CcUC06G126220 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCCAATACCCATTGTCGCCCCCCCGATTCAAGCTTTCCCTTCCCAATTCTCACTTTCTACATTCTCATATCGGAATCGCTCCGATTGCTGACTGAAACTGTTGGCCACCCACGAAAACGGAAGAAACAGGAACAAGGAGAAGGCCCGAAACCTTCGAAGCCAATCGAGAAACGACGTTCAAGAGTTACGGAGAGGCATTTTCATGCCAGCTTCCGCCAATTAATCAAACCCCTCTGGTATTAATGATCATCAAGTTCTTTCTGATTCTGATGCAGAATTTTCCTTTCTTATGATTTCGCACTTTCAATTCTATTCAATTTCATTCTCAATTCCTCAGACGATCAGCTTCTGGGTATGTCTCGCTGCGCTGAAATATCTGTTTTTCTTCTTTTTTGACAGAATTGTAAAGCGGGTTTGGAGTGAGGATGGTTTTGGTGTTGGCTTTGGGGGATTTACATATACCACATAGAGCTCCTGACCTTCCTGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCACATTATCTGCACTGGAAACCTCTGTATCAAAGTATGTTCAAATCATCTTTCTGGGTTTTCATCTTTCCAGCTACTTCTGTTGTGGTACTTGGTGCAATGAATTGTTCTTCTAATTGGTCGCGATCTTACTGGAACTTTCTGCCTACCTATGTTGGTGCATCTTGAAGAGCATTTATAGTCAGAATTTTAGTAATCTCTACAACAGTTGCCAAGTTAAAATCTTAGAATGGAAATGATGATTATATGTCCATGGAAGTCTCCAATCCTCCTTCCCTGTCATCTAATTGTAGTAGAGATTGATATACTTATGAGTAGGACATAAAAGTACTCCAATCTAAAAGAACAATACCAAGTTTATAGTAGAATATGGATGTTCTTGCAAATCTTGTCTTTTAACCATTTGGATAGATGATTTTGGTATCCAACTTCCAACTAAATAGTAATTGGCGGAAACATCATTAGGCTATGTTCTGATTTAGTAAATCTACTATTGATTTGTATGAGTTTTCGGGTTACATTGTGAATTATGAACCCTAGGAAACATGTATTAGATATGTACACTACTTATAGGTAACATATTCGATGCCCCACCCCGTAATTGTTAAACACAGTATACCAATCTGTCATATCCTAACATTGATTTTCCTCATAGCATTAGCCTTACTGATGTTTCTACTAATTTTTGTGTCTGACTTCAAGATTTTTTCCTTAGCTTGTGTTGTGTATTTTTCTTGGATTAGTATGTAAATAGCTGTTTTTCATTTGCTGCGGATTATATCATATTTAAGCTTCTCCCAAGGATCCATCGTCCTAGAGGTTCTGCTGGTAACATCCTTCTGTACCATTGATTTTGTTCAAGAAGGGAAATACAAGTATCTTAGTATTCTGTTGTGGTGATTGTAACAACACTAACTTGGGGTAGTAGTTCAGTCACTTTTTTTTTTTTTTTTTTTAATTCATATATCGAAGTGCTTGGATAATAGCATAAGCTCACCCAATGTGCAATAACCTGAATTTCTCCATTGTGTGTACTGGACCCTTTGGTTATTTTAGTTTTAAACGGAATTTTTTTACAACTTTCAACAATGAACTTTGTTTAATACTTCCTTGTGCTTTAACTCCAAATGTTAAGCTTAGTGATAAATGATAGAAGTTCTTAGATGTAATGAAAAAGAAAACTGTGGATTCAAAAATCTTTTCAGGGAAACTTGCTTGTATTAAATATCTTAGGACTTACTTGAAAACATCAAGTCCACGTCATTGGAATGAGCATGAACTTCTACTTGGATTTCTGTTCATATTATATGGGTTTAGACTTTTTGGGCTTTGATCATTGTGTTCAGCACCAACTTGCATATAATCTTGTCTAATTCATCGTACAAGTAGTGGAGCTTTGTAATTGGTTCCTATCTCCTCAGTAGAAATATTGGTGTGATGGTTCAAAGTTTACTAATGATGTTTCCAGGAAGTTCACGACTACTTGAAAACTATTTGCCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCCGAGACAAAAACTCTGACTATTGGTCAATTTAAATTGGGACTGTGCCATGGGCATCAGGTATTGTTTGTTGCACTTTTTTCATCTTGATCACAGATTATTCCTTATTATTTGTTTAATTAAATAGCAAAATTCATTTTCAAGTGTATTATAGTTTTCACCACTGCGAGCAATCATTACGAGTGGTTTCAGATACAGTGCTCTATTATTAATAGGATCCACCAAAGTTTCCTGTTTTCTTCTTTGGGTTTCTAGAATCATAAACTTAACTTCCTGAATATCTTAACTTCTGATTCATTGTTTTAGTAAACCGTGAATAGAAAATTGTATTTCAACTAAGCAAACAAAACTTCTGCACTGCCAGAAGTCAACACATTAGCAAATAACCGGTGTAACATTGTATAACTTTTCCAACTTTTTGTGGGAGTTAACTTCATACCTATGAATTCTATTTGTTGTTGGCTGGCTAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACATGAAGGAGGTGTGGTGATTAACCCGGGATCTGGAACAGGTGCGTATAGCAGCATCACGTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTCCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACGACAGCTCATTGACTGGACAAATTGGCCTTCATATAAACATAATGAAGTTAATTTCTTTTATGGAGTTATGATGCATGTTAAACAATGCTTGATCTTGCTGCAAAGATGATGTTTCTGTGGTGATTGATCCCAGAAAAGAGTTTTAGGTGTTCTGTTCTTGCTCCTTGTGACTGTGTTTATTTGATATTTGAAGAGAAGCCCTTGGTTGTTA TCTCCAATACCCATTGTCGCCCCCCCGATTCAAGCTTTCCCTTCCCAATTCTCACTTTCTACATTCTCATATCGGAATCGCTCCGATTGCTGACTGAAACTGTTGGCCACCCACGAAAACGGAAGAAACAGGAACAAGGAGAAGGCCCGAAACCTTCGAAGCCAATCGAGAAACGACGTTCAAGAGTTACGGAGAGGCATTTTCATGCCAGCTTCCGCCAATTAATCAAACCCCTCTGAATTGTAAAGCGGGTTTGGAGTGAGGATGGTTTTGGTGTTGGCTTTGGGGGATTTACATATACCACATAGAGCTCCTGACCTTCCTGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCACATTATCTGCACTGGAAACCTCTGTATCAAAGAAGTTCACGACTACTTGAAAACTATTTGCCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCCGAGACAAAAACTCTGACTATTGGTCAATTTAAATTGGGACTGTGCCATGGGCATCAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACATGAAGGAGGTGTGGTGATTAACCCGGGATCTGGAACAGGTGCGTATAGCAGCATCACGTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTCCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACGACAGCTCATTGACTGGACAAATTGGCCTTCATATAAACATAATGAAGTTAATTTCTTTTATGGAGTTATGATGCATGTTAAACAATGCTTGATCTTGCTGCAAAGATGATGTTTCTGTGGTGATTGATCCCAGAAAAGAGTTTTAGGTGTTCTGTTCTTGCTCCTTGTGACTGTGTTTATTTGATATTTGAAGAGAAGCCCTTGGTTGTTA ATGGTTTTGGTGTTGGCTTTGGGGGATTTACATATACCACATAGAGCTCCTGACCTTCCTGAGAAGTTCAAGTCTATGCTTGTTCCTGGCAAGATCCAGCACATTATCTGCACTGGAAACCTCTGTATCAAAGAAGTTCACGACTACTTGAAAACTATTTGCCCGGATTTGCACATTACACGAGGTGAATATGATGAAGAGACTCGCTATCCCGAGACAAAAACTCTGACTATTGGTCAATTTAAATTGGGACTGTGCCATGGGCATCAGGTTATTCCTTGGGGAGACCTAGACTCACTCGCCATGATGCAGAGGCAGCTAGATGTAGACATCCTTGTCACTGGTCACACCCATCAATTTACAGCTTACAAACATGAAGGAGGTGTGGTGATTAACCCGGGATCTGGAACAGGTGCGTATAGCAGCATCACGTATGATGTCAACCCAAGCTTTGTCCTTATGGACATCGATGGCCTCCGTGTTGTGGTCTACGTTTACGAACTCATTGATGGAGAGGTTAAGGTAGACAAGATTGATTTCAAGAAGACAACCACGACAGCTCATTGA MVLVLALGDLHIPHRAPDLPEKFKSMLVPGKIQHIICTGNLCIKEVHDYLKTICPDLHITRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMMQRQLDVDILVTGHTHQFTAYKHEGGVVINPGSGTGAYSSITYDVNPSFVLMDIDGLRVVVYVYELIDGEVKVDKIDFKKTTTTAH Homology
BLAST of CcUC06G126220 vs. NCBI nr
Match: XP_004138157.1 (vacuolar protein sorting-associated protein 29 [Cucumis sativus] >XP_008453189.1 PREDICTED: vacuolar protein sorting-associated protein 29 [Cucumis melo] >XP_038879970.1 vacuolar protein sorting-associated protein 29 [Benincasa hispida] >KAA0057934.1 vacuolar protein sorting-associated protein 29 [Cucumis melo var. makuwa] >KGN63660.1 hypothetical protein Csa_014380 [Cucumis sativus] >TYJ98621.1 vacuolar protein sorting-associated protein 29 [Cucumis melo var. makuwa]) HSP 1 Score: 394.0 bits (1011), Expect = 7.0e-106 Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of CcUC06G126220 vs. NCBI nr
Match: XP_022135231.1 (vacuolar protein sorting-associated protein 29 [Momordica charantia]) HSP 1 Score: 392.5 bits (1007), Expect = 2.0e-105 Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of CcUC06G126220 vs. NCBI nr
Match: KAG6589500.1 (Vacuolar protein sorting-associated protein 29, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 391.7 bits (1005), Expect = 3.5e-105 Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of CcUC06G126220 vs. NCBI nr
Match: XP_022921574.1 (vacuolar protein sorting-associated protein 29-like [Cucurbita moschata] >XP_022987203.1 vacuolar protein sorting-associated protein 29 [Cucurbita maxima] >XP_023515675.1 vacuolar protein sorting-associated protein 29-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7023185.1 Vacuolar protein sorting-associated protein 29 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 391.7 bits (1005), Expect = 3.5e-105 Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of CcUC06G126220 vs. NCBI nr
Match: XP_023529239.1 (vacuolar protein sorting-associated protein 29 [Cucurbita pepo subsp. pepo] >KAG6587529.1 Vacuolar protein sorting-associated protein 29, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021505.1 Vacuolar protein sorting-associated protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 390.2 bits (1001), Expect = 1.0e-104 Identity = 185/188 (98.40%), Postives = 185/188 (98.40%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy Swiss-Prot
Match: Q9STT2 (Vacuolar protein sorting-associated protein 29 OS=Arabidopsis thaliana OX=3702 GN=VPS29 PE=2 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 1.6e-97 Identity = 167/187 (89.30%), Postives = 174/187 (93.05%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy Swiss-Prot
Match: Q7ZV68 (Vacuolar protein sorting-associated protein 29 OS=Danio rerio OX=7955 GN=vps29 PE=2 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.1e-69 Identity = 117/182 (64.29%), Postives = 148/182 (81.32%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy Swiss-Prot
Match: Q9QZ88 (Vacuolar protein sorting-associated protein 29 OS=Mus musculus OX=10090 GN=Vps29 PE=1 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69 Identity = 116/182 (63.74%), Postives = 147/182 (80.77%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy Swiss-Prot
Match: Q5R9Z1 (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii OX=9601 GN=VPS29 PE=2 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69 Identity = 116/182 (63.74%), Postives = 147/182 (80.77%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy Swiss-Prot
Match: B2RZ78 (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus OX=10116 GN=Vps29 PE=1 SV=2) HSP 1 Score: 263.5 bits (672), Expect = 1.9e-69 Identity = 116/182 (63.74%), Postives = 147/182 (80.77%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy TrEMBL
Match: A0A5D3BIV2 (Vacuolar protein sorting-associated protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G002440 PE=3 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-106 Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy TrEMBL
Match: A0A0A0LP31 (Vacuolar protein sorting-associated protein 29 OS=Cucumis sativus OX=3659 GN=Csa_1G009640 PE=3 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-106 Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy TrEMBL
Match: A0A1S3BWS4 (Vacuolar protein sorting-associated protein 29 OS=Cucumis melo OX=3656 GN=LOC103493980 PE=3 SV=1) HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-106 Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy TrEMBL
Match: A0A6J1C031 (Vacuolar protein sorting-associated protein 29 OS=Momordica charantia OX=3673 GN=LOC111007245 PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 9.9e-106 Identity = 186/188 (98.94%), Postives = 187/188 (99.47%), Query Frame = 0
BLAST of CcUC06G126220 vs. ExPASy TrEMBL
Match: A0A6J1JIS6 (Vacuolar protein sorting-associated protein 29 OS=Cucurbita maxima OX=3661 GN=LOC111484824 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.7e-105 Identity = 186/188 (98.94%), Postives = 186/188 (98.94%), Query Frame = 0
BLAST of CcUC06G126220 vs. TAIR 10
Match: AT3G47810.2 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 356.7 bits (914), Expect = 1.2e-98 Identity = 167/187 (89.30%), Postives = 174/187 (93.05%), Query Frame = 0
BLAST of CcUC06G126220 vs. TAIR 10
Match: AT3G47810.1 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 356.7 bits (914), Expect = 1.2e-98 Identity = 167/187 (89.30%), Postives = 174/187 (93.05%), Query Frame = 0
BLAST of CcUC06G126220 vs. TAIR 10
Match: AT3G47810.3 (Calcineurin-like metallo-phosphoesterase superfamily protein ) HSP 1 Score: 356.7 bits (914), Expect = 1.2e-98 Identity = 167/187 (89.30%), Postives = 174/187 (93.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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