CcUC07G128630 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G128630
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	zinc transporter 5
Location	CicolChr07: 254773 .. 255231 (-)
RNA-Seq Expression	CcUC07G128630
Synteny	CcUC07G128630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAGGTTCAAAACTGCATTCCTATTAGCAGCGCTATTGTGTGTGGTAGCTGTGATCCCCAGAATGGAGGCGCAAGGATGGGGTCACCCACCGCCGCTGTTGCCTCCACGCCCACTTTGTTCTTCGCAATTTGCATTGGCAAGCTACGCATGTGCGAGGCTGCCTGTGAACCCGGACCCCATCCCAATTCCTCCGCCTCCTTCGCCTGATGTGGAAGAAGGGAACGGACATGGGCACGGCCACGGGCATCGGCATCACCACGGGCGCCACCACCACAGCCAGTCACCGGTGGCGGAGGAATGCTGCCGATGGGCCAGGCAGGTGGATAGCGAGTGCGTGTGCGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCCTCGCATGCGTTTACGGTGGCCATCACTGACGAATGCATTGTCACTTACTCATGCAACGGACGAATCACGATTTGA

mRNA sequence

ATGGGGAGGTTCAAAACTGCATTCCTATTAGCAGCGCTATTGTGTGTGGTAGCTGTGATCCCCAGAATGGAGGCGCAAGGATGGGGTCACCCACCGCCGCTGTTGCCTCCACGCCCACTTTGTTCTTCGCAATTTGCATTGGCAAGCTACGCATGTGCGAGGCTGCCTGTGAACCCGGACCCCATCCCAATTCCTCCGCCTCCTTCGCCTGATGTGGAAGAAGGGAACGGACATGGGCACGGCCACGGGCATCGGCATCACCACGGGCGCCACCACCACAGCCAGTCACCGGTGGCGGAGGAATGCTGCCGATGGGCCAGGCAGGTGGATAGCGAGTGCGTGTGCGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCCTCGCATGCGTTTACGGTGGCCATCACTGACGAATGCATTGTCACTTACTCATGCAACGGACGAATCACGATTTGA

Coding sequence (CDS)

ATGGGGAGGTTCAAAACTGCATTCCTATTAGCAGCGCTATTGTGTGTGGTAGCTGTGATCCCCAGAATGGAGGCGCAAGGATGGGGTCACCCACCGCCGCTGTTGCCTCCACGCCCACTTTGTTCTTCGCAATTTGCATTGGCAAGCTACGCATGTGCGAGGCTGCCTGTGAACCCGGACCCCATCCCAATTCCTCCGCCTCCTTCGCCTGATGTGGAAGAAGGGAACGGACATGGGCACGGCCACGGGCATCGGCATCACCACGGGCGCCACCACCACAGCCAGTCACCGGTGGCGGAGGAATGCTGCCGATGGGCCAGGCAGGTGGATAGCGAGTGCGTGTGCGAGGCGTTAGTTCATTTGGCTAACTTCTTGGTGCGACCCTCGCATGCGTTTACGGTGGCCATCACTGACGAATGCATTGTCACTTACTCATGCAACGGACGAATCACGATTTGA

Protein sequence

MGRFKTAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEGNGHGHGHGHRHHHGRHHHSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI

Homology

[Close]

BLAST of CcUC07G128630 vs. NCBI nr
Match: XP_022155619.1 (uncharacterized protein LOC111022709 [Momordica charantia])

HSP 1 Score: 251.5 bits (641), Expect = 4.6e-63
Identity = 122/160 (76.25%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 1   MGRFKTAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPD 60
           MGRFK A LLAA LCV+ +IP+ME Q W  P PLLPPRPLCSSQFALASYACARLP+NP+
Sbjct: 1   MGRFKIAHLLAA-LCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPE 60

Query: 61  PIPIPPPPSPDVEEGNGHGHGHG--------HRHHHGRHHHSQSPVAEECCRWARQVDSE 120
           PIPI PPPSP  E+G+GHGHGHG        H+HHH R HH+ SPVAEECCRWAR+VDSE
Sbjct: 61  PIPILPPPSPVDEDGHGHGHGHGHGHGHGHQHQHHHRRRHHTHSPVAEECCRWAREVDSE 120

Query: 121 CVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI 153
           CVC+AL+HLANFL+RPSHAFTVAITD+CIVTYSCNGRI I
Sbjct: 121 CVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIKI 159

[Close]

BLAST of CcUC07G128630 vs. NCBI nr
Match: XP_022967638.1 (uncharacterized protein LOC111467082 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 4.7e-52
Identity = 106/157 (67.52%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 1   MGRFKTAFLLAALLCVVAVI-PRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNP 60
           MGR + A+  AALL V+A++ P++EAQ W +     PP+PLCSSQFALASYACARLP+N 
Sbjct: 1   MGRLEFAYASAALLFVLALMTPKIEAQAWSY-----PPKPLCSSQFALASYACARLPLNL 60

Query: 61  DPIPIPPPPSPDVEEGNGHGHGHGH----RHHHGRHHHSQSPVAEECCRWARQVDSECVC 120
           +P+PI PPPSP VEEG+ HGH HGH     HHHG HH ++SP+ EECCRWARQVD+ECVC
Sbjct: 61  EPLPISPPPSPHVEEGHRHGHEHGHGHHRGHHHGHHHRNRSPIEEECCRWARQVDNECVC 120

Query: 121 EALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI 153
           +AL HLANF+VRPSH FTVAIT++CIVTYSC GRI I
Sbjct: 121 DALAHLANFMVRPSHVFTVAITEDCIVTYSCIGRIKI 152

[Close]

BLAST of CcUC07G128630 vs. NCBI nr
Match: KAG6571480.1 (hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011243.1 hypothetical protein SDJN02_26146, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-50
Identity = 105/160 (65.62%), Postives = 125/160 (78.12%), Query Frame = 0


Query: 1   MGRFKTAFLLAALLCVVA-VIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNP 60
           MGR + A+ LAALL V+A +IP ++AQ W +     PP+PLCSSQFALASYACARLP+NP
Sbjct: 1   MGRLEFAYTLAALLFVLALMIPEIDAQAWSY-----PPKPLCSSQFALASYACARLPLNP 60

Query: 61  DPIPIPPPPSP-----DVEEGNGHGHGHGHR--HHHGRHHHSQSPVAEECCRWARQVDSE 120
           +P+PI PP SP     D +  + H HGHGH   HHHG HH S+SP+ EECCRWARQVDSE
Sbjct: 61  EPLPISPPSSPHGHGHDHDHNHDHDHGHGHHRGHHHGHHHRSRSPIEEECCRWARQVDSE 120

Query: 121 CVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI 153
           CVC+AL HLANF+VRPSH FTVAIT++C+VTYSC GRI I
Sbjct: 121 CVCDALAHLANFMVRPSHVFTVAITEDCVVTYSCIGRIKI 155

[Close]

BLAST of CcUC07G128630 vs. NCBI nr
Match: XP_015891580.1 (uncharacterized protein DDB_G0272724 [Ziziphus jujuba])

HSP 1 Score: 151.4 bits (381), Expect = 6.4e-33
Identity = 74/139 (53.24%), Postives = 96/139 (69.06%), Query Frame = 0


Query: 16  VVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEG 75
           ++ ++P++E+Q      P + PRPLC+SQFALASYAC+ +P  P P   P PPSP    G
Sbjct: 6   LLLLVPKLESQ----VLPPVAPRPLCASQFALASYACSLIPFTPLPPEPPSPPSPPDFLG 65

Query: 76  NGHGHGHGHRHHHG-----RHHHSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSH 135
           + HGHGHGHRH HG     RH H +SP  E CCRW +Q+DS+CVC+ LVHL NFL RP+H
Sbjct: 66  HSHGHGHGHRHGHGHRHGHRHRHRESPAEESCCRWLKQLDSQCVCDVLVHLPNFLSRPAH 125

Query: 136 AFTVAITDECIVTYSCNGR 150
            ++V + D C VT+SC GR
Sbjct: 126 EYSVIVGDACDVTFSCEGR 140

[Close]

BLAST of CcUC07G128630 vs. NCBI nr
Match: GAY40724.1 (hypothetical protein CUMW_054210 [Citrus unshiu])

HSP 1 Score: 148.7 bits (374), Expect = 4.2e-32
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 10  LAALLCVVAVIPRMEAQGWGHP---PPLLPPRPLCSSQFALASYACARLPVNP-DPIPIP 69
           +A  + V+AV+P+ME Q    P   PP  PPRPLC+SQFAL +YAC+ LP NP  P+P P
Sbjct: 9   VALFVSVLAVLPQMECQLRPRPMPLPPPAPPRPLCASQFALVNYACSMLPYNPAAPVPPP 68

Query: 70  PPPSP------DVEEGNGHGHGHGHRHHHGRHHHSQSPVAEECCRWARQVDSECVCEALV 129
            PPSP      D E    HGH HGHRH HG   H ++P  E CCRW +QVD ECVC+ LV
Sbjct: 69  SPPSPNSPPPDDDESLQRHGHRHGHRHRHG-GVHEETPEGESCCRWLKQVDDECVCDLLV 128

Query: 130 HLANFLVRPSHAFTVAITDECIVTYSCNGRI 151
            L  FL RP H +TV + + C VTY+C+GR+
Sbjct: 129 RLPVFLARPVHTYTVIVDESCNVTYACSGRL 158

[Close]

BLAST of CcUC07G128630 vs. ExPASy TrEMBL
Match: A0A6J1DQT3 (uncharacterized protein LOC111022709 OS=Momordica charantia OX=3673 GN=LOC111022709 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.2e-63
Identity = 122/160 (76.25%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 1   MGRFKTAFLLAALLCVVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPD 60
           MGRFK A LLAA LCV+ +IP+ME Q W  P PLLPPRPLCSSQFALASYACARLP+NP+
Sbjct: 1   MGRFKIAHLLAA-LCVLVLIPQMEGQAWSQPSPLLPPRPLCSSQFALASYACARLPLNPE 60

Query: 61  PIPIPPPPSPDVEEGNGHGHGHG--------HRHHHGRHHHSQSPVAEECCRWARQVDSE 120
           PIPI PPPSP  E+G+GHGHGHG        H+HHH R HH+ SPVAEECCRWAR+VDSE
Sbjct: 61  PIPILPPPSPVDEDGHGHGHGHGHGHGHGHQHQHHHRRRHHTHSPVAEECCRWAREVDSE 120

Query: 121 CVCEALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI 153
           CVC+AL+HLANFL+RPSHAFTVAITD+CIVTYSCNGRI I
Sbjct: 121 CVCDALIHLANFLIRPSHAFTVAITDDCIVTYSCNGRIKI 159

[Close]

BLAST of CcUC07G128630 vs. ExPASy TrEMBL
Match: A0A6J1HVN1 (uncharacterized protein LOC111467082 OS=Cucurbita maxima OX=3661 GN=LOC111467082 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 106/157 (67.52%), Postives = 127/157 (80.89%), Query Frame = 0


Query: 1   MGRFKTAFLLAALLCVVAVI-PRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNP 60
           MGR + A+  AALL V+A++ P++EAQ W +     PP+PLCSSQFALASYACARLP+N 
Sbjct: 1   MGRLEFAYASAALLFVLALMTPKIEAQAWSY-----PPKPLCSSQFALASYACARLPLNL 60

Query: 61  DPIPIPPPPSPDVEEGNGHGHGHGH----RHHHGRHHHSQSPVAEECCRWARQVDSECVC 120
           +P+PI PPPSP VEEG+ HGH HGH     HHHG HH ++SP+ EECCRWARQVD+ECVC
Sbjct: 61  EPLPISPPPSPHVEEGHRHGHEHGHGHHRGHHHGHHHRNRSPIEEECCRWARQVDNECVC 120

Query: 121 EALVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI 153
           +AL HLANF+VRPSH FTVAIT++CIVTYSC GRI I
Sbjct: 121 DALAHLANFMVRPSHVFTVAITEDCIVTYSCIGRIKI 152

[Close]

BLAST of CcUC07G128630 vs. ExPASy TrEMBL
Match: A0A6P4AZX7 (uncharacterized protein DDB_G0272724 OS=Ziziphus jujuba OX=326968 GN=LOC107426015 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.1e-33
Identity = 74/139 (53.24%), Postives = 96/139 (69.06%), Query Frame = 0


Query: 16  VVAVIPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSPDVEEG 75
           ++ ++P++E+Q      P + PRPLC+SQFALASYAC+ +P  P P   P PPSP    G
Sbjct: 6   LLLLVPKLESQ----VLPPVAPRPLCASQFALASYACSLIPFTPLPPEPPSPPSPPDFLG 65

Query: 76  NGHGHGHGHRHHHG-----RHHHSQSPVAEECCRWARQVDSECVCEALVHLANFLVRPSH 135
           + HGHGHGHRH HG     RH H +SP  E CCRW +Q+DS+CVC+ LVHL NFL RP+H
Sbjct: 66  HSHGHGHGHRHGHGHRHGHRHRHRESPAEESCCRWLKQLDSQCVCDVLVHLPNFLSRPAH 125

Query: 136 AFTVAITDECIVTYSCNGR 150
            ++V + D C VT+SC GR
Sbjct: 126 EYSVIVGDACDVTFSCEGR 140

[Close]

BLAST of CcUC07G128630 vs. ExPASy TrEMBL
Match: M5W0Q1 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021373mg PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 20  IPRMEAQGWGHPPPLLPPRPLCSSQFALASYACARLPVNPDPIPIPPPPSP--------- 79
           +P+MEAQ         PPRPLC+SQFALA+YACA LP  P P+P PP P P         
Sbjct: 5   VPKMEAQRL-----FPPPRPLCASQFALANYACALLPFTPTPLPTPPSPPPSSPPDDDGG 64

Query: 80  -------DVEEGNGHGHGHGHRHHHGRHHH------SQSPVAEECCRWARQVDSECVCEA 139
                  +   G+GHGHGHGHRH H RH H      S SP  + CCRW  Q+D+ECVCE 
Sbjct: 65  QEQEHEHEHGHGHGHGHGHGHRHGHNRHRHGGHHEPSPSPAEDNCCRWLTQLDNECVCEL 124

Query: 140 LVHLANFLVRPSHAFTVAITDECIVTYSCNGRITI 153
           LVHL  FL++P+HA+TVA+ + C VTY+C   I I
Sbjct: 125 LVHLPTFLLKPTHAYTVAVGEFCRVTYTCGTPIRI 154

[Close]

BLAST of CcUC07G128630 vs. ExPASy TrEMBL
Match: A0A2H5NKN0 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_054210 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.0e-32
Identity = 79/151 (52.32%), Postives = 98/151 (64.90%), Query Frame = 0


Query: 10  LAALLCVVAVIPRMEAQGWGHP---PPLLPPRPLCSSQFALASYACARLPVNP-DPIPIP 69
           +A  + V+AV+P+ME Q    P   PP  PPRPLC+SQFAL +YAC+ LP NP  P+P P
Sbjct: 9   VALFVSVLAVLPQMECQLRPRPMPLPPPAPPRPLCASQFALVNYACSMLPYNPAAPVPPP 68

Query: 70  PPPSP------DVEEGNGHGHGHGHRHHHGRHHHSQSPVAEECCRWARQVDSECVCEALV 129
            PPSP      D E    HGH HGHRH HG   H ++P  E CCRW +QVD ECVC+ LV
Sbjct: 69  SPPSPNSPPPDDDESLQRHGHRHGHRHRHG-GVHEETPEGESCCRWLKQVDDECVCDLLV 128

Query: 130 HLANFLVRPSHAFTVAITDECIVTYSCNGRI 151
            L  FL RP H +TV + + C VTY+C+GR+
Sbjct: 129 RLPVFLARPVHTYTVIVDESCNVTYACSGRL 158

[Close]

BLAST of CcUC07G128630 vs. TAIR 10
Match: AT3G63095.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 87.4 bits (215), Expect = 1.1e-17
Identity = 63/222 (28.38%), Postives = 85/222 (38.29%), Query Frame = 0


Query: 36  PPRPLCSSQFALASYACARLPVN--PDPIPIPPPPSP----------------------- 95
           PPRPLC+SQ+ALA+YAC+RLP++  P P PI PPP+P                       
Sbjct: 28  PPRPLCASQYALANYACSRLPMHTVPPPAPITPPPAPIAPPPPEHDHHDHDHDHDHDHDH 87

Query: 96  ------------------------------------------------------------ 151
                                                                       
Sbjct: 88  DDDHDDDDDHDHDDDHDHDHDDDHDHDDDDRDRDRDRDRDRDRDRDHDRAHDDHDHNHDH 147

The following BLAST results are available for this feature:

BLAST of CcUC07G128630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155619.1	4.6e-63	76.25	uncharacterized protein LOC111022709 [Momordica charantia]	[more]
XP_022967638.1	4.7e-52	67.52	uncharacterized protein LOC111467082 [Cucurbita maxima]	[more]
KAG6571480.1	1.5e-50	65.63	hypothetical protein SDJN03_28208, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_015891580.1	6.4e-33	53.24	uncharacterized protein DDB_G0272724 [Ziziphus jujuba]	[more]
GAY40724.1	4.2e-32	52.32	hypothetical protein CUMW_054210 [Citrus unshiu]	[more]

BLAST of CcUC07G128630 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G128630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DQT3	2.2e-63	76.25	uncharacterized protein LOC111022709 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1HVN1	2.3e-52	67.52	uncharacterized protein LOC111467082 OS=Cucurbita maxima OX=3661 GN=LOC111467082...	[more]
A0A6P4AZX7	3.1e-33	53.24	uncharacterized protein DDB_G0272724 OS=Ziziphus jujuba OX=326968 GN=LOC10742601...	[more]
M5W0Q1	2.0e-32	50.32	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa021373m...	[more]
A0A2H5NKN0	2.0e-32	52.32	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_054210 PE=4 SV=1	[more]

BLAST of CcUC07G128630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63095.1	1.1e-17	28.38	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 41..146 e-value: 0.0096 score: 25.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..93
None	No IPR available	PANTHER	PTHR34377:SF6	SUBFAMILY NOT NAMED	coord: 3..150
None	No IPR available	PANTHER	PTHR34377	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN	coord: 3..150
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 92..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G128630.1	CcUC07G128630.1	mRNA