CcUC06G126400 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGAAGGTGTAGGAAGCACCGCAGATACATTGAATCCAAATTCCAAGGGCGGTTGCAGTCCATTTGTTGGGCATAAACCCAGAAACTTCCATCTCCGGCGGTGGGTAATTTTTCTGGTTCTGGTTGTTCGTAGGAGCAAATGCGAATCATTTCCGTGTTGTAGAAGAAGATCTCATATTTGTTGTTCTTACTTCTCCCAACAAATGAGGCCACGCAATGCATTGGTTTGCTACGTGGGCCATCGTTGGCACTTCCTATCATCATTTTTCTTGACGTTTTTCCTAATTTGGCTTATTGTTGTGTGTTTAACTTTTTTCATTGGCTTTTATTTGGTTCTACCCTTTTGGGAAAGTTGGTGGAGTTGATTTTATCCATTATTCTTGGAGAGTCTGAGTCAGCTAAGGTATTTAAATAAGTTATCAATATCTTCATCATCTTCTTCAATTGGATTTATTTTCATTATTCGTTATCTTTACCCTTTATTTTATCATCTATTATTATTTTCCACTATACATTTTTAATATGTATTCACATTTGCCTGTTTTTAAATAGAGCAAAATGAACTAAAACAAATAATTCAAAATCAGTAGGTGATTTTAGGCCTATTAGTCTTGGCAATGAGAGTTATGAAATTAATTGTGTAAAAAACAATAGCTAATTGTCTAAAACTTGTCCTTCATAATATTATCTCAGACAACCAATCAACTTTTGTACCAGGGAGGGCAATTACCGATAATGTTATGATAGACCATAAATTTTTAAACTTCATTCAGAATAAGAAAAAAAGAAAAGAGGTTTTGGCTGCTGTTAAACTAGATCTAAACAAAGCATATGATAGAATTGAATGGTCTTTTCTCATAGCTATAATGACTCGATTAAATTTTGACCAAAGAGTCTCCTCACTTATTTACAATTGCATTTCTTCCACTAATTTTGCTGTTCTTGTTAATGGTGATCCTAGCAAATCCTTTCAACCTAGCGGACGGCTGAAACAAGGCGATCCTCTCTCCCCCGATCTTTTTCTTTTAGTGGTAGAGGGCCTTTCAGCTCTCTTAAACTCTCAGCAATTGGGAGGGAACATTCCCGGTGTATCACTAGGTGCTCATTGCCCATGTATTTCTCACCTTCTATTCGTTGATGATAGTTTAATTTTCTACCGGGCAAATGAATATTGACTTCTCTGTTTTGAAGAACCAACTAAGCAGTTTTGAAGCTGCTTCGGGAGCTAGGATTAATCAAGCAAAGTCAGCAATCTTAATATCTCCGAACGTTAATGAGGACAGAGGTCTATTCTTGTGTGGCATCTTGGGCGTCCTAAAGGTTAAAGAGTTGGACCATTATCTAGGCCCTCTTTGTTGTCAAGGAGCAAAAGCATGAATTTTCAATTCCTGCTGGACTAGATTTGGAAGTCTCTTCAAGGGTGGAAAAGAATTTTTTTTTCTACTTGAGGGAAAGAAATATTTATCAAAAGTGTTGGTCAAGCCATCCCAACTTATGGAATGAGCATTTTTAAACTCCCTAAACAACTATATTCGGAAATTACCAGGGTTTTCTCAAGATTCTAGTGGGGTTCAATAGAAAAGAAAAGAAAGATCCACTGGATCAAGTGGCCGGATTTGTGCCTCCCAAAAGCTTAAGAGATTTAGAAGGTTTTAACAGAGCATTGATTGCAAAACAAGTGTGGCGAATTCATCAGGACTCAGATCTTCTAGTTTCAAAGGTGCTCAAAAGTATTTATTTTAATCATTGTGATATTTTGAATGTTGATATGGGTAGTAGTACATCACATATGTGGAAAAGCTTACACTAGGGAAGTACTTTTCTCAAGGAAGGTCTGCGTTTTAAAGTGGCAAATGGAGCTTCTATCAGAATGTTTAAAGATCTATGGTTACCAAAAGAATGCACTTTCAAACCAAGATGTATAAATATGGATTTCTTTGAGGCAAAAGTAGCTGATTTTATAACTCTAGAGGGTGCTTGGAACACTGGCTTGCTGACTATTGCTACCTCATCGGAAGATACTGCTGTTATAAAAAAAATCCCACTTAACCTGAGGATGGAAGACAAGCTGATTTGGCACTATGACAAGTATGGGAAGTACTCAGTAAAGTCAAGGTATAAATGGTTTCAAAGATCGAGATTCTGCTCTAGTTCTTCCAGTGAGAGCTTATTGAAAGTCCTATGGTCAAAGTTATGGAAGCTAAATGTGCCTCTAAAGATCAGACATTTTATCTGGCGAACCCTAAAGAATATACTTCCCACTAGGACAAACTTACCCAAAAAAAAAAAAAAAAAGGATTGAAATTGTACCTATTTGCCTTGTTTGTGGTCAGCATCAGGAAATTGTCGATCATGCTCTTTTCTCTTGTGAAAGAGCAAAATCAATCTTGAAGAAACTTTTGGGTGAGAAAGTTACAAATTTAGACTTTAATGGCAGCTTCATTGATAGATGGCATAACTTGGTGACTGCTTGTGAGGCAAGCAAAATTGAGCTTCTACCCACGTCTTTCTGGGCTTTTTGGAATGATTGAAATAACCTAGTAAATGGCAAGTCCATCCTCCACCCAGATCTCAAAGCCTCATGGATTATTAGATATTGTGAGACATTCTGGGATTCATCCCACTCCAAGCTTATTGGTGTTGCTTTGTTAGCCAATCCTTGTGGTATGAACTCATCGTGGCTCCCTTCTCCGTGGGGTTTTGTTAAAATTAATAATGATGTCTCTTGGAGCCCCCTTTCCCCTTCGGTGGACCTGGGCATTGTCATCAGAGATAGTTCGGGGGCTATTAAAGTCATCTCTGCCAAAAGTTCTCATTTTGGCTTTGATTGCCCTTCAGCGGAAGCTTTGGCAATTAAAGAAGGATTAATGTTGGCTTTATCATTAGAATTTAGAAACATCATTGTTGAAACTGACTACCTCCAAGTGATAAATCTGATCAGAGGTCTCACACAGTCGGATGCGAAAATCTCTTGCTGGATTGAGAACATGGTTGCTCTGAAAGATAGTTTCAATTCTTGTTCTTCCGTTTGCACTCCCAGAAGTTATAATTCCTTAGCTGATGCAGTAGCAAGGTTTGCGTGA ATGCTGAAGCATCAGGAAATTGTCGATCATGCTCTTTTCTCTTGTGAAAGAGCAAAATCAATCTTGAAGAAACTTTTGGGTGAGAAAGTTACAAATTTAGACTTTAATGGCAGCTTCATTGATAGATGGCATAACTTGGTGACTGCTTGTGAGGCAAGCAAAATTGAGCTTCTACCCACATATTGTGAGACATTCTGGGATTCATCCCACTCCAAGCTTATTGGTGTTGCTTTGTTAGCCAATCCTTGTGGTATGAACTCATCGTGGCTCCCTTCTCCGTGGGGTTTTGTTAAAATTAATAATGATGTCTCTTGGAGCCCCCTTTCCCCTTCGGTGGACCTGGGCATTGTCATCAGAGATAGTTCGGGGGCTATTAAAGTCATCTCTGCCAAAAGTTCTCATTTTGGCTTTGATTGCCCTTCAGCGGAAGCTTTGGCAATTAAAGAAGGATTAATGTTGGCTTTATCATTAGAATTTAGAAACATCATTGTTGAAACTGACTACCTCCAAGTGATAAATCTGATCAGAGGTCTCACACAGTCGGATGCGAAAATCTCTTGCTGGATTGAGAACATGGTTGCTCTGAAAGATAGTTTCAATTCTTGTTCTTCCGTTTGCACTCCCAGAAGTTATAATTCCTTAGCTGATGCAGTAGCAAGGTTTGCGTGA ATGCTGAAGCATCAGGAAATTGTCGATCATGCTCTTTTCTCTTGTGAAAGAGCAAAATCAATCTTGAAGAAACTTTTGGGTGAGAAAGTTACAAATTTAGACTTTAATGGCAGCTTCATTGATAGATGGCATAACTTGGTGACTGCTTGTGAGGCAAGCAAAATTGAGCTTCTACCCACATATTGTGAGACATTCTGGGATTCATCCCACTCCAAGCTTATTGGTGTTGCTTTGTTAGCCAATCCTTGTGGTATGAACTCATCGTGGCTCCCTTCTCCGTGGGGTTTTGTTAAAATTAATAATGATGTCTCTTGGAGCCCCCTTTCCCCTTCGGTGGACCTGGGCATTGTCATCAGAGATAGTTCGGGGGCTATTAAAGTCATCTCTGCCAAAAGTTCTCATTTTGGCTTTGATTGCCCTTCAGCGGAAGCTTTGGCAATTAAAGAAGGATTAATGTTGGCTTTATCATTAGAATTTAGAAACATCATTGTTGAAACTGACTACCTCCAAGTGATAAATCTGATCAGAGGTCTCACACAGTCGGATGCGAAAATCTCTTGCTGGATTGAGAACATGGTTGCTCTGAAAGATAGTTTCAATTCTTGTTCTTCCGTTTGCACTCCCAGAAGTTATAATTCCTTAGCTGATGCAGTAGCAAGGTTTGCGTGA MLKHQEIVDHALFSCERAKSILKKLLGEKVTNLDFNGSFIDRWHNLVTACEASKIELLPTYCETFWDSSHSKLIGVALLANPCGMNSSWLPSPWGFVKINNDVSWSPLSPSVDLGIVIRDSSGAIKVISAKSSHFGFDCPSAEALAIKEGLMLALSLEFRNIIVETDYLQVINLIRGLTQSDAKISCWIENMVALKDSFNSCSSVCTPRSYNSLADAVARFA Homology
BLAST of CcUC06G126400 vs. NCBI nr
Match: XP_015383853.1 (uncharacterized protein LOC107176237 [Citrus sinensis]) HSP 1 Score: 84.0 bits (206), Expect = 1.8e-12 Identity = 66/246 (26.83%), Postives = 105/246 (42.68%), Query Frame = 0
BLAST of CcUC06G126400 vs. NCBI nr
Match: XP_024033146.1 (uncharacterized protein LOC112095446 [Citrus clementina]) HSP 1 Score: 82.8 bits (203), Expect = 4.1e-12 Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 0
BLAST of CcUC06G126400 vs. NCBI nr
Match: XP_015385025.1 (uncharacterized protein LOC107176703 [Citrus sinensis]) HSP 1 Score: 81.6 bits (200), Expect = 9.1e-12 Identity = 50/134 (37.31%), Postives = 72/134 (53.73%), Query Frame = 0
BLAST of CcUC06G126400 vs. NCBI nr
Match: XP_024046732.1 (uncharacterized protein LOC112101057 [Citrus clementina]) HSP 1 Score: 80.9 bits (198), Expect = 1.6e-11 Identity = 49/134 (36.57%), Postives = 72/134 (53.73%), Query Frame = 0
BLAST of CcUC06G126400 vs. NCBI nr
Match: XP_015387366.1 (uncharacterized protein LOC107177674 [Citrus sinensis]) HSP 1 Score: 79.3 bits (194), Expect = 4.5e-11 Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 0
BLAST of CcUC06G126400 vs. ExPASy TrEMBL
Match: A0A2H5Q972 (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_207140 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 4.1e-10 Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 0
BLAST of CcUC06G126400 vs. ExPASy TrEMBL
Match: A0A1R3HC77 (Reverse transcriptase OS=Corchorus capsularis OX=210143 GN=CCACVL1_20291 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 9.2e-10 Identity = 47/141 (33.33%), Postives = 71/141 (50.35%), Query Frame = 0
BLAST of CcUC06G126400 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-09 Identity = 61/248 (24.60%), Postives = 103/248 (41.53%), Query Frame = 0
BLAST of CcUC06G126400 vs. ExPASy TrEMBL
Match: A0A2P6PKD3 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0249781 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-09 Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 0
BLAST of CcUC06G126400 vs. ExPASy TrEMBL
Match: A0A5C7H0P0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022911 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.7e-08 Identity = 68/248 (27.42%), Postives = 104/248 (41.94%), Query Frame = 0
BLAST of CcUC06G126400 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 7.2e-07 Identity = 33/136 (24.26%), Postives = 64/136 (47.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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