CcUC06G127670 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGTCAACAACGCTCAAAGAAGACCACACATTCTTCTTGTTGCTTGTGGAAGTGTTGCTGCAGTAAAGTTTAGAACCCTCTGCCACGGTTTTTCTGAATGGGCCGAAGTTCGAGCAGTTGCCACAAACGCAGCGTTGTTCTTCATTGACCAAGCATCCCTCCCAAAGAATGTCTTTCTTTACATCGACGATGATGATTGGTCCAATTGGAGGAAAATTGGCGACAATGTCCTTCACATTCAGCTTTGCAACTGGGCTGATATTATGGTTATTGCACCACTCTCAGCAAACACACTTGGAAAGGTTATATTATACGTTTGA ATGCAAGTCAACAACGCTCAAAGAAGACCACACATTCTTCTTGTTGCTTGTGGAAGTGTTGCTGCAGTAAAGTTTAGAACCCTCTGCCACGGTTTTTCTGAATGGGCCGAAGTTCGAGCAGTTGCCACAAACGCAGCGTTGTTCTTCATTGACCAAGCATCCCTCCCAAAGAATGTCTTTCTTTACATCGACGATGATGATTGGTCCAATTGGAGGAAAATTGGCGACAATGTCCTTCACATTCAGCTTTGCAACTGGGCTGATATTATGGTTATTGCACCACTCTCAGCAAACACACTTGGAAAGGTTATATTATACGTTTGA ATGCAAGTCAACAACGCTCAAAGAAGACCACACATTCTTCTTGTTGCTTGTGGAAGTGTTGCTGCAGTAAAGTTTAGAACCCTCTGCCACGGTTTTTCTGAATGGGCCGAAGTTCGAGCAGTTGCCACAAACGCAGCGTTGTTCTTCATTGACCAAGCATCCCTCCCAAAGAATGTCTTTCTTTACATCGACGATGATGATTGGTCCAATTGGAGGAAAATTGGCGACAATGTCCTTCACATTCAGCTTTGCAACTGGGCTGATATTATGGTTATTGCACCACTCTCAGCAAACACACTTGGAAAGGTTATATTATACGTTTGA MQVNNAQRRPHILLVACGSVAAVKFRTLCHGFSEWAEVRAVATNAALFFIDQASLPKNVFLYIDDDDWSNWRKIGDNVLHIQLCNWADIMVIAPLSANTLGKVILYV Homology
BLAST of CcUC06G127670 vs. NCBI nr
Match: XP_038880127.1 (probable phosphopantothenoylcysteine decarboxylase [Benincasa hispida]) HSP 1 Score: 197.6 bits (501), Expect = 5.5e-47 Identity = 90/103 (87.38%), Postives = 97/103 (94.17%), Query Frame = 0
BLAST of CcUC06G127670 vs. NCBI nr
Match: XP_011652837.1 (probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus] >XP_031738069.1 probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus] >XP_031738073.1 probable phosphopantothenoylcysteine decarboxylase [Cucumis sativus] >KGN63503.1 hypothetical protein Csa_013175 [Cucumis sativus]) HSP 1 Score: 185.3 bits (469), Expect = 2.8e-43 Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = 0
BLAST of CcUC06G127670 vs. NCBI nr
Match: XP_022965642.1 (phosphopantothenoylcysteine decarboxylase-like [Cucurbita maxima]) HSP 1 Score: 184.9 bits (468), Expect = 3.7e-43 Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of CcUC06G127670 vs. NCBI nr
Match: XP_023531682.1 (phosphopantothenoylcysteine decarboxylase-like [Cucurbita pepo subsp. pepo] >KAG6587425.1 Phosphopantothenoylcysteine decarboxylase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021409.1 Phosphopantothenoylcysteine decarboxylase [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 184.9 bits (468), Expect = 3.7e-43 Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of CcUC06G127670 vs. NCBI nr
Match: XP_008464452.1 (PREDICTED: probable phosphopantothenoylcysteine decarboxylase [Cucumis melo] >KAA0057780.1 putative phosphopantothenoylcysteine decarboxylase [Cucumis melo var. makuwa] >TYJ98461.1 putative phosphopantothenoylcysteine decarboxylase [Cucumis melo var. makuwa]) HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42 Identity = 86/103 (83.50%), Postives = 92/103 (89.32%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy Swiss-Prot
Match: Q9SWE5 (Phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3A PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 5.0e-35 Identity = 66/103 (64.08%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy Swiss-Prot
Match: Q69K55 (Phosphopantothenoylcysteine decarboxylase OS=Oryza sativa subsp. japonica OX=39947 GN=HAL3 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 5.0e-35 Identity = 67/95 (70.53%), Postives = 78/95 (82.11%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy Swiss-Prot
Match: P94063 (Probable phosphopantothenoylcysteine decarboxylase OS=Arabidopsis thaliana OX=3702 GN=HAL3B PE=2 SV=2) HSP 1 Score: 146.4 bits (368), Expect = 1.9e-34 Identity = 65/103 (63.11%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy Swiss-Prot
Match: Q96CD2 (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens OX=9606 GN=PPCDC PE=1 SV=2) HSP 1 Score: 77.8 bits (190), Expect = 8.3e-14 Identity = 43/99 (43.43%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy Swiss-Prot
Match: Q8BZB2 (Phosphopantothenoylcysteine decarboxylase OS=Mus musculus OX=10090 GN=Ppcdc PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13 Identity = 44/103 (42.72%), Postives = 58/103 (56.31%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy TrEMBL
Match: A0A0A0LP03 (Flavoprotein domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G002720 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43 Identity = 84/103 (81.55%), Postives = 95/103 (92.23%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy TrEMBL
Match: A0A6J1HKV9 (phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111465476 PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.8e-43 Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy TrEMBL
Match: A0A5D3BIF0 (Putative phosphopantothenoylcysteine decarboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00630 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43 Identity = 86/103 (83.50%), Postives = 92/103 (89.32%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy TrEMBL
Match: A0A1S3CLH0 (probable phosphopantothenoylcysteine decarboxylase OS=Cucumis melo OX=3656 GN=LOC103502332 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 5.2e-43 Identity = 86/103 (83.50%), Postives = 92/103 (89.32%), Query Frame = 0
BLAST of CcUC06G127670 vs. ExPASy TrEMBL
Match: A0A6J1JAP4 (phosphopantothenoylcysteine decarboxylase-like OS=Cucurbita maxima OX=3661 GN=LOC111485088 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 8.8e-43 Identity = 83/103 (80.58%), Postives = 91/103 (88.35%), Query Frame = 0
BLAST of CcUC06G127670 vs. TAIR 10
Match: AT3G18030.1 (HAL3-like protein A ) HSP 1 Score: 148.3 bits (373), Expect = 3.6e-36 Identity = 66/103 (64.08%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of CcUC06G127670 vs. TAIR 10
Match: AT1G48605.1 (Flavoprotein ) HSP 1 Score: 146.4 bits (368), Expect = 1.4e-35 Identity = 65/103 (63.11%), Postives = 84/103 (81.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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