CcUC06G125360 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G125360
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 27805095 .. 27805589 (+)
RNA-Seq ExpressionCcUC06G125360
SyntenyCcUC06G125360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAATGACAATGAAGGCATGCATAAACAACAAGAAGATTAAGATGTAAGGGAACTGATTAGATCATATTGAGCTCAGAAACCTCAAATCATCAATTGAATTCATTGATGTAACAGCAGCAGAGTGAAAAATGATTCAGCCAAACAAAAGTATGAAGACATCGATTCAATCCAAATCAAGAAGCTCAAAACGTAGAGAATAGTAAGTGAACAGAAAGAGGCATTACCAGTATGGGCTGTTCGATACGATCTTCGCTCTGATTATGGTGAACTACAAACAAAACGAGTCCTACAATTGTGAAAATCCCAAAAAGCGCCCAGATCCAATGCGAAAACCTCCGTCGAACCGGGCGGCGAAAGTCAGCAGGCCGCCGCCTCATCTTTCACCGATTACTTCCCTCAATTCAACACGAAATCAACAATCCAAACCGACCCATCTCCCAGATTCAATCAAAAAACACAAAAATTTCCAGCATATAGATTCTTCTGCTCACTAA

mRNA sequence

GGAATGACAATGAAGGCATGCATAAACAACAAGAAGATTAAGATAAAGAGGCATTACCAGTATGGGCTGTTCGATACGATCTTCGCTCTGATTATGGTGAACTACAAACAAAACGAGTCCTACAATTGTGAAAATCCCAAAAAGCGCCCAGATCCAATGCGAAAACCTCCGTCGAACCGGGCGGCGAAAGTCAGCAGGCCGCCGCCTCATCTTTCACCGATTACTTCCCTCAATTCAACACGAAATCAACAATCCAAACCGACCCATCTCCCAGATTCAATCAAAAAACACAAAAATTTCCAGCATATAGATTCTTCTGCTCACTAA

Coding sequence (CDS)

GGAATGACAATGAAGGCATGCATAAACAACAAGAAGATTAAGATAAAGAGGCATTACCAGTATGGGCTGTTCGATACGATCTTCGCTCTGATTATGGTGAACTACAAACAAAACGAGTCCTACAATTGTGAAAATCCCAAAAAGCGCCCAGATCCAATGCGAAAACCTCCGTCGAACCGGGCGGCGAAAGTCAGCAGGCCGCCGCCTCATCTTTCACCGATTACTTCCCTCAATTCAACACGAAATCAACAATCCAAACCGACCCATCTCCCAGATTCAATCAAAAAACACAAAAATTTCCAGCATATAGATTCTTCTGCTCACTAA

Protein sequence

GMTMKACINNKKIKIKRHYQYGLFDTIFALIMVNYKQNESYNCENPKKRPDPMRKPPSNRAAKVSRPPPHLSPITSLNSTRNQQSKPTHLPDSIKKHKNFQHIDSSAH
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..56

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G125360.1CcUC06G125360.1mRNA