CcUC07G134840 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G134840
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRibosomal protein S10
LocationCicolChr07: 12372750 .. 12376132 (-)
RNA-Seq ExpressionCcUC07G134840
SyntenyCcUC07G134840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTAAACATACTAAATCCATTATAGCGGCTTTAGGGATCATCGCCTTGAACAATGAGTTATACATTTGTACGTTCTCTTATAGATATAGCATAGTAATTGAAGTCTCATTCATCTTATTATTATTCACCATATGGAATAAACAAGTGCTGACGAACATCACCTTTCGCAGGGTTATGTGGAGTGTGAATCAACAGGGTTCCTGTTCCCCAAACATTGGCTGGATCCTAATACTACGTGCTCCTCCCTCCTTTTTATCAAATAGAATGGTTATGGAACCTATGGATGTTTTTATCACTTGGATTTCTCTTGAATAACCTTTCGCAAAAATGCTCATGGATGCATAATTATGAGACTCAATATTTTGACTGCTAATTTTTATTTATATAAGCCGTTTTCTTTCACTCATATAACTATCTGATTTAGTTCATTAATCCAAATAATTAATATAAAAATGAAGATATCTATTCAATTCATTTCACTCCTTTTCTCGAAAAAAAGTGGGAGAAGTTTATGTCTCAACGAATCACATGTAGAGATATTGATAATACACATAGAGTTAATGGTATTTCATAACTAATTGATTGAGCAGCAGCTCGTAGACCACCTAAAAAGGAATATTTATTATTGGATCCATATCCTGACATAAGAAGTCCGATAGGAGCAACACTTGAAATGGCAATCCATAAAAAAACACCGATATGGAGATCAGCTAAAACAAGGCGATAACCAAAAGAAAAACTAATTCATCTTAACATAACGTAATAGCGTAAGAAGTTCATCATTAAATAATAGTATAATGCACATGTTAGGAAAAAGCACTCATTGTCAGCATTATAGTATCACCCATTGTTCCATATGCTCTTAAATAGTATCTTACTACATCACCTAAGCATTTGGCAACCTAACAATGAATTAGCTATTCTTGCAAACTATAGAGAACGTACAGTTTGCTTAGGGGGTGAACAGCAAACACGATCGCTACTTACTCAATGTTTATCAAATAGAATGAATTCGGTAAGGCTCGGCAATGGTCAGATCAATCATAGAACAAGCGATTGTACACCTTTGTACATTCTCTTATAGATATAGCATAGTAATTGAAGTCTCATTCATCTTATTATTATTCACCATATGGAATAAACTAGTGGGAAGAATTTATTTTTTCACTTATTCTTCAACCAAGCCTTGTTCATTCGATCAAAAATATCCAGGTCCCATATGGTTCAGCTTTCTCTCATGGTATGGGATATAGCTCAGTTGGTAGAGCTTCGCTCTTGCAATTGGGTCGTTGCGATTACGGGTTAGATGTCTAATTGTCCAGGCGGTAATGATAGTATCTTGTACCTGAACCGGTGGCTCACTTTTTCTAAGTAATGTGGAAGAGGACTGAAACATGCCACTGAAAGACTCTACTGAGACAAAGATGGGCTGTCAAGAACGTAGAGGAGGTAGGATGGGCAGTTGGTCAGATCTAGTATGGATCGTACATGGACGGTAGTTGGAGTCGGCGGCTCTCTTAGGGTTCCCTCATCTGGGATCCCTGGGGAAGAAGATCAAGTTGGCCCTTGCGAACAGCTTGATGCACTATCTCCCTTCAACCCTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATCCATGGACCGACCCCATCGTCTCCACCCCGTACGAACTACGAGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCCTGTTCAATAAGTGGAACGCATTAGCTGTCCGCTTTCCGGTTGGGCAGTAAGGGTCGGAGAAGGGCAATCACTCATTCTTAAAACCAGCATTCTTAAGACCAAAGAGGCGGGCGGAAAAGGGGGCAAAGCTCTCCGTTCCTGGTTCTACTGTAGCTGGATTCTCCGGAACCACAAGAATCCTTAGTTAGAATGGGATTCCAACTCAGTACCTTTTGAGATTTTGAGAAGAGTTGCTCTTTGGAGAGCATAGTACGATGAAAGTTGTAAGCTGTGTTCGGGGGGGAGTTATTGTCTATCGTTGGCCTCTATGGTAGAATCAGTCGGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTAGTTTTCACGGGGAAACTGACCACATGATGGGCCCAATTAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGCATGCTAGGGTAAACCAAAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCCGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTCGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCTGTAGTAAATAAGAGAGAAAATCGAATTTGTTTCTTCGTCTTTACAAACAAAAAAAATAGGAGGTAAATTCACTGTATTTCTCTTATCAGTTATATATTTTATAACTATATATTATGGGTGAACGACGGGAATTGAACCCGCGCATGGTGGATTCACAATCCACTGCCTTGATCCACTTGGCTACATCCGCCCCCTACCCTATATATAAGTAGAAATTTGAAAAAAAGTTATGTAAAATTTATTAATAATCAAGGAGCAATACCAACCCTCTTGAGAAAACAAGAAATTGGTTATTGCTCCTTTACTTTCAAGAACTTGTATACACTAAGACAGAAGTCTTATCCATTGATAGATGGAACTTCAATAGCAGCTGGGTCTAGAGGGAAGTTGTGAGCGTTACGTTCATGCATAACTTCCATACCAAGATTAGCACGGTTAATAATATCAGCCCAGGTATTAATTACACGACCTTGACTATCAACTACAGATTGGTTGAAATTGAAACCATTTAAGTTGAAAGCCATAGTGCTAATACCTAAAGCGGTGAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAGTTGTTGAAACTTGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTATGATATTATAAGTTTTTGATCACCCATTTTTTGAAAATCATTTTTGTGGGCTTCCGCCTTACACACGGAAGATTGGATTGCCTGAATCACGAGTCAACTATATTGTGTTACGATCACCTCATATTGATAAAAAGTCCAGAGAACAATTTGAAATGGAAATCAAGAAACAATTTCTGGTCATAAAAACAGAAAGGCATGAATTGCGCAAGAAGTTCTTTCGGTTAAAATGTCGTGCGACTCGGAAGACATAA

mRNA sequence

ATGACGGTTAGTTTTCACGGGGAAACTGACCACATGATGGGCCCAATTAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGCATGCTAGGGTAAACCAAAAAATTTTTGATCACCCATTTTTTGAAAATCATTTTTGTGGGCTTCCGCCTTACACACGGAAGATTGGATTGCCTGAATCACGAGTCAACTATATTGTGTTACGATCACCTCATATTGATAAAAAGTCCAGAGAACAATTTGAAATGGAAATCAAGAAACAATTTCTGGTCATAAAAACAGAAAGGCATGAATTGCGCAAGAAGTTCTTTCGGTTAAAATGTCGTGCGACTCGGAAGACATAA

Coding sequence (CDS)

ATGACGGTTAGTTTTCACGGGGAAACTGACCACATGATGGGCCCAATTAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTGCTCAGCAACAGTCGGACAAGTGGGGCATGCTAGGGTAAACCAAAAAATTTTTGATCACCCATTTTTTGAAAATCATTTTTGTGGGCTTCCGCCTTACACACGGAAGATTGGATTGCCTGAATCACGAGTCAACTATATTGTGTTACGATCACCTCATATTGATAAAAAGTCCAGAGAACAATTTGAAATGGAAATCAAGAAACAATTTCTGGTCATAAAAACAGAAAGGCATGAATTGCGCAAGAAGTTCTTTCGGTTAAAATGTCGTGCGACTCGGAAGACATAA

Protein sequence

MTVSFHGETDHMMGPIKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGHARVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFLVIKTERHELRKKFFRLKCRATRKT
Homology
[Close]
BLAST of CcUC07G134840 vs. NCBI nr
Match: KAF4348321.1 (hypothetical protein F8388_018561 [Cannabis sativa] >KAF4349925.1 hypothetical protein G4B88_002347 [Cannabis sativa])

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-31
Identity = 73/84 (86.90%), Postives = 76/84 (90.48%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 36  RIVIRSFDHPFFENHFGGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFL 95

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           VIKTERHELRKKFFRLK RAT +T
Sbjct: 96  VIKTERHELRKKFFRLKRRATWRT 119

[Close]
BLAST of CcUC07G134840 vs. NCBI nr
Match: KYP31509.1 (hypothetical protein KK1_048135 [Cajanus cajan] >KYP78771.1 hypothetical protein KK1_047737 [Cajanus cajan])

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-31
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKK+FL
Sbjct: 26  RIVIRSFDHPFFENHFGGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKKFL 85

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           +IKTE+HELRKKFFRLK RATR+T
Sbjct: 86  IIKTEKHELRKKFFRLKRRATRRT 109

[Close]
BLAST of CcUC07G134840 vs. NCBI nr
Match: KAF4379538.1 (hypothetical protein F8388_023555 [Cannabis sativa])

HSP 1 Score: 144.4 bits (363), Expect = 7.0e-31
Identity = 73/84 (86.90%), Postives = 76/84 (90.48%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 74  RIVIRSFDHPFFENHFGGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFL 133

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           VIKTERHELRKKFFRLK RAT +T
Sbjct: 134 VIKTERHELRKKFFRLKRRATWRT 157

[Close]
BLAST of CcUC07G134840 vs. NCBI nr
Match: YP_009913641.1 (ribosomal protein S10 [Luffa acutangula] >QLM02673.1 ribosomal protein S10 [Luffa acutangula])

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRVNY VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 6   RIVIRSFDHPFFENHFWGLPPYTRKIGLPESRVNYTVLRSPHIDKKSREQFEMEIKKQFL 65

Query: 113 VIKTERHELRKKFFRLK 130
           VIKTERHELRKKFFRLK
Sbjct: 66  VIKTERHELRKKFFRLK 82

[Close]
BLAST of CcUC07G134840 vs. NCBI nr
Match: DAD25546.1 (TPA_asm: hypothetical protein HUJ06_027010 [Nelumbo nucifera] >DAD25622.1 TPA_asm: hypothetical protein HUJ06_027086 [Nelumbo nucifera])

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30
Identity = 72/84 (85.71%), Postives = 75/84 (89.29%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPF ENHF GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 26  RIVIRSFDHPFLENHFWGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFL 85

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           VIKTE HELRKKFFRLK RATR+T
Sbjct: 86  VIKTETHELRKKFFRLKRRATRRT 109

[Close]
BLAST of CcUC07G134840 vs. ExPASy Swiss-Prot
Match: P51428 (Ribosomal protein S10, mitochondrial OS=Pisum sativum OX=3888 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.2e-28
Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPF ENHF GLPPYT KIGLPESRV Y VLRSPHIDKKSREQFEMEIKK++L
Sbjct: 6   RIVIRSFDHPFLENHFGGLPPYTWKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKKYL 65

Query: 113 VIKTERHELRKKFFRLK 130
           VIKTE+HELRKKFF LK
Sbjct: 66  VIKTEKHELRKKFFWLK 82

[Close]
BLAST of CcUC07G134840 vs. ExPASy Swiss-Prot
Match: P42797 (40S ribosomal protein S10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS10 PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 8.6e-16
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 71  LPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFLVIKTERHELRKKFFRLK 130
           LPP+TRK+ +P++R  Y VLRSPH+DKKSREQFEM  KK+FLVIK + HEL KK F LK
Sbjct: 147 LPPHTRKVAMPDTRTLYTVLRSPHVDKKSREQFEMRFKKRFLVIKAQSHELSKKLFWLK 205

[Close]
BLAST of CcUC07G134840 vs. ExPASy Swiss-Prot
Match: P26869 (Ribosomal protein S10, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS10 PE=3 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-14
Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0 

Query: 64  FENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFLVIKTERHELRK 123
           FEN   GL   TRKIGLP+ +  Y VLRSPHIDKKSREQFEM I KQ LVI+TE H+LR+
Sbjct: 12  FENQRSGLLLNTRKIGLPKKQTLYTVLRSPHIDKKSREQFEMRIHKQLLVIETETHKLRE 71

Query: 124 KFFRLK 130
           K   LK
Sbjct: 72  KLNWLK 77

[Close]
BLAST of CcUC07G134840 vs. ExPASy Swiss-Prot
Match: Q14F95 (50S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-14
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 1   MTVSFHGETDHMMGPI-KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGHARVNQK 58
           +T+   G+     G + KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG+A VNQK
Sbjct: 145 ITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQK 202

[Close]
BLAST of CcUC07G134840 vs. ExPASy Swiss-Prot
Match: Q14FB6 (50S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-14
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = 0 

Query: 1   MTVSFHGETDHMMGPI-KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGHARVNQK 58
           +T+   G+     G + KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG+A VNQK
Sbjct: 144 ITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNAGVNQK 201

[Close]
BLAST of CcUC07G134840 vs. ExPASy TrEMBL
Match: A0A151UHR2 (Ribosomal_S10 domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_047737 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKK+FL
Sbjct: 26  RIVIRSFDHPFFENHFGGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKKFL 85

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           +IKTE+HELRKKFFRLK RATR+T
Sbjct: 86  IIKTEKHELRKKFFRLKRRATRRT 109

[Close]
BLAST of CcUC07G134840 vs. ExPASy TrEMBL
Match: A0A7J6DQE3 (Ribosomal_S10 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_018561 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 73/84 (86.90%), Postives = 76/84 (90.48%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 36  RIVIRSFDHPFFENHFGGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFL 95

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           VIKTERHELRKKFFRLK RAT +T
Sbjct: 96  VIKTERHELRKKFFRLKRRATWRT 119

[Close]
BLAST of CcUC07G134840 vs. ExPASy TrEMBL
Match: A0A7J6G9N2 (Ribosomal_S10 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_023555 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 73/84 (86.90%), Postives = 76/84 (90.48%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 74  RIVIRSFDHPFFENHFGGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFL 133

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           VIKTERHELRKKFFRLK RAT +T
Sbjct: 134 VIKTERHELRKKFFRLKRRATWRT 157

[Close]
BLAST of CcUC07G134840 vs. ExPASy TrEMBL
Match: A0A7D6IQL3 (Ribosomal protein S10 OS=Luffa acutangula OX=56866 GN=rps10 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 5.8e-31
Identity = 70/77 (90.91%), Postives = 72/77 (93.51%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPFFENHF GLPPYTRKIGLPESRVNY VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 6   RIVIRSFDHPFFENHFWGLPPYTRKIGLPESRVNYTVLRSPHIDKKSREQFEMEIKKQFL 65

Query: 113 VIKTERHELRKKFFRLK 130
           VIKTERHELRKKFFRLK
Sbjct: 66  VIKTERHELRKKFFRLK 82

[Close]
BLAST of CcUC07G134840 vs. ExPASy TrEMBL
Match: A0A7H1CQT7 (Ribosomal protein S10 OS=Sapindus mukorossi OX=57655 GN=rps10 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.2e-30
Identity = 72/84 (85.71%), Postives = 75/84 (89.29%), Query Frame = 0 

Query: 53  RVNQKIFDHPFFENHFCGLPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFL 112
           R+  + FDHPF EN F GLPPYTRKIGLPESRV Y VLRSPHIDKKSREQFEMEIKKQFL
Sbjct: 26  RIVIRSFDHPFLENLFLGLPPYTRKIGLPESRVLYTVLRSPHIDKKSREQFEMEIKKQFL 85

Query: 113 VIKTERHELRKKFFRLKCRATRKT 137
           VIKTERHELRKKFFRLK RATR+T
Sbjct: 86  VIKTERHELRKKFFRLKRRATRRT 109

[Close]
BLAST of CcUC07G134840 vs. TAIR 10
Match: AT3G22300.1 (ribosomal protein S10 )

HSP 1 Score: 84.7 bits (208), Expect = 6.1e-17
Identity = 40/59 (67.80%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 71  LPPYTRKIGLPESRVNYIVLRSPHIDKKSREQFEMEIKKQFLVIKTERHELRKKFFRLK 130
           LPP+TRK+ +P++R  Y VLRSPH+DKKSREQFEM  KK+FLVIK + HEL KK F LK
Sbjct: 147 LPPHTRKVAMPDTRTLYTVLRSPHVDKKSREQFEMRFKKRFLVIKAQSHELSKKLFWLK 205

[Close]
BLAST of CcUC07G134840 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 1   MTVSFHGETDHMMGPI-KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGHARVNQK 58
           +T+   G+     G + KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG+  VNQK
Sbjct: 144 ITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQK 201

[Close]
BLAST of CcUC07G134840 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 41/58 (70.69%), Postives = 46/58 (79.31%), Query Frame = 0 

Query: 1   MTVSFHGETDHMMGPI-KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGHARVNQK 58
           +T+   G+     G + KLIAKEGKSATLKLPSGEVRLISKNCSATVGQVG+  VNQK
Sbjct: 144 ITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQK 201

The following BLAST results are available for this feature:
BLAST of CcUC07G134840 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF4348321.17.0e-3186.90hypothetical protein F8388_018561 [Cannabis sativa] >KAF4349925.1 hypothetical p... [more]
KYP31509.17.0e-3184.52hypothetical protein KK1_048135 [Cajanus cajan] >KYP78771.1 hypothetical protein... [more]
KAF4379538.17.0e-3186.90hypothetical protein F8388_023555 [Cannabis sativa][more]
YP_009913641.11.2e-3090.91ribosomal protein S10 [Luffa acutangula] >QLM02673.1 ribosomal protein S10 [Luff... [more]
DAD25546.11.6e-3085.71TPA_asm: hypothetical protein HUJ06_027010 [Nelumbo nucifera] >DAD25622.1 TPA_as... [more]
BLAST of CcUC07G134840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P514281.2e-2881.82Ribosomal protein S10, mitochondrial OS=Pisum sativum OX=3888 GN=RPS10 PE=2 SV=1[more]
P427978.6e-1667.8040S ribosomal protein S10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS1... [more]
P268691.6e-1466.67Ribosomal protein S10, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS10 P... [more]
Q14F956.2e-1472.4150S ribosomal protein L2-A, chloroplastic OS=Populus alba OX=43335 GN=rpl2-A PE=... [more]
Q14FB66.2e-1472.4150S ribosomal protein L2-B, chloroplastic OS=Populus alba OX=43335 GN=rpl2-B PE=... [more]
BLAST of CcUC07G134840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A151UHR23.4e-3184.52Ribosomal_S10 domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_047737 P... [more]
A0A7J6DQE33.4e-3186.90Ribosomal_S10 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_0185... [more]
A0A7J6G9N23.4e-3186.90Ribosomal_S10 domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_0235... [more]
A0A7D6IQL35.8e-3190.91Ribosomal protein S10 OS=Luffa acutangula OX=56866 GN=rps10 PE=3 SV=1[more]
A0A7H1CQT72.2e-3085.71Ribosomal protein S10 OS=Sapindus mukorossi OX=57655 GN=rps10 PE=3 SV=1[more]
BLAST of CcUC07G134840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G22300.16.1e-1767.80ribosomal protein S10 [more]
ATCG00830.11.3e-1470.69ribosomal protein L2 [more]
ATCG01310.11.3e-1470.69ribosomal protein L2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 25..38
score: 22.94
coord: 78..93
score: 42.07
coord: 99..113
score: 39.87
IPR001848Ribosomal protein S10PANTHERPTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERcoord: 42..129
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 16..81
e-value: 0.0039
score: -36.1
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 17..57
e-value: 5.4E-9
score: 36.3
IPR027486Ribosomal protein S10 domainSMARTSM01403Ribosomal_S10_2coord: 27..133
e-value: 0.0035
score: 23.2
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 77..127
e-value: 1.5E-9
score: 38.0
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 14..49
e-value: 2.8E-12
score: 48.3
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600Ribosomal protein S10 domaincoord: 71..134
e-value: 8.2E-10
score: 40.7
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 73..128
NoneNo IPR availablePANTHERPTHR11700:SF740S RIBOSOMAL PROTEIN S10, MITOCHONDRIALcoord: 42..129
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 17..65

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G134840.1CcUC07G134840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome