CcUC07G131140 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G131140
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr07: 2723122 .. 2727148 (+)
RNA-Seq ExpressionCcUC07G131140
SyntenyCcUC07G131140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTTTGAACCCGTAATTTCTGAGGTTACGAGCCTTGCGAGCTATCAAGCTGCTCGATGGGTGATGGTTTGTTCCATAGTTACAAAGGACGGAGGAGATGAGATTTTTTTTTTTAATGAAATGATTTAATTAATTATGTACGACTATAAAGCTATTGATAAATATATATAGGATTTTATATTTACCTAGTCAGTTATCGTTGCTGGAGATTGACTCGGGAAGCTTGAAAGTTGGAGGCTTGTCAACACCTCGTCTAGAGTACTCTCTCCATCGTCGAGCAGCAGCTGCAGCTCGCTTCGCCCGTTCATTTGTTTCCTCCTCTGCAGCGTCTTTTAGATCGTTTATTCATTTGAACAAGGGAATTAGTTATGTACATTAATATGTCGATATCAATATTTCAATAAACCGAAATACTCGACGTTGGATGAAGGGTAGATATAAAGAACTAGAGGATTAGAGCAACATTTAAGATAAGCTTACAAACACTGCTACTCCTACCTATAAGTTCTTTTATTTTGTTATTCATTTCTTAACCGTATTTTCAGAAACCAAGTTAAGTTTTAAAAACTAAAATATATTTATATATTATAAATTATGCCTTTGTTTTTTATACTTCGACTAAAGAATTCAAATATTTTTAAGAAGTATGAAAATCATGATATGACGATAAAGAACCTAAATTATAATTCAAAACTTTCATGTTTCTGTCTAATATATGTTTCTGTCTAATATGTCTCTGAAATTTAAAGTGTCTAAATCATCAAAAATTTTAATTTTGCATCTAATAAATTCATGACACATTTGATGCATCTCTTGACTATTAATTTTGTGTCTAATAGACCAACAAATTCAAAACTATAAATAAACTTAGAAACTAATGAAGATTACTATTCAATCATTACCCGAATTTCTTTGATCTTTAGGCCTCCCCCAAAGATTGCTCCAGTATGAATCATCCCTATCGGAACTCTTCTTCTTCATCATCCTCACTTTTGCTTTTTCCTGCAAAAGAATGAAATTTATAGAGCTCCAGATATTAGAAAGCTGAAATCAAGAGCGAAAAAGTTATGCGCACGTCGGTATAAAACCTACCAAGACTTTTGCTTGCCTCTTTTCCCATCGAGAACTTGCCTGAAACATTAGTAGCAACGAAAAAAGTTTAATAAGGGCAGGAAGTTTCGAATCATAGACCTCTTGGTCACAAACACATCTATATGCAAATTGGGTCCTACTCCTTTGACAAAAAAATTTAATTATTATACTTAACAAATGGAGACTTAAATGCGTTACTTCCATTTTCTTTTATGTCTTCCATTTTGAGCGAGGTCTAAAAAAGATTAGGTTGGTTTGAGATTGTTGTAGCTTTTTAAATAATTGCAATGCGAAGAAATTAGTATCAAGTAGATTTCAAACTCAAATGAGGAGAAGTAAGATAAATTAGTGATAAAATAGAAATTTTTAGGAGTAAGTTAGAACATGCATAAAATTATTTGACTAGATATTTTGAGCCAAGGTAATTGAAAAGGTGATTTTCATTAAATTAATTAGGTTTACTAAACACTAAAAACAAATAAGATTCCCTCCTAATCAATGATTATACGTAGGAAAAATCAATCCCAAACACAATCTTAAAATGTTCATACCATTCTGAAAACATCCACAGCTGATGATCCCATTCCAGAAAGCATAAACGCAACCTGGCCATAAACATTCCAATTAGAAATCTTGATTTCTAAAAAGAAGAAATGAATATAAATCCTTCCTCTAGAAACTGCAAATTGCTTAACGAAGAATCAAACTTACCAGTTGAAAATGAGAGGAAGGAATTGATGAATTGTTCAAACTTACAATTCATTAACAGTCTAATAAGAAAGTGAAAATCTAGGAAAAACAAAGCTATGGAGATTGCTCTGCATTACATACATTCACTCGTTCGACCCTGCGCATTTCATCTTCAAGCAAAGATAATTGTGCAGCTGAAGTCCAATGGATGCAATCGACTGGACTGGCAAGAGAGGAGAAAAACATTAGTCAATTGTATCATCAGGCAGATTTTAAGCCTGAATATGATAAATCGGTAATTGAAATAGGTTGACGAATGCCCGATTGAAGAAGAGAAACATTTCAAATGGGCTGTTGAATTCAAACTCGTTGTAAAAATGATGGATATCGAGGAAATAAATTGGTCAAAGCATACGATCTTGAACATTGTCTTCAACTATCATTTTCTTAACCAAATTATACCATGAATGCTTGTACTCTAGTTCTGAATTAGAGTACAACTCAAAAATAAATCTAATAAAAAGTTTTTAACAATTCCCAAGCTATGAACCACGAGATTTGGAGATTAAAGAACGGTCAGTTAAGATTCAATCGGGCATAAAGTGAACTTACCAACTATCGATTGCTTCTTGAACCCGTTGTTGATTCCCACACTGGCTGTACACACGAGCTCGTCCGAAATCTTCTTCAATTACGAAGACATCAGGGGCCACATTGGCACAATTTTTGCAGCCTGGAAATAAGTTAGAAAAATCTTCATTGTAAAGGCCGAAAGAGCAATCTTTTTAGGTAAATTGTTAGGATGTCACTTCTGGTAACCAAACCAATAGGTTGTAAATAACTTCGAAAAGTTTTTGAAAGATGTTCTAGTGGTACTTATGGAGAAATTACCCATATCAACAACTACAAACAGATGACAATGGAAAACTCATTGCAACTTCGAGAGACCTAACCGTTAGTTTGGACTAACTTTTGAAGGAAAAAAGAAAAAAAAAAAATGGAGTGAAAACAATGGGAAGAAGCACTAATTAAGTGCTTATGAGGTGTTCTTTGAATTTTCAAAATTATTACGAAAATTTGAAAAAGTAGACTAAAAGCACATTTCACCTTTTCAAAAAACAACTCAAACTCACCAAACCAAGAGAATTACAAGGGTAGAATAACATTGGAGATAACTCTCACGTACCTATACAGCTGAATTCATCAACAAAAGCAAGATCCTTTGTGCTTGAATCATCTATAAAAGGGTTAATTGCAGTCAAAGCATATCCATGAATTTCATCATAAACCATCCGCTGAACTGGGTCACTAAGCACCTGCATGACAAAGGTCGGGAAAAATCTATTTTCTAAGACTAAATATGGGTCGTCTGAATTCTTTACAGTCCGACTCGAGAGGCCTGGTATGTAACATTTCAATTACATGAGGGAAAAACTAAATTTAGTGGTGGTAACTCGTTGGCCCAAGACCATAGTCCAATGTTGACCTCCTTGAGGGTGCATGAGCAACGCCCTCCTTATATGGATGGATTTTGTTAAGCATTTGTATATGTATGTATATGTATGTGTGTGTCCATCTATAGGTTCAAAAGCACTTTCCACTCTTGTACTTTAATTGACTAGATTGTTTAGTCCTAAACTTTAATTTGTAATGATTTAATCCTCTAATTTTGAAATCGTAACAATTTAATCTCTAAACTTTAATGTGTAATAATTTAGTTTATGTAGTTCAAAATTTCTAACAATTAGTCTCCACCGTACAAAATTTCATCAAAACTCCATTAAATCTTAATAACATTTTTTACAATAGGAAATAAATTGTTATAAACTTCAAACTATTACATGCTAAGATTCAAGGATTAAATTGTTAACAATTTGAAAGTACATGAGTTAATTTGTTACAAATTAAGGTTGGATAACTAAATTGTTTCCTGACGAATGTTTTTTAACCACATATATATTGTTTTCGGAAACTCTCCTTCCCATTTTTCATAATGGTGGATTCTTCTTCTACTCTGTTCATGATTGTTTCCAACTTTATTAGTCGTTTTCTAAATACAAAGCTTAAAGCATCTAGCATTTAGCGTCCTTTGAATTTGAAATCCTACCTCATAGACTTCGTTAATGAACATGCAGAAATTCGTGGTGTCGGGATCATCGCCACTCAAATCAGGATGGCACTCTTTCATACAATTATAATAGGCCTTCTTAATCTGTTCCGGGCTGGCATCTGGAAGCTATAA

mRNA sequence

ATGGGTCAGTTATCGTTGCTGGAGATTGACTCGGGAAGCTTGAAAGTTGGAGGCTTGTCAACACCTCGTCTAGAGTACTCTCTCCATCGTCGAGCAGCAGCTGCAGCTCGCTTCGCCCGTTCATTTGTTTCCTCCTCTGCAGCGTCTTTTAGATCGTTTATTCATTTGAACAAGGGAATTAGTTATGAAAAACAAAGCTATGGAGATTGCTCTGCATTACATACATTCACTCGTTCGACCCTGCGCATTTCATCTTCAAGCAAAGATAATTGTGCAGCTGAAGTCCAATGGATGCAATCGACTGGACTGGCAAGAGAGGAGAAAAACATTAGTCAATTGTATCATCAGGCAGATTTTAAGCCTGAATATGATAAATCGGTTGACGAATGCCCGATTGAAGAAGAGAAACATTTCAAATGGGCTGTTGAATTCAAACTCGTTTCCGACTCGAGAGGCCTGCGTCCTTTGAATTTGAAATCCTACCTCATAGACTTCGTTAATGAACATGCAGAAATTCGTGGTGTCGGGATCATCGCCACTCAAATCAGGATGGCACTCTTTCATACAATTATAATAGGCCTTCTTAATCTGTTCCGGGCTGGCATCTGGAAGCTATAA

Coding sequence (CDS)

ATGGGTCAGTTATCGTTGCTGGAGATTGACTCGGGAAGCTTGAAAGTTGGAGGCTTGTCAACACCTCGTCTAGAGTACTCTCTCCATCGTCGAGCAGCAGCTGCAGCTCGCTTCGCCCGTTCATTTGTTTCCTCCTCTGCAGCGTCTTTTAGATCGTTTATTCATTTGAACAAGGGAATTAGTTATGAAAAACAAAGCTATGGAGATTGCTCTGCATTACATACATTCACTCGTTCGACCCTGCGCATTTCATCTTCAAGCAAAGATAATTGTGCAGCTGAAGTCCAATGGATGCAATCGACTGGACTGGCAAGAGAGGAGAAAAACATTAGTCAATTGTATCATCAGGCAGATTTTAAGCCTGAATATGATAAATCGGTTGACGAATGCCCGATTGAAGAAGAGAAACATTTCAAATGGGCTGTTGAATTCAAACTCGTTTCCGACTCGAGAGGCCTGCGTCCTTTGAATTTGAAATCCTACCTCATAGACTTCGTTAATGAACATGCAGAAATTCGTGGTGTCGGGATCATCGCCACTCAAATCAGGATGGCACTCTTTCATACAATTATAATAGGCCTTCTTAATCTGTTCCGGGCTGGCATCTGGAAGCTATAA

Protein sequence

MGQLSLLEIDSGSLKVGGLSTPRLEYSLHRRAAAAARFARSFVSSSAASFRSFIHLNKGISYEKQSYGDCSALHTFTRSTLRISSSSKDNCAAEVQWMQSTGLAREEKNISQLYHQADFKPEYDKSVDECPIEEEKHFKWAVEFKLVSDSRGLRPLNLKSYLIDFVNEHAEIRGVGIIATQIRMALFHTIIIGLLNLFRAGIWKL
Homology
[Close]
BLAST of CcUC07G131140 vs. NCBI nr
Match: KAF1885076.1 (hypothetical protein Lal_00028965 [Lupinus albus])

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-04
Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 3  QLSLL-EIDSGSLKVGGLSTPRLEYSLHRRAAAAARFARSFVSSSAASFRSFIHL 57
          QLSLL E  SGSL VG LSTP LEYSLH  AAAAA FA SF SSSA  F SF+ L
Sbjct: 9  QLSLLMEAPSGSLNVGALSTPFLEYSLHLLAAAAALFALSFTSSSANLF-SFLRL 62

[Close]
BLAST of CcUC07G131140 vs. ExPASy TrEMBL
Match: A0A6A5NCJ2 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00028965 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-04
Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 0 

Query: 3  QLSLL-EIDSGSLKVGGLSTPRLEYSLHRRAAAAARFARSFVSSSAASFRSFIHL 57
          QLSLL E  SGSL VG LSTP LEYSLH  AAAAA FA SF SSSA  F SF+ L
Sbjct: 9  QLSLLMEAPSGSLNVGALSTPFLEYSLHLLAAAAALFALSFTSSSANLF-SFLRL 62

The following BLAST results are available for this feature:
BLAST of CcUC07G131140 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF1885076.13.8e-0470.91hypothetical protein Lal_00028965 [Lupinus albus][more]
BLAST of CcUC07G131140 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC07G131140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A5NCJ21.8e-0470.91Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00028965 PE=4 SV=1[more]
BLAST of CcUC07G131140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G131140.1CcUC07G131140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane