CcUC07G129940 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G129940
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr07: 1527633 .. 1530562 (-)
RNA-Seq ExpressionCcUC07G129940
SyntenyCcUC07G129940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTGCTTCCCCATCCAGGCTTAAGGTTCCATATCTGCAAAAACATGGAGCAAGGATGATAATGCATCGATGGCAAGCCATATTTAAGTTTAAGCACAGAAGTAAACTAATGAGAATGCAGAAAAGCTCCATCTGGGGGAAGCAAGAACTAACAAACAGTTTCAAGTATTAAAATTAACTTCCAAGAGAAATGAGTCAGGATGACTATAGACAATACCTGAATAGAACCATCACCTATGCCACCTGCGATGCTTTTTCCTTCATGATCCCAAGCACATGTTGTCACGGGAATTCTTCCAGGCCTAGCCAGCTTTGGTTTGATAACCTACACATTGAGTAACCCACAGGCATTAATGGAAGGCCTTGGCTCATTATGCACCTTCAGCAGCATACATTATGATTTGTTAATGCAAATTGTGCCATGTTGGTTAAAAACAGGAATGACGAAATAATAGCATTCAACAGAAAAAGAAGGAAGTTCTAAAAGGAAATTATCTAATTACAGATGCAAGAATTTCTTTTCCAACCCTCCTACCTGTGTAACAAAATAACAAATAATGGAAAGGGGAAAACTTGCGGTAGAACAATTATATGAAGATACTGCAGGATTTCTGGTACACATTGAAAAATTTTCATGTTATGTAACTGCAACAAATTTATAGAGAAATGAAGACCTGCTTTTGACTCTTGAAGTCATTTACATCCCAAATTCGTAGAGATCCATCTTCGGATGATGTCAAAATTGTCTCTTTAGTTTTAGGGTGCCACTCTCCACAAGTCAGTCCAGATATGTGCCCTTTAGTGTTCTTCAGATCACGTATATACATATCTCCCTTCATAAACTCTCCTAAAGTAAGTCCATCACGGTCATAAATCTGAAATGCCAATAAGATAAACATTACTTAAGACTAGATGCTTCCATAAGCTACAGGCTCATACAACAATTAAGAATCTTCATTCAGCACCTTGGCTTGAGCTGAGCCTGTCACACACATAAAGCGGTCAGCCGTTGGACTCCAGCTAAGATTACGAATTTGATGACCTTCAAATGGTTCCAACTGTCTGAAGGATTGCAAACGAGAATTCATCCCTTGAAAGTCATACATTCGTACTGTATAGTCATAACTACCAGAAAGAACTCTAGACCCAGTGTGGTCAACAGCAAGAGCAGAAACTACCTGTCAAAAATCAATTAAAATTAATATAAATGTTTAGGGCTTCTCAGAGTCACTACCATAACGCCAAGGCTCATGTTAAAAAGTAAATATGTACCAAAATCTAGTAACCATTAACTCTAACTGCCAACTGTAATCCACACTTTTTTTTTCCTTTTGTGTGTGTGTGTGTGTGTGTGTGTGGGGTGGTGGTGGTGGTGGGGGTTGGTGGGGGTTGGTTTCTTCTACCCCTGCCTTTTGGGTTTTAGCCCTTGGAATATGTATCTTCATTTTTAATCAGATATATATATGGACTGACAATGTTAGAAAACAATCATCTATCAGGTTGGATGTTCTGATCTTTCCAAAACAATATTTAACTTTCAACACTTCAAGATTAAATATCACATTGCCAGTTTGCCACTTAGTTCTCCCAGACTCTTTTGCAGTTTGCACCATCAACGCATTCAAAACAATTGGTGATACGAAAAACAACATCCCAAGACTCCTAAGCTTCTGAACATAATGCAAGCCCTTGAGGAATTGTTCTTGAAACTTACACTCACCTGGGAGAACAATAACAATGGAACCGCTTGCTAAAGCTATTTAAAACCATCTATTCACCGTTCTCTATGCTCCATGCATCTTGTTTCCATGTTCAAGAAGGATAACCTAATAATGCTTAAATTCGGATTGATATGGGGTGGGAAAAGAAAATAATCTTTGATTTGCACTCATACTTTCACCATAAACATCGCAAAATTGCCCATTAAATCCATGCAAAAGTCAAGCACAGTCAGTGAATGTGAACAATAGTTAGAGATCAAAATTATTTAAGCGAAACCCAAATTCAGTAGCTGGACTAATTCAAGCTACTTTGATATCCACTACTTGAAAACAAGCCAAGCCTGAACACTTTGAGGGGCCAAAACTAGAGGTACCAACAAAATAAGTTTTCGTTCTTTCCTGATTTGGGGCTATGAAGAAAATAAAAAGAAGCTGAATAGAGTGCAAAGTAGAGCAGCTCAAACCTTAGTATGGCCCTTGAGCACGATCTCGTTGCTCTGCGGAATTCGATACCGATTCTCCTCATATTCTTCCTCCCCCGCATCCGAATCCTCCAAATTCGAGCCCGGCGGCGGAGGTGGTGGTCCAATCATTTCACCATCGTCATCCCCATCATCATCTGAACCCTCACCGGGCGGCGGCGGCGGCGGAGGCCCAATGATCACATCATCATCATCATTCAATTTCGACTCAATGGGCGGGCGAGGCGGACCAATCTTCGGACCATCGTCAGCACCACTGTCACGCGTGATCCCACTAGGTCCAGAATCGCTCATAACAGGTGGGTTAGGGGTTTTGGAAGTGCGAAGTGAATTGAGCCAGGCTTTGGAGGAGGAAGAGATAGAAGGGAGGGCATTGTTATTCTGTGAGGAAGAAGATTTTTCTGGAATACTTACTGAATTGTTACGACGAGTGGTGTTATGGATGGCTTCGAGAGGGGTCTGCGCTTTCGATTGCTTCCCGAATGTAAGAGGAAATTGAGCTCTGATGCCACCGTATATCTCCGCTTCGTCCTCCATATTCTTCCGAAGAAACTTTCTTTTGTTCACCCTAGAGACGATATCAGTTCGAAAGCGAAATCGTCAATGGTGTATCTATCTACCGTCATCTGCCATTAACGAAAGCTAGAAAATTTGCACTTCTCTGCAGTCTGCCCTTGAGCTTGAGGAGGAAGGGAGAACGGTGAAGAGGACCGGCAATGGAGTCGGC

mRNA sequence

GCCTGCTTCCCCATCCAGGCTTAAGGTTCCATATCTGCAAAAACATGGAGCAAGGATGATAATGCATCGATGGCAAGCCATATTTAAGTTTAAGCACAGAAGTAAACTAATGAGAATGCAGAAAAGCTCCATCTGGGGGAAGCAAGAACTAACAAACAGTTTCAAGGTGCCACTCTCCACAAGTCAGTCCAGATATGTGCCCTTTAGTGTTCTTCAGATCACGGCTTCTCAGAGTCACTACCATAACGCCAAGGCTCATGTTAAAAAAGTGCAAAGTAGAGCAGCTCAAACCTTAGTATGGCCCTTGAGCACGATCTCGTTGCTCTGCGGAATTCGATACCGATTCTCCTCATATTCTTCCTCCCCCGCATCCGAATCCTCCAAATTCGAGCCCGGCGGCGGAGGTGGTGGTCCAATCATTTCACCATCGTCATCCCCATCATCATCTGAACCCTCACCGGGCGGCGGCGGCGGCGGAGGCCCAATGATCACATCATCATCATCATTCAATTTCGACTCAATGGGCGGGCGAGGCGGACCAATCTTCGGACCATCGTCAGCACCACTGTCACGCGTGATCCCACTAGGTCCAGAATCGCTCATAACAGGTGGGTTAGGGGTTTTGGAAGTGCGAAGTGAATTGAGCCAGGCTTTGGAGGAGGAAGAGATAGAAGGGAGGGCATTGTTATTCTGTGAGGAAGAAGATTTTTCTGGAATACTTACTGAATTGTTACGACGAGTGGTGTTATGGATGGCTTCGAGAGGGGTCTGCGCTTTCGATTGCTTCCCGAATAGGAAATTGAGCTCTGATGCCACCGTATATCTCCGCTTCGTCCTCCATATTCTTCCGAAGAAACTTTCTTTTGTTCACCCTAGAGACGATATCAGTTCGAAAGCGAAATCGTCAATGTCTGCCCTTGAGCTTGAGGAGGAAGGGAGAACGGTGAAGAGGACCGGCAATGGAGTCGGC

Coding sequence (CDS)

ATGATAATGCATCGATGGCAAGCCATATTTAAGTTTAAGCACAGAAGTAAACTAATGAGAATGCAGAAAAGCTCCATCTGGGGGAAGCAAGAACTAACAAACAGTTTCAAGGTGCCACTCTCCACAAGTCAGTCCAGATATGTGCCCTTTAGTGTTCTTCAGATCACGGCTTCTCAGAGTCACTACCATAACGCCAAGGCTCATGTTAAAAAAGTGCAAAGTAGAGCAGCTCAAACCTTAGTATGGCCCTTGAGCACGATCTCGTTGCTCTGCGGAATTCGATACCGATTCTCCTCATATTCTTCCTCCCCCGCATCCGAATCCTCCAAATTCGAGCCCGGCGGCGGAGGTGGTGGTCCAATCATTTCACCATCGTCATCCCCATCATCATCTGAACCCTCACCGGGCGGCGGCGGCGGCGGAGGCCCAATGATCACATCATCATCATCATTCAATTTCGACTCAATGGGCGGGCGAGGCGGACCAATCTTCGGACCATCGTCAGCACCACTGTCACGCGTGATCCCACTAGGTCCAGAATCGCTCATAACAGGTGGGTTAGGGGTTTTGGAAGTGCGAAGTGAATTGAGCCAGGCTTTGGAGGAGGAAGAGATAGAAGGGAGGGCATTGTTATTCTGTGAGGAAGAAGATTTTTCTGGAATACTTACTGAATTGTTACGACGAGTGGTGTTATGGATGGCTTCGAGAGGGGTCTGCGCTTTCGATTGCTTCCCGAATAGGAAATTGAGCTCTGATGCCACCGTATATCTCCGCTTCGTCCTCCATATTCTTCCGAAGAAACTTTCTTTTGTTCACCCTAGAGACGATATCAGTTCGAAAGCGAAATCGTCAATGTCTGCCCTTGAGCTTGAGGAGGAAGGGAGAACGGTGAAGAGGACCGGCAATGGAGTCGGC

Protein sequence

MIMHRWQAIFKFKHRSKLMRMQKSSIWGKQELTNSFKVPLSTSQSRYVPFSVLQITASQSHYHNAKAHVKKVQSRAAQTLVWPLSTISLLCGIRYRFSSYSSSPASESSKFEPGGGGGGPIISPSSSPSSSEPSPGGGGGGGPMITSSSSFNFDSMGGRGGPIFGPSSAPLSRVIPLGPESLITGGLGVLEVRSELSQALEEEEIEGRALLFCEEEDFSGILTELLRRVVLWMASRGVCAFDCFPNRKLSSDATVYLRFVLHILPKKLSFVHPRDDISSKAKSSMSALELEEEGRTVKRTGNGVG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G129940.1CcUC07G129940.1mRNA