CcUC06G127390 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G127390
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr06: 29603448 .. 29605346 (-)
RNA-Seq ExpressionCcUC06G127390
SyntenyCcUC06G127390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGAGAAGAAGCGCAATTTTCACTTCCCTTAGACTGGCTAACTCGTTCTTTTCGACTCGGTCGTTATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTCTGTTTCTCATCAATCCCACTTTCCCCTCTTCAGAAGTAATCATCGTATTCTGTTTTTCTCGTCGAAGCCCCATTCGCTTCTCGAGCTTGTTTTGGCCAACGATTGGTCGGAAATGTTAGAAACTGAAATAGAGACGTTAAACCCTACACTCACACACGAAACTGTCGTCTATGTTTTGAAAAGACTCGATAAACAACCCCAAAAGGCCTCGGATTTCTTCAACTGGGCCTGTGGGAAAAATGGGTTTACTCAGAGTTCTTCGATTTATAGCATTTTGCTTAGGATTTTTGTTCAAAATGAATCCATGAAGCAGTTCTGGATTACGTTAAGGGTGATGAAAGAACAGGGGTTTTATCTAGATGAGGAAACTTATTTGACCATTTTAGGGGTTTTGAAAAGGGCAAAGAAGGCGGCAGATGCCACGGCTTTGACTCATTTTTATAATCGAATGCTGCAAGAAAATGCCATGGATAGTGTAGTGCAGAAGGTGGTTAATATTGTTTTAGGTTCAGATTGGAGTAGTGACGTTGCAGGAAAACTTGAGGAGCTTGGCGTTGCATTGTCAGATAATTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCATTGAAAGCCTTCAGTTTTTTCCATTGGGTTGGTTGTAGGCCAGATTATGATCATAACACAGTTACATTCAATGCAATTGCTAGGGTTCTCGGACAGGATGACTCAATTGAGGCATTTTGGGGTGTGATTGAACAAATGAAGAATGCTAACCATGAGATCGATATCGACACTTACGTAAAGATCTCCAGGCAGTTTCAGAGGAACAAGATGGTGGGTGATGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCATTACAGGATTGCAGTGTTCTTTTGCGGACCATCGCTGCTAGTGAAAATCCAGATTTGAGCTTGGTTTTTCGAGTCACCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATTTACGATGGAATCCATAGGTCGTTGACGAGCGCGGGAAAGTTCAATGAAGCGGAAAATATCATAAAGTCTATGAGAAGTGCAGGGTATGAGCCTGACAATGTTACATACAGCCAACTGGTGTTTGGACTTTGCAAGGCCAGGAGACTTGAGGAAGCTTGTAAAGTTCTGGACGAGATGGAAGCACAAGGATGCATTCCTGATATCAAGACTTGGACCATTTTAATTCAAGGACATTGTACTGCCAATGAACTCGATAATGCTTTAGTTTGTTTTGCTAAGATGATAGAGAAGAACTGTGATCCCGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTGGCCAGAAAAAGTTGGATGGTGCTTACCAGTTGCTGATTGAGTTGGTGAGTAAGGCTCATGTAAGACCATGGCAGGCAACATACAAACAGTTAATTGAAAAGCTTTTAGAAGTAAGGAAACTTGAGGAAGCTATTGCCCTTCTTAGTTTAATGAAGAAACAAAATTACCCACCTTTTTCAGAACCATTTGTTCAATATATCTCCAAGTTTGGTACTGTGGAGGATGCTACTGATTTTCTGAAGGTTCTGAGCACAAAAGAATATCCTTCCATATCTGCCTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCATATCCGAAAGCATAGTGAAATTTGCAAACTCTTTGGATCTGCAGAAAGCAAAACCAATTCTGCAACTCAATCTTCCTCCAATTCAATTGGAACTTAA

mRNA sequence

ATGACGAGAAGAAGCGCAATTTTCACTTCCCTTAGACTGGCTAACTCGTTCTTTTCGACTCGGTCGTTATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTCTGTTTCTCATCAATCCCACTTTCCCCTCTTCAGAAGTAATCATCGTATTCTGTTTTTCTCGTCGAAGCCCCATTCGCTTCTCGAGCTTGTTTTGGCCAACGATTGGTCGGAAATGTTAGAAACTGAAATAGAGACGTTAAACCCTACACTCACACACGAAACTGTCGTCTATGTTTTGAAAAGACTCGATAAACAACCCCAAAAGGCCTCGGATTTCTTCAACTGGGCCTGTGGGAAAAATGGGTTTACTCAGAGTTCTTCGATTTATAGCATTTTGCTTAGGATTTTTGTTCAAAATGAATCCATGAAGCAGTTCTGGATTACGTTAAGGGTGATGAAAGAACAGGGGTTTTATCTAGATGAGGAAACTTATTTGACCATTTTAGGGGTTTTGAAAAGGGCAAAGAAGGCGGCAGATGCCACGGCTTTGACTCATTTTTATAATCGAATGCTGCAAGAAAATGCCATGGATAGTGTAGTGCAGAAGGTGGTTAATATTGTTTTAGGTTCAGATTGGAGTAGTGACGTTGCAGGAAAACTTGAGGAGCTTGGCGTTGCATTGTCAGATAATTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCATTGAAAGCCTTCAGTTTTTTCCATTGGGTTGGTTGTAGGCCAGATTATGATCATAACACAGTTACATTCAATGCAATTGCTAGGGTTCTCGGACAGGATGACTCAATTGAGGCATTTTGGGGTGTGATTGAACAAATGAAGAATGCTAACCATGAGATCGATATCGACACTTACGTAAAGATCTCCAGGCAGTTTCAGAGGAACAAGATGGTGGGTGATGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCATTACAGGATTGCAGTGTTCTTTTGCGGACCATCGCTGCTAGTGAAAATCCAGATTTGAGCTTGGTTTTTCGAGTCACCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATTTACGATGGAATCCATAGGTCGTTGACGAGCGCGGGAAAGTTCAATGAAGCGGAAAATATCATAAAGTCTATGAGAAGTGCAGGGTATGAGCCTGACAATGTTACATACAGCCAACTGGTGTTTGGACTTTGCAAGGCCAGGAGACTTGAGGAAGCTTGTAAAGTTCTGGACGAGATGGAAGCACAAGGATGCATTCCTGATATCAAGACTTGGACCATTTTAATTCAAGGACATTGTACTGCCAATGAACTCGATAATGCTTTAGTTTGTTTTGCTAAGATGATAGAGAAGAACTGTGATCCCGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTGGCCAGAAAAAGTTGGATGGTGCTTACCAGTTGCTGATTGAGTTGGTGAGTAAGGCTCATGTAAGACCATGGCAGGCAACATACAAACAGTTAATTGAAAAGCTTTTAGAAGTAAGGAAACTTGAGGAAGCTATTGCCCTTCTTAGTTTAATGAAGAAACAAAATTACCCACCTTTTTCAGAACCATTTGTTCAATATATCTCCAAGTTTGGTACTGTGGAGGATGCTACTGATTTTCTGAAGGTTCTGAGCACAAAAGAATATCCTTCCATATCTGCCTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCATATCCGAAAGCATAGTGAAATTTGCAAACTCTTTGGATCTGCAGAAAGCAAAACCAATTCTGCAACTCAATCTTCCTCCAATTCAATTGGAACTTAA

Coding sequence (CDS)

ATGACGAGAAGAAGCGCAATTTTCACTTCCCTTAGACTGGCTAACTCGTTCTTTTCGACTCGGTCGTTATATCCCCAGGTGACTCGGTTTTCACCTTCTTCTTCTGTTTCTCATCAATCCCACTTTCCCCTCTTCAGAAGTAATCATCGTATTCTGTTTTTCTCGTCGAAGCCCCATTCGCTTCTCGAGCTTGTTTTGGCCAACGATTGGTCGGAAATGTTAGAAACTGAAATAGAGACGTTAAACCCTACACTCACACACGAAACTGTCGTCTATGTTTTGAAAAGACTCGATAAACAACCCCAAAAGGCCTCGGATTTCTTCAACTGGGCCTGTGGGAAAAATGGGTTTACTCAGAGTTCTTCGATTTATAGCATTTTGCTTAGGATTTTTGTTCAAAATGAATCCATGAAGCAGTTCTGGATTACGTTAAGGGTGATGAAAGAACAGGGGTTTTATCTAGATGAGGAAACTTATTTGACCATTTTAGGGGTTTTGAAAAGGGCAAAGAAGGCGGCAGATGCCACGGCTTTGACTCATTTTTATAATCGAATGCTGCAAGAAAATGCCATGGATAGTGTAGTGCAGAAGGTGGTTAATATTGTTTTAGGTTCAGATTGGAGTAGTGACGTTGCAGGAAAACTTGAGGAGCTTGGCGTTGCATTGTCAGATAATTTTGTAATTAGAGTGTTGAAGGAACTTCGAAATTCTCCATTGAAAGCCTTCAGTTTTTTCCATTGGGTTGGTTGTAGGCCAGATTATGATCATAACACAGTTACATTCAATGCAATTGCTAGGGTTCTCGGACAGGATGACTCAATTGAGGCATTTTGGGGTGTGATTGAACAAATGAAGAATGCTAACCATGAGATCGATATCGACACTTACGTAAAGATCTCCAGGCAGTTTCAGAGGAACAAGATGGTGGGTGATGCTGTCAAGCTTTATGAGCTTATGATGGATGGGCCATACAAGCCCTCATTACAGGATTGCAGTGTTCTTTTGCGGACCATCGCTGCTAGTGAAAATCCAGATTTGAGCTTGGTTTTTCGAGTCACCAAGAAATTCGAGGCTACAGGGTACAGTCTCTCCAAAGCTATTTACGATGGAATCCATAGGTCGTTGACGAGCGCGGGAAAGTTCAATGAAGCGGAAAATATCATAAAGTCTATGAGAAGTGCAGGGTATGAGCCTGACAATGTTACATACAGCCAACTGGTGTTTGGACTTTGCAAGGCCAGGAGACTTGAGGAAGCTTGTAAAGTTCTGGACGAGATGGAAGCACAAGGATGCATTCCTGATATCAAGACTTGGACCATTTTAATTCAAGGACATTGTACTGCCAATGAACTCGATAATGCTTTAGTTTGTTTTGCTAAGATGATAGAGAAGAACTGTGATCCCGATGCTGATCTTTTGGATGTGTTGATTAGTGGTTTCCTTGGCCAGAAAAAGTTGGATGGTGCTTACCAGTTGCTGATTGAGTTGGTGAGTAAGGCTCATGTAAGACCATGGCAGGCAACATACAAACAGTTAATTGAAAAGCTTTTAGAAGTAAGGAAACTTGAGGAAGCTATTGCCCTTCTTAGTTTAATGAAGAAACAAAATTACCCACCTTTTTCAGAACCATTTGTTCAATATATCTCCAAGTTTGGTACTGTGGAGGATGCTACTGATTTTCTGAAGGTTCTGAGCACAAAAGAATATCCTTCCATATCTGCCTATCTTCATATTTTTAATTCATTTTTTAATGAAGGCAGATATTCTGAGGCCAAAGATCTGCTCTTTAAATGCCCACATCATATCCGAAAGCATAGTGAAATTTGCAAACTCTTTGGATCTGCAGAAAGCAAAACCAATTCTGCAACTCAATCTTCCTCCAATTCAATTGGAACTTAA

Protein sequence

MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHSEICKLFGSAESKTNSATQSSSNSIGT
Homology
BLAST of CcUC06G127390 vs. NCBI nr
Match: XP_038880639.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Benincasa hispida])

HSP 1 Score: 1153.3 bits (2982), Expect = 0.0e+00
Identity = 574/632 (90.82%), Postives = 604/632 (95.57%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSS+SHQS  P FR NHR+LFFSSKPHS
Sbjct: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSISHQSLIPCFRCNHRVLFFSSKPHS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LLELVLANDWSEMLE+E+ETLNPTLTHETVVYVLKRLDKQPQKASDFFNW CGKNGFTQS
Sbjct: 61  LLELVLANDWSEMLESELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWVCGKNGFTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           SSIYSILLRIF QNESMKQFWITLRVMKEQGFYLDEETYLTI GVLK AKKAADATALTH
Sbjct: 121 SSIYSILLRIFAQNESMKQFWITLRVMKEQGFYLDEETYLTIFGVLKSAKKAADATALTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNR+L EN MDSVV+K+VNIVLGSDWSSD+A KLEELG+ALSDNFVIRVLKELRNSP K
Sbjct: 181 FYNRLLLENGMDSVVRKIVNIVLGSDWSSDIATKLEELGIALSDNFVIRVLKELRNSPSK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
           A SFFHWVG RPDY+HNTVT+NAIARVLG+D+SIE FWGVIE+MKNA+HEIDIDTY+KIS
Sbjct: 241 ALSFFHWVGSRPDYNHNTVTYNAIARVLGRDESIEEFWGVIEEMKNASHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQ++KM+GDAVKLYELMMDGPYKPSLQ+CS+LLRTIAA +NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLQECSILLRTIAAGDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKAIYDGIHRSLTSAGKF+EAENII SMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAIYDGIHRSLTSAGKFDEAENIINSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWTILIQG+C ANELD+ALVCFAKMIEKNC+PDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTILIQGYCNANELDSALVCFAKMIEKNCNPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           LGQKKLDGAYQLL ELV+KAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLTELVNKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
           SEPFVQYISKFGTVEDA DFLKVLS KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 SEPFVQYISKFGTVEDAVDFLKVLSLKEYPSMSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESKTNSATQSSSNSIGT 633
           HIRKHSEICKLFGSAESK    TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKITPTTQSSPNPIGT 632

BLAST of CcUC06G127390 vs. NCBI nr
Match: XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 559/638 (87.62%), Postives = 599/638 (93.89%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           M RR AI TSL LANS FSTRS + QVTRF P SS+SHQS FP F +NHRI+FFSSKPHS
Sbjct: 1   MARRKAILTSLTLANSLFSTRSSHSQVTRFLP-SSLSHQSRFPPFTTNHRIMFFSSKPHS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LLELVLANDWSE+LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFFNWACGKNG TQS
Sbjct: 61  LLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           S IYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
             SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLHIFNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESK------TNSATQSSSNSIGT 633
           HIRKHSEICKLFGSAESK      T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTPTTTTTTTQSSPNPIGT 637

BLAST of CcUC06G127390 vs. NCBI nr
Match: XP_022933685.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 557/635 (87.72%), Postives = 597/635 (94.02%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           M RR AI TSL LANS +STRS Y QVTRF P SS+SHQS FP F +NHRILFFSSKPHS
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLP-SSLSHQSRFPPFTTNHRILFFSSKPHS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LLELVLANDWSE LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFF+WACGKNG TQS
Sbjct: 61  LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           S IYSILLRI VQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
             SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESK---TNSATQSSSNSIGT 633
           HIRKHSEICKLFGSAESK   T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTTTTTTQSSPNPIGT 634

BLAST of CcUC06G127390 vs. NCBI nr
Match: XP_004138087.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sativus] >KGN63535.1 hypothetical protein Csa_013352 [Cucumis sativus])

HSP 1 Score: 1115.9 bits (2885), Expect = 0.0e+00
Identity = 556/632 (87.97%), Postives = 597/632 (94.46%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           MTRR+AIFTSLRLANSFFSTRS YPQVTRFSPSS VSHQS    F  NH +LFFSS P S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LL+LV  NDWSEMLETE+ETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWA GKNG TQS
Sbjct: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           SSIYS+LLRIFVQNESMK FWITLR+MKE+GFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV+IVLGSDWS+DV GKLEELG+ALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
           A SFFHWVGCRPDYDHNTV++NAIARVLG+DDSIEAFWGVIE+MK+ANHEIDIDTY+KIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQ++KM+G+AVKLYELMMDGPYKPSLQDCSVLLRTIAAS+NPDLSLV+RV KKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTS GKF++AENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEA 
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           KVLDEMEAQGCIPDIKTWTILIQGHC ANELD ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           L QKKL+GAYQLLIEL +KAHVRPWQATYKQLI+ LLEVRKLEEAIALL LMKKQNYPPF
Sbjct: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTV+DA DFLKVLS+KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESKTNSATQSSSNSIGT 633
           HIRKH+E+CKLFGSAES T +ATQSSSN I T
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632

BLAST of CcUC06G127390 vs. NCBI nr
Match: KAG6587441.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1113.6 bits (2879), Expect = 0.0e+00
Identity = 556/636 (87.42%), Postives = 596/636 (93.71%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           M RR AI TSL LANS +STRS Y QVTRF P SS+SHQS FP F +N RILFFSSKPHS
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLP-SSLSHQSRFPPFTTNRRILFFSSKPHS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LLELVLANDWSE LE E+ETLNPTLTHET+VYVLKRLDK+PQKASDFF+WACGKNG TQS
Sbjct: 61  LLELVLANDWSETLEAELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           S IYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
             SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESK----TNSATQSSSNSIGT 633
           HIRKHSEICKLFGSAESK    T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTPTTTTTQSSPNPIGT 635

BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match: Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 6.7e-204
Identity = 355/620 (57.26%), Postives = 462/620 (74.52%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILF--FSSKP 60
           M R  AI +SLR A S  STRS   +      S+  S    F +  S     F  FSSKP
Sbjct: 1   MYRSMAILSSLRHAYSQISTRSYLSRSKVGFSSNLSSPLDSFAIVPSRFLWKFRTFSSKP 60

Query: 61  HSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFT 120
            S+L+LVL NDWS+ +E  +   + +LTHET +YVL++L+K P+KA  F +W    +G +
Sbjct: 61  DSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLS 120

Query: 121 QSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATAL 180
            S+ +YSI+LRI VQ  SMK+FW+TLR MK+ GFYLDE+TY TI G L + K  ADA A+
Sbjct: 121 PSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAV 180

Query: 181 THFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSP 240
            HFY RML+ENAM  V  +V  +V   DWS +V  +L+E+ + LSDNFVIRVLKELR  P
Sbjct: 181 AHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHP 240

Query: 241 LKAFSFFHWV---GCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDT 300
           LKA +FFHWV   G    Y H+TVT+NA  RVL + +S+  FW V+++MK A +++D+DT
Sbjct: 241 LKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDT 300

Query: 301 YVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKK 360
           Y+K+SRQFQ+++M+ + VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LVFRV++K
Sbjct: 301 YIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRK 360

Query: 361 FEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARR 420
           +E+TG SLSKA+YDGIHRSLTS G+F+EAE I K+MR+AGYEPDN+TYSQLVFGLCKA+R
Sbjct: 361 YESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKR 420

Query: 421 LEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDV 480
           LEEA  VLD+MEAQGC PDIKTWTILIQGHC  NELD AL CFA M+EK  D D++LLDV
Sbjct: 421 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDV 480

Query: 481 LISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQ 540
           LI GF+   K +GA   L+E+V  A+V+PWQ+TYK LI+KLL+++K EEA+ LL +MKKQ
Sbjct: 481 LIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540

Query: 541 NYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLL 600
           NYP ++E F  Y++KFGT+EDA  FL VLS+K+ PS +AY H+  +F+ EGR ++AK+LL
Sbjct: 541 NYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600

Query: 601 FKCPHHIRKHSEICKLFGSA 616
           F CPHH + H +I +LFG+A
Sbjct: 601 FICPHHFKTHPKISELFGAA 620

BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match: Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.8e-82
Identity = 171/546 (31.32%), Postives = 296/546 (54.21%), Query Frame = 0

Query: 77  EIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQSSSIYSILLRIFVQNES 136
           E+++ +  ++HE  + VL+ L+  P  A  FF W         SS  Y+ +LRIF  N  
Sbjct: 100 ELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGL 159

Query: 137 MKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQ 196
           + +FW  +  MK++G  +       +    K+     D   L   +     +N++D V  
Sbjct: 160 VDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCN 219

Query: 197 KVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDH 256
           +V  IV+   W +DV  +L +L +    + V  VL++L   P KA  FF W+     + H
Sbjct: 220 RVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKH 279

Query: 257 NTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVKLY 316
           +  T+NA+ARVLG++  ++ F  +IE++++A +E++++TYV++S +F + KM+ +AV+L+
Sbjct: 280 DEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELF 339

Query: 317 ELMMDGPYK--PSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHRS 376
           E  M G     P+   CS+LL+ I  ++  D+ L  R  K +   G  +   +   + +S
Sbjct: 340 EFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKS 399

Query: 377 LTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPD 436
           L S  +F ++  ++K+M   GY P     S +  GL +  + +EA ++++ MEA G   D
Sbjct: 400 LRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLD 459

Query: 437 IKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD-LLDVLISGFLGQKKLDGAYQLL 496
            K    L++GHC A +L+ A  CF KMI K     A    + L+  +    +    Y+L 
Sbjct: 460 DKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLF 519

Query: 497 IELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEAIALLSLMKKQNYPPFSEPFVQYI 556
            ELV +  ++PW +TYK ++  LL  +       EEA++LL +M+   +PPF +PF+ Y+
Sbjct: 520 SELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYL 579

Query: 557 SKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHSEI 615
           S  GT  +A  FLK +++K++PS S  L +F +     R+SEA+DLL   P +IR+++E+
Sbjct: 580 SNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEV 639

BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match: Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-79
Identity = 165/569 (29.00%), Postives = 302/569 (53.08%), Query Frame = 0

Query: 55  SSKPHSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGK 114
           SS   +++++       + +  E+E+    ++ +  + VL++L+  P  A  FF W    
Sbjct: 84  SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143

Query: 115 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAAD 174
           +    SS  Y+++LRI   N  + +FW  + VMK++G  L       +    ++    +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203

Query: 175 ATALTHFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKEL 234
              L   +     +N+ ++V  +V  IV+  +W  DV  ++ +L V    + V  +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263

Query: 235 RNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDID 294
              P KA  FF W+     + H+  T+NA+ARVLG++  ++ F  ++ +M++A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323

Query: 295 TYVKISRQFQRNKMVGDAVKLYELMMDG---PYKPSLQDCSVLLRTIAASENPDLSLVFR 354
           TYV++S +F + K++ +AV L+E+ M G      P+     +LL+ I  ++  D+ L  R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383

Query: 355 VTKKFEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLC 414
             K +   G +L+ ++   + +SL S  +  ++  ++K M+  GY P     S +   L 
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443

Query: 415 KARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD 474
           +  + +EA + +D ME+ G   D K    L++G+C +  LD ALVCF KM+       AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503

Query: 475 L-LDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEA 534
              + L+  +  + ++  AY+LL   V+K  ++P  +TYK L+  LL  +       EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563

Query: 535 IALLSLMKKQNYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNE 594
           ++LL +MK   +PPF +PF+ Y S  G   +A  FLK +++  +P IS  L +F +    
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623

Query: 595 GRYSEAKDLLFKCPHHIRKHSEICKLFGS 615
            R+SEA+DLL  CP++IR + ++ +LF +
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNT 652

BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.0e-31
Identity = 94/386 (24.35%), Postives = 176/386 (45.60%), Query Frame = 0

Query: 215 LEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSI 274
           L E GV L    + RVL    ++    + FF W   +P Y H+   + ++ ++L +    
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQF 163

Query: 275 EAFWGVIEQMKNANHE-IDIDTYVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSV 334
            A WG+IE+M+  N + I+ + +V + ++F    MV  A+++ + M    ++P       
Sbjct: 164 GAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGC 223

Query: 335 LLRTIAASENPDLSLVFRVTKKFE--ATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSM 394
           LL  +    +     V    K FE     + ++   +  +       GK  EA+ ++  M
Sbjct: 224 LLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 283

Query: 395 RSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANEL 454
             AG+EPD V Y+ L+ G   A ++ +A  +L +M  +G  P+   +T+LIQ  C  + +
Sbjct: 284 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 343

Query: 455 DNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQ 514
           + A+  F +M    C+ D      L+SGF    K+D  Y +L +++ K  + P + TY  
Sbjct: 344 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMH 403

Query: 515 LIEKLLEVRKLEEAIALLSLMKKQNYPP---FSEPFVQYISKFGTVEDATDFLKVLSTKE 574
           ++    +    EE + L+  M++  Y P        ++   K G V++A      +    
Sbjct: 404 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 463

Query: 575 Y-PSISAYLHIFNSFFNEGRYSEAKD 594
             P +  ++ + N   ++G   EA D
Sbjct: 464 LSPGVDTFVIMINGLASQGCLLEASD 483

BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 7.5e-30
Identity = 97/402 (24.13%), Postives = 189/402 (47.01%), Query Frame = 0

Query: 195 VQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDY 254
           V KV++ +   D + +    L+E+ + LS + ++ VL+  R++   AF FF W   R  +
Sbjct: 134 VCKVIDELFALDRNMEAV--LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 255 DHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVK 314
            H++ T+N++  +L +    E    V+E+M      + ++T+    + F   K    AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253

Query: 315 LYELMMDGPYKPSLQDCSVLLRTIA-ASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHR 374
           ++ELM    +K  ++  + LL ++  A    +  ++F   K+     ++ +   Y  +  
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313

Query: 375 SLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIP 434
                    EA  I   M   G +PD V ++ ++ GL ++R+  +A K+   M+++G  P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373

Query: 435 DIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLL 494
           +++++TI+I+  C  + ++ A+  F  M++    PDA +   LI+GF  QKKLD  Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433

Query: 495 IELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPFSEPFVQYISKFGT 554
            E+  K H  P   TY  LI+ +   +  E A  + + M +    P    F   +  +  
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493

Query: 555 VED----ATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEA 592
             +       + +++     P  ++Y  +      EG+  EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527

BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match: A0A6J1F5I7 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441023 PE=3 SV=1)

HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 557/635 (87.72%), Postives = 597/635 (94.02%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           M RR AI TSL LANS +STRS Y QVTRF P SS+SHQS FP F +NHRILFFSSKPHS
Sbjct: 1   MARRKAILTSLTLANSLYSTRSCYSQVTRFLP-SSLSHQSRFPPFTTNHRILFFSSKPHS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LLELVLANDWSE LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFF+WACGKNG TQS
Sbjct: 61  LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           S IYSILLRI VQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
             SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESK---TNSATQSSSNSIGT 633
           HIRKHSEICKLFGSAESK   T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTTTTTTQSSPNPIGT 634

BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match: A0A0A0LNT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)

HSP 1 Score: 1115.9 bits (2885), Expect = 0.0e+00
Identity = 556/632 (87.97%), Postives = 597/632 (94.46%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           MTRR+AIFTSLRLANSFFSTRS YPQVTRFSPSS VSHQS    F  NH +LFFSS P S
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LL+LV  NDWSEMLETE+ETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWA GKNG TQS
Sbjct: 61  LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           SSIYS+LLRIFVQNESMK FWITLR+MKE+GFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQ+NAMDSVVQKVV+IVLGSDWS+DV GKLEELG+ALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
           A SFFHWVGCRPDYDHNTV++NAIARVLG+DDSIEAFWGVIE+MK+ANHEIDIDTY+KIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQ++KM+G+AVKLYELMMDGPYKPSLQDCSVLLRTIAAS+NPDLSLV+RV KKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTS GKF++AENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEA 
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           KVLDEMEAQGCIPDIKTWTILIQGHC ANELD ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           L QKKL+GAYQLLIEL +KAHVRPWQATYKQLI+ LLEVRKLEEAIALL LMKKQNYPPF
Sbjct: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTV+DA DFLKVLS+KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESKTNSATQSSSNSIGT 633
           HIRKH+E+CKLFGSAES T +ATQSSSN I T
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632

BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match: A0A6J1I0W9 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468041 PE=4 SV=1)

HSP 1 Score: 1113.6 bits (2879), Expect = 0.0e+00
Identity = 557/637 (87.44%), Postives = 595/637 (93.41%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           M RR AI TSL L NS FSTRS Y QVTRF P SS+SHQS FP F +NHRILFFSSKPHS
Sbjct: 1   MARRKAILTSLMLENSLFSTRSSYSQVTRFLP-SSLSHQSRFPPFTTNHRILFFSSKPHS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LLELVLANDWSE+LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFFNWACGKNG TQS
Sbjct: 61  LLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           S IYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIR LKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRALKELRNFPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
             SFFHWVGCR DYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRSDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQR KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRTKMIGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKA+YDGIHRSLTSAGKF+EAENI+KS+R+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSLRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LLSLMKKQNYPP 
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLSLMKKQNYPPS 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLHIFNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESK-----TNSATQSSSNSIGT 633
           HIRKHSEICKLFGSAESK     T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTTTTTTTTQSSPNPIGT 636

BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match: A0A6J1C114 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007295 PE=4 SV=1)

HSP 1 Score: 1108.2 bits (2865), Expect = 0.0e+00
Identity = 550/635 (86.61%), Postives = 597/635 (94.02%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFF-----STRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFS 60
           MTRR+AI TSLRLANSF      STRSLYPQVTRFSP +SVSH+SHF  F+S H +LFFS
Sbjct: 1   MTRRTAILTSLRLANSFLSAQISSTRSLYPQVTRFSP-TSVSHRSHFLDFKSTHPLLFFS 60

Query: 61  SKPHSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKN 120
           SKPHSLL+ VLANDWS+ LE E+ETLNPTLTHETVVYVLKRLDK+PQKAS FFNWACGKN
Sbjct: 61  SKPHSLLQFVLANDWSQDLENELETLNPTLTHETVVYVLKRLDKEPQKASGFFNWACGKN 120

Query: 121 GFTQSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADA 180
           GFTQSSSIYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLT+LG+L+RAKKAADA
Sbjct: 121 GFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTMLGILRRAKKAADA 180

Query: 181 TALTHFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELR 240
           TALTHFYNRMLQENAMDSVVQKVVNIVLGS+WSSDVA  LE LG+ LSDNFVIR LKELR
Sbjct: 181 TALTHFYNRMLQENAMDSVVQKVVNIVLGSEWSSDVAENLEGLGIVLSDNFVIRALKELR 240

Query: 241 NSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDT 300
           N PLKA SFFHWVGCR D+DHNTVT+NAIARVLG+DDSIEAFWGV+++MKNA HEIDIDT
Sbjct: 241 NFPLKALSFFHWVGCRLDFDHNTVTYNAIARVLGRDDSIEAFWGVVDEMKNAGHEIDIDT 300

Query: 301 YVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKK 360
           Y+KISRQFQR+KM+G+AVKLYELMMDGPY+PSLQDCSVLLR+I+AS+NPDLSLVFRV KK
Sbjct: 301 YIKISRQFQRSKMMGEAVKLYELMMDGPYRPSLQDCSVLLRSISASDNPDLSLVFRVAKK 360

Query: 361 FEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARR 420
           +EATGYSLSKAIYDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARR
Sbjct: 361 YEATGYSLSKAIYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARR 420

Query: 421 LEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDV 480
           LEEACK+LDEMEA+GCIPDIKTWTILIQGHCT NE+D ALVCFAKMIE+NCDPDADLLDV
Sbjct: 421 LEEACKLLDEMEAEGCIPDIKTWTILIQGHCTTNEVDKALVCFAKMIERNCDPDADLLDV 480

Query: 481 LISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQ 540
           LI GFLGQ+KLDGAYQLLIELV+KAH+RPWQATYKQLIEKLLEVRKLEEAI LL LMKKQ
Sbjct: 481 LIDGFLGQRKLDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKLEEAITLLRLMKKQ 540

Query: 541 NYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLL 600
           NYPPFSEPFV YISKFGTVEDA DFLKVLS+KEYPS+SAYLH+FNSFFNEGR SEAKDLL
Sbjct: 541 NYPPFSEPFVLYISKFGTVEDAADFLKVLSSKEYPSVSAYLHVFNSFFNEGRCSEAKDLL 600

Query: 601 FKCPHHIRKHSEICKLFGSAESKTNSATQSSSNSI 631
           FKCPHHIRKHSE+CKLFGSAESK+  AT+SSS  +
Sbjct: 601 FKCPHHIRKHSEVCKLFGSAESKSTDATKSSSKPL 634

BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match: A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 546/623 (87.64%), Postives = 592/623 (95.02%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
           MTRR+AIFTSLRLANSFFSTRS YPQVTRFSPSS VSHQS  PLFR NH +LFFSS PHS
Sbjct: 1   MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPLFRINHPVLFFSSNPHS 60

Query: 61  LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
           LLELV  NDWSEMLETE+ETLNPTLTHETVVYVLKRLDKQPQKASDFFNWA GKNG TQS
Sbjct: 61  LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120

Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
           SSIYSILLRIFVQNESMK FWITLR+MKE+GFYLDEETYLTILGVL++AKKAADATAL H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180

Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
           FYNRMLQENAMDSVVQKVV+IVLGSDWS+DVAGKLEELG+ALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240

Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
           A SFF+WVGCRPDYDHNTV++NAIARVL ++DSI+AFWGVIE+MKNA+ +IDIDTY+KIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300

Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
           RQFQ++KM+GDAVKLYELMMDGPYKPSL DCS+LLRTIAAS+NPDLSLV+RV KKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360

Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
           YSLSKAIYDGIHRSLTS GKF++AE+I+KSMR+AGYEPDNVT+SQLVFGLCKARRL+EA 
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420

Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
           +VLDEMEAQGCIPDIKTWT+LIQGHC AN+LD ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480

Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
           L QKKLDGAYQLLIEL +KAHVRPWQATYK LI+ LLEVRKLEEA+ALL LMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540

Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
            EPFVQYISKFGTV+DA DFLKVLS+KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600

Query: 601 HIRKHSEICKLFGSAESKTNSAT 624
           HIRKH+E+CKLFGSAESKT  AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623

BLAST of CcUC06G127390 vs. TAIR 10
Match: AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 711.8 bits (1836), Expect = 4.8e-205
Identity = 355/620 (57.26%), Postives = 462/620 (74.52%), Query Frame = 0

Query: 1   MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILF--FSSKP 60
           M R  AI +SLR A S  STRS   +      S+  S    F +  S     F  FSSKP
Sbjct: 1   MYRSMAILSSLRHAYSQISTRSYLSRSKVGFSSNLSSPLDSFAIVPSRFLWKFRTFSSKP 60

Query: 61  HSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFT 120
            S+L+LVL NDWS+ +E  +   + +LTHET +YVL++L+K P+KA  F +W    +G +
Sbjct: 61  DSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLS 120

Query: 121 QSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATAL 180
            S+ +YSI+LRI VQ  SMK+FW+TLR MK+ GFYLDE+TY TI G L + K  ADA A+
Sbjct: 121 PSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAV 180

Query: 181 THFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSP 240
            HFY RML+ENAM  V  +V  +V   DWS +V  +L+E+ + LSDNFVIRVLKELR  P
Sbjct: 181 AHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHP 240

Query: 241 LKAFSFFHWV---GCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDT 300
           LKA +FFHWV   G    Y H+TVT+NA  RVL + +S+  FW V+++MK A +++D+DT
Sbjct: 241 LKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDT 300

Query: 301 YVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKK 360
           Y+K+SRQFQ+++M+ + VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LVFRV++K
Sbjct: 301 YIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRK 360

Query: 361 FEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARR 420
           +E+TG SLSKA+YDGIHRSLTS G+F+EAE I K+MR+AGYEPDN+TYSQLVFGLCKA+R
Sbjct: 361 YESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKR 420

Query: 421 LEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDV 480
           LEEA  VLD+MEAQGC PDIKTWTILIQGHC  NELD AL CFA M+EK  D D++LLDV
Sbjct: 421 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDV 480

Query: 481 LISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQ 540
           LI GF+   K +GA   L+E+V  A+V+PWQ+TYK LI+KLL+++K EEA+ LL +MKKQ
Sbjct: 481 LIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540

Query: 541 NYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLL 600
           NYP ++E F  Y++KFGT+EDA  FL VLS+K+ PS +AY H+  +F+ EGR ++AK+LL
Sbjct: 541 NYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600

Query: 601 FKCPHHIRKHSEICKLFGSA 616
           F CPHH + H +I +LFG+A
Sbjct: 601 FICPHHFKTHPKISELFGAA 620

BLAST of CcUC06G127390 vs. TAIR 10
Match: AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 307.4 bits (786), Expect = 2.7e-83
Identity = 171/546 (31.32%), Postives = 296/546 (54.21%), Query Frame = 0

Query: 77  EIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQSSSIYSILLRIFVQNES 136
           E+++ +  ++HE  + VL+ L+  P  A  FF W         SS  Y+ +LRIF  N  
Sbjct: 100 ELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGL 159

Query: 137 MKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQ 196
           + +FW  +  MK++G  +       +    K+     D   L   +     +N++D V  
Sbjct: 160 VDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCN 219

Query: 197 KVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDH 256
           +V  IV+   W +DV  +L +L +    + V  VL++L   P KA  FF W+     + H
Sbjct: 220 RVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKH 279

Query: 257 NTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVKLY 316
           +  T+NA+ARVLG++  ++ F  +IE++++A +E++++TYV++S +F + KM+ +AV+L+
Sbjct: 280 DEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELF 339

Query: 317 ELMMDGPYK--PSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHRS 376
           E  M G     P+   CS+LL+ I  ++  D+ L  R  K +   G  +   +   + +S
Sbjct: 340 EFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKS 399

Query: 377 LTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPD 436
           L S  +F ++  ++K+M   GY P     S +  GL +  + +EA ++++ MEA G   D
Sbjct: 400 LRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLD 459

Query: 437 IKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD-LLDVLISGFLGQKKLDGAYQLL 496
            K    L++GHC A +L+ A  CF KMI K     A    + L+  +    +    Y+L 
Sbjct: 460 DKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLF 519

Query: 497 IELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEAIALLSLMKKQNYPPFSEPFVQYI 556
            ELV +  ++PW +TYK ++  LL  +       EEA++LL +M+   +PPF +PF+ Y+
Sbjct: 520 SELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYL 579

Query: 557 SKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHSEI 615
           S  GT  +A  FLK +++K++PS S  L +F +     R+SEA+DLL   P +IR+++E+
Sbjct: 580 SNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEV 639

BLAST of CcUC06G127390 vs. TAIR 10
Match: AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 298.5 bits (763), Expect = 1.3e-80
Identity = 165/569 (29.00%), Postives = 302/569 (53.08%), Query Frame = 0

Query: 55  SSKPHSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGK 114
           SS   +++++       + +  E+E+    ++ +  + VL++L+  P  A  FF W    
Sbjct: 84  SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143

Query: 115 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAAD 174
           +    SS  Y+++LRI   N  + +FW  + VMK++G  L       +    ++    +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203

Query: 175 ATALTHFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKEL 234
              L   +     +N+ ++V  +V  IV+  +W  DV  ++ +L V    + V  +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263

Query: 235 RNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDID 294
              P KA  FF W+     + H+  T+NA+ARVLG++  ++ F  ++ +M++A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323

Query: 295 TYVKISRQFQRNKMVGDAVKLYELMMDG---PYKPSLQDCSVLLRTIAASENPDLSLVFR 354
           TYV++S +F + K++ +AV L+E+ M G      P+     +LL+ I  ++  D+ L  R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383

Query: 355 VTKKFEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLC 414
             K +   G +L+ ++   + +SL S  +  ++  ++K M+  GY P     S +   L 
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443

Query: 415 KARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD 474
           +  + +EA + +D ME+ G   D K    L++G+C +  LD ALVCF KM+       AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503

Query: 475 L-LDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEA 534
              + L+  +  + ++  AY+LL   V+K  ++P  +TYK L+  LL  +       EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563

Query: 535 IALLSLMKKQNYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNE 594
           ++LL +MK   +PPF +PF+ Y S  G   +A  FLK +++  +P IS  L +F +    
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623

Query: 595 GRYSEAKDLLFKCPHHIRKHSEICKLFGS 615
            R+SEA+DLL  CP++IR + ++ +LF +
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNT 652

BLAST of CcUC06G127390 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 137.9 bits (346), Expect = 2.8e-32
Identity = 94/386 (24.35%), Postives = 176/386 (45.60%), Query Frame = 0

Query: 215 LEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSI 274
           L E GV L    + RVL    ++    + FF W   +P Y H+   + ++ ++L +    
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQF 163

Query: 275 EAFWGVIEQMKNANHE-IDIDTYVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSV 334
            A WG+IE+M+  N + I+ + +V + ++F    MV  A+++ + M    ++P       
Sbjct: 164 GAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGC 223

Query: 335 LLRTIAASENPDLSLVFRVTKKFE--ATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSM 394
           LL  +    +     V    K FE     + ++   +  +       GK  EA+ ++  M
Sbjct: 224 LLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 283

Query: 395 RSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANEL 454
             AG+EPD V Y+ L+ G   A ++ +A  +L +M  +G  P+   +T+LIQ  C  + +
Sbjct: 284 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 343

Query: 455 DNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQ 514
           + A+  F +M    C+ D      L+SGF    K+D  Y +L +++ K  + P + TY  
Sbjct: 344 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMH 403

Query: 515 LIEKLLEVRKLEEAIALLSLMKKQNYPP---FSEPFVQYISKFGTVEDATDFLKVLSTKE 574
           ++    +    EE + L+  M++  Y P        ++   K G V++A      +    
Sbjct: 404 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 463

Query: 575 Y-PSISAYLHIFNSFFNEGRYSEAKD 594
             P +  ++ + N   ++G   EA D
Sbjct: 464 LSPGVDTFVIMINGLASQGCLLEASD 483

BLAST of CcUC06G127390 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 133.7 bits (335), Expect = 5.4e-31
Identity = 97/402 (24.13%), Postives = 189/402 (47.01%), Query Frame = 0

Query: 195 VQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDY 254
           V KV++ +   D + +    L+E+ + LS + ++ VL+  R++   AF FF W   R  +
Sbjct: 134 VCKVIDELFALDRNMEAV--LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193

Query: 255 DHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVK 314
            H++ T+N++  +L +    E    V+E+M      + ++T+    + F   K    AV 
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253

Query: 315 LYELMMDGPYKPSLQDCSVLLRTIA-ASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHR 374
           ++ELM    +K  ++  + LL ++  A    +  ++F   K+     ++ +   Y  +  
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313

Query: 375 SLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIP 434
                    EA  I   M   G +PD V ++ ++ GL ++R+  +A K+   M+++G  P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373

Query: 435 DIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLL 494
           +++++TI+I+  C  + ++ A+  F  M++    PDA +   LI+GF  QKKLD  Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433

Query: 495 IELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPFSEPFVQYISKFGT 554
            E+  K H  P   TY  LI+ +   +  E A  + + M +    P    F   +  +  
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493

Query: 555 VED----ATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEA 592
             +       + +++     P  ++Y  +      EG+  EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038880639.10.0e+0090.82pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Benincasa ... [more]
XP_023530746.10.0e+0087.62pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
XP_022933685.10.0e+0087.72pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... [more]
XP_004138087.10.0e+0087.97pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sa... [more]
KAG6587441.10.0e+0087.42Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
Match NameE-valueIdentityDescription
Q9STK56.7e-20457.26Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... [more]
Q9M8913.8e-8231.32Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... [more]
Q8LPF11.8e-7929.00Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... [more]
Q9FH874.0e-3124.35Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
Q9LZP37.5e-3024.13Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1F5I70.0e+0087.72pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... [more]
A0A0A0LNT70.0e+0087.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1[more]
A0A6J1I0W90.0e+0087.44pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... [more]
A0A6J1C1140.0e+0086.61pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordic... [more]
A0A5D3BGX00.0e+0087.64Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT3G48250.14.8e-20557.26Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G02490.12.7e-8331.32Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15980.11.3e-8029.00Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G65820.12.8e-3224.35Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G62470.15.4e-3124.13Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 433..470
e-value: 1.6E-7
score: 31.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 437..470
e-value: 1.6E-6
score: 25.9
coord: 401..435
e-value: 7.4E-10
score: 36.4
coord: 373..399
e-value: 0.0018
score: 16.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 508..536
e-value: 1.1
score: 9.6
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 395..427
e-value: 3.7E-12
score: 45.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 11.016164
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 12.912469
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 9.054091
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 60..206
e-value: 3.2E-9
score: 38.4
coord: 218..343
e-value: 9.9E-13
score: 49.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 344..504
e-value: 1.1E-33
score: 118.9
IPR044578Pentatricopeptide repeat-containing protein BIR6-likePANTHERPTHR47003OS01G0970900 PROTEINcoord: 1..615
NoneNo IPR availablePANTHERPTHR47003:SF2OS01G0970900 PROTEINcoord: 1..615

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G127390.1CcUC06G127390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
cellular_component GO:0005739 mitochondrion
molecular_function GO:0005515 protein binding