CcUC07G135640 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G135640
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Location	CicolChr07: 18348939 .. 18353642 (+)
RNA-Seq Expression	CcUC07G135640
Synteny	CcUC07G135640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCATAAAGAAGCGATAGCATGTTATTGTAATTTGGACCCCGCATGACACCCTCCCTACGCGCCAACGACACAATTCAACCACAAACAAACCTCCGCTCGCACTCACCTCTTCTTCCTTTGCCCCTTTCCATGGCAGTCTCCGCCCCCTTCTTCGCCTCTCCCACCGCCGCCACAACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAAATTCCACTGCTGTTTCCTCCTCTTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGCCGACTACCGCCGTCAAACCCGATTCTCCTTCCAAAACCTTGCCGTTTCGGGTCGGACATGGCTTCGATCTTCACAGGTTGGAGCCTGGGTACCCTTTGATTATTGGGGGAATTAGTATTCCCCATGATAGAGGCTGCGAGGCTCATTCCGATGGTAATTTCTTTGGTTTCTCCTTTTTGTCTTTTTCTCTGTTGCTTTGCTGCTGATGAAATAGGGAAATTATTGCCTACTTAATTGTGGGTGTTTTAGTTCTTTGAATAATTAGCTCAGTTTTGTTGTTGGCTGATTATCCTGTCAATTTTAGATTGCATATTGCTGTTTTAGGGTGTAATTGGCTGCTGTTGATTGCCCTACTGACGAGATTAGTACTTTTTTGCTTACTGAAAATTTTATGGATTAATCATAGAGAACTATATATAAAAAGCCATGGGAGGTTTTGTCCTAGTGGTAGTGATAGAACTTGGATTTTACTGTTATTATTGTCTACTATTACTCTAGTGTTTTTGTACCTTTTGAACATTGGAGTGTTGGAGATCAGCTTATTTAAGCCCAGTTATCTGCAATTGATCTATTGAATGGAGCTTCCATCTCATCAAGCTTTTTAGAAGTCTCAACTTTGTTTTCTGTCTCTGTGATAAAAGTTTCCTGCAACTCTGTTAGACCTCCGATTATACACACTTATAAGAGGAGGGGTATGAAAGGAAATATACAAGGGGAGAGGGGAGAGGTAGCACGTGGAGTTAGTTAGGAATGGAGGGGACCAAAAGAAATACTTGAAAAGGGAGGAAAGGATCATGAGGGAGGATATCAGAATTCTTAATGAGGAAATTATCCTTGAGGGAGAGAACTCCAGCTCTCTTGAATGTGCTGCTGGTTATCGTGCTGTTAGCTTGGAATCTTATTGTATTTCTTGCTACCATCTTTGTTATCATAAATAAATATATTGCTTGGATTCTTTGTTCTGTTTCCTGCTGCTTGTTCGGTATTTTTCTGAGTGCAGGGTTTGGATACCTAACAAACTGTTGTTAAATTTTTAAGTGTTTCTTTCTTTTGTTGATTTAGGGGATGTTCTACTACACTGTGTGGTTGATGCAATTTTGGGTGCTTTGGGGCTTCCTGATATTGGACAGATCTTTCCAGATTCAGACCCCAAATGGAAGGGTGCTCCATCATCCGTATTCATGAAAGAAGCTGTAAGTAGTTATGGCGTAGCAAATTCGTATGCACTTACCAAGATTTGTTATCTTTCATATATGAATCATGTCCTCTTTGACTTATTTAAAATGAGCCACATGGTGCACTGTACGGATGATCTAGGATTCTGTTGTTGCTTTCATACGGGATGTCATGAACTCATGATATCTTGTAATGCTTGCTTGCTTGTTCTGTTCTCTTTAGAGGGGCCCTCAGTAGCGTAGTGGATGAACCAAATCACATATCTCTTTCTCAAGTTTTCTCAATTTTATTGGTTTCTTCGATACGTATATGTTATGTCACATAAGAGTTCTATTATCTTTATTCAATAAATTTTATGAGGGTCATGTCAAATATCGAGTTTTTACTCAGGACCGAATTAGTGGTTATATCAAAGTTTAAGCATCTCAATAAATTTAGTCAGCATGAATGTTCATTGTATCAATGAAAGAAATGTCAAAGTCTACTAAGTGGACCTTATATATAGTTTCTCTTTCTCATAATCCACTTCAATTATATTGCCTGACTGGCCTGACCGTACACTTGCTTATTTGTTCAAACCCTTTTGTACCATTATAACATTTTATGTTTCCTCTGTATAGCTACATCTTCTAATTACTTAGAGAGAATAGGATCGTGCAACAAGTCATATACCTGCATGAAATGATGTTGTTTCGGGTGGGGATTTTAAGAATGTATGGAGTAAAGAATGAGCATCAGTTTATAGCGATCTTTCAACTCAGTTATATTAAATATCTTTCACTTGTATTAAGAAACAAAGACTCTTGTCGAGACAAAGGAAGCAATACACAAACAGAGGAGCATAAGAAGCTCTCCAAAACCAAAAGGAACTGCAGAAAGGTCTTCCAATTCACGTGTATCAAAGGAGAAGAAAAGCGGTTAATCTTATATCTTGGGTTTCCCTTTTACTTCTCCCCTTTGAAAATACATATGTTTCTTTGTACAACAATCCTCACCAAACATCATACACCAAAGGAATCCAAAGAAGCTTTTGTCTTCCTGTTGAAACTTCCACCCAACAACCATTTGTGTAAAAGAATCTTGGATATCATCTTGAGGACTCCATATGCAATTAAAACTATTAAAACTATTGAAAGAGAAAAAACAATCATTTACATGAATGGGGCTCCTGAATCCCCGGGTCTGGGGATCTCTAGGAAGCATGATGTTGTTCCGTTATCTTATGAGTTTCAAAATTCTCCAATGAGAATAAGGCTTGTTGAAGATTATTGCCACTAAACTTGAATACGGTTTCACCTGCCATTTCAGGTGCATCTTGGAGTGCGCTACTTTATTTTTTTCTATCTTATGAAACATTTTAATGCTTCTTATAAGGATCTCATGTAATATTTAGATTGAGAGGAATTAAAGAACTTTTAGAGGGGTTGAGATTTGTACTAGAACTGTGGGCTAGCCGCGGTTCACTCTCAAAAAATTTTTAAGAGGATGCATGGAATAATTTAGATCGTATACCGGTGCTAAGGGACTCCAATCTAACAAAATAAGCCAAACTAAATAATTTAAATTGCAAAATCCTTATAAACTGAAAGCTCAAAGATGTGTGGAATCTAACAATGGACCAAACCACGGACTAAACCTCTTCTCAAGAAGTCTTTGACCTCCCAGCAAATGTCATAACAAAAAGATACATAAAATTAGACAAGTTCTGGATTCATATTATAGCATATTCTGACCTTAGAGATGGATGCTTCAACCAGCGTGTCCTTGCTTCCTAGATTGTCCTTTAACTCACAAATGCTAGGATAAGTGACTCGATCTACTGGTGCTTTTTTGCAAATGCTCAGAGAAGGTACGGAGCCAGTATTATATGGCCATGGTGTAACTTGTAGATATCATTAATTTTAAATTAAATACAATTTACAACTTACATCAACTTAAGTTTTCCAACTTTAGGTTTCATAAATTCAGGCTCATTAATCGTGAGGTAAACACAACTACCGTAGTTTGGCCTAGTGGTCATTGGTCAATAAGAAACAATATAAGTAATTAAGAATTAAGCGGGAATGGGTTCAAGTCATAATGATCATCTATTTTTGGAGCATGTCCTACAAATTACCTAAGCAACTAAATGTAGTAGGATGGTGTTGGGATTCTTCCTAACAAGAACAAGATCCAAAATATATTGAAATATAGAGAAACTATTACAAGATAATCCAAGTATAGAGGAACTTGTAACTTCCCTCTTGAGTGTACTCACCCAAGCCCTAGATCACTCACAGAATAACCTACTCTTCACTCACTTACCCTCCTATTTGCGCAGTAACTAGCTTTATACAATAACTACTCTTATTCAGTAACTACCTATCTACCGCTCACTAACAACATACTAAACATCTGGTACCTAACAAATGGGTTATGGTAAACTTCTCGCGTTTTCTTAAATATCAACTCGAGGTCGAACACATGGGACAATTATGTAAAATGAGAAGAGAATAACATTATAGGGTAGGGGGTATGAACTTTGCAGCAGTGTCTTTAATATTTAAAAAGTGACGCTGATAGGTAGGTTGGTGTACATTTATCTTTTCAACATGTGGTTAGTCAACAAACCAGCCTAACGGCTAAATCTGAATCCCTATATGACAGAGACAATATGCCTCTCCCCCGAATATCTGAGACAAGTGAATCCATTTAGCTAACCGAAGTCGAATTAAATAAGGCAAGTGAATCCATTTAGCTAACCAAAGTCGAATTAAATAGTTTGCATTCAGTGCATTTTAAATAAAAGTTCCATTATAATTAGTGAGATGAAATCTTTGCTGTTATTTTTGGTTGATTCCAGGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTAATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACACATGAGAAAGTTGACAGCCTCGGAGAAAACAGAAGTATTGCTGCTCATACTGTGGTCCTCTTGATGAGGAGATAGAAGCCCTGCCCTCCCTCCCATTAGTGCTGCTGTACAAGTGTAATAACAACAGTGTACTCATTTAAGTGGAATATGCTATATTGTCAATACTTTGAATTTTCCCCCATTCCCTCCACACTTCCCCGCGAAGTGCAAACGATTGTAAGT

mRNA sequence

GTCATAAAGAAGCGATAGCATGTTATTGTAATTTGGACCCCGCATGACACCCTCCCTACGCGCCAACGACACAATTCAACCACAAACAAACCTCCGCTCGCACTCACCTCTTCTTCCTTTGCCCCTTTCCATGGCAGTCTCCGCCCCCTTCTTCGCCTCTCCCACCGCCGCCACAACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAAATTCCACTGCTGTTTCCTCCTCTTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGCCGACTACCGCCGTCAAACCCGATTCTCCTTCCAAAACCTTGCCGTTTCGGGTCGGACATGGCTTCGATCTTCACAGGTTGGAGCCTGGGTACCCTTTGATTATTGGGGGAATTAGTATTCCCCATGATAGAGGCTGCGAGGCTCATTCCGATGATTCAGACCCCAAATGGAAGGGTGCTCCATCATCCGTATTCATGAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTAATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACACATGAGAAAGTTGACAGCCTCGGAGAAAACAGAAGTATTGCTGCTCATACTGTGGTCCTCTTGATGAGGAGATAGAAGCCCTGCCCTCCCTCCCATTAGTGCTGCTGTACAAGTGTAATAACAACAGTGTACTCATTTAAGTGGAATATGCTATATTGTCAATACTTTGAATTTTCCCCCATTCCCTCCACACTTCCCCGCGAAGTGCAAACGATTGTAAGT

Coding sequence (CDS)

ATGACACCCTCCCTACGCGCCAACGACACAATTCAACCACAAACAAACCTCCGCTCGCACTCACCTCTTCTTCCTTTGCCCCTTTCCATGGCAGTCTCCGCCCCCTTCTTCGCCTCTCCCACCGCCGCCACAACCTCCCACCAATCCCCTTCTCTTTCTTTCTATCCTCCTTCCTTTCCCAGAAGAAATTCCACTGCTGTTTCCTCCTCTTCTTCTCTACCTTCCTTCCGTCTCAATTCCGCCGCTTCTCCCTCTGTGGCGCCGACTACCGCCGTCAAACCCGATTCTCCTTCCAAAACCTTGCCGTTTCGGGTCGGACATGGCTTCGATCTTCACAGGTTGGAGCCTGGGTACCCTTTGATTATTGGGGGAATTAGTATTCCCCATGATAGAGGCTGCGAGGCTCATTCCGATGATTCAGACCCCAAATGGAAGGGTGCTCCATCATCCGTATTCATGAAAGAAGCTGTGAGACTGATGCATGAGGCAGGTTATGACATAGGCAACTTGGATGCCACATTAATACTTCAAAGACCAAAGCTTAGCCCTCACAAGGAAGCTATCAGAGCAAACCTCTCTGAGCTCCTGGGAGCCGACCCCTCTGTCGTGAATCTGAAGGCGAAAACACATGAGAAAGTTGACAGCCTCGGAGAAAACAGAAGTATTGCTGCTCATACTGTGGTCCTCTTGATGAGGAGATAG

Protein sequence

MTPSLRANDTIQPQTNLRSHSPLLPLPLSMAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPTTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR

Homology

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BLAST of CcUC07G135640 vs. NCBI nr
Match: XP_038877996.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Benincasa hispida])

HSP 1 Score: 363.2 bits (931), Expect = 1.6e-96
Identity = 196/230 (85.22%), Postives = 197/230 (85.65%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAV-SSSSSLPSFRLNSAASPSVAP 89
           MAVSAPFFASPTAATTSHQS SLSFYPPSF RRN TAV SSSSSLPSFR+ SAASPSVAP
Sbjct: 1   MAVSAPFFASPTAATTSHQSLSLSFYPPSFLRRNFTAVSSSSSSLPSFRVKSAASPSVAP 60

Query: 90  TTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD---------- 149
           TTAVK DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD          
Sbjct: 61  TTAVKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVD 120

Query: 150 ----------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLS 209
                           DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLS
Sbjct: 121 AILGALGLPDIGQIFPDSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLS 180

Query: 210 PHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR 233
           PHKEAIRANLSELLG DPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR
Sbjct: 181 PHKEAIRANLSELLGVDPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR 230

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BLAST of CcUC07G135640 vs. NCBI nr
Match: XP_008452007.1 (PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis melo] >TYK16619.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Cucumis melo var. makuwa])

HSP 1 Score: 359.8 bits (922), Expect = 1.8e-95
Identity = 190/230 (82.61%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPT 89
           MAVSAPFFASP AATTSHQSPSLSFYPPSFPRR  T +SSSSSLPSFR+NSA S SV+ T
Sbjct: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST 60

Query: 90  TAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD----------- 149
           TA++ DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD           
Sbjct: 61  TAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDA 120

Query: 150 ---------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSP 209
                          DSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSP
Sbjct: 121 ILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSP 180

Query: 210 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 230

[Close]

BLAST of CcUC07G135640 vs. NCBI nr
Match: XP_004146533.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis sativus] >KGN53354.1 hypothetical protein Csa_014871 [Cucumis sativus])

HSP 1 Score: 339.3 bits (869), Expect = 2.5e-89
Identity = 184/233 (78.97%), Postives = 190/233 (81.55%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNST---AVSSSSSLPSFRLNSAASPSV 89
           MA+SAP FASP AATTSHQS SLS YPPSFP    T   + SSSSSLPSFR+NSAAS SV
Sbjct: 1   MALSAPLFASPAAATTSHQSLSLSLYPPSFPTTKFTPLSSFSSSSSLPSFRVNSAASHSV 60

Query: 90  APTTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD-------- 149
           + TTA+K DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD        
Sbjct: 61  SSTTAIKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV 120

Query: 150 ------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPK 209
                             DSDPKWKGA SSVF+KEAVRLMHEAGYDIGNLDATLILQRPK
Sbjct: 121 VDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMHEAGYDIGNLDATLILQRPK 180

Query: 210 LSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           LSPHKEAIRA LSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 LSPHKEAIRAKLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 233

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BLAST of CcUC07G135640 vs. NCBI nr
Match: KAG6600551.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031190.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.6 bits (823), Expect = 5.5e-84
Identity = 177/236 (75.00%), Postives = 182/236 (77.12%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPT 89
           MAV  P FAS T ATTSHQS SLS YP SFPR N   VSSSSS PS R+NSAASPSV   
Sbjct: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60

Query: 90  TAV------KPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD----- 149
           TAV        DS SK LPFR+GHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSD     
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 150 ---------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQ 209
                                DSDPKWKGAPSSVF+KEAVRLMHEAGY+IGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 210 RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           RPKLSPHKEAIRANLS LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSNLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]

BLAST of CcUC07G135640 vs. NCBI nr
Match: XP_023548820.1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 7.2e-84
Identity = 176/236 (74.58%), Postives = 183/236 (77.54%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPT 89
           MAV  P FAS T ATTSHQS SLS YP SFPR N   VSSSSS PS R+NSAASPSV   
Sbjct: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60

Query: 90  TAV------KPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD----- 149
           TAV        DS SK LPFR+GHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSD     
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 150 ---------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQ 209
                                DSDPKWKGAPSSVF+KEAVRLMH+AGY+IGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHDAGYEIGNLDATLILQ 180

Query: 210 RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           RPKLSPHKEAIRANLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSDLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

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BLAST of CcUC07G135640 vs. ExPASy Swiss-Prot
Match: Q9CAK8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ISPF PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.1e-66
Identity = 129/180 (71.67%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 80  SAASPSVAPTTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD- 139
           SAAS +V    +V  + P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD 
Sbjct: 52  SAASSAVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDG 111

Query: 140 -------------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDAT 199
                                    DSDPKWKGA SSVF+KEAVRLM EAGY+IGNLDAT
Sbjct: 112 DVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDEAGYEIGNLDAT 171

Query: 200 LILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           LILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Sbjct: 172 LILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 231

[Close]

BLAST of CcUC07G135640 vs. ExPASy Swiss-Prot
Match: Q9M4W3 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=ISPF PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.8e-62
Identity = 143/239 (59.83%), Postives = 161/239 (67.36%), Query Frame = 0


Query: 30  MAVSAPFFAS---PTAATTSHQSPSL------SFYPPSFPRRNSTAVSSSSSLPSFRLNS 89
           MA++  F+ S   P+  T  ++   L      S   PS+ R  ST  S + SL      S
Sbjct: 1   MAMATSFYCSTAIPSKKTNQNRENFLCSPVGGSKTTPSYIRL-STRQSRTLSLVVSAAAS 60

Query: 90  AASPSVAPTTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD-- 149
            A+    P  A    +PSK L FRVGHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSD  
Sbjct: 61  GAAVEAEPKFAAV--TPSKILSFRVGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGD 120

Query: 150 ------------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATL 209
                                   D+DPKWKGAPSSVF+KEAVRLM EAGY++GNLDATL
Sbjct: 121 VLLHCVVDAILGALGLPDIGQIFPDTDPKWKGAPSSVFIKEAVRLMDEAGYELGNLDATL 180

Query: 210 ILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           ILQRPK+SPHKEAIR NL +LLGADP VVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 181 ILQRPKVSPHKEAIRQNLCQLLGADPCVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK 236

[Close]

BLAST of CcUC07G135640 vs. ExPASy Swiss-Prot
Match: Q6EPN6 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ISPF PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.7e-62
Identity = 135/227 (59.47%), Postives = 158/227 (69.60%), Query Frame = 0


Query: 33  SAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPTTAV 92
           S+ F ASP A   + ++ S    P + P R S  +   S+L +  + +   P+VA   A 
Sbjct: 5   SSLFLASPVATAPTARARST---PSASPARPSLRLRRPSTLAAAAVQAEHQPAVA--AAP 64

Query: 93  KPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD-------------- 152
           KP +    LPFRVGHGFDLHRLEPG PLIIGGI IPHDRGC+AHSD              
Sbjct: 65  KPPA----LPFRVGHGFDLHRLEPGLPLIIGGIDIPHDRGCDAHSDGDVLLHCVVDAILG 124

Query: 153 ------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKE 212
                       DSDP+WKGA SSVFM+EAV+LMHEAGY++GNLDATLILQ+PK+SP KE
Sbjct: 125 ALGLPDIGQIFPDSDPRWKGADSSVFMREAVKLMHEAGYELGNLDATLILQKPKISPFKE 184

Query: 213 AIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
            IR+NL +LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMR+
Sbjct: 185 TIRSNLCDLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRK 222

[Close]

BLAST of CcUC07G135640 vs. ExPASy Swiss-Prot
Match: Q1LLZ4 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34) OX=266264 GN=ispF PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.7e-30
Identity = 69/156 (44.23%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 104 RVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD------------------------- 163
           R+G G+D+H L PG  LI+GG+ IPHDRG   HSD                         
Sbjct: 7   RIGQGYDVHALVPGRKLILGGVDIPHDRGLLGHSDADALLHAVTDALFGAAALGDIGRHF 66

Query: 164 -DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG 223
            D+DP + GA S V ++EAVR + EAGY+IGN+DAT+I Q+PKL+PH   + ANL+E LG
Sbjct: 67  PDTDPNFAGADSRVLLREAVRRVREAGYEIGNVDATVIAQKPKLAPHISGMVANLAEDLG 126

Query: 224 ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
              +  N+KAKT+EK+   G+   I A   VL+ RR
Sbjct: 127 LPVTRCNVKAKTNEKLGFEGKEEGIVAQAAVLIYRR 162

[Close]

BLAST of CcUC07G135640 vs. ExPASy Swiss-Prot
Match: C1D559 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Laribacter hongkongensis (strain HLHK9) OX=557598 GN=ispF PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.9e-29
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = 0


Query: 104 RVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD------------------------- 163
           R+G G+D+HRL  G PL++GG++IP D+G + HSD                         
Sbjct: 4   RIGQGWDVHRLVEGRPLVLGGVTIPFDKGLDGHSDADALCHAITDALFGAAALGDIGRHF 63

Query: 164 -DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSPHKEAIRANLSELLG 223
            D+D ++KGA S V ++EAVR + EAG+DI N+D+T+I Q P+L+P+ EA+R++L+  LG
Sbjct: 64  PDTDLEFKGADSRVLLREAVRRVREAGFDIVNVDSTVIAQAPRLAPYVEAMRSHLAADLG 123

Query: 224 ADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
             P  VN+KAKT E++  LG    IAA  V LL  R
Sbjct: 124 LSPDRVNVKAKTSERLGHLGRGEGIAADAVCLLQSR 159

[Close]

BLAST of CcUC07G135640 vs. ExPASy TrEMBL
Match: A0A5D3D287 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004470 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.8e-96
Identity = 190/230 (82.61%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPT 89
           MAVSAPFFASP AATTSHQSPSLSFYPPSFPRR  T +SSSSSLPSFR+NSA S SV+ T
Sbjct: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST 60

Query: 90  TAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD----------- 149
           TA++ DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD           
Sbjct: 61  TAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDA 120

Query: 150 ---------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSP 209
                          DSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSP
Sbjct: 121 ILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSP 180

Query: 210 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 230

[Close]

BLAST of CcUC07G135640 vs. ExPASy TrEMBL
Match: A0A1S3BTZ8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo OX=3656 GN=LOC103493142 PE=3 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 8.8e-96
Identity = 190/230 (82.61%), Postives = 196/230 (85.22%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPT 89
           MAVSAPFFASP AATTSHQSPSLSFYPPSFPRR  T +SSSSSLPSFR+NSA S SV+ T
Sbjct: 1   MAVSAPFFASPPAATTSHQSPSLSFYPPSFPRRIFTPLSSSSSLPSFRVNSAVSHSVSST 60

Query: 90  TAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD----------- 149
           TA++ DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD           
Sbjct: 61  TAIESDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCVVDA 120

Query: 150 ---------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKLSP 209
                          DSDPKWKGAPSSVF+KEAVRLMHEAGYDIGNLDATLILQRPKLSP
Sbjct: 121 ILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYDIGNLDATLILQRPKLSP 180

Query: 210 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 HKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 230

[Close]

BLAST of CcUC07G135640 vs. ExPASy TrEMBL
Match: A0A0A0KWV1 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis sativus OX=3659 GN=Csa_4G049620 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 184/233 (78.97%), Postives = 190/233 (81.55%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNST---AVSSSSSLPSFRLNSAASPSV 89
           MA+SAP FASP AATTSHQS SLS YPPSFP    T   + SSSSSLPSFR+NSAAS SV
Sbjct: 1   MALSAPLFASPAAATTSHQSLSLSLYPPSFPTTKFTPLSSFSSSSSLPSFRVNSAASHSV 60

Query: 90  APTTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD-------- 149
           + TTA+K DSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD        
Sbjct: 61  SSTTAIKSDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSDGDVLLHCV 120

Query: 150 ------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPK 209
                             DSDPKWKGA SSVF+KEAVRLMHEAGYDIGNLDATLILQRPK
Sbjct: 121 VDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMHEAGYDIGNLDATLILQRPK 180

Query: 210 LSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           LSPHKEAIRA LSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 LSPHKEAIRAKLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 233

[Close]

BLAST of CcUC07G135640 vs. ExPASy TrEMBL
Match: A0A6J1FX89 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita moschata OX=3662 GN=LOC111447862 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.3e-83
Identity = 176/236 (74.58%), Postives = 182/236 (77.12%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPT 89
           MAV  P FAS T ATTSHQS SLS YP SFPR N   VSSSSS PS R+NSAASPSV   
Sbjct: 1   MAVPFPVFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVEAA 60

Query: 90  TAV------KPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD----- 149
           TAV        DS SK LPFR+GHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSD     
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 150 ---------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQ 209
                                DSDPKWKGAPSSVF+KEAVRLMHEAGY+IGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 210 RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           RPKLSPHKEAIRANLS+LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSDLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]

BLAST of CcUC07G135640 vs. ExPASy TrEMBL
Match: A0A6J1J2X8 (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita maxima OX=3661 GN=LOC111481338 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.2e-83
Identity = 176/236 (74.58%), Postives = 181/236 (76.69%), Query Frame = 0


Query: 30  MAVSAPFFASPTAATTSHQSPSLSFYPPSFPRRNSTAVSSSSSLPSFRLNSAASPSVAPT 89
           MAV  P FAS T ATTSHQS SLS YP SFPR N   VSSSSS PS R+NSAASPSV   
Sbjct: 1   MAVPFPIFASATTATTSHQSLSLSVYPRSFPRTNFNVVSSSSSRPSIRVNSAASPSVDAA 60

Query: 90  TAV------KPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD----- 149
           TAV        DS SK LPFR+GHGFDLHRLEPGYPLIIGGI+IPHDRGCEAHSD     
Sbjct: 61  TAVDSDRAAASDSRSKALPFRIGHGFDLHRLEPGYPLIIGGINIPHDRGCEAHSDGDVLL 120

Query: 150 ---------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQ 209
                                DSDPKWKGAPSSVF+KEAVRLMHEAGY+IGNLDATLILQ
Sbjct: 121 HCVVDAILGALGLPDIGQIFPDSDPKWKGAPSSVFIKEAVRLMHEAGYEIGNLDATLILQ 180

Query: 210 RPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           RPKLSPHKEAIRANLS LLGAD SVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR
Sbjct: 181 RPKLSPHKEAIRANLSNLLGADQSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 236

[Close]

BLAST of CcUC07G135640 vs. TAIR 10
Match: AT1G63970.2 (isoprenoid F )

HSP 1 Score: 256.1 bits (653), Expect = 2.6e-68
Identity = 129/172 (75.00%), Postives = 142/172 (82.56%), Query Frame = 0


Query: 80  SAASPSVAPTTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD- 139
           SAAS +V    +V  + P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD 
Sbjct: 52  SAASSAVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDV 111

Query: 140 -----------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDATLILQRPKL 199
                            DSDPKWKGA SSVF+KEAVRLM EAGY+IGNLDATLILQRPK+
Sbjct: 112 DAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDEAGYEIGNLDATLILQRPKI 171

Query: 200 SPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Sbjct: 172 SPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 223

[Close]

BLAST of CcUC07G135640 vs. TAIR 10
Match: AT1G63970.1 (isoprenoid F )

HSP 1 Score: 253.1 bits (645), Expect = 2.2e-67
Identity = 129/180 (71.67%), Postives = 142/180 (78.89%), Query Frame = 0


Query: 80  SAASPSVAPTTAVKPDSPSKTLPFRVGHGFDLHRLEPGYPLIIGGISIPHDRGCEAHSD- 139
           SAAS +V    +V  + P+KTLPFR+GHGFDLHRLEPGYPLIIGGI IPHDRGCEAHSD 
Sbjct: 52  SAASSAVDVNESVTSEKPTKTLPFRIGHGFDLHRLEPGYPLIIGGIVIPHDRGCEAHSDG 111

Query: 140 -------------------------DSDPKWKGAPSSVFMKEAVRLMHEAGYDIGNLDAT 199
                                    DSDPKWKGA SSVF+KEAVRLM EAGY+IGNLDAT
Sbjct: 112 DVLLHCVVDAILGALGLPDIGQIFPDSDPKWKGAASSVFIKEAVRLMDEAGYEIGNLDAT 171

Query: 200 LILQRPKLSPHKEAIRANLSELLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVVLLMRR 234
           LILQRPK+SPHKE IR+NLS+LLGADPSVVNLKAKTHEKVDSLGENRSIAAHTV+LLM++
Sbjct: 172 LILQRPKISPHKETIRSNLSKLLGADPSVVNLKAKTHEKVDSLGENRSIAAHTVILLMKK 231

The following BLAST results are available for this feature:

BLAST of CcUC07G135640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877996.1	1.6e-96	85.22	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Benincasa ...	[more]
XP_008452007.1	1.8e-95	82.61	PREDICTED: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic ...	[more]
XP_004146533.1	2.5e-89	78.97	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic [Cucumis sa...	[more]
KAG6600551.1	5.5e-84	75.00	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic, partial [C...	[more]
XP_023548820.1	7.2e-84	74.58	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic-like [Cucur...	[more]

BLAST of CcUC07G135640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAK8	3.1e-66	71.67	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Arabidop...	[more]
Q9M4W3	2.8e-62	59.83	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Catharan...	[more]
Q6EPN6	4.7e-62	59.47	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, chloroplastic OS=Oryza sa...	[more]
Q1LLZ4	4.7e-30	44.23	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cupriavidus metallidura...	[more]
C1D559	8.9e-29	42.31	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Laribacter hongkongensi...	[more]

BLAST of CcUC07G135640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D287	8.8e-96	82.61	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo var. makuw...	[more]
A0A1S3BTZ8	8.8e-96	82.61	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KWV1	1.2e-89	78.97	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucumis sativus OX=3659...	[more]
A0A6J1FX89	1.3e-83	74.58	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita moschata OX=3...	[more]
A0A6J1J2X8	2.2e-83	74.58	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase OS=Cucurbita maxima OX=366...	[more]

BLAST of CcUC07G135640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63970.2	2.6e-68	75.00	isoprenoid F	[more]
AT1G63970.1	2.2e-67	71.67	isoprenoid F	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003526	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	PFAM	PF02542	YgbB	coord: 139..230 e-value: 1.3E-25 score: 90.5 coord: 103..138 e-value: 2.3E-9 score: 37.7
IPR003526	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	PANTHER	PTHR43181	2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC	coord: 139..233
IPR003526	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	PANTHER	PTHR43181	2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTIC	coord: 51..138
IPR003526	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	CDD	cd00554	MECDP_synthase	coord: 104..230 e-value: 6.73811E-67 score: 201.519
IPR036571	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily	GENE3D	3.30.1330.50		coord: 140..233 e-value: 2.4E-33 score: 117.5
IPR036571	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily	GENE3D	3.30.1330.50		coord: 100..139 e-value: 4.0E-11 score: 45.1
IPR036571	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily	SUPERFAMILY	69765	IpsF-like	coord: 102..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..99
None	No IPR available	PANTHER	PTHR43181:SF2	2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE	coord: 139..233
None	No IPR available	PANTHER	PTHR43181:SF2	2-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE	coord: 51..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G135640.1	CcUC07G135640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016117	carotenoid biosynthetic process
biological_process	GO:0015995	chlorophyll biosynthetic process
biological_process	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process	GO:0016114	terpenoid biosynthetic process
molecular_function	GO:0008685	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
molecular_function	GO:0046872	metal ion binding