CcUC07G131440 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G131440
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative
Location	CicolChr07: 3010304 .. 3010708 (+)
RNA-Seq Expression	CcUC07G131440
Synteny	CcUC07G131440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCCCTTCCAACGAAAAACAAAAGAAAGAAAGGGCCACCACGTTTCCATGAAGAAAACAGGGCTGTTCGCCGCCTCCGTCGCCGCCGCCTCCGCCACCGCCCTGTCTGCTCCGCCCTCTTCCGCCCGTTTCCTCGAAACCTCCTTTTCCCATCAGGTAAAAATTCACTCAAATTCTCACTTCTCAAACAAACCCATTTACAAAACAAACCAAAACCAAACCAATTGATTTATTCTTGGGTATTTCAGGAAAAACTCACCAGAGACGAGGAAAGTACTACTCCGTCGAGAAGATCGCCGCCGTCAACGACGGCGGATCAATTTGCTCCAAGATTCGATGGGTTAAGATTCATTGAAACTCTTGTCACTGCTCATAGATGATAAGCTTGGGATTTGGCAATAAGG

mRNA sequence

ATTTCCCTTCCAACGAAAAACAAAAGAAAGAAAGGGCCACCACGTTTCCATGAAGAAAACAGGGCTGTTCGCCGCCTCCGTCGCCGCCGCCTCCGCCACCGCCCTGTCTGCTCCGCCCTCTTCCGCCCGTTTCCTCGAAACCTCCTTTTCCCATCAGGAAAAACTCACCAGAGACGAGGAAAGTACTACTCCGTCGAGAAGATCGCCGCCGTCAACGACGGCGGATCAATTTGCTCCAAGATTCGATGGGTTAAGATTCATTGAAACTCTTGTCACTGCTCATAGATGATAAGCTTGGGATTTGGCAATAAGG

Coding sequence (CDS)

ATGAAGAAAACAGGGCTGTTCGCCGCCTCCGTCGCCGCCGCCTCCGCCACCGCCCTGTCTGCTCCGCCCTCTTCCGCCCGTTTCCTCGAAACCTCCTTTTCCCATCAGGAAAAACTCACCAGAGACGAGGAAAGTACTACTCCGTCGAGAAGATCGCCGCCGTCAACGACGGCGGATCAATTTGCTCCAAGATTCGATGGGTTAAGATTCATTGAAACTCTTGTCACTGCTCATAGATGA

Protein sequence

MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQFAPRFDGLRFIETLVTAHR

Homology

[Close]

BLAST of CcUC07G131440 vs. NCBI nr
Match: XP_038888462.1 (uncharacterized protein LOC120078298 [Benincasa hispida])

HSP 1 Score: 130.2 bits (326), Expect = 7.9e-27
Identity = 69/79 (87.34%), Postives = 75/79 (94.94%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQ 60
          MKKTGLFAASVAAASATALSAPPSSA  L+T+FSHQE++TRD+E TTPSRRSPPST A+Q
Sbjct: 1  MKKTGLFAASVAAASATALSAPPSSAGILKTTFSHQEQVTRDQEITTPSRRSPPSTAAEQ 60

Query: 61 FAPRFDGLRFIETLVTAHR 80
          FAPRFDGLRFIETLVTAHR
Sbjct: 61 FAPRFDGLRFIETLVTAHR 79

[Close]

BLAST of CcUC07G131440 vs. NCBI nr
Match: KGN43613.1 (hypothetical protein Csa_020428 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQ 60
          MKKTGLFAASVAAASATALSAPP+S   L+T+FS QEK+TRDEESTTP+RRSPPST ADQ
Sbjct: 1  MKKTGLFAASVAAASATALSAPPASPGLLKTNFSRQEKVTRDEESTTPARRSPPSTAADQ 60

Query: 61 FAPRFDGLRFIETLVTAHR 80
          FAPRFDGLRFIETLVTAHR
Sbjct: 61 FAPRFDGLRFIETLVTAHR 79

[Close]

BLAST of CcUC07G131440 vs. NCBI nr
Match: KAA0031576.1 (hypothetical protein E6C27_scaffold139G003430 [Cucumis melo var. makuwa] >TYK07028.1 hypothetical protein E5676_scaffold13G003450 [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 7.4e-25
Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEK-LTRDEESTTPSRRSPPSTTAD 60
          MKKTGLFAASVAAASATALSAPPSS   L+T+FSHQEK + RDEE TTP+RRSPPST +D
Sbjct: 1  MKKTGLFAASVAAASATALSAPPSSPSTLKTNFSHQEKVIARDEEITTPTRRSPPSTASD 60

Query: 61 QFAPRFDGLRFIETLVTAHR 80
          QFAPRFDGLRFIETLVTAHR
Sbjct: 61 QFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of CcUC07G131440 vs. NCBI nr
Match: XP_023554654.1 (uncharacterized protein LOC111811842 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 9.1e-23
Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQ 60
          MKKTGLFAASVAAASATALSAP SS   L+T+FSHQEK+   +E T+PSR SPPST ADQ
Sbjct: 3  MKKTGLFAASVAAASATALSAPSSSTGVLKTTFSHQEKVISRDEETSPSRISPPSTAADQ 62

Query: 61 FAPRFDGLRFIETLVTAHR 80
          FAPRFDGLRFIETLVTAHR
Sbjct: 63 FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of CcUC07G131440 vs. NCBI nr
Match: XP_022952670.1 (uncharacterized protein LOC111455296 [Cucurbita moschata] >KAG6572361.1 hypothetical protein SDJN03_29089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011972.1 hypothetical protein SDJN02_26880 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-22
Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQ 60
          MKKTGLFAASVAAASATALSAP SSA  L+T+FSHQEK+   +E T+PSR SPPST  DQ
Sbjct: 3  MKKTGLFAASVAAASATALSAPSSSAGVLKTTFSHQEKVISRDEETSPSRISPPSTAPDQ 62

Query: 61 FAPRFDGLRFIETLVTAHR 80
          FAPRFDGLRFIETLVTAHR
Sbjct: 63 FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of CcUC07G131440 vs. ExPASy TrEMBL
Match: A0A0A0K2C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047970 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.6e-27
Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQ 60
          MKKTGLFAASVAAASATALSAPP+S   L+T+FS QEK+TRDEESTTP+RRSPPST ADQ
Sbjct: 1  MKKTGLFAASVAAASATALSAPPASPGLLKTNFSRQEKVTRDEESTTPARRSPPSTAADQ 60

Query: 61 FAPRFDGLRFIETLVTAHR 80
          FAPRFDGLRFIETLVTAHR
Sbjct: 61 FAPRFDGLRFIETLVTAHR 79

[Close]

BLAST of CcUC07G131440 vs. ExPASy TrEMBL
Match: A0A5D3C7A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003450 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.6e-25
Identity = 68/80 (85.00%), Postives = 73/80 (91.25%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEK-LTRDEESTTPSRRSPPSTTAD 60
          MKKTGLFAASVAAASATALSAPPSS   L+T+FSHQEK + RDEE TTP+RRSPPST +D
Sbjct: 1  MKKTGLFAASVAAASATALSAPPSSPSTLKTNFSHQEKVIARDEEITTPTRRSPPSTASD 60

Query: 61 QFAPRFDGLRFIETLVTAHR 80
          QFAPRFDGLRFIETLVTAHR
Sbjct: 61 QFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of CcUC07G131440 vs. ExPASy TrEMBL
Match: A0A6J1GMF4 (uncharacterized protein LOC111455296 OS=Cucurbita moschata OX=3662 GN=LOC111455296 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 5.7e-23
Identity = 64/79 (81.01%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQ 60
          MKKTGLFAASVAAASATALSAP SSA  L+T+FSHQEK+   +E T+PSR SPPST  DQ
Sbjct: 3  MKKTGLFAASVAAASATALSAPSSSAGVLKTTFSHQEKVISRDEETSPSRISPPSTAPDQ 62

Query: 61 FAPRFDGLRFIETLVTAHR 80
          FAPRFDGLRFIETLVTAHR
Sbjct: 63 FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of CcUC07G131440 vs. ExPASy TrEMBL
Match: A0A6J1I0M0 (uncharacterized protein LOC111468357 OS=Cucurbita maxima OX=3661 GN=LOC111468357 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.5e-23
Identity = 64/79 (81.01%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTTADQ 60
          MKKTGLFAASVAAASATALSAP SSA  L+T+FSHQEK+   +E ++PSR SPPST ADQ
Sbjct: 3  MKKTGLFAASVAAASATALSAPSSSAGVLKTTFSHQEKVIIRDEESSPSRISPPSTAADQ 62

Query: 61 FAPRFDGLRFIETLVTAHR 80
          FAPRFDGLRFIETLVTAHR
Sbjct: 63 FAPRFDGLRFIETLVTAHR 81

[Close]

BLAST of CcUC07G131440 vs. ExPASy TrEMBL
Match: E0CTD2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.3e-10
Identity = 51/82 (62.20%), Postives = 61/82 (74.39%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSAPPSSARFLETSFSHQEKLTRDEE---STTPSRRSPPSTT 60
          MKK+G FAASVAAASATA+SA PSS+ FL  S   + +L+RDE        +  S  S++
Sbjct: 1  MKKSGFFAASVAAASATAISA-PSSSGFLCNS---KIQLSRDEAVAGKDIENSESQRSSS 60

Query: 61 ADQFAPRFDGLRFIETLVTAHR 80
          AD+FAPRFDGLRFIETLVTAHR
Sbjct: 61 ADRFAPRFDGLRFIETLVTAHR 78

[Close]

BLAST of CcUC07G131440 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 3.6e-09
Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = 0


Query: 1  MKKTGLFAASVA-AASATALSAPPSSARFLETSFSHQEKLTRDEESTTPSRRSPPSTT-- 60
          MKKTG+ AAS++ AASATA+SA  ++      SFS  E     +E+    R+   S+   
Sbjct: 1  MKKTGIIAASISVAASATAISAGSTNT---SVSFSSPESNLSRQEAKEKQRKKKGSSEDG 60

Query: 61 -ADQFAPRFDGLRFIETLVTAHR 80
            ++FAPRFDGLRFIETLVTAHR
Sbjct: 61 GDEKFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of CcUC07G131440 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 3.5e-04
Identity = 34/83 (40.96%), Postives = 39/83 (46.99%), Query Frame = 0


Query: 1  MKKTGLFAASVAAASATALSA----PPSSARFLETSFSHQEKLTRDEESTTPSRRSPPST 60
          MK +    ASV A S  ALS+    PP S +  E                     S  + 
Sbjct: 1  MKVSSGVVASVIAVSTAALSSSSILPPVSPKVWE---------------------SRKTN 60

Query: 61 TADQFAPRFDGLRFIETLVTAHR 80
           +D F PRFDGLRFIETLVTAHR
Sbjct: 61 GSDNFEPRFDGLRFIETLVTAHR 62

The following BLAST results are available for this feature:

BLAST of CcUC07G131440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888462.1	7.9e-27	87.34	uncharacterized protein LOC120078298 [Benincasa hispida]	[more]
KGN43613.1	1.4e-26	87.34	hypothetical protein Csa_020428 [Cucumis sativus]	[more]
KAA0031576.1	7.4e-25	85.00	hypothetical protein E6C27_scaffold139G003430 [Cucumis melo var. makuwa] >TYK070...	[more]
XP_023554654.1	9.1e-23	81.01	uncharacterized protein LOC111811842 [Cucurbita pepo subsp. pepo]	[more]
XP_022952670.1	1.2e-22	81.01	uncharacterized protein LOC111455296 [Cucurbita moschata] >KAG6572361.1 hypothet...	[more]

BLAST of CcUC07G131440 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G131440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2C1	6.6e-27	87.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047970 PE=4 SV=1	[more]
A0A5D3C7A0	3.6e-25	85.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1GMF4	5.7e-23	81.01	uncharacterized protein LOC111455296 OS=Cucurbita moschata OX=3662 GN=LOC1114552...	[more]
A0A6J1I0M0	7.5e-23	81.01	uncharacterized protein LOC111468357 OS=Cucurbita maxima OX=3661 GN=LOC111468357...	[more]
E0CTD2	4.3e-10	62.20	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=...	[more]

BLAST of CcUC07G131440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28290.1	3.6e-09	50.60	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G42110.1	3.5e-04	40.96	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..48
None	No IPR available	PANTHER	PTHR34683	EXPRESSED PROTEIN-RELATED	coord: 1..79
None	No IPR available	PANTHER	PTHR34683:SF2	EXPRESSED PROTEIN	coord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G131440.1	CcUC07G131440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane