CcUC06G126610 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G126610
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, putative
Location	CicolChr06: 28889714 .. 28891798 (-)
RNA-Seq Expression	CcUC06G126610
Synteny	CcUC06G126610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGAAACGGCTCTTACGATTGGGCGGACCAGTGGGACTACAACGACTCCACGGACATAGCCACAGAGAACAAGAAGAAGACCGGCGGCGGAAATAGTACGGCCAAATACAAGCAGAAAGTCGGCGAAGGGCTTGGGAAGACCAAAGCTGTCGCCTCTAATGGCGTCAAAAAGGTTAAAGAAGGAACCTCTCTTGGCTTCCAATGGATTAAAGATAAATATAACAAAACCGCTCATAAGAAGTAGAATTCCTTCCTTCATCGAATTCATCCTTTTTTCTCTGTACCTCTCTGCTCTTTTCTTTTTCTGTTGGATATATAGATACATGTAGACCATAGATTATTCTTTTGTTAATATAATTTCATTTGATCTCTGTTTTCTCTTTCGGTTTTCCTCTCGTTTTGATTCCGGTTTTGTTTTACAATTTGATTCTTGATTTTCAGTTCTCTGTTTATCAGTTTTTGTTGAAATTTTCGCTTCAGCAACATGTATAAACCTTGTTAGGGCAAAAAAATTCTGGGGAAATTGATATACGAAGATGAAAGGTGAAGGTGGAGATCTCGCCATCTAATTTTGAAAATGTTACTTTTATTTATGGGAAAATAAAATTAATTTTGACCGAGAAATTCAATTTGGACCTTCAACTTTGCTAATTCTTTTTTATTGATTCGATTTTCGTTAATTTATTCGCTAATAAATCTTCATGAAACTCATCGATTTCAATAATATAAAGTTATCTGATGTCATTTTTCTCCAATATTTTATCAATTTTATATCGTAGATATAATATTTTAAACAATATTTGAAACCAAAAATTATAAGTTTTAAAGTGAAAACGAATACCATATGAATCAAAATTAAATTTCTATTTCTTTACATTTTTGTTAGTTCAATATTTTAGAGTGGAAAATGAGATCGTAATTATTGACTTCTCTAATTTAATGAGCATGTTTGAATGAACTAATTATTCTAAAGACTACCAATAACGAAATGAAAGGAGTTAGTAAAATGTATTGATATTGATATAATTTAGGAATTAATAGTGATACAGTTCAATAATTTAAAATTTGAACTTTTATGTCTATCAATTTACATTATTCATTACTTATAATTGGATAAACATCGTATAAGATTTATAATTTTATCAATTAAGTTTCTAAATTTTATTTATAATTGGATAAACATCGTATAAGATTTATAATTTTATCAATTAAGTTTCTAATTTTATGGATCAAATTTTAAATTATCTATTTTATTAATCTAATATTTGAATAACCTTTGAAGAAGTGTACTCACGTCTAAAAATAATTCTAATAAAGTCTAAATTGAATCATTTGTAACAATAATTTAAAAGTATAATTGAAATAATTATATTTTCACACTATATTAAACTAAGTCGTGTTAATTGATACATTTACAAAATTTCTTTAATTATGGTAATTAGATTTCCTAATCAAAATTATACTCCACCGTTTGAAACTCTCTATGATGTGAAGTAAGATTAATTAAGTAATAATTAACATATACTTTCTTCTTCAAAATTGGAGGTTAAACTTTTCTATCCTCTAATTGTCATACTTAAATCTAGTAGAATCAATTATAGAAATGTGCATTCGCACAATTTTTAAAATTAGCTAAATGTTGGTTCTTAACAAAATTTCAAATTTCAAATTATCACTGGTTTTTGTACATAAAATTTATTTCTCTCAAAACCAAACTTTACAACCTAATTTTTCAAATCATATATTCTTTTTATTACAACTCTTATACTTTAGAGCAAACTAAATATAATCTAAATTGAAAGTATATAAATTCTTTAAAAGGATTTTAAAAATTATAAATCTGCGAAATATATATATATGTTACGCAAAAAAAAAAAAAAAAAAAATTAATAACATGTTTGCCTTAAAATATAATTCTTTTTTATATAAAATAGAAATAAAACAGAAATGTGTTTTTTTTTTTTCTTGTATAAAAAATATTATAATTAAACAGGCTAGTGGATCCTCCCTCAGCTGTGGTTTGGGCCGGCAGCCCAAAATTGGTGCACATATTCAAAAAGAAATTAAAGAAACGATCTAA

mRNA sequence

ATGGCTGGAAACGGCTCTTACGATTGGGCGGACCAGTGGGACTACAACGACTCCACGGACATAGCCACAGAGAACAAGAAGAAGACCGGCGGCGGAAATAGTACGGCCAAATACAAGCAGAAAGTCGGCGAAGGGCTTGGGAAGACCAAAGCTGTCGCCTCTAATGGCGTCAAAAAGGTTAAAGAAGGAACCTCTCTTGGCTTCCAATGGATTAAAGATAAATATAACAAAACCGCTCATAAGAAATACATAGTGGAAAATGAGATCGCTAGTGGATCCTCCCTCAGCTGTGGTTTGGGCCGGCAGCCCAAAATTGGTGCACATATTCAAAAAGAAATTAAAGAAACGATCTAA

Coding sequence (CDS)

ATGGCTGGAAACGGCTCTTACGATTGGGCGGACCAGTGGGACTACAACGACTCCACGGACATAGCCACAGAGAACAAGAAGAAGACCGGCGGCGGAAATAGTACGGCCAAATACAAGCAGAAAGTCGGCGAAGGGCTTGGGAAGACCAAAGCTGTCGCCTCTAATGGCGTCAAAAAGGTTAAAGAAGGAACCTCTCTTGGCTTCCAATGGATTAAAGATAAATATAACAAAACCGCTCATAAGAAATACATAGTGGAAAATGAGATCGCTAGTGGATCCTCCCTCAGCTGTGGTTTGGGCCGGCAGCCCAAAATTGGTGCACATATTCAAAAAGAAATTAAAGAAACGATCTAA

Protein sequence

MAGNGSYDWADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKVKEGTSLGFQWIKDKYNKTAHKKYIVENEIASGSSLSCGLGRQPKIGAHIQKEIKETI

Homology

[Close]

BLAST of CcUC06G126610 vs. NCBI nr
Match: XP_038879790.1 (uncharacterized protein LOC120071534 [Benincasa hispida])

HSP 1 Score: 161.0 bits (406), Expect = 6.2e-36
Identity = 77/82 (93.90%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MAGNGSYDWADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKV 60
          MA NGSYDWADQWDYNDSTD+ TENKKK+GGGNSTAKYKQKVGEGLGKTKAVASNGVK+V
Sbjct: 1  MAANGSYDWADQWDYNDSTDVVTENKKKSGGGNSTAKYKQKVGEGLGKTKAVASNGVKRV 60

Query: 61 KEGTSLGFQWIKDKYNKTAHKK 83
          KEGTSLGFQWIKDKYNKTAHKK
Sbjct: 61 KEGTSLGFQWIKDKYNKTAHKK 82

[Close]

BLAST of CcUC06G126610 vs. NCBI nr
Match: XP_023516550.1 (uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 155.6 bits (392), Expect = 2.6e-34
Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1   MAGNGSYDWADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKV 60
           MAG+GSYDWADQWDY+DS D+ TENKKK+GGGN+T KYKQKVGEGLGKTKAVASNGVKKV
Sbjct: 39  MAGSGSYDWADQWDYSDSKDVVTENKKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKV 98

Query: 61  KEGTSLGFQWIKDKYNKTAHKK 83
           KEGTSLGFQWIKDKYNKTAHKK
Sbjct: 99  KEGTSLGFQWIKDKYNKTAHKK 120

[Close]

BLAST of CcUC06G126610 vs. NCBI nr
Match: KAG6589470.1 (Alpha-N-acetylglucosaminidase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.2 bits (391), Expect = 3.4e-34
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1   MAGNGSYDWADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKV 60
           MAGNGSYDWADQWDY+DS D+ TEN KK+GGGN+T KYKQKVGEGLGKTKAVASNGVKKV
Sbjct: 82  MAGNGSYDWADQWDYSDSKDVVTENTKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKV 141

Query: 61  KEGTSLGFQWIKDKYNKTAHKK 83
           KEGTSLGFQWIKDKYNKTAHKK
Sbjct: 142 KEGTSLGFQWIKDKYNKTAHKK 163

[Close]

BLAST of CcUC06G126610 vs. NCBI nr
Match: XP_022921775.1 (uncharacterized protein LOC111429929 [Cucurbita moschata])

HSP 1 Score: 154.1 bits (388), Expect = 7.6e-34
Identity = 73/82 (89.02%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MAGNGSYDWADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKV 60
          MAGNGSYDWADQWDY+DS D+ TEN KK+GGGN+T KYKQKVGEGLGKTKAVASNGVKKV
Sbjct: 1  MAGNGSYDWADQWDYSDSKDVVTENTKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKV 60

Query: 61 KEGTSLGFQWIKDKYNKTAHKK 83
          K+GTSLGFQWIKDKYNKTAHKK
Sbjct: 61 KQGTSLGFQWIKDKYNKTAHKK 82

[Close]

BLAST of CcUC06G126610 vs. NCBI nr
Match: XP_022988421.1 (uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharacterized protein LOC111485668 [Cucurbita maxima])

HSP 1 Score: 150.6 bits (379), Expect = 8.4e-33
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   MAGNGSYDWADQWDYNDSTDIATENKKKT-GGGNSTAKYKQKVGEGLGKTKAVASNGVKK 60
           MAGNGSYDWADQWDY+DS D+ TE KKK+ GGGN+T KYKQKVGEGLGKTKAVASNGVKK
Sbjct: 39  MAGNGSYDWADQWDYSDSKDVVTETKKKSGGGGNTTTKYKQKVGEGLGKTKAVASNGVKK 98

Query: 61  VKEGTSLGFQWIKDKYNKTAHKK 83
           VKEGTSLGFQWIKDKYNKTAHKK
Sbjct: 99  VKEGTSLGFQWIKDKYNKTAHKK 121

[Close]

BLAST of CcUC06G126610 vs. ExPASy TrEMBL
Match: A0A6J1E6S2 (uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC111429929 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.7e-34
Identity = 73/82 (89.02%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MAGNGSYDWADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKV 60
          MAGNGSYDWADQWDY+DS D+ TEN KK+GGGN+T KYKQKVGEGLGKTKAVASNGVKKV
Sbjct: 1  MAGNGSYDWADQWDYSDSKDVVTENTKKSGGGNTTTKYKQKVGEGLGKTKAVASNGVKKV 60

Query: 61 KEGTSLGFQWIKDKYNKTAHKK 83
          K+GTSLGFQWIKDKYNKTAHKK
Sbjct: 61 KQGTSLGFQWIKDKYNKTAHKK 82

[Close]

BLAST of CcUC06G126610 vs. ExPASy TrEMBL
Match: A0A6J1JCZ5 (uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.1e-33
Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0


Query: 1   MAGNGSYDWADQWDYNDSTDIATENKKKT-GGGNSTAKYKQKVGEGLGKTKAVASNGVKK 60
           MAGNGSYDWADQWDY+DS D+ TE KKK+ GGGN+T KYKQKVGEGLGKTKAVASNGVKK
Sbjct: 39  MAGNGSYDWADQWDYSDSKDVVTETKKKSGGGGNTTTKYKQKVGEGLGKTKAVASNGVKK 98

Query: 61  VKEGTSLGFQWIKDKYNKTAHKK 83
           VKEGTSLGFQWIKDKYNKTAHKK
Sbjct: 99  VKEGTSLGFQWIKDKYNKTAHKK 121

[Close]

BLAST of CcUC06G126610 vs. ExPASy TrEMBL
Match: A0A0A0LUC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.6e-32
Identity = 70/79 (88.61%), Postives = 77/79 (97.47%), Query Frame = 0


Query: 4  NGSYDWADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKVKEG 63
          N SYDWADQWDY+DSTD+ ++NKKKTGGGNS+AKYKQKVGEGLGKTK+VASNGVKKVKEG
Sbjct: 6  NTSYDWADQWDYSDSTDVVSDNKKKTGGGNSSAKYKQKVGEGLGKTKSVASNGVKKVKEG 65

Query: 64 TSLGFQWIKDKYNKTAHKK 83
          TSLGFQWIK+KYNKTAHKK
Sbjct: 66 TSLGFQWIKEKYNKTAHKK 84

[Close]

BLAST of CcUC06G126610 vs. ExPASy TrEMBL
Match: A0A5A7UUQ6 (Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002040 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30
Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 4  NGSYDWADQWDYNDSTDIATENKKKT--GGGNSTAKYKQKVGEGLGKTKAVASNGVKKVK 63
          N SYDWADQWDYNDS D+ T NKKK    GGNS+AKYKQKVGEGLGKTKAVASNGVKKVK
Sbjct: 6  NSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNGVKKVK 65

Query: 64 EGTSLGFQWIKDKYNKTAHKK 83
          EGTSLGFQWIKDKYNKTAHKK
Sbjct: 66 EGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of CcUC06G126610 vs. ExPASy TrEMBL
Match: A0A1S3BW93 (uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30
Identity = 71/81 (87.65%), Postives = 73/81 (90.12%), Query Frame = 0


Query: 4  NGSYDWADQWDYNDSTDIATENKKKT--GGGNSTAKYKQKVGEGLGKTKAVASNGVKKVK 63
          N SYDWADQWDYNDS D+ T NKKK    GGNS+AKYKQKVGEGLGKTKAVASNGVKKVK
Sbjct: 6  NSSYDWADQWDYNDSADVVTNNKKKISGSGGNSSAKYKQKVGEGLGKTKAVASNGVKKVK 65

Query: 64 EGTSLGFQWIKDKYNKTAHKK 83
          EGTSLGFQWIKDKYNKTAHKK
Sbjct: 66 EGTSLGFQWIKDKYNKTAHKK 86

[Close]

BLAST of CcUC06G126610 vs. TAIR 10
Match: AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.3 bits (207), Expect = 6.9e-17
Identity = 43/73 (58.90%), Postives = 54/73 (73.97%), Query Frame = 0


Query: 9  WADQWDYNDSTDIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNGVKKVKEGTSLGF 68
          WA+QWD N  +   T +  +  GG +++KYK+KVG GLGKTKA AS+G+KKVK GTSLG 
Sbjct: 6  WAEQWDSNQQSSGKTTHGGE--GGGASSKYKEKVGAGLGKTKAAASSGLKKVKIGTSLGL 65

Query: 69 QWIKDKYNKTAHK 82
           W+KDKYNKT  K
Sbjct: 66 NWVKDKYNKTTTK 76

[Close]

BLAST of CcUC06G126610 vs. TAIR 10
Match: AT1G19020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48180.1); Has 88 Blast hits to 88 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 78.6 bits (192), Expect = 3.8e-15
Identity = 41/86 (47.67%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 4  NGSYDWADQWDYNDST-------DIATENKKKTGGGNSTAKYKQKVGEGLGKTKAVASNG 63
          NG+  WADQWD +  +         A      +G  ++T KYK+K+G+GL KTKAVAS+G
Sbjct: 2  NGT-SWADQWDNSGDSAKGGRIGSGAVVRSSGSGATSNTTKYKEKMGQGLDKTKAVASSG 61

Query: 64 VKKVKEGTSLGFQWIKDKYNKTAHKK 83
           KK+K G+++GF+W+KDKY+KT HK+
Sbjct: 62 FKKLKTGSAIGFRWVKDKYHKTTHKQ 86

The following BLAST results are available for this feature:

BLAST of CcUC06G126610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879790.1	6.2e-36	93.90	uncharacterized protein LOC120071534 [Benincasa hispida]	[more]
XP_023516550.1	2.6e-34	90.24	uncharacterized protein LOC111780400 [Cucurbita pepo subsp. pepo]	[more]
KAG6589470.1	3.4e-34	90.24	Alpha-N-acetylglucosaminidase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921775.1	7.6e-34	89.02	uncharacterized protein LOC111429929 [Cucurbita moschata]	[more]
XP_022988421.1	8.4e-33	89.16	uncharacterized protein LOC111485668 [Cucurbita maxima] >XP_022988422.1 uncharac...	[more]

BLAST of CcUC06G126610 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G126610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6S2	3.7e-34	89.02	uncharacterized protein LOC111429929 OS=Cucurbita moschata OX=3662 GN=LOC1114299...	[more]
A0A6J1JCZ5	4.1e-33	89.16	uncharacterized protein LOC111485668 OS=Cucurbita maxima OX=3661 GN=LOC111485668...	[more]
A0A0A0LUC7	2.6e-32	88.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G005770 PE=4 SV=1	[more]
A0A5A7UUQ6	1.1e-30	87.65	Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase OS=C...	[more]
A0A1S3BW93	1.1e-30	87.65	uncharacterized protein LOC103493940 OS=Cucumis melo OX=3656 GN=LOC103493940 PE=...	[more]

BLAST of CcUC06G126610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48180.1	6.9e-17	58.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19020.1	3.8e-15	47.67	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33386	OS02G0740600 PROTEIN	coord: 6..80
None	No IPR available	PANTHER	PTHR33386:SF5	OS02G0740600 PROTEIN	coord: 6..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G126610.1	CcUC06G126610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030639	polyketide biosynthetic process
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups