CcUC07G134980 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G134980
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr07: 13801655 .. 13802969 (-)
RNA-Seq ExpressionCcUC07G134980
SyntenyCcUC07G134980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGAAGAAGGGAGTGGCTCCAATGATCACATTGATCAGCCAAAAGCATTTTTTATTTTTCATAATATTCGACATGTTCTTCCTGATTATTGGGTCTCTAAATCTCAATTTTCTCTTTTTTTTTTTCATTTTTAAAGATTATTATAAGTTCAGGATTAATGTGTGTAGTTTTTACTTAACTATTTCAACTAACTATACATTTATTTTCTTCCTCTTGTTCTTCAGGCTATCCCTCCCATGAATGAAAATCCAATAGAACATTTGGATTCTACTTATCGACATGTTAGTGAATAATCTAAATTTATGTAATCAAAGTTTATTTTAGTTTATAATTTTCTTTAACTAAAAAAAATTGTGTTGTTGTCATGCAGGTGGTGAATGTGATTTTTACAAGTCTTTTGAATTTTTTGGGGCGATTAGGTGGCCTCTACATTAATTTAAGGGGTCAAGGCTACCTTCAAATTTATTCTCCTCGAGCTTTTTGGGATGTTGACTCATTTGGAGAAATGTTGCGTAAGTTCTCTATTTCATTTTCAAAAAAATTAGTCTTAAAAATAAATTCTAACTAACAACATCTTGGTTAGACTAGACTAATTAGAACTAATTGTTTAAAATTATTATACCTTGGAAACACTAATTGTTAATCTGGGAATCTTTGTGTTTTTTTTTTTTCCTTTAATATTTGTTTGTATTTCTCCTTACATCCTTTTTGTTGATTTTCTACTGTTTTGATTGAATAGATTAATTACATATTTATTTGGTTTATGGAATTAATGAATACAGGTGAGGTACTTAGTGATCAACGCAGGGTTCCACAAGAGAATGATGCAATTGTTTGGTATAGGACAAATTTACAATCTTTGTTTAATCGTTTTCCTCAAGAGCGTCGAATAATAGGTATTTATTTATATTATGTAATGATGAATTAAAGGGTTTCATTATTTTAGAACAGAACTAATAGCTCATTATAATTTTAAATCTCAATCACACTATTTCGACTTTAAAAGAAAATTAATTAAAACTAACTTAGTTCTTCTCAATGTCTACAGGTTGTTTACTCGATGACCATGATGGAAACAGACAAGAAATTAACATTCATGACTTTCTGAGATTTTTGGTTCATCCTAATGAAAATTTAATATTTGTGGTAAGTGTATATACACATATGACTTGAAATAAACATTATCTTTTCTTCCAGTAAAGTTTATGATTAAATCTTGTTTTCTATTTATTCGATTTAGGTTGGTAACTTTAGAAACTATAGAGCGCTTGAGGAAGAGATTGATCAATATGTCAAAGGTACCAAATTATTTTAA

mRNA sequence

TGGAAGAAGGGAGTGGCTCCAATGATCACATTGATCAGCCAAAAGCATTTTTTATTTTTCATAATATTCGACATGTTCTTCCTGATTATTGGGCTATCCCTCCCATGAATGAAAATCCAATAGAACATTTGGATTCTACTTATCGACATGTGGTGAATGTGATTTTTACAAGTCTTTTGAATTTTTTGGGGCGATTAGGTGGCCTCTACATTAATTTAAGGGGTCAAGGCTACCTTCAAATTTATTCTCCTCGAGCTTTTTGGGATGTTGACTCATTTGGAGAAATGTTGCGTGAGGTACTTAGTGATCAACGCAGGGTTCCACAAGAGAATGATGCAATTGTTTGGTATAGGACAAATTTACAATCTTTGTTTAATCGTTTTCCTCAAGAGCGTCGAATAATAGGTTGTTTACTCGATGACCATGATGGAAACAGACAAGAAATTAACATTCATGACTTTCTGAGATTTTTGGTTCATCCTAATGAAAATTTAATATTTGTGGTTGGTAACTTTAGAAACTATAGAGCGCTTGAGGAAGAGATTGATCAATATGTCAAAGGTACCAAATTATTTTAA

Coding sequence (CDS)

ATGAATGAAAATCCAATAGAACATTTGGATTCTACTTATCGACATGTGGTGAATGTGATTTTTACAAGTCTTTTGAATTTTTTGGGGCGATTAGGTGGCCTCTACATTAATTTAAGGGGTCAAGGCTACCTTCAAATTTATTCTCCTCGAGCTTTTTGGGATGTTGACTCATTTGGAGAAATGTTGCGTGAGGTACTTAGTGATCAACGCAGGGTTCCACAAGAGAATGATGCAATTGTTTGGTATAGGACAAATTTACAATCTTTGTTTAATCGTTTTCCTCAAGAGCGTCGAATAATAGGTTGTTTACTCGATGACCATGATGGAAACAGACAAGAAATTAACATTCATGACTTTCTGAGATTTTTGGTTCATCCTAATGAAAATTTAATATTTGTGGTTGGTAACTTTAGAAACTATAGAGCGCTTGAGGAAGAGATTGATCAATATGTCAAAGGTACCAAATTATTTTAA

Protein sequence

MNENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFGEMLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFLRFLVHPNENLIFVVGNFRNYRALEEEIDQYVKGTKLF
Homology
BLAST of CcUC07G134980 vs. NCBI nr
Match: XP_022942054.1 (uncharacterized protein LOC111447242 [Cucurbita moschata])

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72
Identity = 132/152 (86.84%), Postives = 143/152 (94.08%), Query Frame = 0

Query: 1   MNENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFGE 60
           MN+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSF E
Sbjct: 36  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFRE 95

Query: 61  MLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFL 120
           MLREVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI IHDFL
Sbjct: 96  MLREVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFL 155

Query: 121 RFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 153
           RFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 156 RFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CcUC07G134980 vs. NCBI nr
Match: KAG6600811.1 (hypothetical protein SDJN03_06044, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282.7 bits (722), Expect = 1.9e-72
Identity = 132/152 (86.84%), Postives = 143/152 (94.08%), Query Frame = 0

Query: 1   MNENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFGE 60
           MN+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSF E
Sbjct: 36  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFRE 95

Query: 61  MLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFL 120
           MLREVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI IHDFL
Sbjct: 96  MLREVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFL 155

Query: 121 RFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 153
           RFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 156 RFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CcUC07G134980 vs. NCBI nr
Match: XP_022989850.1 (uncharacterized protein LOC111486913 [Cucurbita maxima])

HSP 1 Score: 276.2 bits (705), Expect = 1.8e-70
Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 0

Query: 1   MNENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFGE 60
           MN+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINL GQGYLQIYSPRAFWDVDSF E
Sbjct: 36  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFRE 95

Query: 61  MLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFL 120
           MLREVLSDQ RV QENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI IHDFL
Sbjct: 96  MLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFL 155

Query: 121 RFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 153
           RFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 156 RFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CcUC07G134980 vs. NCBI nr
Match: KAG7031448.1 (hypothetical protein SDJN02_05488 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 159.5 bits (402), Expect = 2.4e-35
Identity = 73/89 (82.02%), Postives = 81/89 (91.01%), Query Frame = 0

Query: 64  EVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFLRFL 123
           EVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI IHDFLRFL
Sbjct: 5   EVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFLRFL 64

Query: 124 VHPNENLIFVVGNFRNYRALEEEIDQYVK 153
           VHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 65  VHPNENLVFVVGDFRNYRVLEEEIDQYVK 93

BLAST of CcUC07G134980 vs. ExPASy TrEMBL
Match: A0A6J1FQ78 (uncharacterized protein LOC111447242 OS=Cucurbita moschata OX=3662 GN=LOC111447242 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 9.2e-73
Identity = 132/152 (86.84%), Postives = 143/152 (94.08%), Query Frame = 0

Query: 1   MNENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFGE 60
           MN+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSF E
Sbjct: 36  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFRE 95

Query: 61  MLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFL 120
           MLREVLSDQ RVPQENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI IHDFL
Sbjct: 96  MLREVLSDQHRVPQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFL 155

Query: 121 RFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 153
           RFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 156 RFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CcUC07G134980 vs. ExPASy TrEMBL
Match: A0A6J1JNI2 (uncharacterized protein LOC111486913 OS=Cucurbita maxima OX=3661 GN=LOC111486913 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 8.6e-71
Identity = 130/152 (85.53%), Postives = 141/152 (92.76%), Query Frame = 0

Query: 1   MNENPIEHLDSTYRHVVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFGE 60
           MN+NP+EHLDSTYRHVV+VIFTSLLNFLGRLGGLYINL GQGYLQIYSPRAFWDVDSF E
Sbjct: 36  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFRE 95

Query: 61  MLREVLSDQRRVPQENDAIVWYRTNLQSLFNRFPQERRIIGCLLDDHDGNRQEINIHDFL 120
           MLREVLSDQ RV QENDAI+W+ TNLQSLF+  PQERR+IGCLL+D  GN+QEI IHDFL
Sbjct: 96  MLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFL 155

Query: 121 RFLVHPNENLIFVVGNFRNYRALEEEIDQYVK 153
           RFLVHPNENL+FVVG+FRNYR LEEEIDQYVK
Sbjct: 156 RFLVHPNENLVFVVGDFRNYRVLEEEIDQYVK 187

BLAST of CcUC07G134980 vs. ExPASy TrEMBL
Match: A0A0A0KJD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G056070 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.7e-37
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 0

Query: 16  VVNVIFTSLLNFLGRLGGLYINLRGQGYLQIYSPRAFWDVDSFGEMLREVLSDQRRVPQE 75
           VV+VIFTSLLNFLGRLGGLYINLRGQGYLQI+SPRAFW+VDSF EMLREVLSDQ RVPQE
Sbjct: 3   VVDVIFTSLLNFLGRLGGLYINLRGQGYLQIHSPRAFWNVDSFREMLREVLSDQHRVPQE 62

Query: 76  NDAIVWYRTNLQSLFNRFPQERRIIGCLL 105
           NDAIVW+RTNLQ+LFN FP+ERRIIG LL
Sbjct: 63  NDAIVWHRTNLQALFNHFPRERRIIGTLL 91

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022942054.11.9e-7286.84uncharacterized protein LOC111447242 [Cucurbita moschata][more]
KAG6600811.11.9e-7286.84hypothetical protein SDJN03_06044, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022989850.11.8e-7085.53uncharacterized protein LOC111486913 [Cucurbita maxima][more]
KAG7031448.12.4e-3582.02hypothetical protein SDJN02_05488 [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1FQ789.2e-7386.84uncharacterized protein LOC111447242 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
A0A6J1JNI28.6e-7185.53uncharacterized protein LOC111486913 OS=Cucurbita maxima OX=3661 GN=LOC111486913... [more]
A0A0A0KJD03.7e-3788.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G056070 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G134980.1CcUC07G134980.1mRNA