CcUC07G131490 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G131490
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	CDT1-like protein b
Location	CicolChr07: 3064188 .. 3065379 (-)
RNA-Seq Expression	CcUC07G131490
Synteny	CcUC07G131490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACTCGTATTAATATATTCTAACATAAAACAATACATAATCTAACATTCTCTTTCTTGGCTACGACGACGACACGTCGTCGTCGTCGTCTGGTGATGCTTCTCATTTCCAAAGTCTGACTGCAATTTTCTATTTTGACTTAGGGTTTTTTTGCTCTGCCAAGGGATGCCCCTTGGAACCATAATATTGCTTGGAGCACAATGTCTCTTCACATTTTCAGTCTCCATATTCCTTGGAGCTTTAGATGCTTGTATGTTTAATTTCCCAATTAATGCATATACCTGTTCTTGATCCTCAGACTAAGGTTTGTGCTTCTTTGGATTATATCTTTTGAACCATGACTCTAAATTGAGCTTCATATATATAACAATCTTAAGTGCATTTTGGCAACTGGGTTTGGCTTGATTCTTTTAAAAAAATTGTGATTTATGTCATTTGATAAGCATTTTTTGTGATTATCTTTGGCATCATCAGCGATGCTTAGTTTGGTTTGTTTCTGATTGCAATGACAGTTACCTTTCATTGCTAATTTCTAGTCTGTTCATTCGCAATGCAGGCACTATCAAGGCTTACAATTCAAACTCTAAAGTTGATTTTGTCTCTTCTTCTACTAAAGGTCATTGCCAATACAGATTCAGAGACTTGTTTAGAGATAATGAGTTATGCAGCAAAAGGAATTGGTTTTTTGCATCAACTCTTGGAGTTGGGTTTCTTTTTTCATTAGTTTTCCTTACATCACTTCTTGCAGAAAGAGTGATTGGGCCAAAGGTTAGCATGATGAATTTCTGTCAACTTTTGCCTTTTTCCATTGAATTTTCTTTTACATCGCTTTGTAATAGCATTGTTTCGTATCAAAAGTATCAAGTTTATAGGACTACAAGGCATTGTTCTATCTACTGATCACATTTATAGAATATTTAAATCATTTGGGGATAAGCTTTGAGTGGTTTTTATTGCTGCCATATCAAAACCATATTCATCGATCATTGCCAATCTAGCAAGAATCTTTAAACATAGATTTTCTTGGGACTTCCAAATTTTATGGACTTTTGTATCCAAAAGATGGGATTTTGTGTTTACAAGATTATGATTCCACTGGATTGTAGGTTGTAAACAACTCTGTGCTGAAGGAGATTCTTGACAGCAGCAACATCTCAAGAGTAGCATACTTCACACGATCATCATCTTAA

mRNA sequence

ATGTACTCGGTTTTTTTGCTCTGCCAAGGGATGCCCCTTGGAACCATAATATTGCTTGGAGCACAATGTCTCTTCACATTTTCAGTCTCCATATTCCTTGGAGCTTTAGATGCTTGTATTCTGTTCATTCGCAATGCAGGCACTATCAAGGCTTACAATTCAAACTCTAAAGTTGATTTTGTCTCTTCTTCTACTAAAGGTCATTGCCAATACAGATTCAGAGACTTGTTTAGAGATAATGAGTTATGCAGCAAAAGGAATTGGTTTTTTGCATCAACTCTTGGAGTTGGGTTTCTTTTTTCATTAGTTTTCCTTACATCACTTCTTGCAGAAAGAGTGATTGGGCCAAAGGTTGTAAACAACTCTGTGCTGAAGGAGATTCTTGACAGCAGCAACATCTCAAGAGTAGCATACTTCACACGATCATCATCTTAA

Coding sequence (CDS)

ATGTACTCGGTTTTTTTGCTCTGCCAAGGGATGCCCCTTGGAACCATAATATTGCTTGGAGCACAATGTCTCTTCACATTTTCAGTCTCCATATTCCTTGGAGCTTTAGATGCTTGTATTCTGTTCATTCGCAATGCAGGCACTATCAAGGCTTACAATTCAAACTCTAAAGTTGATTTTGTCTCTTCTTCTACTAAAGGTCATTGCCAATACAGATTCAGAGACTTGTTTAGAGATAATGAGTTATGCAGCAAAAGGAATTGGTTTTTTGCATCAACTCTTGGAGTTGGGTTTCTTTTTTCATTAGTTTTCCTTACATCACTTCTTGCAGAAAGAGTGATTGGGCCAAAGGTTGTAAACAACTCTGTGCTGAAGGAGATTCTTGACAGCAGCAACATCTCAAGAGTAGCATACTTCACACGATCATCATCTTAA

Protein sequence

MYSVFLLCQGMPLGTIILLGAQCLFTFSVSIFLGALDACILFIRNAGTIKAYNSNSKVDFVSSSTKGHCQYRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDSSNISRVAYFTRSSS

Homology

[Close]

BLAST of CcUC07G131490 vs. NCBI nr
Match: XP_038888338.1 (uncharacterized protein LOC120078184 isoform X2 [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22
Identity = 58/69 (84.06%), Postives = 61/69 (88.41%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  G+GFLFSL FLTSLLAER+IGPKVVNN VLKEILDS
Sbjct: 141 YRFRNFFRDNELCSKRNWVFASAFGIGFLFSLAFLTSLLAERLIGPKVVNNHVLKEILDS 200

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 201 SNISRAACF 209

[Close]

BLAST of CcUC07G131490 vs. NCBI nr
Match: TYK14105.1 (CDT1-like protein b [Cucumis melo var. makuwa])

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  GVGFL SLVFLTSLLAERVIGPK V+N VLKEILD 
Sbjct: 171 YRFRNFFRDNELCSKRNWIFASAFGVGFLLSLVFLTSLLAERVIGPKAVSNLVLKEILDC 230

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 231 SNISRTACF 239

[Close]

BLAST of CcUC07G131490 vs. NCBI nr
Match: XP_008461908.1 (PREDICTED: uncharacterized protein LOC103500400 isoform X1 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  GVGFL SLVFLTSLLAERVIGPK V+N VLKEILD 
Sbjct: 152 YRFRNFFRDNELCSKRNWIFASAFGVGFLLSLVFLTSLLAERVIGPKAVSNLVLKEILDC 211

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 212 SNISRTACF 220

[Close]

BLAST of CcUC07G131490 vs. NCBI nr
Match: XP_008461909.1 (PREDICTED: uncharacterized protein LOC103500400 isoform X2 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  GVGFL SLVFLTSLLAERVIGPK V+N VLKEILD 
Sbjct: 99  YRFRNFFRDNELCSKRNWIFASAFGVGFLLSLVFLTSLLAERVIGPKAVSNLVLKEILDC 158

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 159 SNISRTACF 167

[Close]

BLAST of CcUC07G131490 vs. NCBI nr
Match: XP_038888337.1 (uncharacterized protein LOC120078184 isoform X1 [Benincasa hispida])

HSP 1 Score: 112.5 bits (280), Expect = 3.1e-21
Identity = 58/70 (82.86%), Postives = 61/70 (87.14%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPK-VVNNSVLKEILD 130
           YRFR+ FRDNELCSKRNW FAS  G+GFLFSL FLTSLLAER+IGPK VVNN VLKEILD
Sbjct: 141 YRFRNFFRDNELCSKRNWVFASAFGIGFLFSLAFLTSLLAERLIGPKQVVNNHVLKEILD 200

Query: 131 SSNISRVAYF 140
           SSNISR A F
Sbjct: 201 SSNISRAACF 210

[Close]

BLAST of CcUC07G131490 vs. ExPASy TrEMBL
Match: A0A5A7UUF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold518G00320 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  GVGFL SLVFLTSLLAERVIGPK V+N VLKEILD 
Sbjct: 224 YRFRNFFRDNELCSKRNWIFASAFGVGFLLSLVFLTSLLAERVIGPKAVSNLVLKEILDC 283

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 284 SNISRTACF 292

[Close]

BLAST of CcUC07G131490 vs. ExPASy TrEMBL
Match: A0A5D3CR97 (CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00210 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  GVGFL SLVFLTSLLAERVIGPK V+N VLKEILD 
Sbjct: 171 YRFRNFFRDNELCSKRNWIFASAFGVGFLLSLVFLTSLLAERVIGPKAVSNLVLKEILDC 230

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 231 SNISRTACF 239

[Close]

BLAST of CcUC07G131490 vs. ExPASy TrEMBL
Match: A0A1S3CFT6 (uncharacterized protein LOC103500400 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500400 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  GVGFL SLVFLTSLLAERVIGPK V+N VLKEILD 
Sbjct: 152 YRFRNFFRDNELCSKRNWIFASAFGVGFLLSLVFLTSLLAERVIGPKAVSNLVLKEILDC 211

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 212 SNISRTACF 220

[Close]

BLAST of CcUC07G131490 vs. ExPASy TrEMBL
Match: A0A1S3CFP5 (uncharacterized protein LOC103500400 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500400 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR+ FRDNELCSKRNW FAS  GVGFL SLVFLTSLLAERVIGPK V+N VLKEILD 
Sbjct: 99  YRFRNFFRDNELCSKRNWIFASAFGVGFLLSLVFLTSLLAERVIGPKAVSNLVLKEILDC 158

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 159 SNISRTACF 167

[Close]

BLAST of CcUC07G131490 vs. ExPASy TrEMBL
Match: A0A0A0K4Q9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G291730 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 9.8e-21
Identity = 56/69 (81.16%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 71  YRFRDLFRDNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDS 130
           YRFR  FRDNELC+KRNW FAS  GVGFLFSLVFLTSLLAE VIGPK V+N VLKEILD 
Sbjct: 141 YRFRYFFRDNELCNKRNWIFASAFGVGFLFSLVFLTSLLAESVIGPKAVSNLVLKEILDC 200

Query: 131 SNISRVAYF 140
           SNISR A F
Sbjct: 201 SNISRTACF 209

[Close]

BLAST of CcUC07G131490 vs. TAIR 10
Match: AT2G20725.1 (CAAX amino terminal protease family protein )

HSP 1 Score: 52.4 bits (124), Expect = 3.6e-07
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 79  DNELCSKRNWFFASTLGVGFLFSLVFLTSLLAERVIGPKVVNNSVLKEILDSSNISRVAY 138
           +NE    RNW   S LG+G L   +F+TSL+A+++ GPK V+ S L++I+ S  ++R   
Sbjct: 153 NNETREGRNWVVGSALGLGCLVGFIFVTSLVADQLFGPKAVHESELEKIMVSGEVARSGC 212

Query: 139 F 140
           F
Sbjct: 213 F 213

The following BLAST results are available for this feature:

BLAST of CcUC07G131490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888338.1	1.3e-22	84.06	uncharacterized protein LOC120078184 isoform X2 [Benincasa hispida]	[more]
TYK14105.1	3.1e-21	82.61	CDT1-like protein b [Cucumis melo var. makuwa]	[more]
XP_008461908.1	3.1e-21	82.61	PREDICTED: uncharacterized protein LOC103500400 isoform X1 [Cucumis melo]	[more]
XP_008461909.1	3.1e-21	82.61	PREDICTED: uncharacterized protein LOC103500400 isoform X2 [Cucumis melo]	[more]
XP_038888337.1	3.1e-21	82.86	uncharacterized protein LOC120078184 isoform X1 [Benincasa hispida]	[more]

BLAST of CcUC07G131490 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G131490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UUF1	1.5e-21	82.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3CR97	1.5e-21	82.61	CDT1-like protein b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193...	[more]
A0A1S3CFT6	1.5e-21	82.61	uncharacterized protein LOC103500400 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CFP5	1.5e-21	82.61	uncharacterized protein LOC103500400 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0K4Q9	9.8e-21	81.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G291730 PE=4 SV=1	[more]

BLAST of CcUC07G131490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20725.1	3.6e-07	40.98	CAAX amino terminal protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43592:SF4	CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN	coord: 68..140
None	No IPR available	PANTHER	PTHR43592	CAAX AMINO TERMINAL PROTEASE	coord: 68..140

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G131490.1	CcUC07G131490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071586	CAAX-box protein processing
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004222	metalloendopeptidase activity