAAGTCTGCGTCCAAGTCTACACCCAAGTTTACGCCTGCACCAGCTGTTTCCATTGCAAGACCTCCGGCTCCTGCTGTAAAATTTTCAAATGATACTGAGAGACTTCAACACATTAACAGCATAAGGAAATCCCCTGTCGGGGCTCAAATCAAGAGGGTTATTGACCTGCTGCTGGAGACAAGGCAAGCCTTTACACCTGAGCAAATCAATGAAGCATGTTATGTTGATATAAATTCCAACAAGGCTGTCTATGACAGTCTGCGGAATAACCCAAAGGTGCACTATGATGGGAGGCGTTTCTCATACAAGTCCAAGCATGACCTGAAGGATAAGAGTCAACTTCTTTACTTGATTCGGAAATTTCCAGAAGGCATTGCTGTCATTGATCTCAAGGATGCTTATCCAAGCGTTATGGAGGACTTGCAAGCCCTAAAAGCCTCAGGCCAGGTCTGGCTTCTCTCCAACTTTGATTCACAAGAAGATATTGCATACCCAAATGACCCTCGAATTCAAATCAAGGTAGACGATGATCTGAAGCAACTCTTTCGGGATATTGAATTACCTCGTGACATGCTTGATGTCGAAAAGGATCTGCAGAAGAATGGGATGAAGCCTGCAACCAACACAGCAAAGAGGCGAGCCAATGCACAACATGTAGCATCCTCAAAACCAAAGCCAAAGAAAAAGAAGCAAGAGATCAGCAAGAGAACTAAGCTCACCAATGCACATCTTCCCGAGCTCTTCAAAAACTAG

Protein sequence

MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLLSNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN

Homology

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BLAST of CcUC07G135720 vs. NCBI nr
Match: XP_011653191.1 (general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothetical protein Csa_014626 [Cucumis sativus])

HSP 1 Score: 526.2 bits (1354), Expect = 1.7e-145
Identity = 271/277 (97.83%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQ+TLSGIAASKS SKSTPKFTPAPA SIARPPAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYL+RKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of CcUC07G135720 vs. NCBI nr
Match: XP_008452012.1 (PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_008452013.1 PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >KAA0044840.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa] >TYK16624.1 general transcription factor IIE subunit 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 522.7 bits (1345), Expect = 1.9e-144
Identity = 271/277 (97.83%), Postives = 274/277 (98.92%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQ+TLSGIAASKS SKSTPKFTPAPA SIARP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of CcUC07G135720 vs. NCBI nr
Match: XP_038906431.1 (general transcription factor IIE subunit 2-like [Benincasa hispida])

HSP 1 Score: 515.0 bits (1325), Expect = 4.0e-142
Identity = 269/277 (97.11%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQTTLSGIAA+KSASKSTPKFTPAPA S  RPPAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQTTLSGIAAAKSASKSTPKFTPAPAAS--RPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPK KKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKLKKKKQEISKRTKLTNAHLPELFKN 275

[Close]

BLAST of CcUC07G135720 vs. NCBI nr
Match: XP_022984812.1 (general transcription factor IIE subunit 2-like [Cucurbita maxima])

HSP 1 Score: 500.7 bits (1288), Expect = 7.8e-138
Identity = 260/277 (93.86%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQTTLSGIAASK+ + +TP+FTPAPA S  RPPAPA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of CcUC07G135720 vs. NCBI nr
Match: XP_022931511.1 (general transcription factor IIE subunit 2-like [Cucurbita moschata] >XP_023552207.1 general transcription factor IIE subunit 2-like [Cucurbita pepo subsp. pepo] >KAG7015180.1 General transcription factor IIE subunit 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137
Identity = 259/277 (93.50%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQTTLSGIAASK+ + +TP+FTPAPA S  RPPAPA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+CYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of CcUC07G135720 vs. ExPASy Swiss-Prot
Match: Q54KJ8 (General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 GN=gtf2e2 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 72/272 (26.47%), Postives = 142/272 (52.21%), Query Frame = 0


Query: 10  FKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSN-DTERLQHINSI 69
           FK+ Q +   TL+ I    S++ S  K+   P +S     + A + S+  T        +
Sbjct: 6   FKETQMKAIETLNSIKKPSSSTNSAFKY--IPKISGGGGSSSANRQSSIYTANTLRDKQV 65

Query: 70  RKSPVGAQIKRVIDLL--LETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGR- 129
           ++ P    +  +++ L  LE   A T E ++   ++ I+    + + LRNN K+   G  
Sbjct: 66  KEKPSNRIVYDIVNYLKTLEGIPADTKEIMHSTNHM-IDDKPEILELLRNNEKIIDHGND 125

Query: 130 RFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLLSNFDS 189
           RFS+K K +++ +  +L L+  +P GI V +L ++Y +   D++ LK + Q++ +   +S
Sbjct: 126 RFSFKPKFNVRTQRDILDLLPNYPGGILVSELAESYNNAESDVKKLKETKQIFAIKAAES 185

Query: 190 QEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRRANAQH 249
             DI +PND R+++ +  +L  +++ I+LP +  D+EK+++  G+    +  +   +A+ 
Sbjct: 186 ACDIIFPNDERLRVPLSSELVDMWKSIKLPNE-ADLEKEMKDAGL----SVVESVESARQ 245

Query: 250 VASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
             S+K K ++KK    + TK+TN H+     N
Sbjct: 246 TKSTKLKKERKK----RITKVTNTHIENFNPN 265

[Close]

BLAST of CcUC07G135720 vs. ExPASy Swiss-Prot
Match: P79011 (Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tfa2 PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-12
Identity = 60/205 (29.27%), Postives = 110/205 (53.66%), Query Frame = 0


Query: 75  AQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKVHYDGRR--FSYKSK 134
           +Q+   ++ L E  +  T E+I  A Y+       + + L+ N +++YD R   F++K  
Sbjct: 81  SQLHYAVEYLKERNEPKTAEEI--ASYLSTPLTPMLLNLLKKNNRIYYDERNETFTFKPL 140

Query: 135 HDLKDKSQLLYLI--RKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL-SNFDSQEDI 194
           H+++  + LL  +  +K   G+++ +L+D +P+V  +L+ L+  G+V LL +  D    +
Sbjct: 141 HNIRSGAGLLAYLDSQKTHVGMSIKELRDGWPNVTVELEELEKQGEVLLLRTRKDGVPKM 200

Query: 195 AYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPAT---NTAKRRANAQHV 254
            + ND      VD + +Q++ +I +P   LD+  +L K G+KP +   +T KR  + Q  
Sbjct: 201 VWRNDKSCDCHVDKEFQQVWHEIPIP-PTLDLASELGKYGLKPTSVDPSTVKRAGHNQ-- 260

Query: 255 ASSKPKPKKKKQEISKRTKLTNAHL 272
               PK KK K   ++R K+TN HL
Sbjct: 261 ---TPKQKKPK---TRRGKITNTHL 274

[Close]

BLAST of CcUC07G135720 vs. ExPASy TrEMBL
Match: A0A0A0KWU5 (Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=Csa_4G049080 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 8.4e-146
Identity = 271/277 (97.83%), Postives = 275/277 (99.28%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQ+TLSGIAASKS SKSTPKFTPAPA SIARPPAPAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPPAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYL+RKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLVRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of CcUC07G135720 vs. ExPASy TrEMBL
Match: A0A1S3BS95 (Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC103493148 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.3e-145
Identity = 271/277 (97.83%), Postives = 274/277 (98.92%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQ+TLSGIAASKS SKSTPKFTPAPA SIARP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of CcUC07G135720 vs. ExPASy TrEMBL
Match: A0A5A7TNR4 (Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004520 PE=3 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 9.3e-145
Identity = 271/277 (97.83%), Postives = 274/277 (98.92%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQEQLDRFKKQQERCQ+TLSGIAASKS SKSTPKFTPAPA SIARP APAVKFSNDTE
Sbjct: 1   MALQEQLDRFKKQQERCQSTLSGIAASKSVSKSTPKFTPAPAASIARPLAPAVKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 277

[Close]

BLAST of CcUC07G135720 vs. ExPASy TrEMBL
Match: A0A6J1J372 (Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482983 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.8e-138
Identity = 260/277 (93.86%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQTTLSGIAASK+ + +TP+FTPAPA S  RPPAPA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of CcUC07G135720 vs. ExPASy TrEMBL
Match: A0A6J1ETU7 (Transcription initiation factor IIE subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111437664 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.5e-138
Identity = 259/277 (93.50%), Postives = 272/277 (98.19%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MALQE+LDRFK+QQERCQTTLSGIAASK+ + +TP+FTPAPA S  RPPAPA+KFSNDTE
Sbjct: 1   MALQEKLDRFKRQQERCQTTLSGIAASKTTT-TTPRFTPAPAAS--RPPAPAIKFSNDTE 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINE+CYVDINSNKAV+DSLRNNPKV
Sbjct: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINESCYVDINSNKAVFDSLRNNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWLL 180
           HYDGRRFSYKSKHDLKDK+QLLYLIRKFPEGIAVIDLKD+YPSVMEDLQALKASGQVWLL
Sbjct: 121 HYDGRRFSYKSKHDLKDKNQLLYLIRKFPEGIAVIDLKDSYPSVMEDLQALKASGQVWLL 180

Query: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKRR 240
           SNFDSQEDIAYPNDPRIQIKVDDDLKQLFR+IELPRDMLDVEKDLQKNGMKPATNTAKRR
Sbjct: 181 SNFDSQEDIAYPNDPRIQIKVDDDLKQLFREIELPRDMLDVEKDLQKNGMKPATNTAKRR 240

Query: 241 ANAQHVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 278
           ANAQ+VASSKPKPKKKKQEISKRTKLTNAHLPELFKN
Sbjct: 241 ANAQNVASSKPKPKKKKQEISKRTKLTNAHLPELFKN 274

[Close]

BLAST of CcUC07G135720 vs. TAIR 10
Match: AT4G20330.1 (Transcription initiation factor TFIIE, beta subunit )

HSP 1 Score: 358.6 bits (919), Expect = 4.5e-99
Identity = 194/280 (69.29%), Postives = 235/280 (83.93%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAP-AVSIARPPAPAVKFSNDT 60
           MAL+EQLD+F KQQ +CQ+TLS IA+S+  + S+ +  P P A++  +P A  VKFS+DT
Sbjct: 1   MALKEQLDKFNKQQVKCQSTLSSIASSRERTSSSRQNVPLPAAITQKKPDAAPVKFSSDT 60

Query: 61  ERLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPK 120
           ERLQ+IN+IRK+PVGAQIKRVIDLL E R A TPEQINE C+VD+++NKAV+DSLR NPK
Sbjct: 61  ERLQNINNIRKAPVGAQIKRVIDLLYERRLALTPEQINEWCHVDMHANKAVFDSLRKNPK 120

Query: 121 VHYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQVWL 180
            HYDGRRFSYK+ HD+ DK+QLL L+RK+ +GIAV+DLKDAYP+VMEDL+AL ASG ++L
Sbjct: 121 AHYDGRRFSYKATHDVNDKNQLLSLVRKYLDGIAVVDLKDAYPNVMEDLKALSASGDIYL 180

Query: 181 LSNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKR 240
           LSN  SQEDIAYPND + +IKVDD+ K LFRDI +P DMLDVEK+L K G+KPATNTA+R
Sbjct: 181 LSN--SQEDIAYPNDFKCEIKVDDEFKALFRDINIPNDMLDVEKELLKIGLKPATNTAER 240

Query: 241 RANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN 278
           RA AQ H  S+KPK  KKKKQEISKRTKLTNAHLPELF+N
Sbjct: 241 RAAAQTHGISNKPKDKKKKKQEISKRTKLTNAHLPELFQN 278

[Close]

BLAST of CcUC07G135720 vs. TAIR 10
Match: AT4G21010.1 (Transcription initiation factor TFIIE, beta subunit )

HSP 1 Score: 294.3 bits (752), Expect = 1.0e-79
Identity = 168/280 (60.00%), Postives = 218/280 (77.86%), Query Frame = 0


Query: 1   MALQEQLDRFKKQQERCQTTLSGIAASKSASKSTPKFTPAPAVSIARPPAPAVKFSNDTE 60
           MAL+EQLD+F KQQE+CQ+TLS I++S++A   +  + PA A +  +P     KFS +T+
Sbjct: 1   MALREQLDKFNKQQEKCQSTLSSISSSRTALSRS--YVPA-ATTSQKPNVFRGKFSENTK 60

Query: 61  RLQHINSIRKSPVGAQIKRVIDLLLETRQAFTPEQINEACYVDINSNKAVYDSLRNNPKV 120
           +LQHI +IR S VGAQ+K VIDLL +TR A+T EQINEACYVD+++NKAV+DSLR NPKV
Sbjct: 61  QLQHITNIRNSAVGAQMKIVIDLLFKTRLAYTAEQINEACYVDMHNNKAVFDSLRKNPKV 120

Query: 121 HYDGRRFSYKSKHDLKDKSQLLYLIRKFPEGIAVIDLKDAYPSVMEDLQALKASGQV-WL 180
           HYDGRRFSYK+ H++KDK QLL  + K  + I V DLKDAYP+VMEDL++LK+SG++ WL
Sbjct: 121 HYDGRRFSYKATHNIKDKKQLLSFVNKSDKVIDVSDLKDAYPNVMEDLKSLKSSGEIFWL 180

Query: 181 LSNFDSQEDIAYPNDPRIQIKVDDDLKQLFRDIELPRDMLDVEKDLQKNGMKPATNTAKR 240
           LSN DS+E   Y N+     K+DD+LK LFRDI +P DML+VEK+L K G+KPATN A+R
Sbjct: 181 LSNTDSKEGTVYRNNMEYP-KIDDELKALFRDI-IPSDMLEVEKELLKIGLKPATNIAER 240

Query: 241 RANAQ-HVASSKPK-PKKKKQEISKRTKLTNAHLPELFKN 278
           RA  Q H  S+KPK  KKKK+EI+ RTKLTN+H+ ELF++
Sbjct: 241 RAAEQLHGVSNKPKDKKKKKKEITNRTKLTNSHMLELFQS 275

The following BLAST results are available for this feature:

BLAST of CcUC07G135720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653191.1	1.7e-145	97.83	general transcription factor IIE subunit 2 [Cucumis sativus] >KGN53349.1 hypothe...	[more]
XP_008452012.1	1.9e-144	97.83	PREDICTED: general transcription factor IIE subunit 2-like [Cucumis melo] >XP_00...	[more]
XP_038906431.1	4.0e-142	97.11	general transcription factor IIE subunit 2-like [Benincasa hispida]	[more]
XP_022984812.1	7.8e-138	93.86	general transcription factor IIE subunit 2-like [Cucurbita maxima]	[more]
XP_022931511.1	1.7e-137	93.50	general transcription factor IIE subunit 2-like [Cucurbita moschata] >XP_0235522...	[more]

BLAST of CcUC07G135720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KJ8	1.5e-14	26.47	General transcription factor IIE subunit 2 OS=Dictyostelium discoideum OX=44689 ...	[more]
P79011	2.4e-12	29.27	Transcription initiation factor IIE subunit beta OS=Schizosaccharomyces pombe (s...	[more]

BLAST of CcUC07G135720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KWU5	8.4e-146	97.83	Transcription initiation factor IIE subunit beta OS=Cucumis sativus OX=3659 GN=C...	[more]
A0A1S3BS95	9.3e-145	97.83	Transcription initiation factor IIE subunit beta OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A5A7TNR4	9.3e-145	97.83	Transcription initiation factor IIE subunit beta OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1J372	3.8e-138	93.86	Transcription initiation factor IIE subunit beta OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1ETU7	8.5e-138	93.50	Transcription initiation factor IIE subunit beta OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of CcUC07G135720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G20330.1	4.5e-99	69.29	Transcription initiation factor TFIIE, beta subunit	[more]
AT4G21010.1	1.0e-79	60.00	Transcription initiation factor TFIIE, beta subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR040501	TFA2, Winged helix domain 2	PFAM	PF18121	TFA2_Winged_2	coord: 136..193 e-value: 5.8E-14 score: 51.5
IPR016656	Transcription initiation factor TFIIE, beta subunit	PIRSF	PIRSF016398	TFIIE-beta	coord: 1..277 e-value: 7.7E-25 score: 85.0
IPR016656	Transcription initiation factor TFIIE, beta subunit	PANTHER	PTHR12716	TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT	coord: 1..277
IPR003166	Transcription factor TFIIE beta subunit, DNA-binding domain	PFAM	PF02186	TFIIE_beta	coord: 75..134 e-value: 2.4E-9 score: 37.4
IPR003166	Transcription factor TFIIE beta subunit, DNA-binding domain	PROSITE	PS51351	TFIIE_BETA_C	coord: 61..136 score: 10.965059
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..277
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..243
None	No IPR available	PANTHER	PTHR12716:SF13	BNAA02G21830D PROTEIN	coord: 1..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G135720.1	CcUC07G135720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006367	transcription initiation from RNA polymerase II promoter
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005673	transcription factor TFIIE complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003743	translation initiation factor activity