CcUC07G129390 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G129390
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionLOB domain-containing protein
LocationCicolChr07: 968010 .. 969604 (+)
RNA-Seq ExpressionCcUC07G129390
SyntenyCcUC07G129390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGTGGTGGCGGCGGTGGCGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCCGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCCCTCCAACAACAGGTGTGATCATTAATTTTCTTTAATATTACTTGTTTGCTTTAATCATCACTTATTAGCTCGATCGATTCGTCGTTTCTCAAGTCTACGGATGGACAAAGGTTAAGAACGTTTTAGCCTTCTAAAATCTAAATTAAGGTTTTAAAAAAAAGTTTGAAAACTCATTTTTGTTAAAATCTGCTAAGAATTGAAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGGAGAAAGATTAATTAAATCATTATAGAAAAATTGTAAAGAAACAAATATAATTTATAGAAAAACAGAAAACTAAAACTAAAATGGTTGTTAATTGAAACCTAAAAGATTAGATTTTTTTCACAACCCATATAAAATTTTTTAACTTTTGAATTCAGCGATGATTTTCAACATGTTATTGTTATTTTTTATTTGTTTTCTTTGGAGTGTCCTTAGGGAGAGGGGTAGAACAAAAAAAAACAACTTATCCATGTCGATTTAGAACTTTTTTGAATTGGTGATTATTAAATACTTACAAAGTTAATACAAATAGAAACGGACCCTGAATTACCGATGTTACCATGTTGAGTTTGAATGTAAAAAAAACAAAAATTATCTTTAAAATGGTTAATTTTTTTAATAATTTGTTGGGTTTTGAAGGTGGCATATTTACAAACACAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGACAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCAGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAGAATCACCTCCATGAAAGCCAAAGCAGATCAGCAGAACAATCTCAATTTCTTCAACCATTTCCTAGAAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAATTAGTGAAAAAAAAAAGGATGTAATTTAATTTCATTGTTTTGTGAAAGACAATGGATTTTGATGATATAGCATTTTATAAGAGCC

mRNA sequence

ATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGTGGTGGCGGCGGTGGCGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCCGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCCCTCCAACAACAGGTGGCATATTTACAAACACAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGACAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCAGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAGAATCACCTCCATGAAAGCCAAAGCAGATCAGCAGAACAATCTCAATTTCTTCAACCATTTCCTAGAAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAATTAGTGAAAAAAAAAAGGATGTAATTTAATTTCATTGTTTTGTGAAAGACAATGGATTTTGATGATATAGCATTTTATAAGAGCC

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCCTCTTCCTCTGCAAATACTAGTGTGTCAGGCAGTGGCGGTGGTGGTGGCGGCGGTGGCGGCTCGCCTTGTGGAGCATGCAAGTTTCTAAGGAGAAAATGTGTGGCTGATTGTATTTTTGCTCCTTACTTTTGCTCAGAGCAAGGGGCTGCAAGATTTGCTGCCATTCATAAAGTGTTTGGTGCAAGTAATGTTTCAAAGTTGTTGCTTCATGTTCCCGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCTTATGAAGCTCAAGCAAGGATTCATGATCCTGTTTATGGATGTGTTGCTCATATTTTTGCCCTCCAACAACAGGTGGCATATTTACAAACACAGCTAATGCAAGCCAAGGCTCAACTTGCACAAACCCTGATGGATTCAGGAGGTAATATGGAGATTCAATGGACAGGCAATTTCAATAACAATCTCTTCAATGGAATTCCAAATAATTATCAAACTCAGATTATGAACAACCCAGCAGTTTCCCCTCAGAGTTCTTTAGAATCAGCTGCCAACAATGATGAAGCTTTATTATTCATAAATAATCAGAATCACCTCCATGAAAGCCAAAGCAGATCAGCAGAACAATCTCAATTTCTTCAACCATTTCCTAGAAAAAAATTGCCTTCTTCTCATGCTGATCTTGGGGAACTCCAAGCTTTGGCCCTCAGAATGATGAGAAACTAA

Protein sequence

MASSSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSLESAANNDEALLFINNQNHLHESQSRSAEQSQFLQPFPRKKLPSSHADLGELQALALRMMRN
Homology
BLAST of CcUC07G129390 vs. NCBI nr
Match: XP_038888851.1 (LOB domain-containing protein 16-like [Benincasa hispida])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 212/240 (88.33%), Postives = 218/240 (90.83%), Query Frame = 0

Query: 4   SSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 63
           +SSSSS+ +   G  GGGGG GGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK
Sbjct: 2   ASSSSSSVSCGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHK 61

Query: 64  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 123
           VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM
Sbjct: 62  VFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLM 121

Query: 124 QAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIP----NNYQTQIM-NNPAVSPQSSLES 183
           QAKAQLAQTLMDS GNMEIQWT NFNNNL NGIP    NNYQTQIM NNPAVSPQSSLES
Sbjct: 122 QAKAQLAQTLMDSRGNMEIQWTENFNNNLSNGIPNNFQNNYQTQIMNNNPAVSPQSSLES 181

Query: 184 AANNDEALLFINNQNHLHESQSRSAEQSQFLQPFPRKKLPSSHA-DLGELQALALRMMRN 238
           AANNDEALLFIN  ++ HESQSRS E+SQFLQPFP KKLPSSH  DLGELQALALRMMRN
Sbjct: 182 AANNDEALLFINQIHNFHESQSRSPEESQFLQPFPTKKLPSSHVHDLGELQALALRMMRN 241

BLAST of CcUC07G129390 vs. NCBI nr
Match: XP_008461877.1 (PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domain-containing protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 373.6 bits (958), Expect = 1.2e-99
Identity = 210/239 (87.87%), Postives = 217/239 (90.79%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 62
           +SSSS+S NTSVSG   GG GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH
Sbjct: 2   ASSSSTSTNTSVSGC--GGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 61

Query: 63  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 122
           KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL
Sbjct: 62  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 121

Query: 123 MQAKAQLAQTLMDSGGNMEIQWTGNFNN-NLFNG-IP-NNYQTQIMNNPAVSPQSSLESA 182
           MQAKAQLAQTLMDSG NMEIQWTG+FNN NL NG IP NNYQTQIMNNP  +PQSSLESA
Sbjct: 122 MQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP--TPQSSLESA 181

Query: 183 ANNDEALLFINNQNHLHESQ-SRSAEQSQFLQPFPRKKLPSSHADLGELQALALRMMRN 238
           ANNDEALLFIN     HESQ SRS+++ Q LQPFPRKKL SSHADLGEL ALALRMMRN
Sbjct: 182 ANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of CcUC07G129390 vs. NCBI nr
Match: KAE8650674.1 (hypothetical protein Csa_009642 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 2.8e-99
Identity = 211/242 (87.19%), Postives = 219/242 (90.50%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSGG--GGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 62
           +SSSS+S NTS+SG GG  G GGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA
Sbjct: 55  ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 114

Query: 63  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 122
           IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT
Sbjct: 115 IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 174

Query: 123 QLMQAKAQLAQTLMDSGGNMEIQWTGNF-NNNLFNG-IP-NNYQTQIMNNPAVSPQSSLE 182
           QLM AKAQLA+TLMDSG NMEIQWTG+F NNNL NG IP NNYQTQI NNP  SPQSSLE
Sbjct: 175 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP--SPQSSLE 234

Query: 183 SAANNDEALLFINNQNHLHESQ-SRSAEQSQFLQPFPRKKLP-SSHADLGELQALALRMM 238
           SAANNDEALLFIN     HESQ SRS+++ QFLQPFPRKKLP SSHADLGEL ALALRMM
Sbjct: 235 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 294

BLAST of CcUC07G129390 vs. NCBI nr
Match: XP_004152037.2 (LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 372.5 bits (955), Expect = 2.8e-99
Identity = 211/242 (87.19%), Postives = 219/242 (90.50%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSGG--GGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 62
           +SSSS+S NTS+SG GG  G GGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA
Sbjct: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 61

Query: 63  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 122
           IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT
Sbjct: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121

Query: 123 QLMQAKAQLAQTLMDSGGNMEIQWTGNF-NNNLFNG-IP-NNYQTQIMNNPAVSPQSSLE 182
           QLM AKAQLA+TLMDSG NMEIQWTG+F NNNL NG IP NNYQTQI NNP  SPQSSLE
Sbjct: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP--SPQSSLE 181

Query: 183 SAANNDEALLFINNQNHLHESQ-SRSAEQSQFLQPFPRKKLP-SSHADLGELQALALRMM 238
           SAANNDEALLFIN     HESQ SRS+++ QFLQPFPRKKLP SSHADLGEL ALALRMM
Sbjct: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 241

BLAST of CcUC07G129390 vs. NCBI nr
Match: XP_022967414.1 (LOB domain-containing protein 16-like [Cucurbita maxima])

HSP 1 Score: 345.5 bits (885), Expect = 3.6e-91
Identity = 192/239 (80.33%), Postives = 207/239 (86.61%), Query Frame = 0

Query: 2   ASSSSSSSANTSVS---GSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARF 61
           +SSSSSS+AN+SVS   G GGGGGGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARF
Sbjct: 3   SSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARF 62

Query: 62  AAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYL 121
           AA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYL
Sbjct: 63  AAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYL 122

Query: 122 QTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSLES 181
           Q QLMQAKAQLAQTLMDSGGNME+QWTG+FNNNL NGIP+NY+TQIM NPAVSPQSS+ES
Sbjct: 123 QAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIM-NPAVSPQSSVES 182

Query: 182 AANNDEALLFINNQNHLHESQSRSAEQSQFLQPFPRKKLPSSHADLGELQALALRMMRN 238
           AANND AL+F+   NH  ESQ+             R++  S H DLGELQALALRMMRN
Sbjct: 183 AANNDAALMFM---NHYQESQT-----------LARRRSASCHGDLGELQALALRMMRN 226

BLAST of CcUC07G129390 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.7e-55
Identity = 137/246 (55.69%), Postives = 161/246 (65.45%), Query Frame = 0

Query: 14  VSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKL 73
           ++ SG G   G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKL
Sbjct: 1   MASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKL 60

Query: 74  LLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTL 133
           LL+VP+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A   
Sbjct: 61  LLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQ 120

Query: 134 MDSGG---------NMEIQW-------TGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSL- 193
             + G         N  + W        G+  +  +N     Y     NNP VSPQSSL 
Sbjct: 121 TSAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNP-VSPQSSLE 180

Query: 194 ESAANNDEALLFINNQNHLHESQSRSA---EQSQFLQPFPRKKLPSSH--ADLGELQALA 238
           ES +N    +    N    H          +   F + +P KK   S+  +DLGELQALA
Sbjct: 181 ESFSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALA 240

BLAST of CcUC07G129390 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 176.0 bits (445), Expect = 5.0e-43
Identity = 89/116 (76.72%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 15  SGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLL 74
           SG GG  GGGGG PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLL
Sbjct: 24  SGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLL 83

Query: 75  LHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 131
           LH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 84  LHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of CcUC07G129390 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 6.1e-41
Identity = 84/108 (77.78%), Postives = 90/108 (83.33%), Query Frame = 0

Query: 24  GGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 83
           G GSPCGACKFLRRKCV  C+FAPYFC EQGAA FAAIHKVFGASNVSKLL H+P+ DR 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 84  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQ 132
           EA VTI+YEAQAR+ DP+YGCVAHIFALQQQV  LQ QL   KA  AQ
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

BLAST of CcUC07G129390 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.1e-39
Identity = 85/134 (63.43%), Postives = 98/134 (73.13%), Query Frame = 0

Query: 1   MASSSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 60
           M SSSSSS                 GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAA
Sbjct: 1   MTSSSSSS-----------------GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAA 60

Query: 61  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 120
           IHKVFGASN SKLL H+P+ DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ 
Sbjct: 61  IHKVFGASNASKLLSHLPISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQA 117

Query: 121 QLMQAKAQLAQTLM 135
           +L   K Q AQ+++
Sbjct: 121 ELEILKQQAAQSMI 117

BLAST of CcUC07G129390 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.4e-39
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0

Query: 13  SVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSK 72
           S SG+     GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 73  LLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 131
           LL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L   +A LA
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

BLAST of CcUC07G129390 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.0e-100
Identity = 210/239 (87.87%), Postives = 217/239 (90.79%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 62
           +SSSS+S NTSVSG   GG GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH
Sbjct: 2   ASSSSTSTNTSVSGC--GGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 61

Query: 63  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 122
           KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL
Sbjct: 62  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 121

Query: 123 MQAKAQLAQTLMDSGGNMEIQWTGNFNN-NLFNG-IP-NNYQTQIMNNPAVSPQSSLESA 182
           MQAKAQLAQTLMDSG NMEIQWTG+FNN NL NG IP NNYQTQIMNNP  +PQSSLESA
Sbjct: 122 MQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP--TPQSSLESA 181

Query: 183 ANNDEALLFINNQNHLHESQ-SRSAEQSQFLQPFPRKKLPSSHADLGELQALALRMMRN 238
           ANNDEALLFIN     HESQ SRS+++ Q LQPFPRKKL SSHADLGEL ALALRMMRN
Sbjct: 182 ANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of CcUC07G129390 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.0e-100
Identity = 210/239 (87.87%), Postives = 217/239 (90.79%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 62
           +SSSS+S NTSVSG   GG GGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH
Sbjct: 2   ASSSSTSTNTSVSGC--GGSGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIH 61

Query: 63  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 122
           KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL
Sbjct: 62  KVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQL 121

Query: 123 MQAKAQLAQTLMDSGGNMEIQWTGNFNN-NLFNG-IP-NNYQTQIMNNPAVSPQSSLESA 182
           MQAKAQLAQTLMDSG NMEIQWTG+FNN NL NG IP NNYQTQIMNNP  +PQSSLESA
Sbjct: 122 MQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNP--TPQSSLESA 181

Query: 183 ANNDEALLFINNQNHLHESQ-SRSAEQSQFLQPFPRKKLPSSHADLGELQALALRMMRN 238
           ANNDEALLFIN     HESQ SRS+++ Q LQPFPRKKL SSHADLGEL ALALRMMRN
Sbjct: 182 ANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKLSSSHADLGELHALALRMMRN 236

BLAST of CcUC07G129390 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99
Identity = 211/242 (87.19%), Postives = 219/242 (90.50%), Query Frame = 0

Query: 3   SSSSSSSANTSVSGSGG--GGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 62
           +SSSS+S NTS+SG GG  G GGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA
Sbjct: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 61

Query: 63  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 122
           IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT
Sbjct: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121

Query: 123 QLMQAKAQLAQTLMDSGGNMEIQWTGNF-NNNLFNG-IP-NNYQTQIMNNPAVSPQSSLE 182
           QLM AKAQLA+TLMDSG NMEIQWTG+F NNNL NG IP NNYQTQI NNP  SPQSSLE
Sbjct: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP--SPQSSLE 181

Query: 183 SAANNDEALLFINNQNHLHESQ-SRSAEQSQFLQPFPRKKLP-SSHADLGELQALALRMM 238
           SAANNDEALLFIN     HESQ SRS+++ QFLQPFPRKKLP SSHADLGEL ALALRMM
Sbjct: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 241

BLAST of CcUC07G129390 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.7e-91
Identity = 192/239 (80.33%), Postives = 207/239 (86.61%), Query Frame = 0

Query: 2   ASSSSSSSANTSVS---GSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARF 61
           +SSSSSS+AN+SVS   G GGGGGGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARF
Sbjct: 3   SSSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARF 62

Query: 62  AAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYL 121
           AA+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYL
Sbjct: 63  AAVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYL 122

Query: 122 QTQLMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSLES 181
           Q QLMQAKAQLAQTLMDSGGNME+QWTG+FNNNL NGIP+NY+TQIM NPAVSPQSS+ES
Sbjct: 123 QAQLMQAKAQLAQTLMDSGGNMELQWTGSFNNNLSNGIPSNYETQIM-NPAVSPQSSVES 182

Query: 182 AANNDEALLFINNQNHLHESQSRSAEQSQFLQPFPRKKLPSSHADLGELQALALRMMRN 238
           AANND AL+F+   NH  ESQ+             R++  S H DLGELQALALRMMRN
Sbjct: 183 AANNDAALMFM---NHYQESQT-----------LARRRSASCHGDLGELQALALRMMRN 226

BLAST of CcUC07G129390 vs. ExPASy TrEMBL
Match: A0A6J1HIG3 (LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463903 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.2e-89
Identity = 188/236 (79.66%), Postives = 204/236 (86.44%), Query Frame = 0

Query: 2   ASSSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAI 61
           +SSSSSS+AN+SVSG GGGGGGGGGSPCGACKFLRRKCVA+CIFAPYF SEQGAARFAA+
Sbjct: 3   SSSSSSSTANSSVSG-GGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAAV 62

Query: 62  HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQ 121
           HKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ Q
Sbjct: 63  HKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVACLQAQ 122

Query: 122 LMQAKAQLAQTLMDSGGNMEIQWTGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSLESAAN 181
           LMQAKAQLAQTLM+SGGNME+QWTG+FNNNL NGIP+NY+TQIM NPAVSPQSS+ESAAN
Sbjct: 123 LMQAKAQLAQTLMESGGNMELQWTGSFNNNLSNGIPSNYETQIM-NPAVSPQSSVESAAN 182

Query: 182 NDEALLFINNQNHLHESQSRSAEQSQFLQPFPRKKLPSSHADLGELQALALRMMRN 238
           ND AL+F+   NH  ESQ+             R++  S H DLGELQALALRMMRN
Sbjct: 183 NDAALMFM---NHYQESQT-----------LGRRRSASCHGDLGELQALALRMMRN 222

BLAST of CcUC07G129390 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 215.7 bits (548), Expect = 4.0e-56
Identity = 137/246 (55.69%), Postives = 161/246 (65.45%), Query Frame = 0

Query: 14  VSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKL 73
           ++ SG G   G GSPCGACKFLRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKL
Sbjct: 1   MASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKL 60

Query: 74  LLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTL 133
           LL+VP+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+MQ KAQ+A   
Sbjct: 61  LLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQ 120

Query: 134 MDSGG---------NMEIQW-------TGNFNNNLFNGIPNNYQTQIMNNPAVSPQSSL- 193
             + G         N  + W        G+  +  +N     Y     NNP VSPQSSL 
Sbjct: 121 TSAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNP-VSPQSSLE 180

Query: 194 ESAANNDEALLFINNQNHLHESQSRSA---EQSQFLQPFPRKKLPSSH--ADLGELQALA 238
           ES +N    +    N    H          +   F + +P KK   S+  +DLGELQALA
Sbjct: 181 ESFSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALA 240

BLAST of CcUC07G129390 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-44
Identity = 89/116 (76.72%), Postives = 97/116 (83.62%), Query Frame = 0

Query: 15  SGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLL 74
           SG GG  GGGGG PCGACKFLRRKCV  CIFAPYF SEQG+A FAA+HKVFGASNVSKLL
Sbjct: 24  SGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLL 83

Query: 75  LHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 131
           LH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQQQV  LQ ++   +A LA
Sbjct: 84  LHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

BLAST of CcUC07G129390 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 164.9 bits (416), Expect = 8.1e-41
Identity = 85/134 (63.43%), Postives = 98/134 (73.13%), Query Frame = 0

Query: 1   MASSSSSSSANTSVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAA 60
           M SSSSSS                 GSPCGACKFLRRKC   C+FAPYFC EQGA+ FAA
Sbjct: 1   MTSSSSSS-----------------GSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAA 60

Query: 61  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 120
           IHKVFGASN SKLL H+P+ DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ 
Sbjct: 61  IHKVFGASNASKLLSHLPISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQA 117

Query: 121 QLMQAKAQLAQTLM 135
           +L   K Q AQ+++
Sbjct: 121 ELEILKQQAAQSMI 117

BLAST of CcUC07G129390 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 162.2 bits (409), Expect = 5.3e-40
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0

Query: 13  SVSGSGGGGGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSK 72
           S SG+     GGGG PCGACKFLRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVSK
Sbjct: 2   SSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVSK 61

Query: 73  LLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLA 131
           LL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L   +A LA
Sbjct: 62  LLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

BLAST of CcUC07G129390 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-39
Identity = 78/111 (70.27%), Postives = 89/111 (80.18%), Query Frame = 0

Query: 24  GGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 83
           G GSPCGACKFLRR+CV  C+FAPYFC EQGA+ FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 84  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMQAKAQLAQTLM 135
           EA  TI YEAQAR  DP+YGCV+HIF+LQQQV  LQTQL   K Q  Q++M
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038888851.11.4e-10388.33LOB domain-containing protein 16-like [Benincasa hispida][more]
XP_008461877.11.2e-9987.87PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domai... [more]
KAE8650674.12.8e-9987.19hypothetical protein Csa_009642 [Cucumis sativus][more]
XP_004152037.22.8e-9987.19LOB domain-containing protein 16 [Cucumis sativus][more]
XP_022967414.13.6e-9180.33LOB domain-containing protein 16-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Q9SLB75.7e-5555.69LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S... [more]
O221315.0e-4376.72LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S... [more]
Q5UG136.1e-4177.78LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C... [more]
Q9M2J71.1e-3963.43LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S... [more]
O813237.4e-3971.19LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A5D3C5366.0e-10087.87LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CG766.0e-10087.87LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV... [more]
A0A0A0LAE81.3e-9987.19LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV... [more]
A0A6J1HWM71.7e-9180.33LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC11146695... [more]
A0A6J1HIG36.2e-8979.66LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463... [more]
Match NameE-valueIdentityDescription
AT2G42430.14.0e-5655.69lateral organ boundaries-domain 16 [more]
AT2G45420.13.5e-4476.72LOB domain-containing protein 18 [more]
AT3G58190.18.1e-4163.43lateral organ boundaries-domain 29 [more]
AT4G00220.15.3e-4071.19Lateral organ boundaries (LOB) domain family protein [more]
AT2G42440.11.2e-3970.27Lateral organ boundaries (LOB) domain family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 28..126
e-value: 2.7E-36
score: 124.1
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 27..129
score: 22.677494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..220
NoneNo IPR availablePANTHERPTHR31529:SF23LOB DOMAIN-CONTAINING PROTEIN 16coord: 15..236
NoneNo IPR availablePANTHERPTHR31529LOB DOMAIN CONTAINING PROTEINcoord: 15..236

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G129390.1CcUC07G129390.1mRNA