CcUC07G131260 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G131260
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10
Location	CicolChr07: 2845580 .. 2846577 (-)
RNA-Seq Expression	CcUC07G131260
Synteny	CcUC07G131260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCACAAGCCTAGTTTGTTTAGGGAATTTTTTTTAATATAAGAAAAAAAAACCCTAATATCTTTGTGTTTACCAATATATATTTAATCTAACATGTGATATGATAAGATAACCAAACCTATGAAAAGCTATATGAATAATAAGAGAGAGAATGAAAAACAAAATACAAAATTGAAGTATATGAAGAAAAAGATGAATGAGAGAAAAAAAGCAAGTTAATGTGGCCCATAACATGTCTATTCAATAGCTCCATGATTTGATTTGCATCTTCTTCCACTCTCCCACACTCTTCTCCTCTATTCATTTCACCCTCACACACACACCAAAAATTAAAGTTCCCCCCTTTCAAAATATTTTGCCTTATTTAGCAAAATTAAGTTCCATCAGTTTGATCAGCTCTTTCATATTCTCAATTTGACCATCAAAAAGGAAAAAAAAATGTCAATTGAAGGATCAATTAGCAAAGATTTTTCAGAAGGATCTTCATCAAGTTCTTCCCCTCAACCAAGTGGTGGAAGTCATGGATCAACCCCAAGTAGATATGAGTCCCAAAAAAGAAGAGATTGGAACACATTTTGCCAATATTTGAAGAATCAAAGGCCACCAGTTCCTCTTTCTCATTGTAATTGCAACCAAGTTTTGGAATTTTTAAGGTACCTTGATCAATTTGGTAAAACAAAAGTTCATATTCAAGGTTGTATGTTTTATGGACAGCCTGAGCCACCTGCCCCTTGTACTTGTCCATTAAGACAAGCTTGGGGAAGTTTAGATGCTTTAATTGGGAGATTAAGAGCTGCTTATGAAGAAAATGGTGGTTCACCAGAGACTAATCCTTTTGCTAGTGGTGCAATTAGGGTTTATCTTAGGGAGGTTAGGGAATGTCAAGCTAAAGCAAGAGGAATTCCTTACAAAAAGAAGAAGAAGAAAATTACTTCTACTAGTCAAATCAAAGGAGGTGATCAAGATTCTACTTCAAGCTCCATGATGCACTTT

mRNA sequence

ATGGATTTCCATCAGTTTGATCAGCTCTTTCATATTCTCAATTTGACCATCAAAAAGGAAAAAAAAATGTCAATTGAAGGATCAATTAGCAAAGATTTTTCAGAAGGATCTTCATCAAGTTCTTCCCCTCAACCAAGTGGTGGAAGTCATGGATCAACCCCAAGTAGATATGAGTCCCAAAAAAGAAGAGATTGGAACACATTTTGCCAATATTTGAAGAATCAAAGGCCACCAGTTCCTCTTTCTCATTGTAATTGCAACCAAGTTTTGGAATTTTTAAGGTACCTTGATCAATTTGGTAAAACAAAAGTTCATATTCAAGGTTGTATGTTTTATGGACAGCCTGAGCCACCTGCCCCTTGTACTTGTCCATTAAGACAAGCTTGGGGAAGTTTAGATGCTTTAATTGGGAGATTAAGAGCTGCTTATGAAGAAAATGGTGGTTCACCAGAGACTAATCCTTTTGCTAGTGGTGCAATTAGGGTTTATCTTAGGGAGGTTAGGGAATGTCAAGCTAAAGCAAGAGGAATTCCTTACAAAAAGAAGAAGAAGAAAATTACTTCTACTAGTCAAATCAAAGGAGGTGATCAAGATTCTACTTCAAGCTCCATGATGCACTTT

Coding sequence (CDS)

ATGGATTTCCATCAGTTTGATCAGCTCTTTCATATTCTCAATTTGACCATCAAAAAGGAAAAAAAAATGTCAATTGAAGGATCAATTAGCAAAGATTTTTCAGAAGGATCTTCATCAAGTTCTTCCCCTCAACCAAGTGGTGGAAGTCATGGATCAACCCCAAGTAGATATGAGTCCCAAAAAAGAAGAGATTGGAACACATTTTGCCAATATTTGAAGAATCAAAGGCCACCAGTTCCTCTTTCTCATTGTAATTGCAACCAAGTTTTGGAATTTTTAAGGTACCTTGATCAATTTGGTAAAACAAAAGTTCATATTCAAGGTTGTATGTTTTATGGACAGCCTGAGCCACCTGCCCCTTGTACTTGTCCATTAAGACAAGCTTGGGGAAGTTTAGATGCTTTAATTGGGAGATTAAGAGCTGCTTATGAAGAAAATGGTGGTTCACCAGAGACTAATCCTTTTGCTAGTGGTGCAATTAGGGTTTATCTTAGGGAGGTTAGGGAATGTCAAGCTAAAGCAAGAGGAATTCCTTACAAAAAGAAGAAGAAGAAAATTACTTCTACTAGTCAAATCAAAGGAGGTGATCAAGATTCTACTTCAAGCTCCATGATGCACTTT

Protein sequence

MDFHQFDQLFHILNLTIKKEKKMSIEGSISKDFSEGSSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSSMMHF

Homology

[Close]

BLAST of CcUC07G131260 vs. NCBI nr
Match: XP_038887380.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Benincasa hispida])

HSP 1 Score: 340.9 bits (873), Expect = 7.8e-90
Identity = 174/189 (92.06%), Postives = 178/189 (94.18%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGG-SHGS-TPSRYESQKRRDWNTFCQYLKNQRPPVP 82
           MSIEGSISKDF EGSSSSSSPQ SGG SHGS TPSRYESQKRRDWNTFCQYLKNQRPPVP
Sbjct: 1   MSIEGSISKDFYEGSSSSSSPQASGGSSHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVP 60

Query: 83  LSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLR 142
           LSHCN NQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPP PCTCPLRQAWGSLDALIGRLR
Sbjct: 61  LSHCNSNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPNPCTCPLRQAWGSLDALIGRLR 120

Query: 143 AAYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGG--DQD 202
           AAYEENGGS ETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK TSTSQ KGG  DQ+
Sbjct: 121 AAYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTSTSQPKGGGDDQE 180

Query: 203 STSSSMMHF 208
           S+S+SMMHF
Sbjct: 181 SSSTSMMHF 189

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BLAST of CcUC07G131260 vs. NCBI nr
Match: XP_008455303.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo])

HSP 1 Score: 334.0 bits (855), Expect = 9.5e-88
Identity = 168/189 (88.89%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGGSHGS-TPSRYESQKRRDWNTFCQYLKNQRPPVPL 82
           MSIEGSISKDFSEGSSSSS     G +HGS TPSRYESQKRRDWNTFCQYLKNQRPPVPL
Sbjct: 1   MSIEGSISKDFSEGSSSSSG---GGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPL 60

Query: 83  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 142
           SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA
Sbjct: 61  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 120

Query: 143 AYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGG---DQD 202
           AYEENGGS ETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK ++ +Q KGG   DQD
Sbjct: 121 AYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSTINQTKGGGHDDQD 180

Query: 203 STSSSMMHF 208
           S+S+SMMHF
Sbjct: 181 SSSTSMMHF 186

[Close]

BLAST of CcUC07G131260 vs. NCBI nr
Match: KAA0031563.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo var. makuwa] >TYK07014.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo var. makuwa])

HSP 1 Score: 332.8 bits (852), Expect = 2.1e-87
Identity = 170/190 (89.47%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGGSHGS-TPSRYESQKRRDWNTFCQYLKNQRPPVPL 82
           MSIEGSISKDFSEGSSSSS     G +HGS TPSRYESQKRRDWNTFCQYLKNQRPPVPL
Sbjct: 1   MSIEGSISKDFSEGSSSSSG---GGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPL 60

Query: 83  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 142
           SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA
Sbjct: 61  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 120

Query: 143 AYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITST-SQIKGG---DQ 202
           AYEENGGS ETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK +ST +Q KGG   DQ
Sbjct: 121 AYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSSTINQTKGGGHDDQ 180

Query: 203 DSTSSSMMHF 208
           DS+S+SMMHF
Sbjct: 181 DSSSTSMMHF 187

[Close]

BLAST of CcUC07G131260 vs. NCBI nr
Match: XP_004136831.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus] >KGN43628.1 hypothetical protein Csa_017146 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 4.4e-85
Identity = 169/191 (88.48%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 23  MSIEG-SISKDFSEGSSSSSSPQPSGGSHGS-TPSRYESQKRRDWNTFCQYLKNQRPPVP 82
           MSIEG SISKDFSEGSSSSS     G +HGS TPSRYESQKRRDWNTFCQYLKNQRPPVP
Sbjct: 1   MSIEGSSISKDFSEGSSSSSG---GGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVP 60

Query: 83  LSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLR 142
           LSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLR
Sbjct: 61  LSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLR 120

Query: 143 AAYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGG----D 202
           AAYEENGGS ETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK T+ SQ KG     D
Sbjct: 121 AAYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKK-TTISQTKGSGGHDD 180

Query: 203 QDSTSSSMMHF 208
           QDS+S+SMMHF
Sbjct: 181 QDSSSTSMMHF 187

[Close]

BLAST of CcUC07G131260 vs. NCBI nr
Match: XP_022930813.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata])

HSP 1 Score: 319.3 bits (817), Expect = 2.4e-83
Identity = 158/185 (85.41%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLS 82
           MS EG+ +KDFSEGSSS+SSPQP     GS PSRYESQKRRDWNTFCQYLKNQRPPVPLS
Sbjct: 1   MSFEGA-TKDFSEGSSSTSSPQPG----GSIPSRYESQKRRDWNTFCQYLKNQRPPVPLS 60

Query: 83  HCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA 142
           HC+CN VLEFLRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  HCSCNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 143 YEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSS 202
           YEE+GGSPETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK T+T+Q KG +    S+
Sbjct: 121 YEESGGSPETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAED---ST 177

Query: 203 SMMHF 208
           SMMHF
Sbjct: 181 SMMHF 177

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BLAST of CcUC07G131260 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 9.6e-75
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 44  QPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRYLDQFGKTK 103
           + SG     TPSRYESQKRRDWNTF QYLKNQRPPVP+SHC+CN VL+FLRYLDQFGKTK
Sbjct: 13  ESSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 72

Query: 104 VHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFASGAIRVY 163
           VH+ GCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG PETNPFASGAIRVY
Sbjct: 73  VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 132

Query: 164 LREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSS 204
           LREVRECQAKARGIPYKKKKKK   T ++ GG +DS+SSS
Sbjct: 133 LREVRECQAKARGIPYKKKKKK-KPTPEMGGGREDSSSSS 171

[Close]

BLAST of CcUC07G131260 vs. ExPASy Swiss-Prot
Match: A2XED8 (Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-59
Identity = 112/175 (64.00%), Postives = 132/175 (75.43%), Query Frame = 0


Query: 41  SSPQPSGGSHGSTP------------SRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQ 100
           S P PS  + G  P            SRYESQKRRDWNTF QYL+N RPP+ L+ C+   
Sbjct: 4   SGPGPSSAAAGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAH 63

Query: 101 VLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG 160
           V+EFLRYLDQFGKTKVH  GC FYGQP PP PC CPLRQAWGSLDALIGRLRAAYEE+GG
Sbjct: 64  VIEFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGG 123

Query: 161 SPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSS 204
           +PE+NPFA+ A+R+YLREVR+ QAKARGIPY+KKK+K +  +Q  G +   +SS+
Sbjct: 124 TPESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQAAQPAGVEPSGSSSA 178

[Close]

BLAST of CcUC07G131260 vs. ExPASy Swiss-Prot
Match: Q941W1 (Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-59
Identity = 112/175 (64.00%), Postives = 132/175 (75.43%), Query Frame = 0


Query: 41  SSPQPSGGSHGSTP------------SRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQ 100
           S P PS  + G  P            SRYESQKRRDWNTF QYL+N RPP+ L+ C+   
Sbjct: 4   SGPGPSSAAAGGAPAVAAAPQPPAQLSRYESQKRRDWNTFLQYLRNHRPPLTLARCSGAH 63

Query: 101 VLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG 160
           V+EFLRYLDQFGKTKVH  GC FYGQP PP PC CPLRQAWGSLDALIGRLRAAYEE+GG
Sbjct: 64  VIEFLRYLDQFGKTKVHASGCAFYGQPSPPGPCPCPLRQAWGSLDALIGRLRAAYEESGG 123

Query: 161 SPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSS 204
           +PE+NPFA+ A+R+YLREVR+ QAKARGIPY+KKK+K +  +Q  G +   +SS+
Sbjct: 124 TPESNPFAARAVRIYLREVRDSQAKARGIPYEKKKRKRSQAAQPAGVEPSGSSSA 178

[Close]

BLAST of CcUC07G131260 vs. ExPASy Swiss-Prot
Match: A2XVI8 (Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.3e-59
Identity = 110/171 (64.33%), Postives = 130/171 (76.02%), Query Frame = 0


Query: 36  GSSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRY 95
           GSSSS+S    G     +PSRYE+QKRRDWNTF QYL+N RPP+ L+ C+   VLEFLRY
Sbjct: 21  GSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRY 80

Query: 96  LDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPF 155
           LDQFGKTKVH   C F+G P PPAPC CPLRQAWGSLDAL+GRLRAA+EENGG PE+NPF
Sbjct: 81  LDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPF 140

Query: 156 ASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSSMMH 207
           A+ A+R+YLREVRE QA+ARG+ Y+KKK+K     Q++GGD         H
Sbjct: 141 AARAVRLYLREVREHQARARGVSYEKKKRKKPQQQQLQGGDSSGLHGHQHH 191

[Close]

BLAST of CcUC07G131260 vs. ExPASy Swiss-Prot
Match: Q7XRS1 (Protein G1-like4 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L4 PE=1 SV=2)

HSP 1 Score: 229.6 bits (584), Expect = 3.3e-59
Identity = 110/171 (64.33%), Postives = 130/171 (76.02%), Query Frame = 0


Query: 36  GSSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRY 95
           GSSSS+S    G     +PSRYE+QKRRDWNTF QYL+N RPP+ L+ C+   VLEFLRY
Sbjct: 21  GSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLAQCSGAHVLEFLRY 80

Query: 96  LDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPF 155
           LDQFGKTKVH   C F+G P PPAPC CPLRQAWGSLDAL+GRLRAA+EENGG PE+NPF
Sbjct: 81  LDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGRPESNPF 140

Query: 156 ASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSSMMH 207
           A+ A+R+YLREVRE QA+ARG+ Y+KKK+K     Q++GGD         H
Sbjct: 141 AARAVRLYLREVREHQARARGVSYEKKKRKKPQQQQLQGGDSSGLHGHQHH 191

[Close]

BLAST of CcUC07G131260 vs. ExPASy TrEMBL
Match: A0A1S3C1B9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo OX=3656 GN=LOC103495500 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.6e-88
Identity = 168/189 (88.89%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGGSHGS-TPSRYESQKRRDWNTFCQYLKNQRPPVPL 82
           MSIEGSISKDFSEGSSSSS     G +HGS TPSRYESQKRRDWNTFCQYLKNQRPPVPL
Sbjct: 1   MSIEGSISKDFSEGSSSSSG---GGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPL 60

Query: 83  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 142
           SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA
Sbjct: 61  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 120

Query: 143 AYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGG---DQD 202
           AYEENGGS ETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK ++ +Q KGG   DQD
Sbjct: 121 AYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSTINQTKGGGHDDQD 180

Query: 203 STSSSMMHF 208
           S+S+SMMHF
Sbjct: 181 SSSTSMMHF 186

[Close]

BLAST of CcUC07G131260 vs. ExPASy TrEMBL
Match: A0A5D3C6X1 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003300 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 1.0e-87
Identity = 170/190 (89.47%), Postives = 176/190 (92.63%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGGSHGS-TPSRYESQKRRDWNTFCQYLKNQRPPVPL 82
           MSIEGSISKDFSEGSSSSS     G +HGS TPSRYESQKRRDWNTFCQYLKNQRPPVPL
Sbjct: 1   MSIEGSISKDFSEGSSSSSG---GGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVPL 60

Query: 83  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 142
           SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA
Sbjct: 61  SHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRA 120

Query: 143 AYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITST-SQIKGG---DQ 202
           AYEENGGS ETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK +ST +Q KGG   DQ
Sbjct: 121 AYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTSSTINQTKGGGHDDQ 180

Query: 203 DSTSSSMMHF 208
           DS+S+SMMHF
Sbjct: 181 DSSSTSMMHF 187

[Close]

BLAST of CcUC07G131260 vs. ExPASy TrEMBL
Match: A0A0A0K2D1 (ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048120 PE=3 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85
Identity = 169/191 (88.48%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 23  MSIEG-SISKDFSEGSSSSSSPQPSGGSHGS-TPSRYESQKRRDWNTFCQYLKNQRPPVP 82
           MSIEG SISKDFSEGSSSSS     G +HGS TPSRYESQKRRDWNTFCQYLKNQRPPVP
Sbjct: 1   MSIEGSSISKDFSEGSSSSSG---GGSTHGSTTPSRYESQKRRDWNTFCQYLKNQRPPVP 60

Query: 83  LSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLR 142
           LSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLR
Sbjct: 61  LSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLR 120

Query: 143 AAYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGG----D 202
           AAYEENGGS ETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK T+ SQ KG     D
Sbjct: 121 AAYEENGGSQETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKK-TTISQTKGSGGHDD 180

Query: 203 QDSTSSSMMHF 208
           QDS+S+SMMHF
Sbjct: 181 QDSSSTSMMHF 187

[Close]

BLAST of CcUC07G131260 vs. ExPASy TrEMBL
Match: A0A6J1EWG4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 GN=LOC111437182 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 158/185 (85.41%), Postives = 169/185 (91.35%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLS 82
           MS EG+ +KDFSEGSSS+SSPQP     GS PSRYESQKRRDWNTFCQYLKNQRPPVPLS
Sbjct: 1   MSFEGA-TKDFSEGSSSTSSPQPG----GSIPSRYESQKRRDWNTFCQYLKNQRPPVPLS 60

Query: 83  HCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA 142
           HC+CN VLEFLRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  HCSCNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 143 YEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSS 202
           YEE+GGSPETNPFASGAIRVYLR+VRECQAKARGIPYKKKKKK T+T+Q KG +    S+
Sbjct: 121 YEESGGSPETNPFASGAIRVYLRDVRECQAKARGIPYKKKKKKTTTTNQSKGAED---ST 177

Query: 203 SMMHF 208
           SMMHF
Sbjct: 181 SMMHF 177

[Close]

BLAST of CcUC07G131260 vs. ExPASy TrEMBL
Match: A0A6J1JNV9 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=LOC111486170 PE=3 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.9e-81
Identity = 157/185 (84.86%), Postives = 166/185 (89.73%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLS 82
           MS EG  SKDFSEGSSS+SSPQP     G  PSRYESQKRRDWNTFCQYLKNQRPPVPLS
Sbjct: 1   MSFEGG-SKDFSEGSSSTSSPQPG----GPIPSRYESQKRRDWNTFCQYLKNQRPPVPLS 60

Query: 83  HCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA 142
           HC+CN VLEFLRYLDQFGKTKVH+QGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA
Sbjct: 61  HCSCNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAA 120

Query: 143 YEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSS 202
           YEE+GGSPETNPFASGAIRVYLR+VRECQAKARGIPY KKKKK T+T+Q KG +    S+
Sbjct: 121 YEESGGSPETNPFASGAIRVYLRDVRECQAKARGIPY-KKKKKTTTTNQSKGAED---ST 176

Query: 203 SMMHF 208
           SMMHF
Sbjct: 181 SMMHF 176

[Close]

BLAST of CcUC07G131260 vs. TAIR 10
Match: AT2G42610.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 281.2 bits (718), Expect = 6.8e-76
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 44  QPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRYLDQFGKTK 103
           + SG     TPSRYESQKRRDWNTF QYLKNQRPPVP+SHC+CN VL+FLRYLDQFGKTK
Sbjct: 13  ESSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 72

Query: 104 VHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFASGAIRVY 163
           VH+ GCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG PETNPFASGAIRVY
Sbjct: 73  VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 132

Query: 164 LREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSS 204
           LREVRECQAKARGIPYKKKKKK   T ++ GG +DS+SSS
Sbjct: 133 LREVRECQAKARGIPYKKKKKK-KPTPEMGGGREDSSSSS 171

[Close]

BLAST of CcUC07G131260 vs. TAIR 10
Match: AT2G42610.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 281.2 bits (718), Expect = 6.8e-76
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 44  QPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRYLDQFGKTK 103
           + SG     TPSRYESQKRRDWNTF QYLKNQRPPVP+SHC+CN VL+FLRYLDQFGKTK
Sbjct: 13  ESSGSEPPVTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFLRYLDQFGKTK 72

Query: 104 VHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFASGAIRVY 163
           VH+ GCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGG PETNPFASGAIRVY
Sbjct: 73  VHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETNPFASGAIRVY 132

Query: 164 LREVRECQAKARGIPYKKKKKKITSTSQIKGGDQDSTSSS 204
           LREVRECQAKARGIPYKKKKKK   T ++ GG +DS+SSS
Sbjct: 133 LREVRECQAKARGIPYKKKKKK-KPTPEMGGGREDSSSSS 171

[Close]

BLAST of CcUC07G131260 vs. TAIR 10
Match: AT1G78815.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 225.7 bits (574), Expect = 3.4e-59
Identity = 114/187 (60.96%), Postives = 135/187 (72.19%), Query Frame = 0


Query: 23  MSIEGSISKDFSEGSSS-SSSPQPSGGSHGSTP-----SRYESQKRRDWNTFCQYLKNQR 82
           M+   +  K  +EGSS   S PQP      S P     SRYESQKRRDWNTFCQYL+NQ+
Sbjct: 1   MASHSNKGKGIAEGSSQPQSQPQPQPHQPQSPPNPPALSRYESQKRRDWNTFCQYLRNQQ 60

Query: 83  PPVPLSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALI 142
           PPV +S C  N +L+FL+YLDQFGKTKVHI GC+F+GQ EP   C CPL+QAWGSLDALI
Sbjct: 61  PPVHISQCGSNHILDFLQYLDQFGKTKVHIHGCVFFGQVEPAGQCNCPLKQAWGSLDALI 120

Query: 143 GRLRAAYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKKITSTSQIKGGD 202
           GRLRAA+EENGG PE NPFA G IRV+LREVR+ QAKARG+PYKK+KK+           
Sbjct: 121 GRLRAAFEENGGLPERNPFAGGGIRVFLREVRDSQAKARGVPYKKRKKRKKRNPMKSHDG 180

Query: 203 QDSTSSS 204
           +D T+ +
Sbjct: 181 EDGTTGT 187

[Close]

BLAST of CcUC07G131260 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 224.9 bits (572), Expect = 5.8e-59
Identity = 109/149 (73.15%), Postives = 124/149 (83.22%), Query Frame = 0


Query: 37  SSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQYLKNQRPPVPLSHCNCNQVLEFLRYL 96
           ++SSSS   SGGS  +  SRYE+QKRRDWNTF QYL+N RPP+ LS C+   VLEFLRYL
Sbjct: 29  TTSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYL 88

Query: 97  DQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPETNPFA 156
           DQFGKTKVH   C F+G P PPAPC CPLRQAWGSLDALIGRLRAA+EENGGSPETNPF 
Sbjct: 89  DQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFG 148

Query: 157 SGAIRVYLREVRECQAKARGIPYKKKKKK 186
           + A+R+YLREVR+ QAKARGI Y+KKK+K
Sbjct: 149 ARAVRLYLREVRDSQAKARGISYEKKKRK 177

[Close]

BLAST of CcUC07G131260 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 223.4 bits (568), Expect = 1.7e-58
Identity = 110/174 (63.22%), Postives = 130/174 (74.71%), Query Frame = 0


Query: 12  ILNLTIKKEKKMSIEGSISKDFSEGSSSSSSPQPSGGSHGSTPSRYESQKRRDWNTFCQY 71
           + NL I      S+ G+   + ++  SSSSSP        +  SRYE+QKRRDWNTF QY
Sbjct: 17  VTNLNIISNNSSSVTGATGGEATQPLSSSSSP-------SANSSRYENQKRRDWNTFGQY 76

Query: 72  LKNQRPPVPLSHCNCNQVLEFLRYLDQFGKTKVHIQGCMFYGQPEPPAPCTCPLRQAWGS 131
           L+N RPP+ LS C+   VLEFLRYLDQFGKTKVH   C FYG P PPAPC CPLRQAWGS
Sbjct: 77  LRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGS 136

Query: 132 LDALIGRLRAAYEENGGSPETNPFASGAIRVYLREVRECQAKARGIPYKKKKKK 186
           LDALIGRLRAA+EENGG PETNPF + A+R+YLREVR+ Q+KARG+ Y+KKK+K
Sbjct: 137 LDALIGRLRAAFEENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRK 183

The following BLAST results are available for this feature:

BLAST of CcUC07G131260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887380.1	7.8e-90	92.06	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Benincasa hispida]	[more]
XP_008455303.1	9.5e-88	88.89	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo]	[more]
KAA0031563.1	2.1e-87	89.47	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis melo var. makuwa] >TYK07014...	[more]
XP_004136831.1	4.4e-85	88.48	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 [Cucumis sativus] >KGN43628.1 hypoth...	[more]
XP_022930813.1	2.4e-83	85.41	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata]	[more]

BLAST of CcUC07G131260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	9.6e-75	84.38	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
A2XED8	1.5e-59	64.00	Protein G1-like7 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_10694 PE=3 SV=1	[more]
Q941W1	1.5e-59	64.00	Protein G1-like7 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L7 PE=1 SV=1	[more]
A2XVI8	3.3e-59	64.33	Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1	[more]
Q7XRS1	3.3e-59	64.33	Protein G1-like4 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L4 PE=1 SV=2	[more]

BLAST of CcUC07G131260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C1B9	4.6e-88	88.89	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo OX=3656 GN=LOC103495...	[more]
A0A5D3C6X1	1.0e-87	89.47	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0K2D1	2.1e-85	88.48	ALOG domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G048120 PE=3 S...	[more]
A0A6J1EWG4	1.2e-83	85.41	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JNV9	1.9e-81	84.86	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CcUC07G131260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42610.1	6.8e-76	84.38	Protein of unknown function (DUF640)	[more]
AT2G42610.2	6.8e-76	84.38	Protein of unknown function (DUF640)	[more]
AT1G78815.1	3.4e-59	60.96	Protein of unknown function (DUF640)	[more]
AT3G23290.2	5.8e-59	73.15	Protein of unknown function (DUF640)	[more]
AT2G31160.1	1.7e-58	63.22	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 52..169 e-value: 1.7E-64 score: 215.7
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 56..183 score: 79.016273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..207
None	No IPR available	PANTHER	PTHR31165:SF72	DUF640 FAMILY PROTEIN	coord: 27..207
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 27..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G131260.1	CcUC07G131260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus