CcUC07G133780 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G133780
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	major pollen allergen Ole e 6-like
Location	CicolChr07: 7163238 .. 7163954 (+)
RNA-Seq Expression	CcUC07G133780
Synteny	CcUC07G133780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGCAAAAGCATCACCAAAGGCAAGAACAACCAAAAGGAAAATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTAGCTGCTTTGCAGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGCAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGGTACTCTCTTTTCTCTCTATTTCTTGATGCTGTTAAATTATTTATTTTCCCATTTTCATCCATATTTCATAATCAAGAAATTCTTATTTTTGTGAATTTACACACTTTTATGTATGTCTCAAACCCTTTATTCTCATACAGTTTTATTTTCTTATATTAATTTAAATTGTTGTCTATTTTCCTCACAGATAAGCTAAACATCAAATTGAATTGAATGATGAGGAGCAAAAAGAAAGAAGATCTCTTGAGAAGGATCAAGTAGCAATATTATTGTATCAAAATCAAGCTTGTAAAGTTATTTTAATATTAAAATTGTTAAAATTCTTGGTCTTTGGTGTTATTGATATGTGAATCCACCATTGTCATGGTGGGTGTCATTTTTATTCAAGAATAAAATATGTTTACAATTTTGTATAAATTCTTGATGAACTCCTATACTCATCTTGCAT

mRNA sequence

CTCGCAAAAGCATCACCAAAGGCAAGAACAACCAAAAGGAAAATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTAGCTGCTTTGCAGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGCAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGATAAGCTAAACATCAAATTGAATTGAATGATGAGGAGCAAAAAGAAAGAAGATCTCTTGAGAAGGATCAAGTAGCAATATTATTGTATCAAAATCAAGCTTGTAAAGTTATTTTAATATTAAAATTGTTAAAATTCTTGGTCTTTGGTGTTATTGATATGTGAATCCACCATTGTCATGGTGGGTGTCATTTTTATTCAAGAATAAAATATGTTTACAATTTTGTATAAATTCTTGATGAACTCCTATACTCATCTTGCAT

Coding sequence (CDS)

ATGGCCAAGAAAATGATTGCAGTGTTTTTGATGTTCATTGTGGTGGTAGCTGCTTTGCAGTTTGCCACTGCCAATGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGTTATGAAACTTGCGAGAAGGAATGCCTTGAAAATGGCAATGGCCAAAGCTTCTGTGAAGTTAAATGTGATGAAGATTGTGATGAAAAAGAAACTGCTGATAAGCTAAACATCAAATTGAATTGA

Protein sequence

MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSFCEVKCDEDCDEKETADKLNIKLN

Homology

[Close]

BLAST of CcUC07G133780 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33
Identity = 76/83 (91.57%), Postives = 80/83 (96.39%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSF 60
          MAKKM+AVFLM IVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECL NG+GQSF
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60

Query: 61 CEVKCDEDCDEKETADKLNIKLN 84
          CEVKCDEDCDEKE ADKL+IKL+
Sbjct: 61 CEVKCDEDCDEKEVADKLHIKLH 83

[Close]

BLAST of CcUC07G133780 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 141.7 bits (356), Expect = 2.8e-30
Identity = 74/81 (91.36%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSF 60
          MAKKMIAVFLM IVV+AALQF TANE EV KYEAKFDAKYKSCYETCEKECLE GNGQSF
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTANE-EVAKYEAKFDAKYKSCYETCEKECLEKGNGQSF 60

Query: 61 CEVKCDEDCDEKETADKLNIK 82
          CEVKCDEDCDEKETADKL+IK
Sbjct: 61 CEVKCDEDCDEKETADKLHIK 80

[Close]

BLAST of CcUC07G133780 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29
Identity = 72/83 (86.75%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSF 60
          MAKKMIAVF M IVV+AALQFATANE EV KYEAKFDAKYKSCYETCEKECLENG+GQ+F
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATANE-EVDKYEAKFDAKYKSCYETCEKECLENGSGQTF 60

Query: 61 CEVKCDEDCDEKETADKLNIKLN 84
          CEVKCDEDCDEKE ADKL+I+L+
Sbjct: 61 CEVKCDEDCDEKEKADKLHIELH 82

[Close]

BLAST of CcUC07G133780 vs. NCBI nr
Match: XP_038906677.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 137.5 bits (345), Expect = 5.2e-29
Identity = 71/83 (85.54%), Postives = 77/83 (92.77%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSF 60
          MAKK+IAVF M IVV+AA QFATANE EV KYEAKF+AKYKSCYETCEKECLE GNGQSF
Sbjct: 1  MAKKIIAVFFMCIVVMAAFQFATANE-EVEKYEAKFEAKYKSCYETCEKECLEGGNGQSF 60

Query: 61 CEVKCDEDCDEKETADKLNIKLN 84
          CEVKCDEDCDEKETADKL+I+L+
Sbjct: 61 CEVKCDEDCDEKETADKLHIELH 82

[Close]

BLAST of CcUC07G133780 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 137.1 bits (344), Expect = 6.8e-29
Identity = 70/84 (83.33%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENGNGQS 60
          MAKKMIA+FLM IVVVAALQFA+AN EDEV KYEAKFDAKYKSC++TCEKECLENG+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKETADKLNIKLN 84
          +CEVKCDEDC+EKE ADKL+I+L+
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of CcUC07G133780 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.4e-08
Identity = 23/42 (54.76%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 37 DAKYKSCYETCEKECLENGNGQSFCEVKCDEDCDEKETADKL 79
          +A++K CY+TC KEC + GNG +FCE+KCD DC  K+  +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]

BLAST of CcUC07G133780 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-29
Identity = 70/84 (83.33%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENGNGQS 60
          MAKKMIA+FLM IVVVAALQFA+AN EDEV KYEAKFDAKYKSC++TCEKECLENG+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKETADKLNIKLN 84
          +CEVKCDEDC+EKE ADKL+I+L+
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of CcUC07G133780 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 3.3e-29
Identity = 70/84 (83.33%), Postives = 80/84 (95.24%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENGNGQS 60
          MAKKMIA+FLM IVVVAALQFA+AN EDEV KYEAKFDAKYKSC++TCEKECLENG+GQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCDEKETADKLNIKLN 84
          +CEVKCDEDC+EKE ADKL+I+L+
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of CcUC07G133780 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.7e-28
Identity = 66/83 (79.52%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLENGNGQSF 60
          MA KMIA+FLM IVVVAALQFA AN+++V KYEAKFDAKYKSC+ETCEKECL  G+GQS+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCDEKETADKLNIKLN 84
          CEVKCDEDCDEKE ADKL+I+L+
Sbjct: 61 CEVKCDEDCDEKEAADKLHIELH 83

[Close]

BLAST of CcUC07G133780 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26
Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLENG-NGQ 60
          MAKKM+AVFLM IVVVA LQF  AN ED VTKYEAKFDAKYKSCYETCEKECL N  NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKETADKLNIKLN 84
          SFCEVKCDEDC EKE ADKL+I+L+
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]

BLAST of CcUC07G133780 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 67/84 (79.76%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 1  MAKKMIAVFLMFIVVVAALQFATA-NEDEVTKYEAKFDAKYKSCYETCEKECLENG-NGQ 60
          MAKKM+AVFLM IV+VA LQFA A  EDEVTKYEAKFDAKYKSCYETCEKECL+ G NGQ
Sbjct: 1  MAKKMMAVFLMCIVLVATLQFAIAKEEDEVTKYEAKFDAKYKSCYETCEKECLQKGNNGQ 60

Query: 61 SFCEVKCDEDCDEKETADKLNIKL 83
          SFCEVKCDEDC EKE A  L + L
Sbjct: 61 SFCEVKCDEDCSEKEAAGILLLSL 84

The following BLAST results are available for this feature:

BLAST of CcUC07G133780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891517.1	6.0e-33	91.57	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038906682.1	2.8e-30	91.36	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_038875643.1	1.8e-29	86.75	major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol...	[more]
XP_038906677.1	5.2e-29	85.54	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
XP_008456958.1	6.8e-29	83.33	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]

BLAST of CcUC07G133780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	2.4e-08	54.76	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of CcUC07G133780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BCS2	3.3e-29	83.33	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	3.3e-29	83.33	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A0A0KPA7	3.7e-28	79.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1	[more]
A0A0A0K9Z9	2.0e-26	81.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]
A0A5A7TDR1	1.1e-24	79.76	Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of CcUC07G133780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 43..79 e-value: 5.9E-13 score: 48.5
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..82
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 37..83 e-value: 7.1E-17 score: 62.7
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 37..78
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G133780.1	CcUC07G133780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016121	carotene catabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen