CcUC06G125660 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G125660
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	50S ribosomal protein L7/L12
Location	CicolChr06: 28052411 .. 28055814 (+)
RNA-Seq Expression	CcUC06G125660
Synteny	CcUC06G125660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGCGATTTTCAAACCATTCGAACCTGAATGCCGTTGGGTGCCAAAGCCTTTTCCACAAGGATTCTTGCGTTTTCGCTTCACTCTTCATTTCTGAAGTTCACGATATTGCAACCCTCCCTCTCTCTATTGGACTCCGCCGTTCGCCGTCGAAGAGCTGGTGTTGCTGCCACTCACTTCTCTCAGGTTCGGTTTTTGAATGCTTTTATTTTATTTTATTTTTATTTTTTTATTTTTTGGCTATTTTTTGGCTATTTTTCCCTTTTGTGATTGTGGGTTTCAAAATCTAAGGAGAAATGATGCTTTACGAGTTTCTAATGTAGACAGTGGAAACTCTTGGGTACCTATGTAAGTGCTAATTGGATTTATTTACTTTTTCACCCGTCTATGTAAGTTTGTTCTCTTTATAGCTTTATTGGCCTTTTTTGTTCTATTGTAGCTTCAATCACTCATCCTCACCCATCATTTTCTTTGATTTTCTAAAATTTCTGAATGTCTGGGTTTTATTCGATTTTGTTTGAGAGTTTTAAATGAGTCAATGTGGCAATGTTTCTGAGATTTGGATTTTTTTTCTGTGCTGGTAATGCTTAGAGCTTGAAAGGGAACCACATTTTGGGTTTGATGTGTTGGTGTTAATTTATGAAGGAATAATTATGCTGTTTGATGGGAATTTGGAAGGTAAGAGTTGGGGTGAGTTGGGTTGATTTAGTTAAAATAATCAAAACTCCATCAACATTTCAAGTTGGGGGATCAAAGCACTGAGTTGGTAGTTTTTACTTATGTTCGCGAGCCAAACACTCTTTCAAGGACAAAAAAGTAATCGATTAATGTAGATGAAAAATAGAGAGCAAAACTTCAGTTTTCTCCTGAATTCCCCCATATCTCACTCATGGCATAGAAAAATTAGAAGCTAATTCACATTTATAAAATCTAAGAAGAGATTTCAGAATGTTATTAGTTAGCTAAGCTTTGAATTCTATATTACTATTCTCCAACAAACCAAGCTGGCTCCCGTTCTTCTTCATTTGATCAAATTGTTCATGGCATTTCAAAACCTTAGGGTGGTCTTCACTCATCGCTTGATGCGAGGAAATGAACCCTCTGGCACATTCTTATCCTTTGGAGCAAGGTCTCAGTGAAAGCGGTTGAGTCTTCTTGGTGTCTTCTCCATCATTATTAAAATAGAAGTTGTACATCTTAATTTTGAGTTGGTTAATGTTGTCAATAGACCCAATTCTCGGACTATAGCAAAGCAATTCTAGCAAGTGCTTGTCAATCTTTCTAGCCTCACCACAGGAAGATAGTGCATTGGGAGAAACTTCATCGGTTGTAGACGGTTTGTTAGTGAAAAATCCTTGGGGGCAGGGTAACCAAACGCATGAAGTGTCTCAATAAGCTTATGGATGGTTTCCTTCGCCTTGATAATCCCCTAAAAAATGTAGCGTCACATGGTAAAATCCAAGAAATTTCCTGACCTTGTACCAAAATAGATATATTTTCTTCCTCAGTTGGGTAGATTTTTTCAAATTGTAGTCATAGTTCATCACCCTCGCAAAAGCTCTAATAATTTTCCTTATTATGCTCTACTCAGGAACTTTCAAGTGGGACATTACTACTTTTATAGGTGTGAACATCAGTTTGCTTTAGTCAGTTTTCAGCCAAAAACCAAAGACTAAACAAATGGTGCCCAAATGAGGTAACTAGTCTTTAACCGAACCGAGATTTCGATCAATTCACTTAATCAGGTCCTGTTTCTCTCCCGAACTATAAGCATTTTGTAGTAATTGGTCATACATCAAAGAAATGTTTCTTTCTTGTCAAAAAAGAAAAAAAAATCTAATTGTGAACATCCTAAATAACGGTAATAAGCACACAATGGACAAAGTTCAATAACAATGAGATTTGAAAATTGTAAACAACAAATCAAAAGGGGGAATGGGAAAATGAATGCAAATTATAAAGCAAGCACGAGGAGGTGAGCATGTATAGACCATGAATCAAAGAAATGGGTATTAATGAAAGAAATAGAAAATCAAACCTTTAATCTAACAAACCAATGGCAACTGGGTTACAAGAGGAAGATAGAGTGGGTCATTGAGGAATAGAAACCTCATATGTGAGGTGATTTTGTCGAAACGTTGAGACTGCAGCAATTGAGAATGCAGTGTGCAGCGGCAGCTATTGAGACATTTCTGGCAGGAGCGGCGTGTAGAGGGTGCAGTGGCTGGTAATGGGAGGGAGGGGGTGGCTGAAGGTGAAATAGGGTTTATAAAAAGGAAAATGAAAGTGATAGGATCTCAGAGGTAAAAGCCTACACTTGTAGGCATAAAAGAGGGGTGAATACATAAGGTAGTTGATGAGTTGGTTAGTGACATGGAGTGGGGAATATTTGTTAGTTATCTCAGTGTGTATGCGTTATGTAGGGAGAGAGGGGCTGGATAGGGGGTTATCGGATACTTTCATATTGTAATCAAACTCTTAAAGAGAGTTAGGGAGAGATTGAGAAGCTCTTGAATTCTTCCCCCGTTGTTGATAAATAAAATTGAGGCTAAAATCGATGATTTTGCCCTTTATGTAGGGGAGGTGAGAGGGAGGGATGGTTATAACTCTATAACAGCTTATGAGCTTGAACTAATTGTGTTCTACAACTCTGTCCTAGCTTTTATCTACGTTCAGTTAATTGATCTTAGATTTTTGTATTCCACAGGGATTCTAAATACCACCCTCTTACTTTTTCATCTGTGAGAATTGACCTTTGATTTTTGTGCTCCTCAGGAATTTTGTTCCATTATTCAACAATTCCTTGATATTGAATTGAAGAATAATGAAGCTGACTGTAGTTGCACGATCCCTTCAAGTCCGTTCCACACTTGCTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTGCTCCCAGAGACCCAAATGCCAAGCCAAAAAGATACAAGTATCCACTATTTTATGATCCATATGGCCCTAGGCCCCCACCATCTAATAAAATCATTGAGCTTGCTGAAAGGATTGCAGCACTGCCTGCCGATGAGCGTTCCCAGATTGGTCCCACGCTTGGTGAAAGACTTAGACATCCTAAGCTGCAGCCAATTTCAGTGGATGGCTTGGACACGGGGTCCGAAGGAGGGGCCGGGGCAGGAGCTTCCAAGGTGGAGGAGAAAAAAGAAAAAACTGCTTTCGATGTGAAGCTAGAGAAGTTTGACGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTCAGGTCTTTCACTAATCTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAGGAAGCAAATGACATCATTGAAAAACTCAAAGCTGCTGGAGGAGTTGCTGTGATGGCGTAA

mRNA sequence

CTGCGATTTTCAAACCATTCGAACCTGAATGCCGTTGGGTGCCAAAGCCTTTTCCACAAGGATTCTTGCGTTTTCGCTTCACTCTTCATTTCTGAAGTTCACGATATTGCAACCCTCCCTCTCTCTATTGGACTCCGCCGTTCGCCGTCGAAGAGCTGGTGTTGCTGCCACTCACTTCTCTCAGCTGACTGTAGTTGCACGATCCCTTCAAGTCCGTTCCACACTTGCTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTGCTCCCAGAGACCCAAATGCCAAGCCAAAAAGATACAAGTATCCACTATTTTATGATCCATATGGCCCTAGGCCCCCACCATCTAATAAAATCATTGAGCTTGCTGAAAGGATTGCAGCACTGCCTGCCGATGAGCGTTCCCAGATTGGTCCCACGCTTGGTGAAAGACTTAGACATCCTAAGCTGCAGCCAATTTCAGTGGATGGCTTGGACACGGGGTCCGAAGGAGGGGCCGGGGCAGGAGCTTCCAAGGTGGAGGAGAAAAAAGAAAAAACTGCTTTCGATGTGAAGCTAGAGAAGTTTGACGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTCAGGTCTTTCACTAATCTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAGGAAGCAAATGACATCATTGAAAAACTCAAAGCTGCTGGAGGAGTTGCTGTGATGGCGTAA

Coding sequence (CDS)

ATGCCGTTGGGTGCCAAAGCCTTTTCCACAAGGATTCTTGCGTTTTCGCTTCACTCTTCATTTCTGAAGTTCACGATATTGCAACCCTCCCTCTCTCTATTGGACTCCGCCGTTCGCCGTCGAAGAGCTGGTGTTGCTGCCACTCACTTCTCTCAGCTGACTGTAGTTGCACGATCCCTTCAAGTCCGTTCCACACTTGCTAAAATAATTGGGTTGTCGCAGGTCCGCTTCTTTCAGCCTGATTTTGCTCCCAGAGACCCAAATGCCAAGCCAAAAAGATACAAGTATCCACTATTTTATGATCCATATGGCCCTAGGCCCCCACCATCTAATAAAATCATTGAGCTTGCTGAAAGGATTGCAGCACTGCCTGCCGATGAGCGTTCCCAGATTGGTCCCACGCTTGGTGAAAGACTTAGACATCCTAAGCTGCAGCCAATTTCAGTGGATGGCTTGGACACGGGGTCCGAAGGAGGGGCCGGGGCAGGAGCTTCCAAGGTGGAGGAGAAAAAAGAAAAAACTGCTTTCGATGTGAAGCTAGAGAAGTTTGACGCTGCTTCAAAAATTAAGGTGATTAAAGAAGTCAGGTCTTTCACTAATCTGGGTCTGAAGGAGGCAAAAGACTTGGTAGAGAAAGTACCTGCAATTCTTAAGCAAGGGGTGACCAAGGAGGAAGCAAATGACATCATTGAAAAACTCAAAGCTGCTGGAGGAGTTGCTGTGATGGCGTAA

Protein sequence

MPLGAKAFSTRILAFSLHSSFLKFTILQPSLSLLDSAVRRRRAGVAATHFSQLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSNKIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKKEKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIEKLKAAGGVAVMA

Homology

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BLAST of CcUC06G125660 vs. NCBI nr
Match: XP_038905834.1 (50S ribosomal protein L7/L12 [Benincasa hispida] >XP_038905841.1 50S ribosomal protein L7/L12 [Benincasa hispida])

HSP 1 Score: 337.4 bits (864), Expect = 1.0e-88
Identity = 177/191 (92.67%), Postives = 184/191 (96.34%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +LTVVARSLQVRST AKIIGLSQVRFFQ DFA RDPNAKPKRYKYP FYDPYGPRPPPS+
Sbjct: 2   KLTVVARSLQVRSTFAKIIGLSQVRFFQSDFALRDPNAKPKRYKYPPFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KIIELAERIAALPA++R QIGPTL ERL+HPKLQPISVDGLD GSEGGAGAG+SKVEEKK
Sbjct: 62  KIIELAERIAALPAEDRCQIGPTLRERLKHPKLQPISVDGLDMGSEGGAGAGSSKVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE
Sbjct: 122 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

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BLAST of CcUC06G125660 vs. NCBI nr
Match: XP_008450561.1 (PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450569.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450588.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450597.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_016902379.1 PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >KAA0047609.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa] >TYK08266.1 50S ribosomal protein L7/L12 [Cucumis melo var. makuwa])

HSP 1 Score: 328.9 bits (842), Expect = 3.6e-86
Identity = 172/191 (90.05%), Postives = 179/191 (93.72%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +LTVVARSLQ RSTL KIIGLSQVRFFQPDF PRDP AKPK+YKYP FYDPYGPRPPPS+
Sbjct: 2   KLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KII LAERIAALPA ERSQIGPTLGE+LRHPKLQ ISVDGLD GSEGGA AG+S VEEKK
Sbjct: 62  KIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAASKIKVIKEVR+FTNLGLKEAKDLVEKVPAILKQGVTKEEAN IIE
Sbjct: 122 EKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

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BLAST of CcUC06G125660 vs. NCBI nr
Match: XP_011651634.1 (uncharacterized protein LOC101206962 [Cucumis sativus] >XP_011651635.1 uncharacterized protein LOC101206962 [Cucumis sativus] >KGN58328.1 hypothetical protein Csa_017468 [Cucumis sativus])

HSP 1 Score: 328.9 bits (842), Expect = 3.6e-86
Identity = 171/191 (89.53%), Postives = 179/191 (93.72%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +LTVVA+SLQVRST AKIIGLSQVRFFQPDF PRDPNAKPK+YKYP FYDPYGPRPPPS+
Sbjct: 2   KLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KIIELAERI ALPA ER QIGPTLGE+LRHPKLQ ISVDGLD G EGGA AG+S VEEKK
Sbjct: 62  KIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAASKIKVIKEVR+FTNLGLKEAKDLVEKVPAILKQGVTKEEAN IIE
Sbjct: 122 EKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

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BLAST of CcUC06G125660 vs. NCBI nr
Match: XP_022155073.1 (uncharacterized protein LOC111022207 [Momordica charantia] >XP_022155074.1 uncharacterized protein LOC111022207 [Momordica charantia])

HSP 1 Score: 323.6 bits (828), Expect = 1.5e-84
Identity = 168/191 (87.96%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +L  VARSLQV STL K+IG  QVRFFQPDFAPRD  AKPKRYKYP FYDPYGPRPPPS+
Sbjct: 2   KLVAVARSLQVHSTLPKVIGSFQVRFFQPDFAPRDSTAKPKRYKYPPFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KII+LAE+I ALP DER QIGP L ERLRHPKLQPISVDGLD GSEGGAGAG+SKVEEKK
Sbjct: 62  KIIQLAEKIVALPVDERCQIGPALTERLRHPKLQPISVDGLDMGSEGGAGAGSSKVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAA+KIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE
Sbjct: 122 EKTAFDVKLEKFDAAAKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

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BLAST of CcUC06G125660 vs. NCBI nr
Match: XP_022998047.1 (uncharacterized protein LOC111492812 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 4.1e-82
Identity = 162/191 (84.82%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           ++  VA+SLQ RS L KIIGL QVRFFQPDF PRDPNAKPKRYKYP FYDPYGPRPPPSN
Sbjct: 2   KMITVAQSLQARSALPKIIGLLQVRFFQPDFTPRDPNAKPKRYKYPPFYDPYGPRPPPSN 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KII+LAERIAALP DER QIGP L ERL+HPKL+ ISVDG+D GSEGGA  G+SKVEEKK
Sbjct: 62  KIIQLAERIAALPVDERCQIGPALTERLKHPKLEQISVDGMDLGSEGGAATGSSKVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKF+AA+KIKVIKEVR+FTNLGLKEAKDLVEKVPAILKQGVTKEEAN IIE
Sbjct: 122 EKTAFDVKLEKFEAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANSIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

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BLAST of CcUC06G125660 vs. ExPASy Swiss-Prot
Match: P41189 (50S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-15
Identity = 52/132 (39.39%), Postives = 74/132 (56.06%), Query Frame = 0


Query: 111 NKIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEK 170
           + I  + E++++L   + +++   L E        P++V     G    A A        
Sbjct: 2   SNIESIVEKLSSLTLLQAAELSKRLEEEWGVSAAAPVAVVASAAGESAAAVA-------- 61

Query: 171 KEKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDII 230
            EKT F+V LE FDA  KI VIKEVR+ T LGLKEAKD VE  P  LK GV+K+EA ++ 
Sbjct: 62  -EKTEFEVFLEGFDAKKKISVIKEVRAITELGLKEAKDFVESAPKSLKTGVSKDEAEELK 121

Query: 231 EKLKAAGGVAVM 243
           +KL+AAG   ++
Sbjct: 122 KKLEAAGATIIL 124

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BLAST of CcUC06G125660 vs. ExPASy Swiss-Prot
Match: Q2JM48 (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=321332 GN=rplL PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.4e-15
Identity = 53/129 (41.09%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 109 PSNKIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVE 168
           PS ++ ++ E + AL   E S++   + E        P     +       A A A+  E
Sbjct: 2   PSERVAKILEELKALSLLEASELVKAIEETFGVSAAAPAGGMVMAAPVAAAAAAPAAAPE 61

Query: 169 EKKEKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEAND 228
             +E+TAFDV LE   A  KI ++K VR  T LGLK+AKDLVE  P  +K+GV KEEAND
Sbjct: 62  PVEEQTAFDVILEAVPADKKIAILKVVRELTGLGLKDAKDLVEAAPKPVKEGVAKEEAND 121

Query: 229 IIEKLKAAG 238
           I +KL+ AG
Sbjct: 122 IKKKLEEAG 130

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BLAST of CcUC06G125660 vs. ExPASy Swiss-Prot
Match: O22386 (50S ribosomal protein L12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RPL12-2 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 1.0e-14
Identity = 54/136 (39.71%), Postives = 79/136 (58.09%), Query Frame = 0


Query: 110 SNKIIELAERIAALPADERSQIGPTLGERL--RHPKLQPISVDGLDTGSEGGAGAGASKV 169
           S K++EL + IA L  +E   +   L ERL        P +V      + G  GAGA+  
Sbjct: 54  SPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAV----VAAPGAGGAGAAAD 113

Query: 170 EEKKEKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEAN 229
           E   EKT FDV +E+  ++++I  IK VR+ TNL LKEAKDL+E +P  +K+GV+K+EA 
Sbjct: 114 EAPAEKTEFDVVIEEVPSSARIASIKVVRALTNLALKEAKDLIEGLPKKVKEGVSKDEAE 173

Query: 230 DIIEKLKAAGGVAVMA 244
           D  ++L+  G    +A
Sbjct: 174 DAKKQLEEVGAKVSIA 185

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BLAST of CcUC06G125660 vs. ExPASy Swiss-Prot
Match: B3PW58 (50S ribosomal protein L7/L12 OS=Rhizobium etli (strain CIAT 652) OX=491916 GN=rplL PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.3e-14
Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 0


Query: 113 IIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKKE 172
           + ++ E +++L   E +++   L E+       P++V  +     GGAG  A+  EE  E
Sbjct: 4   LAKIVEDLSSLTVLEAAELSKLLEEKWGVSAAAPVAVAAV----AGGAGGAAAPAEE--E 63

Query: 173 KTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIEK 232
           KT FDV L     A+KI VIKEVR+ T LGLKEAKDLVE  P  +K+GV+K EA DI +K
Sbjct: 64  KTEFDVILTD-AGANKINVIKEVRAITGLGLKEAKDLVEGAPKAVKEGVSKAEAADIKKK 123

Query: 233 LKAAGGVA 241
           L+ AG  A
Sbjct: 124 LEDAGAKA 124

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BLAST of CcUC06G125660 vs. ExPASy Swiss-Prot
Match: Q2S1Q4 (50S ribosomal protein L7/L12 OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=rplL PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-14
Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 0


Query: 113 IIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKKE 172
           I ELAE++  L   E +++   L E      +QP S  G+   ++GG GA     EE  E
Sbjct: 4   IEELAEQLVGLTIQEANELANHLEEEY---DIQPASA-GVAVAADGGGGADGDAEEE--E 63

Query: 173 KTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIEK 232
           +TAFDV L      +KI+VIKEVRS T +GLKEAK LV++ P  + +GV++EEA+D+  +
Sbjct: 64  QTAFDVVLTGI-GGNKIQVIKEVRSITGMGLKEAKSLVDEAPNPVSEGVSREEADDLKAQ 122

Query: 233 LKAAGG 239
           ++ AGG
Sbjct: 124 IEDAGG 122

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BLAST of CcUC06G125660 vs. ExPASy TrEMBL
Match: A0A1S3BPI3 (50S ribosomal protein L7/L12 OS=Cucumis melo OX=3656 GN=LOC103492120 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 172/191 (90.05%), Postives = 179/191 (93.72%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +LTVVARSLQ RSTL KIIGLSQVRFFQPDF PRDP AKPK+YKYP FYDPYGPRPPPS+
Sbjct: 2   KLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KII LAERIAALPA ERSQIGPTLGE+LRHPKLQ ISVDGLD GSEGGA AG+S VEEKK
Sbjct: 62  KIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAASKIKVIKEVR+FTNLGLKEAKDLVEKVPAILKQGVTKEEAN IIE
Sbjct: 122 EKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

[Close]

BLAST of CcUC06G125660 vs. ExPASy TrEMBL
Match: A0A5A7U2A3 (50S ribosomal protein L7/L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G00400 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 172/191 (90.05%), Postives = 179/191 (93.72%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +LTVVARSLQ RSTL KIIGLSQVRFFQPDF PRDP AKPK+YKYP FYDPYGPRPPPS+
Sbjct: 2   KLTVVARSLQARSTLTKIIGLSQVRFFQPDFTPRDPKAKPKKYKYPPFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KII LAERIAALPA ERSQIGPTLGE+LRHPKLQ ISVDGLD GSEGGA AG+S VEEKK
Sbjct: 62  KIIALAERIAALPAAERSQIGPTLGEKLRHPKLQEISVDGLDMGSEGGAAAGSSNVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAASKIKVIKEVR+FTNLGLKEAKDLVEKVPAILKQGVTKEEAN IIE
Sbjct: 122 EKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

[Close]

BLAST of CcUC06G125660 vs. ExPASy TrEMBL
Match: A0A0A0L907 (Ribosomal_L12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G623960 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 171/191 (89.53%), Postives = 179/191 (93.72%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +LTVVA+SLQVRST AKIIGLSQVRFFQPDF PRDPNAKPK+YKYP FYDPYGPRPPPS+
Sbjct: 2   KLTVVAQSLQVRSTFAKIIGLSQVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KIIELAERI ALPA ER QIGPTLGE+LRHPKLQ ISVDGLD G EGGA AG+S VEEKK
Sbjct: 62  KIIELAERIVALPAAERCQIGPTLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAASKIKVIKEVR+FTNLGLKEAKDLVEKVPAILKQGVTKEEAN IIE
Sbjct: 122 EKTAFDVKLEKFDAASKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

[Close]

BLAST of CcUC06G125660 vs. ExPASy TrEMBL
Match: A0A6J1DM08 (uncharacterized protein LOC111022207 OS=Momordica charantia OX=3673 GN=LOC111022207 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 7.3e-85
Identity = 168/191 (87.96%), Postives = 176/191 (92.15%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +L  VARSLQV STL K+IG  QVRFFQPDFAPRD  AKPKRYKYP FYDPYGPRPPPS+
Sbjct: 2   KLVAVARSLQVHSTLPKVIGSFQVRFFQPDFAPRDSTAKPKRYKYPPFYDPYGPRPPPSD 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KII+LAE+I ALP DER QIGP L ERLRHPKLQPISVDGLD GSEGGAGAG+SKVEEKK
Sbjct: 62  KIIQLAEKIVALPVDERCQIGPALTERLRHPKLQPISVDGLDMGSEGGAGAGSSKVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKFDAA+KIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE
Sbjct: 122 EKTAFDVKLEKFDAAAKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

[Close]

BLAST of CcUC06G125660 vs. ExPASy TrEMBL
Match: A0A6J1K6S5 (uncharacterized protein LOC111492812 OS=Cucurbita maxima OX=3661 GN=LOC111492812 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.0e-82
Identity = 162/191 (84.82%), Postives = 174/191 (91.10%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           ++  VA+SLQ RS L KIIGL QVRFFQPDF PRDPNAKPKRYKYP FYDPYGPRPPPSN
Sbjct: 2   KMITVAQSLQARSALPKIIGLLQVRFFQPDFTPRDPNAKPKRYKYPPFYDPYGPRPPPSN 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KII+LAERIAALP DER QIGP L ERL+HPKL+ ISVDG+D GSEGGA  G+SKVEEKK
Sbjct: 62  KIIQLAERIAALPVDERCQIGPALTERLKHPKLEQISVDGMDLGSEGGAATGSSKVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKF+AA+KIKVIKEVR+FTNLGLKEAKDLVEKVPAILKQGVTKEEAN IIE
Sbjct: 122 EKTAFDVKLEKFEAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANSIIE 181

Query: 232 KLKAAGGVAVM 243
           K+KAAGGVAVM
Sbjct: 182 KIKAAGGVAVM 192

[Close]

BLAST of CcUC06G125660 vs. TAIR 10
Match: AT3G06040.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.4e-58
Identity = 124/191 (64.92%), Postives = 146/191 (76.44%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +L  + R+++ R    ++I   QVRF Q D   +   AKPK+YKYP  YDPYGPRP PS+
Sbjct: 2   KLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVSK---AKPKKYKYPSVYDPYGPRPQPSS 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KI+ELAERIAAL  +ER QIGP L E LR PK Q IS DG+    + GAG     VEEKK
Sbjct: 62  KIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAG----NVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKF+A+ KIKVIKEVR+FT+LGLKEAK+LVEKVPAILKQGVTKEEAN+II 
Sbjct: 122 EKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIA 181

Query: 232 KLKAAGGVAVM 243
           K+KA GG+AVM
Sbjct: 182 KIKAVGGIAVM 185

[Close]

BLAST of CcUC06G125660 vs. TAIR 10
Match: AT3G06040.2 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.4e-58
Identity = 124/191 (64.92%), Postives = 146/191 (76.44%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +L  + R+++ R    ++I   QVRF Q D   +   AKPK+YKYP  YDPYGPRP PS+
Sbjct: 2   KLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVSK---AKPKKYKYPSVYDPYGPRPQPSS 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KI+ELAERIAAL  +ER QIGP L E LR PK Q IS DG+    + GAG     VEEKK
Sbjct: 62  KIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAG----NVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKF+A+ KIKVIKEVR+FT+LGLKEAK+LVEKVPAILKQGVTKEEAN+II 
Sbjct: 122 EKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIA 181

Query: 232 KLKAAGGVAVM 243
           K+KA GG+AVM
Sbjct: 182 KIKAVGGIAVM 185

[Close]

BLAST of CcUC06G125660 vs. TAIR 10
Match: AT3G06040.3 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )

HSP 1 Score: 222.2 bits (565), Expect = 4.4e-58
Identity = 124/191 (64.92%), Postives = 146/191 (76.44%), Query Frame = 0


Query: 52  QLTVVARSLQVRSTLAKIIGLSQVRFFQPDFAPRDPNAKPKRYKYPLFYDPYGPRPPPSN 111
           +L  + R+++ R    ++I   QVRF Q D   +   AKPK+YKYP  YDPYGPRP PS+
Sbjct: 2   KLISLVRNVRSRQCQPEVIWSVQVRFLQQDSVSK---AKPKKYKYPSVYDPYGPRPQPSS 61

Query: 112 KIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGSEGGAGAGASKVEEKK 171
           KI+ELAERIAAL  +ER QIGP L E LR PK Q IS DG+    + GAG     VEEKK
Sbjct: 62  KIMELAERIAALSPEERKQIGPALNEHLRLPKQQMISSDGIGAKQDTGAG----NVEEKK 121

Query: 172 EKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDLVEKVPAILKQGVTKEEANDIIE 231
           EKTAFDVKLEKF+A+ KIKVIKEVR+FT+LGLKEAK+LVEKVPAILKQGVTKEEAN+II 
Sbjct: 122 EKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVTKEEANEIIA 181

Query: 232 KLKAAGGVAVM 243
           K+KA GG+AVM
Sbjct: 182 KIKAVGGIAVM 185

[Close]

BLAST of CcUC06G125660 vs. TAIR 10
Match: AT1G70190.1 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like )

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26
Identity = 68/153 (44.44%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 97  PLFYDPYGPRPPPSNKIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGS 156
           P  +DP   R PP++++  L + I++L   E S++G  + ++    +L  ++V     G 
Sbjct: 55  PATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPGAGG 114

Query: 157 EGGAGAGASKV-------EEKKEKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDL 216
             G G G   V       E K EKT F++KLE F+A++KIK+IKE+RSFT+LGLKEAK L
Sbjct: 115 GVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKAL 174

Query: 217 VEKVPAILKQGVTKEEANDIIEKLKAAGGVAVM 243
           VEK PAILK G++KEE   I+EKLKA G   V+
Sbjct: 175 VEKTPAILKAGLSKEEGEKILEKLKALGAKVVL 207

[Close]

BLAST of CcUC06G125660 vs. TAIR 10
Match: AT1G70190.2 (Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like )

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26
Identity = 68/153 (44.44%), Postives = 96/153 (62.75%), Query Frame = 0


Query: 97  PLFYDPYGPRPPPSNKIIELAERIAALPADERSQIGPTLGERLRHPKLQPISVDGLDTGS 156
           P  +DP   R PP++++  L + I++L   E S++G  + ++    +L  ++V     G 
Sbjct: 55  PATFDPTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPGAGG 114

Query: 157 EGGAGAGASKV-------EEKKEKTAFDVKLEKFDAASKIKVIKEVRSFTNLGLKEAKDL 216
             G G G   V       E K EKT F++KLE F+A++KIK+IKE+RSFT+LGLKEAK L
Sbjct: 115 GVGVGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKAL 174

Query: 217 VEKVPAILKQGVTKEEANDIIEKLKAAGGVAVM 243
           VEK PAILK G++KEE   I+EKLKA G   V+
Sbjct: 175 VEKTPAILKAGLSKEEGEKILEKLKALGAKVVL 207

The following BLAST results are available for this feature:

BLAST of CcUC06G125660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905834.1	1.0e-88	92.67	50S ribosomal protein L7/L12 [Benincasa hispida] >XP_038905841.1 50S ribosomal p...	[more]
XP_008450561.1	3.6e-86	90.05	PREDICTED: 50S ribosomal protein L7/L12 [Cucumis melo] >XP_008450569.1 PREDICTED...	[more]
XP_011651634.1	3.6e-86	89.53	uncharacterized protein LOC101206962 [Cucumis sativus] >XP_011651635.1 uncharact...	[more]
XP_022155073.1	1.5e-84	87.96	uncharacterized protein LOC111022207 [Momordica charantia] >XP_022155074.1 uncha...	[more]
XP_022998047.1	4.1e-82	84.82	uncharacterized protein LOC111492812 [Cucurbita maxima]	[more]

BLAST of CcUC06G125660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41189	2.6e-15	39.39	50S ribosomal protein L7/L12 OS=Liberibacter africanus OX=34020 GN=rplL PE=3 SV=...	[more]
Q2JM48	3.4e-15	41.09	50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain JA-2-3B'a(2-13)) OX=32...	[more]
O22386	1.0e-14	39.71	50S ribosomal protein L12, chloroplastic OS=Oryza sativa subsp. japonica OX=3994...	[more]
B3PW58	1.3e-14	43.75	50S ribosomal protein L7/L12 OS=Rhizobium etli (strain CIAT 652) OX=491916 GN=rp...	[more]
Q2S1Q4	1.7e-14	42.86	50S ribosomal protein L7/L12 OS=Salinibacter ruber (strain DSM 13855 / M31) OX=3...	[more]

BLAST of CcUC06G125660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPI3	1.7e-86	90.05	50S ribosomal protein L7/L12 OS=Cucumis melo OX=3656 GN=LOC103492120 PE=4 SV=1	[more]
A0A5A7U2A3	1.7e-86	90.05	50S ribosomal protein L7/L12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L907	1.7e-86	89.53	Ribosomal_L12 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G6239...	[more]
A0A6J1DM08	7.3e-85	87.96	uncharacterized protein LOC111022207 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1K6S5	2.0e-82	84.82	uncharacterized protein LOC111492812 OS=Cucurbita maxima OX=3661 GN=LOC111492812...	[more]

BLAST of CcUC06G125660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06040.1	4.4e-58	64.92	Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr...	[more]
AT3G06040.2	4.4e-58	64.92	Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr...	[more]
AT3G06040.3	4.4e-58	64.92	Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family pr...	[more]
AT1G70190.1	2.0e-26	44.44	Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/a...	[more]
AT1G70190.2	2.0e-26	44.44	Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/a...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	GENE3D	3.30.1390.10		coord: 169..242 e-value: 1.7E-23 score: 84.5
IPR014719	Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like	SUPERFAMILY	54736	ClpS-like	coord: 172..241
IPR013823	Ribosomal protein L7/L12, C-terminal	PFAM	PF00542	Ribosomal_L12	coord: 176..239 e-value: 7.7E-23 score: 80.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..168
None	No IPR available	PANTHER	PTHR45987:SF6	RIBOSOMAL PROTEIN L12/ ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS FAMILY PROTEIN	coord: 53..242
IPR000206	Ribosomal protein L7/L12	PANTHER	PTHR45987	39S RIBOSOMAL PROTEIN L12	coord: 53..242
IPR000206	Ribosomal protein L7/L12	CDD	cd00387	Ribosomal_L7_L12	coord: 112..242 e-value: 5.97154E-38 score: 127.272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G125660.1	CcUC06G125660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006412	translation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003735	structural constituent of ribosome