Homology
BLAST of CcUC06G127390 vs. NCBI nr
Match:
XP_038880639.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Benincasa hispida])
HSP 1 Score: 1153.3 bits (2982), Expect = 0.0e+00
Identity = 574/632 (90.82%), Postives = 604/632 (95.57%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSS+SHQS P FR NHR+LFFSSKPHS
Sbjct: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSISHQSLIPCFRCNHRVLFFSSKPHS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LLELVLANDWSEMLE+E+ETLNPTLTHETVVYVLKRLDKQPQKASDFFNW CGKNGFTQS
Sbjct: 61 LLELVLANDWSEMLESELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWVCGKNGFTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
SSIYSILLRIF QNESMKQFWITLRVMKEQGFYLDEETYLTI GVLK AKKAADATALTH
Sbjct: 121 SSIYSILLRIFAQNESMKQFWITLRVMKEQGFYLDEETYLTIFGVLKSAKKAADATALTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNR+L EN MDSVV+K+VNIVLGSDWSSD+A KLEELG+ALSDNFVIRVLKELRNSP K
Sbjct: 181 FYNRLLLENGMDSVVRKIVNIVLGSDWSSDIATKLEELGIALSDNFVIRVLKELRNSPSK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
A SFFHWVG RPDY+HNTVT+NAIARVLG+D+SIE FWGVIE+MKNA+HEIDIDTY+KIS
Sbjct: 241 ALSFFHWVGSRPDYNHNTVTYNAIARVLGRDESIEEFWGVIEEMKNASHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQ++KM+GDAVKLYELMMDGPYKPSLQ+CS+LLRTIAA +NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLQECSILLRTIAAGDNPDLSLVFRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKAIYDGIHRSLTSAGKF+EAENII SMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAIYDGIHRSLTSAGKFDEAENIINSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
+VLDEMEAQGCIPDIKTWTILIQG+C ANELD+ALVCFAKMIEKNC+PDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTILIQGYCNANELDSALVCFAKMIEKNCNPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
LGQKKLDGAYQLL ELV+KAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLTELVNKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
SEPFVQYISKFGTVEDA DFLKVLS KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 SEPFVQYISKFGTVEDAVDFLKVLSLKEYPSMSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESKTNSATQSSSNSIGT 633
HIRKHSEICKLFGSAESK TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKITPTTQSSPNPIGT 632
BLAST of CcUC06G127390 vs. NCBI nr
Match:
XP_023530746.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1119.0 bits (2893), Expect = 0.0e+00
Identity = 559/638 (87.62%), Postives = 599/638 (93.89%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
M RR AI TSL LANS FSTRS + QVTRF P SS+SHQS FP F +NHRI+FFSSKPHS
Sbjct: 1 MARRKAILTSLTLANSLFSTRSSHSQVTRFLP-SSLSHQSRFPPFTTNHRIMFFSSKPHS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LLELVLANDWSE+LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFFNWACGKNG TQS
Sbjct: 61 LLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
S IYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLQSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
+VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLHIFNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESK------TNSATQSSSNSIGT 633
HIRKHSEICKLFGSAESK T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTPTTTTTTTQSSPNPIGT 637
BLAST of CcUC06G127390 vs. NCBI nr
Match:
XP_022933685.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 557/635 (87.72%), Postives = 597/635 (94.02%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
M RR AI TSL LANS +STRS Y QVTRF P SS+SHQS FP F +NHRILFFSSKPHS
Sbjct: 1 MARRKAILTSLTLANSLYSTRSCYSQVTRFLP-SSLSHQSRFPPFTTNHRILFFSSKPHS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LLELVLANDWSE LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFF+WACGKNG TQS
Sbjct: 61 LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
S IYSILLRI VQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
+VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESK---TNSATQSSSNSIGT 633
HIRKHSEICKLFGSAESK T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTTTTTTQSSPNPIGT 634
BLAST of CcUC06G127390 vs. NCBI nr
Match:
XP_004138087.1 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sativus] >KGN63535.1 hypothetical protein Csa_013352 [Cucumis sativus])
HSP 1 Score: 1115.9 bits (2885), Expect = 0.0e+00
Identity = 556/632 (87.97%), Postives = 597/632 (94.46%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
MTRR+AIFTSLRLANSFFSTRS YPQVTRFSPSS VSHQS F NH +LFFSS P S
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LL+LV NDWSEMLETE+ETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWA GKNG TQS
Sbjct: 61 LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
SSIYS+LLRIFVQNESMK FWITLR+MKE+GFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQ+NAMDSVVQKVV+IVLGSDWS+DV GKLEELG+ALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
A SFFHWVGCRPDYDHNTV++NAIARVLG+DDSIEAFWGVIE+MK+ANHEIDIDTY+KIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQ++KM+G+AVKLYELMMDGPYKPSLQDCSVLLRTIAAS+NPDLSLV+RV KKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKA+YDGIHRSLTS GKF++AENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEA
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
KVLDEMEAQGCIPDIKTWTILIQGHC ANELD ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
L QKKL+GAYQLLIEL +KAHVRPWQATYKQLI+ LLEVRKLEEAIALL LMKKQNYPPF
Sbjct: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTV+DA DFLKVLS+KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESKTNSATQSSSNSIGT 633
HIRKH+E+CKLFGSAES T +ATQSSSN I T
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632
BLAST of CcUC06G127390 vs. NCBI nr
Match:
KAG6587441.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1113.6 bits (2879), Expect = 0.0e+00
Identity = 556/636 (87.42%), Postives = 596/636 (93.71%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
M RR AI TSL LANS +STRS Y QVTRF P SS+SHQS FP F +N RILFFSSKPHS
Sbjct: 1 MARRKAILTSLTLANSLYSTRSCYSQVTRFLP-SSLSHQSRFPPFTTNRRILFFSSKPHS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LLELVLANDWSE LE E+ETLNPTLTHET+VYVLKRLDK+PQKASDFF+WACGKNG TQS
Sbjct: 61 LLELVLANDWSETLEAELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
S IYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
+VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESK----TNSATQSSSNSIGT 633
HIRKHSEICKLFGSAESK T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTPTTTTTQSSPNPIGT 635
BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match:
Q9STK5 (Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g48250 PE=2 SV=1)
HSP 1 Score: 711.8 bits (1836), Expect = 6.7e-204
Identity = 355/620 (57.26%), Postives = 462/620 (74.52%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILF--FSSKP 60
M R AI +SLR A S STRS + S+ S F + S F FSSKP
Sbjct: 1 MYRSMAILSSLRHAYSQISTRSYLSRSKVGFSSNLSSPLDSFAIVPSRFLWKFRTFSSKP 60
Query: 61 HSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFT 120
S+L+LVL NDWS+ +E + + +LTHET +YVL++L+K P+KA F +W +G +
Sbjct: 61 DSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLS 120
Query: 121 QSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATAL 180
S+ +YSI+LRI VQ SMK+FW+TLR MK+ GFYLDE+TY TI G L + K ADA A+
Sbjct: 121 PSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAV 180
Query: 181 THFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSP 240
HFY RML+ENAM V +V +V DWS +V +L+E+ + LSDNFVIRVLKELR P
Sbjct: 181 AHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHP 240
Query: 241 LKAFSFFHWV---GCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDT 300
LKA +FFHWV G Y H+TVT+NA RVL + +S+ FW V+++MK A +++D+DT
Sbjct: 241 LKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDT 300
Query: 301 YVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKK 360
Y+K+SRQFQ+++M+ + VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LVFRV++K
Sbjct: 301 YIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRK 360
Query: 361 FEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARR 420
+E+TG SLSKA+YDGIHRSLTS G+F+EAE I K+MR+AGYEPDN+TYSQLVFGLCKA+R
Sbjct: 361 YESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKR 420
Query: 421 LEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDV 480
LEEA VLD+MEAQGC PDIKTWTILIQGHC NELD AL CFA M+EK D D++LLDV
Sbjct: 421 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDV 480
Query: 481 LISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQ 540
LI GF+ K +GA L+E+V A+V+PWQ+TYK LI+KLL+++K EEA+ LL +MKKQ
Sbjct: 481 LIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Query: 541 NYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLL 600
NYP ++E F Y++KFGT+EDA FL VLS+K+ PS +AY H+ +F+ EGR ++AK+LL
Sbjct: 541 NYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Query: 601 FKCPHHIRKHSEICKLFGSA 616
F CPHH + H +I +LFG+A
Sbjct: 601 FICPHHFKTHPKISELFGAA 620
BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match:
Q9M891 (Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g02490 PE=2 SV=1)
HSP 1 Score: 307.4 bits (786), Expect = 3.8e-82
Identity = 171/546 (31.32%), Postives = 296/546 (54.21%), Query Frame = 0
Query: 77 EIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQSSSIYSILLRIFVQNES 136
E+++ + ++HE + VL+ L+ P A FF W SS Y+ +LRIF N
Sbjct: 100 ELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGL 159
Query: 137 MKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQ 196
+ +FW + MK++G + + K+ D L + +N++D V
Sbjct: 160 VDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCN 219
Query: 197 KVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDH 256
+V IV+ W +DV +L +L + + V VL++L P KA FF W+ + H
Sbjct: 220 RVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKH 279
Query: 257 NTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVKLY 316
+ T+NA+ARVLG++ ++ F +IE++++A +E++++TYV++S +F + KM+ +AV+L+
Sbjct: 280 DEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELF 339
Query: 317 ELMMDGPYK--PSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHRS 376
E M G P+ CS+LL+ I ++ D+ L R K + G + + + +S
Sbjct: 340 EFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKS 399
Query: 377 LTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPD 436
L S +F ++ ++K+M GY P S + GL + + +EA ++++ MEA G D
Sbjct: 400 LRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLD 459
Query: 437 IKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD-LLDVLISGFLGQKKLDGAYQLL 496
K L++GHC A +L+ A CF KMI K A + L+ + + Y+L
Sbjct: 460 DKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLF 519
Query: 497 IELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEAIALLSLMKKQNYPPFSEPFVQYI 556
ELV + ++PW +TYK ++ LL + EEA++LL +M+ +PPF +PF+ Y+
Sbjct: 520 SELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYL 579
Query: 557 SKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHSEI 615
S GT +A FLK +++K++PS S L +F + R+SEA+DLL P +IR+++E+
Sbjct: 580 SNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEV 639
BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match:
Q8LPF1 (Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15980 PE=2 SV=1)
HSP 1 Score: 298.5 bits (763), Expect = 1.8e-79
Identity = 165/569 (29.00%), Postives = 302/569 (53.08%), Query Frame = 0
Query: 55 SSKPHSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGK 114
SS +++++ + + E+E+ ++ + + VL++L+ P A FF W
Sbjct: 84 SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143
Query: 115 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAAD 174
+ SS Y+++LRI N + +FW + VMK++G L + ++ +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203
Query: 175 ATALTHFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKEL 234
L + +N+ ++V +V IV+ +W DV ++ +L V + V +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263
Query: 235 RNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDID 294
P KA FF W+ + H+ T+NA+ARVLG++ ++ F ++ +M++A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323
Query: 295 TYVKISRQFQRNKMVGDAVKLYELMMDG---PYKPSLQDCSVLLRTIAASENPDLSLVFR 354
TYV++S +F + K++ +AV L+E+ M G P+ +LL+ I ++ D+ L R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383
Query: 355 VTKKFEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLC 414
K + G +L+ ++ + +SL S + ++ ++K M+ GY P S + L
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443
Query: 415 KARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD 474
+ + +EA + +D ME+ G D K L++G+C + LD ALVCF KM+ AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503
Query: 475 L-LDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEA 534
+ L+ + + ++ AY+LL V+K ++P +TYK L+ LL + EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563
Query: 535 IALLSLMKKQNYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNE 594
++LL +MK +PPF +PF+ Y S G +A FLK +++ +P IS L +F +
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623
Query: 595 GRYSEAKDLLFKCPHHIRKHSEICKLFGS 615
R+SEA+DLL CP++IR + ++ +LF +
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNT 652
BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match:
Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)
HSP 1 Score: 137.9 bits (346), Expect = 4.0e-31
Identity = 94/386 (24.35%), Postives = 176/386 (45.60%), Query Frame = 0
Query: 215 LEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSI 274
L E GV L + RVL ++ + FF W +P Y H+ + ++ ++L +
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQF 163
Query: 275 EAFWGVIEQMKNANHE-IDIDTYVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSV 334
A WG+IE+M+ N + I+ + +V + ++F MV A+++ + M ++P
Sbjct: 164 GAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGC 223
Query: 335 LLRTIAASENPDLSLVFRVTKKFE--ATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSM 394
LL + + V K FE + ++ + + GK EA+ ++ M
Sbjct: 224 LLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 283
Query: 395 RSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANEL 454
AG+EPD V Y+ L+ G A ++ +A +L +M +G P+ +T+LIQ C + +
Sbjct: 284 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 343
Query: 455 DNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQ 514
+ A+ F +M C+ D L+SGF K+D Y +L +++ K + P + TY
Sbjct: 344 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMH 403
Query: 515 LIEKLLEVRKLEEAIALLSLMKKQNYPP---FSEPFVQYISKFGTVEDATDFLKVLSTKE 574
++ + EE + L+ M++ Y P ++ K G V++A +
Sbjct: 404 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 463
Query: 575 Y-PSISAYLHIFNSFFNEGRYSEAKD 594
P + ++ + N ++G EA D
Sbjct: 464 LSPGVDTFVIMINGLASQGCLLEASD 483
BLAST of CcUC06G127390 vs. ExPASy Swiss-Prot
Match:
Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 7.5e-30
Identity = 97/402 (24.13%), Postives = 189/402 (47.01%), Query Frame = 0
Query: 195 VQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDY 254
V KV++ + D + + L+E+ + LS + ++ VL+ R++ AF FF W R +
Sbjct: 134 VCKVIDELFALDRNMEAV--LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193
Query: 255 DHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVK 314
H++ T+N++ +L + E V+E+M + ++T+ + F K AV
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253
Query: 315 LYELMMDGPYKPSLQDCSVLLRTIA-ASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHR 374
++ELM +K ++ + LL ++ A + ++F K+ ++ + Y +
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313
Query: 375 SLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIP 434
EA I M G +PD V ++ ++ GL ++R+ +A K+ M+++G P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373
Query: 435 DIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLL 494
+++++TI+I+ C + ++ A+ F M++ PDA + LI+GF QKKLD Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433
Query: 495 IELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPFSEPFVQYISKFGT 554
E+ K H P TY LI+ + + E A + + M + P F + +
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493
Query: 555 VED----ATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEA 592
+ + +++ P ++Y + EG+ EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match:
A0A6J1F5I7 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441023 PE=3 SV=1)
HSP 1 Score: 1116.3 bits (2886), Expect = 0.0e+00
Identity = 557/635 (87.72%), Postives = 597/635 (94.02%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
M RR AI TSL LANS +STRS Y QVTRF P SS+SHQS FP F +NHRILFFSSKPHS
Sbjct: 1 MARRKAILTSLTLANSLYSTRSCYSQVTRFLP-SSLSHQSRFPPFTTNHRILFFSSKPHS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LLELVLANDWSE LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFF+WACGKNG TQS
Sbjct: 61 LLELVLANDWSETLETELETLNPTLTHETMVYVLKRLDKEPQKASDFFDWACGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
S IYSILLRI VQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIVVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIRVLKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRVLKELRNFPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
SFFHWVGCRPDYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRPDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQR+KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRSKMMGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKA+YDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
+VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LL LMKKQNYPPF
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLRLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLH+FNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHVFNSFFNEGRHSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESK---TNSATQSSSNSIGT 633
HIRKHSEICKLFGSAESK T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTTTTTTQSSPNPIGT 634
BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match:
A0A0A0LNT7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1)
HSP 1 Score: 1115.9 bits (2885), Expect = 0.0e+00
Identity = 556/632 (87.97%), Postives = 597/632 (94.46%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
MTRR+AIFTSLRLANSFFSTRS YPQVTRFSPSS VSHQS F NH +LFFSS P S
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLVSHFTINHPVLFFSSNPQS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LL+LV NDWSEMLETE+ETLNPTLTHETVVYVLKRLDKQPQKAS+FFNWA GKNG TQS
Sbjct: 61 LLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWASGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
SSIYS+LLRIFVQNESMK FWITLR+MKE+GFYLDEETY TILGVL+++KKAADAT LTH
Sbjct: 121 SSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKAADATGLTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQ+NAMDSVVQKVV+IVLGSDWS+DV GKLEELG+ALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLKELRNSPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
A SFFHWVGCRPDYDHNTV++NAIARVLG+DDSIEAFWGVIE+MK+ANHEIDIDTY+KIS
Sbjct: 241 ALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQ++KM+G+AVKLYELMMDGPYKPSLQDCSVLLRTIAAS+NPDLSLV+RV KKFEATG
Sbjct: 301 RQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKA+YDGIHRSLTS GKF++AENI+KSMR+AGYEPDNVTYSQLVFGLCKARRLEEA
Sbjct: 361 YSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCKARRLEEAR 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
KVLDEMEAQGCIPDIKTWTILIQGHC ANELD ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 KVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
L QKKL+GAYQLLIEL +KAHVRPWQATYKQLI+ LLEVRKLEEAIALL LMKKQNYPPF
Sbjct: 481 LNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTV+DA DFLKVLS+KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESKTNSATQSSSNSIGT 633
HIRKH+E+CKLFGSAES T +ATQSSSN I T
Sbjct: 601 HIRKHNEVCKLFGSAESNTTAATQSSSNPIET 632
BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match:
A0A6J1I0W9 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468041 PE=4 SV=1)
HSP 1 Score: 1113.6 bits (2879), Expect = 0.0e+00
Identity = 557/637 (87.44%), Postives = 595/637 (93.41%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
M RR AI TSL L NS FSTRS Y QVTRF P SS+SHQS FP F +NHRILFFSSKPHS
Sbjct: 1 MARRKAILTSLMLENSLFSTRSSYSQVTRFLP-SSLSHQSRFPPFTTNHRILFFSSKPHS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LLELVLANDWSE+LETE+ETLNPTLTHET+VYVLKRLDK+PQKASDFFNWACGKNG TQS
Sbjct: 61 LLELVLANDWSEILETELETLNPTLTHETMVYVLKRLDKEPQKASDFFNWACGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
S IYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLTILGVLKRAKKAADATALTH
Sbjct: 121 SPIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTILGVLKRAKKAADATALTH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQENAMDSVVQKVVNIVL S+W++DVA KLE LG+ LSD+FVIR LKELRN PLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVNIVLRSEWNNDVAEKLEGLGIVLSDSFVIRALKELRNFPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
SFFHWVGCR DYDHNTVT+NAIARVLG+DDSIEAFWG++E+MKNA HEIDIDTY+KIS
Sbjct: 241 GLSFFHWVGCRSDYDHNTVTYNAIARVLGRDDSIEAFWGLVEEMKNAGHEIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQR KM+GDAVKLYELMMDGPYKPSLQDCSVLLR+I+AS+NPDLSLVFRV KKFEATG
Sbjct: 301 RQFQRTKMIGDAVKLYELMMDGPYKPSLQDCSVLLRSISASDNPDLSLVFRVAKKFEATG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKA+YDGIHRSLTSAGKF+EAENI+KS+R+AGYEPDNVTYSQLVFGLCKARRLEEAC
Sbjct: 361 YSLSKAVYDGIHRSLTSAGKFDEAENIVKSLRNAGYEPDNVTYSQLVFGLCKARRLEEAC 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
+VLDEMEAQGC+PDIKTWTILIQGHCTANE+D ALVCFAKMIEKNCDPDADLLDVLISGF
Sbjct: 421 EVLDEMEAQGCVPDIKTWTILIQGHCTANEVDKALVCFAKMIEKNCDPDADLLDVLISGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
LGQKKLDGAYQLLIELV+KAH+RPWQATYK LIEKLLEVRKLEEAI+LLSLMKKQNYPP
Sbjct: 481 LGQKKLDGAYQLLIELVNKAHLRPWQATYKHLIEKLLEVRKLEEAISLLSLMKKQNYPPS 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTVEDA +FLK LS+KEYPS+SAYLHIFNSFFNEGR+SEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVEDAAEFLKALSSKEYPSMSAYLHIFNSFFNEGRHSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESK-----TNSATQSSSNSIGT 633
HIRKHSEICKLFGSAESK T + TQSS N IGT
Sbjct: 601 HIRKHSEICKLFGSAESKSTTTTTTTTTQSSPNPIGT 636
BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match:
A0A6J1C114 (pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007295 PE=4 SV=1)
HSP 1 Score: 1108.2 bits (2865), Expect = 0.0e+00
Identity = 550/635 (86.61%), Postives = 597/635 (94.02%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFF-----STRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFS 60
MTRR+AI TSLRLANSF STRSLYPQVTRFSP +SVSH+SHF F+S H +LFFS
Sbjct: 1 MTRRTAILTSLRLANSFLSAQISSTRSLYPQVTRFSP-TSVSHRSHFLDFKSTHPLLFFS 60
Query: 61 SKPHSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKN 120
SKPHSLL+ VLANDWS+ LE E+ETLNPTLTHETVVYVLKRLDK+PQKAS FFNWACGKN
Sbjct: 61 SKPHSLLQFVLANDWSQDLENELETLNPTLTHETVVYVLKRLDKEPQKASGFFNWACGKN 120
Query: 121 GFTQSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADA 180
GFTQSSSIYSILLRIFVQNESMKQFWITLRVMKE+GFYLDEETYLT+LG+L+RAKKAADA
Sbjct: 121 GFTQSSSIYSILLRIFVQNESMKQFWITLRVMKERGFYLDEETYLTMLGILRRAKKAADA 180
Query: 181 TALTHFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELR 240
TALTHFYNRMLQENAMDSVVQKVVNIVLGS+WSSDVA LE LG+ LSDNFVIR LKELR
Sbjct: 181 TALTHFYNRMLQENAMDSVVQKVVNIVLGSEWSSDVAENLEGLGIVLSDNFVIRALKELR 240
Query: 241 NSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDT 300
N PLKA SFFHWVGCR D+DHNTVT+NAIARVLG+DDSIEAFWGV+++MKNA HEIDIDT
Sbjct: 241 NFPLKALSFFHWVGCRLDFDHNTVTYNAIARVLGRDDSIEAFWGVVDEMKNAGHEIDIDT 300
Query: 301 YVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKK 360
Y+KISRQFQR+KM+G+AVKLYELMMDGPY+PSLQDCSVLLR+I+AS+NPDLSLVFRV KK
Sbjct: 301 YIKISRQFQRSKMMGEAVKLYELMMDGPYRPSLQDCSVLLRSISASDNPDLSLVFRVAKK 360
Query: 361 FEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARR 420
+EATGYSLSKAIYDGIHRSLTSAGKF+EAENI+KSMR+AGYEPDNVTYSQLVFGLCKARR
Sbjct: 361 YEATGYSLSKAIYDGIHRSLTSAGKFDEAENIVKSMRNAGYEPDNVTYSQLVFGLCKARR 420
Query: 421 LEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDV 480
LEEACK+LDEMEA+GCIPDIKTWTILIQGHCT NE+D ALVCFAKMIE+NCDPDADLLDV
Sbjct: 421 LEEACKLLDEMEAEGCIPDIKTWTILIQGHCTTNEVDKALVCFAKMIERNCDPDADLLDV 480
Query: 481 LISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQ 540
LI GFLGQ+KLDGAYQLLIELV+KAH+RPWQATYKQLIEKLLEVRKLEEAI LL LMKKQ
Sbjct: 481 LIDGFLGQRKLDGAYQLLIELVNKAHLRPWQATYKQLIEKLLEVRKLEEAITLLRLMKKQ 540
Query: 541 NYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLL 600
NYPPFSEPFV YISKFGTVEDA DFLKVLS+KEYPS+SAYLH+FNSFFNEGR SEAKDLL
Sbjct: 541 NYPPFSEPFVLYISKFGTVEDAADFLKVLSSKEYPSVSAYLHVFNSFFNEGRCSEAKDLL 600
Query: 601 FKCPHHIRKHSEICKLFGSAESKTNSATQSSSNSI 631
FKCPHHIRKHSE+CKLFGSAESK+ AT+SSS +
Sbjct: 601 FKCPHHIRKHSEVCKLFGSAESKSTDATKSSSKPL 634
BLAST of CcUC06G127390 vs. ExPASy TrEMBL
Match:
A0A5D3BGX0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001060 PE=4 SV=1)
HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 546/623 (87.64%), Postives = 592/623 (95.02%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILFFSSKPHS 60
MTRR+AIFTSLRLANSFFSTRS YPQVTRFSPSS VSHQS PLFR NH +LFFSS PHS
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSRYPQVTRFSPSSYVSHQSLIPLFRINHPVLFFSSNPHS 60
Query: 61 LLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQS 120
LLELV NDWSEMLETE+ETLNPTLTHETVVYVLKRLDKQPQKASDFFNWA GKNG TQS
Sbjct: 61 LLELVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASDFFNWASGKNGSTQS 120
Query: 121 SSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTH 180
SSIYSILLRIFVQNESMK FWITLR+MKE+GFYLDEETYLTILGVL++AKKAADATAL H
Sbjct: 121 SSIYSILLRIFVQNESMKLFWITLRLMKERGFYLDEETYLTILGVLRKAKKAADATALAH 180
Query: 181 FYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLK 240
FYNRMLQENAMDSVVQKVV+IVLGSDWS+DVAGKLEELG+ALSDNFVIRVLKELRNSPLK
Sbjct: 181 FYNRMLQENAMDSVVQKVVHIVLGSDWSNDVAGKLEELGIALSDNFVIRVLKELRNSPLK 240
Query: 241 AFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKIS 300
A SFF+WVGCRPDYDHNTV++NAIARVL ++DSI+AFWGVIE+MKNA+ +IDIDTY+KIS
Sbjct: 241 ALSFFNWVGCRPDYDHNTVSYNAIARVLARNDSIKAFWGVIEEMKNASLDIDIDTYIKIS 300
Query: 301 RQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATG 360
RQFQ++KM+GDAVKLYELMMDGPYKPSL DCS+LLRTIAAS+NPDLSLV+RV KKFEA+G
Sbjct: 301 RQFQKSKMMGDAVKLYELMMDGPYKPSLPDCSILLRTIAASDNPDLSLVYRVAKKFEASG 360
Query: 361 YSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEAC 420
YSLSKAIYDGIHRSLTS GKF++AE+I+KSMR+AGYEPDNVT+SQLVFGLCKARRL+EA
Sbjct: 361 YSLSKAIYDGIHRSLTSRGKFDDAEDIVKSMRNAGYEPDNVTFSQLVFGLCKARRLKEAR 420
Query: 421 KVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGF 480
+VLDEMEAQGCIPDIKTWT+LIQGHC AN+LD ALVCFAKMIEKNCDPDADLLDVLI+GF
Sbjct: 421 EVLDEMEAQGCIPDIKTWTVLIQGHCNANKLDVALVCFAKMIEKNCDPDADLLDVLINGF 480
Query: 481 LGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPF 540
L QKKLDGAYQLLIEL +KAHVRPWQATYK LI+ LLEVRKLEEA+ALL LMKKQNYPPF
Sbjct: 481 LSQKKLDGAYQLLIELTNKAHVRPWQATYKHLIKNLLEVRKLEEAMALLRLMKKQNYPPF 540
Query: 541 SEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
EPFVQYISKFGTV+DA DFLKVLS+KEYPS+SAYLHIFNSFFNEGRYSEAKDLLFKCPH
Sbjct: 541 PEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAKDLLFKCPH 600
Query: 601 HIRKHSEICKLFGSAESKTNSAT 624
HIRKH+E+CKLFGSAESKT AT
Sbjct: 601 HIRKHNEVCKLFGSAESKTTGAT 623
BLAST of CcUC06G127390 vs. TAIR 10
Match:
AT3G48250.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 711.8 bits (1836), Expect = 4.8e-205
Identity = 355/620 (57.26%), Postives = 462/620 (74.52%), Query Frame = 0
Query: 1 MTRRSAIFTSLRLANSFFSTRSLYPQVTRFSPSSSVSHQSHFPLFRSNHRILF--FSSKP 60
M R AI +SLR A S STRS + S+ S F + S F FSSKP
Sbjct: 1 MYRSMAILSSLRHAYSQISTRSYLSRSKVGFSSNLSSPLDSFAIVPSRFLWKFRTFSSKP 60
Query: 61 HSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFT 120
S+L+LVL NDWS+ +E + + +LTHET +YVL++L+K P+KA F +W +G +
Sbjct: 61 DSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFLDWVLRDSGLS 120
Query: 121 QSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATAL 180
S+ +YSI+LRI VQ SMK+FW+TLR MK+ GFYLDE+TY TI G L + K ADA A+
Sbjct: 121 PSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSKEKSKADAVAV 180
Query: 181 THFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSP 240
HFY RML+ENAM V +V +V DWS +V +L+E+ + LSDNFVIRVLKELR P
Sbjct: 181 AHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVIRVLKELREHP 240
Query: 241 LKAFSFFHWV---GCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDT 300
LKA +FFHWV G Y H+TVT+NA RVL + +S+ FW V+++MK A +++D+DT
Sbjct: 241 LKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDT 300
Query: 301 YVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSVLLRTIAASENPDLSLVFRVTKK 360
Y+K+SRQFQ+++M+ + VKLYE MMDGP+KPS+QDCS+LLR ++ S NPDL LVFRV++K
Sbjct: 301 YIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRK 360
Query: 361 FEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARR 420
+E+TG SLSKA+YDGIHRSLTS G+F+EAE I K+MR+AGYEPDN+TYSQLVFGLCKA+R
Sbjct: 361 YESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKR 420
Query: 421 LEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDV 480
LEEA VLD+MEAQGC PDIKTWTILIQGHC NELD AL CFA M+EK D D++LLDV
Sbjct: 421 LEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDV 480
Query: 481 LISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQ 540
LI GF+ K +GA L+E+V A+V+PWQ+TYK LI+KLL+++K EEA+ LL +MKKQ
Sbjct: 481 LIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQ 540
Query: 541 NYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLL 600
NYP ++E F Y++KFGT+EDA FL VLS+K+ PS +AY H+ +F+ EGR ++AK+LL
Sbjct: 541 NYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Query: 601 FKCPHHIRKHSEICKLFGSA 616
F CPHH + H +I +LFG+A
Sbjct: 601 FICPHHFKTHPKISELFGAA 620
BLAST of CcUC06G127390 vs. TAIR 10
Match:
AT3G02490.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 307.4 bits (786), Expect = 2.7e-83
Identity = 171/546 (31.32%), Postives = 296/546 (54.21%), Query Frame = 0
Query: 77 EIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGKNGFTQSSSIYSILLRIFVQNES 136
E+++ + ++HE + VL+ L+ P A FF W SS Y+ +LRIF N
Sbjct: 100 ELDSNDVVISHELALRVLRELESSPDVAGRFFKWGLEAYPQKLSSKSYNTMLRIFGVNGL 159
Query: 137 MKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAADATALTHFYNRMLQENAMDSVVQ 196
+ +FW + MK++G + + K+ D L + +N++D V
Sbjct: 160 VDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGLENDLERLKELFASGSMDNSVDKVCN 219
Query: 197 KVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDH 256
+V IV+ W +DV +L +L + + V VL++L P KA FF W+ + H
Sbjct: 220 RVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVLEKLDVDPRKALLFFRWIDESGSFKH 279
Query: 257 NTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVKLY 316
+ T+NA+ARVLG++ ++ F +IE++++A +E++++TYV++S +F + KM+ +AV+L+
Sbjct: 280 DEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEMEMETYVRVSARFCQTKMIKEAVELF 339
Query: 317 ELMMDGPYK--PSLQDCSVLLRTIAASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHRS 376
E M G P+ CS+LL+ I ++ D+ L R K + G + + + +S
Sbjct: 340 EFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLFTRTLKAYTGNGNVVPDVMLQHVLKS 399
Query: 377 LTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPD 436
L S +F ++ ++K+M GY P S + GL + + +EA ++++ MEA G D
Sbjct: 400 LRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGNHLD 459
Query: 437 IKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD-LLDVLISGFLGQKKLDGAYQLL 496
K L++GHC A +L+ A CF KMI K A + L+ + + Y+L
Sbjct: 460 DKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVYKLF 519
Query: 497 IELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEAIALLSLMKKQNYPPFSEPFVQYI 556
ELV + ++PW +TYK ++ LL + EEA++LL +M+ +PPF +PF+ Y+
Sbjct: 520 SELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMRNHGFPPFVDPFMDYL 579
Query: 557 SKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEAKDLLFKCPHHIRKHSEI 615
S GT +A FLK +++K++PS S L +F + R+SEA+DLL P +IR+++E+
Sbjct: 580 SNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRNAEV 639
BLAST of CcUC06G127390 vs. TAIR 10
Match:
AT5G15980.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 298.5 bits (763), Expect = 1.3e-80
Identity = 165/569 (29.00%), Postives = 302/569 (53.08%), Query Frame = 0
Query: 55 SSKPHSLLELVLANDWSEMLETEIETLNPTLTHETVVYVLKRLDKQPQKASDFFNWACGK 114
SS +++++ + + E+E+ ++ + + VL++L+ P A FF W
Sbjct: 84 SSAEATVIDIFSRLSGEDEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEA 143
Query: 115 NGFTQSSSIYSILLRIFVQNESMKQFWITLRVMKEQGFYLDEETYLTILGVLKRAKKAAD 174
+ SS Y+++LRI N + +FW + VMK++G L + ++ +D
Sbjct: 144 SPEELSSKNYNMMLRILGGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESD 203
Query: 175 ATALTHFYNRMLQENAMDSVVQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKEL 234
L + +N+ ++V +V IV+ +W DV ++ +L V + V +++ L
Sbjct: 204 LLRLRKLFTSDCLDNSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERL 263
Query: 235 RNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDID 294
P KA FF W+ + H+ T+NA+ARVLG++ ++ F ++ +M++A +E++I+
Sbjct: 264 DVEPRKALLFFRWIDESDLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIE 323
Query: 295 TYVKISRQFQRNKMVGDAVKLYELMMDG---PYKPSLQDCSVLLRTIAASENPDLSLVFR 354
TYV++S +F + K++ +AV L+E+ M G P+ +LL+ I ++ D+ L R
Sbjct: 324 TYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSR 383
Query: 355 VTKKFEATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLC 414
K + G +L+ ++ + +SL S + ++ ++K M+ GY P S + L
Sbjct: 384 AVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLS 443
Query: 415 KARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDAD 474
+ + +EA + +D ME+ G D K L++G+C + LD ALVCF KM+ AD
Sbjct: 444 RKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYAD 503
Query: 475 L-LDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQLIEKLLEVR-----KLEEA 534
+ L+ + + ++ AY+LL V+K ++P +TYK L+ LL + EEA
Sbjct: 504 YSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEA 563
Query: 535 IALLSLMKKQNYPPFSEPFVQYISKFGTVEDATDFLKVLSTKEYPSISAYLHIFNSFFNE 594
++LL +MK +PPF +PF+ Y S G +A FLK +++ +P IS L +F +
Sbjct: 564 LSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKS 623
Query: 595 GRYSEAKDLLFKCPHHIRKHSEICKLFGS 615
R+SEA+DLL CP++IR + ++ +LF +
Sbjct: 624 ARHSEAQDLLSLCPNYIRNNPDVLELFNT 652
BLAST of CcUC06G127390 vs. TAIR 10
Match:
AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 137.9 bits (346), Expect = 2.8e-32
Identity = 94/386 (24.35%), Postives = 176/386 (45.60%), Query Frame = 0
Query: 215 LEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDYDHNTVTFNAIARVLGQDDSI 274
L E GV L + RVL ++ + FF W +P Y H+ + ++ ++L +
Sbjct: 104 LNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQF 163
Query: 275 EAFWGVIEQMKNANHE-IDIDTYVKISRQFQRNKMVGDAVKLYELMMDGPYKPSLQDCSV 334
A WG+IE+M+ N + I+ + +V + ++F MV A+++ + M ++P
Sbjct: 164 GAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGC 223
Query: 335 LLRTIAASENPDLSLVFRVTKKFE--ATGYSLSKAIYDGIHRSLTSAGKFNEAENIIKSM 394
LL + + V K FE + ++ + + GK EA+ ++ M
Sbjct: 224 LLDALCKHGS-----VKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 283
Query: 395 RSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIPDIKTWTILIQGHCTANEL 454
AG+EPD V Y+ L+ G A ++ +A +L +M +G P+ +T+LIQ C + +
Sbjct: 284 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 343
Query: 455 DNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLLIELVSKAHVRPWQATYKQ 514
+ A+ F +M C+ D L+SGF K+D Y +L +++ K + P + TY
Sbjct: 344 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKG-LMPSELTYMH 403
Query: 515 LIEKLLEVRKLEEAIALLSLMKKQNYPP---FSEPFVQYISKFGTVEDATDFLKVLSTKE 574
++ + EE + L+ M++ Y P ++ K G V++A +
Sbjct: 404 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENG 463
Query: 575 Y-PSISAYLHIFNSFFNEGRYSEAKD 594
P + ++ + N ++G EA D
Sbjct: 464 LSPGVDTFVIMINGLASQGCLLEASD 483
BLAST of CcUC06G127390 vs. TAIR 10
Match:
AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 133.7 bits (335), Expect = 5.4e-31
Identity = 97/402 (24.13%), Postives = 189/402 (47.01%), Query Frame = 0
Query: 195 VQKVVNIVLGSDWSSDVAGKLEELGVALSDNFVIRVLKELRNSPLKAFSFFHWVGCRPDY 254
V KV++ + D + + L+E+ + LS + ++ VL+ R++ AF FF W R +
Sbjct: 134 VCKVIDELFALDRNMEAV--LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGF 193
Query: 255 DHNTVTFNAIARVLGQDDSIEAFWGVIEQMKNANHEIDIDTYVKISRQFQRNKMVGDAVK 314
H++ T+N++ +L + E V+E+M + ++T+ + F K AV
Sbjct: 194 AHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVG 253
Query: 315 LYELMMDGPYKPSLQDCSVLLRTIA-ASENPDLSLVFRVTKKFEATGYSLSKAIYDGIHR 374
++ELM +K ++ + LL ++ A + ++F K+ ++ + Y +
Sbjct: 254 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKE----RFTPNMMTYTVLLN 313
Query: 375 SLTSAGKFNEAENIIKSMRSAGYEPDNVTYSQLVFGLCKARRLEEACKVLDEMEAQGCIP 434
EA I M G +PD V ++ ++ GL ++R+ +A K+ M+++G P
Sbjct: 314 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 373
Query: 435 DIKTWTILIQGHCTANELDNALVCFAKMIEKNCDPDADLLDVLISGFLGQKKLDGAYQLL 494
+++++TI+I+ C + ++ A+ F M++ PDA + LI+GF QKKLD Y+LL
Sbjct: 374 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 433
Query: 495 IELVSKAHVRPWQATYKQLIEKLLEVRKLEEAIALLSLMKKQNYPPFSEPFVQYISKFGT 554
E+ K H P TY LI+ + + E A + + M + P F + +
Sbjct: 434 KEMQEKGH-PPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 493
Query: 555 VED----ATDFLKVLSTKEYPSISAYLHIFNSFFNEGRYSEA 592
+ + +++ P ++Y + EG+ EA
Sbjct: 494 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREA 527
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038880639.1 | 0.0e+00 | 90.82 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Benincasa ... | [more] |
XP_023530746.1 | 0.0e+00 | 87.62 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... | [more] |
XP_022933685.1 | 0.0e+00 | 87.72 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucurbita ... | [more] |
XP_004138087.1 | 0.0e+00 | 87.97 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Cucumis sa... | [more] |
KAG6587441.1 | 0.0e+00 | 87.42 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q9STK5 | 6.7e-204 | 57.26 | Pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Arabidop... | [more] |
Q9M891 | 3.8e-82 | 31.32 | Pentatricopeptide repeat-containing protein At3g02490, mitochondrial OS=Arabidop... | [more] |
Q8LPF1 | 1.8e-79 | 29.00 | Pentatricopeptide repeat-containing protein At5g15980, mitochondrial OS=Arabidop... | [more] |
Q9FH87 | 4.0e-31 | 24.35 | Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... | [more] |
Q9LZP3 | 7.5e-30 | 24.13 | Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1F5I7 | 0.0e+00 | 87.72 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... | [more] |
A0A0A0LNT7 | 0.0e+00 | 87.97 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G003530 PE=4 SV=1 | [more] |
A0A6J1I0W9 | 0.0e+00 | 87.44 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Cucurbit... | [more] |
A0A6J1C114 | 0.0e+00 | 86.61 | pentatricopeptide repeat-containing protein At3g48250, chloroplastic OS=Momordic... | [more] |
A0A5D3BGX0 | 0.0e+00 | 87.64 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT3G48250.1 | 4.8e-205 | 57.26 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G02490.1 | 2.7e-83 | 31.32 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G15980.1 | 1.3e-80 | 29.00 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G65820.1 | 2.8e-32 | 24.35 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G62470.1 | 5.4e-31 | 24.13 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |