CcUC06G125200 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G125200
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr06: 27624335 .. 27624865 (+)
RNA-Seq Expression	CcUC06G125200
Synteny	CcUC06G125200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAAAACAAGAAACGAACACACAAAGACGAAGAGGGACCGAGCTCGAATGATAGCGAAACGGTTTGAAGTCAAGAAGCTGTCAATAAGGCAAAAGCTTGGCTTCACAGAGAAGCTTGAAAAAGCCACAAAGCAAAGAATGAAGGTTTTTTGTATCAGAAGAACTCTGCCTCAGATCAAATTTGGGATATCATTCACAATTCCAGACAGAATGGCTACGGAGATTAATGACAGGAAGATGATAAGTGGATTACACCCACTGAGAATCACTAGAGTTCCATGCGGTGGGCCAATGGAGTTTCATGAAATTGTAAAAGAAGCTGAGAAAGGTTCAGCTCCATTGAAGAACACGCAGCAAGGCAAGCCACCAAATCCTAAAGCATCATATCATAGGAGCTGCTTGAATGAGTGGCATCCTCAAGTGTTTCATTTCATATCTAATCATTAATCCTGAAATATGGGGTAGGGGTATTAGACCTCTAACCTCGAGGTCAATAACACAAGTCTTGTGCTAATTGAGCTATGTTGA

mRNA sequence

ATGACCAAAACAAGAAACGAACACACAAAGACGAAGAGGGACCGAGCTCGAATGATAGCGAAACGGTTTGAAGTCAAGAAGCTGTCAATAAGGCAAAAGCTTGGCTTCACAGAGAAGCTTGAAAAAGCCACAAAGCAAAGAATGAAGGTTTTTTGTATCAGAAGAACTCTGCCTCAGATCAAATTTGGGATATCATTCACAATTCCAGACAGAATGGCTACGGAGATTAATGACAGGAAGATGATAAGTGGATTACACCCACTGAGAATCACTAGAGTTCCATGCGGTGGGCCAATGGAGTTTCATGAAATTGTAAAAGAAGCTGAGAAAGGTTCAGCTCCATTGAAGAACACGCAGCAAGGCAAGCCACCAAATCCTAAAGCATCATATCATAGGAGCTGCTTGAATGAGTGGCATCCTCAAACCTCTAACCTCGAGGTCAATAACACAAGTCTTGTGCTAATTGAGCTATGTTGA

Coding sequence (CDS)

ATGACCAAAACAAGAAACGAACACACAAAGACGAAGAGGGACCGAGCTCGAATGATAGCGAAACGGTTTGAAGTCAAGAAGCTGTCAATAAGGCAAAAGCTTGGCTTCACAGAGAAGCTTGAAAAAGCCACAAAGCAAAGAATGAAGGTTTTTTGTATCAGAAGAACTCTGCCTCAGATCAAATTTGGGATATCATTCACAATTCCAGACAGAATGGCTACGGAGATTAATGACAGGAAGATGATAAGTGGATTACACCCACTGAGAATCACTAGAGTTCCATGCGGTGGGCCAATGGAGTTTCATGAAATTGTAAAAGAAGCTGAGAAAGGTTCAGCTCCATTGAAGAACACGCAGCAAGGCAAGCCACCAAATCCTAAAGCATCATATCATAGGAGCTGCTTGAATGAGTGGCATCCTCAAACCTCTAACCTCGAGGTCAATAACACAAGTCTTGTGCTAATTGAGCTATGTTGA

Protein sequence

MTKTRNEHTKTKRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQIKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQQGKPPNPKASYHRSCLNEWHPQTSNLEVNNTSLVLIELC

Homology

[Close]

BLAST of CcUC06G125200 vs. NCBI nr
Match: KAG6589576.1 (hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.6 bits (540), Expect = 2.4e-51
Identity = 110/141 (78.01%), Postives = 122/141 (86.52%), Query Frame = 0


Query: 1   MTKTRNEHTKTKRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQI 60
           M KTR +H+KTKR +AR IAK+F+VK LSIRQKLG TEK  K +K+ M  F IRRTLP+ 
Sbjct: 1   MAKTRGKHSKTKRGQARAIAKQFKVKNLSIRQKLGLTEKPAKVSKEGMGFF-IRRTLPR- 60

Query: 61  KFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQQ 120
           KFGISFTIPDRMATEIND+K ISGLHPLRITRVP GGPMEFH +VKEAEKGSAPLKN QQ
Sbjct: 61  KFGISFTIPDRMATEINDKKRISGLHPLRITRVPSGGPMEFHAVVKEAEKGSAPLKNQQQ 120

Query: 121 GKPPNPKASYHRSCLNEWHPQ 142
           G+PPNPKA+YHRS LNEWHPQ
Sbjct: 121 GRPPNPKAAYHRSRLNEWHPQ 139

[Close]

BLAST of CcUC06G125200 vs. NCBI nr
Match: KGN63749.1 (hypothetical protein Csa_013996 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 6.6e-49
Identity = 109/150 (72.67%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 1   MTKTRNEHTKT-KRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQ 60
           M KTRN++ K  KRDRAR IAKRF V+  + RQKL  TEKLE+ +K+RM+V    R L +
Sbjct: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFT-RQKLVLTEKLEETSKERMEV----RALHE 60

Query: 61  IKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQ 120
           IKFGISFTIPDRMATEI+D+K ISGLHPLRITRVP GGPMEFHEIVKEAEKGSAPLKN Q
Sbjct: 61  IKFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQ 120

Query: 121 QGKPPNPKASYHRSCLNEWHPQTSNLEVNN 150
           +GKPPNPKA+YHRSCLNEWHPQ  +   N+
Sbjct: 121 KGKPPNPKAAYHRSCLNEWHPQVFHFISNS 145

[Close]

BLAST of CcUC06G125200 vs. NCBI nr
Match: KAA0058005.1 (hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 9.0e-46
Identity = 104/150 (69.33%), Postives = 118/150 (78.67%), Query Frame = 0


Query: 1   MTKTRNEHTK-TKRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQ 60
           M KTRN++TK  KRD+AR IAKRF V K          EKLE+A+K+RM+V    RT+ Q
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKRFRVLK----------EKLEEASKERMEV----RTVHQ 60

Query: 61  IKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQ 120
           IKFGISFTIPDRM TEIND+K ISGL PLRITRVPCGGPMEFHEIVKEAEKGSAPLKN +
Sbjct: 61  IKFGISFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHK 120

Query: 121 QGKPPNPKASYHRSCLNEWHPQTSNLEVNN 150
           +GKPPNPK +YHRSC NEWHPQ  +   N+
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136

[Close]

BLAST of CcUC06G125200 vs. NCBI nr
Match: TYK28377.1 (hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-45
Identity = 104/150 (69.33%), Postives = 119/150 (79.33%), Query Frame = 0


Query: 1   MTKTRNEHTK-TKRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQ 60
           M KTRN++TK  KRD+AR IAK+F V K          EKLE+A+K+RM+V    RTL +
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKQFRVLK----------EKLEEASKERMEV----RTLHK 60

Query: 61  IKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQ 120
           IKFGISFTIPDRMATEIND+K ISGL PLRITRVPCGGPMEFHEIVKEAEKGSAPLKN +
Sbjct: 61  IKFGISFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHK 120

Query: 121 QGKPPNPKASYHRSCLNEWHPQTSNLEVNN 150
           +GKPPNPK +YHRSC NEWHPQ  +   N+
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136

[Close]

BLAST of CcUC06G125200 vs. NCBI nr
Match: PON92695.1 (hypothetical protein TorRG33x02_115550 [Trema orientale])

HSP 1 Score: 115.5 bits (288), Expect = 4.1e-22
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 51  FCIRRTLPQIKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEK 110
           FC  R  P+ KFGISF +PDR+A EI+D+K I G HP+RITR+P GGP EFH +V+EAEK
Sbjct: 3   FCALRAQPK-KFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEAEK 62

Query: 111 GSAPLKNTQQ---GKPPNPKASYHRSCLNEWHPQ 142
            S PLK   +      PNPK +YHRS +N+WHP+
Sbjct: 63  ESRPLKKYHENVMATGPNPKKAYHRSHMNDWHPK 95

[Close]

BLAST of CcUC06G125200 vs. ExPASy TrEMBL
Match: A0A0A0LRV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.2e-49
Identity = 109/150 (72.67%), Postives = 124/150 (82.67%), Query Frame = 0


Query: 1   MTKTRNEHTKT-KRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQ 60
           M KTRN++ K  KRDRAR IAKRF V+  + RQKL  TEKLE+ +K+RM+V    R L +
Sbjct: 1   MAKTRNKNIKAKKRDRARTIAKRFRVENFT-RQKLVLTEKLEETSKERMEV----RALHE 60

Query: 61  IKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQ 120
           IKFGISFTIPDRMATEI+D+K ISGLHPLRITRVP GGPMEFHEIVKEAEKGSAPLKN Q
Sbjct: 61  IKFGISFTIPDRMATEISDKKRISGLHPLRITRVPYGGPMEFHEIVKEAEKGSAPLKNQQ 120

Query: 121 QGKPPNPKASYHRSCLNEWHPQTSNLEVNN 150
           +GKPPNPKA+YHRSCLNEWHPQ  +   N+
Sbjct: 121 KGKPPNPKAAYHRSCLNEWHPQVFHFISNS 145

[Close]

BLAST of CcUC06G125200 vs. ExPASy TrEMBL
Match: A0A5A7UWL1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003090 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 4.3e-46
Identity = 104/150 (69.33%), Postives = 118/150 (78.67%), Query Frame = 0


Query: 1   MTKTRNEHTK-TKRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQ 60
           M KTRN++TK  KRD+AR IAKRF V K          EKLE+A+K+RM+V    RT+ Q
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKRFRVLK----------EKLEEASKERMEV----RTVHQ 60

Query: 61  IKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQ 120
           IKFGISFTIPDRM TEIND+K ISGL PLRITRVPCGGPMEFHEIVKEAEKGSAPLKN +
Sbjct: 61  IKFGISFTIPDRMTTEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHK 120

Query: 121 QGKPPNPKASYHRSCLNEWHPQTSNLEVNN 150
           +GKPPNPK +YHRSC NEWHPQ  +   N+
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136

[Close]

BLAST of CcUC06G125200 vs. ExPASy TrEMBL
Match: A0A5D3DX07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00030 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.7e-46
Identity = 104/150 (69.33%), Postives = 119/150 (79.33%), Query Frame = 0


Query: 1   MTKTRNEHTK-TKRDRARMIAKRFEVKKLSIRQKLGFTEKLEKATKQRMKVFCIRRTLPQ 60
           M KTRN++TK  KRD+AR IAK+F V K          EKLE+A+K+RM+V    RTL +
Sbjct: 1   MAKTRNKNTKMKKRDQARTIAKQFRVLK----------EKLEEASKERMEV----RTLHK 60

Query: 61  IKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNTQ 120
           IKFGISFTIPDRMATEIND+K ISGL PLRITRVPCGGPMEFHEIVKEAEKGSAPLKN +
Sbjct: 61  IKFGISFTIPDRMATEINDKKSISGLRPLRITRVPCGGPMEFHEIVKEAEKGSAPLKNHK 120

Query: 121 QGKPPNPKASYHRSCLNEWHPQTSNLEVNN 150
           +GKPPNPK +YHRSC NEWHPQ  +   N+
Sbjct: 121 KGKPPNPKTAYHRSCFNEWHPQVFHFISNS 136

[Close]

BLAST of CcUC06G125200 vs. ExPASy TrEMBL
Match: A0A2P5F4J0 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.0e-22
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 51  FCIRRTLPQIKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEK 110
           FC  R  P+ KFGISF +PDR+A EI+D+K I G HP+RITR+P GGP EFH +V+EAEK
Sbjct: 3   FCALRAQPK-KFGISFIVPDRLAVEISDKKTIVGKHPMRITRIPLGGPTEFHRVVEEAEK 62

Query: 111 GSAPLKNTQQ---GKPPNPKASYHRSCLNEWHPQ 142
            S PLK   +      PNPK +YHRS +N+WHP+
Sbjct: 63  ESRPLKKYHENVMATGPNPKKAYHRSHMNDWHPK 95

[Close]

BLAST of CcUC06G125200 vs. ExPASy TrEMBL
Match: A0A2P5AKC8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.6e-22
Identity = 54/94 (57.45%), Postives = 68/94 (72.34%), Query Frame = 0


Query: 51  FCIRRTLPQIKFGISFTIPDRMATEINDRKMISGLHPLRITRVPCGGPMEFHEIVKEAEK 110
           FC  R  P+ KFGISF +PDR+A EI+D+K I G HP+RITR+P GGP EFH +V+EAEK
Sbjct: 3   FCALRAQPK-KFGISFIVPDRLAVEISDKKTIVGNHPMRITRIPSGGPTEFHRVVEEAEK 62

Query: 111 GSAPLKNTQQ---GKPPNPKASYHRSCLNEWHPQ 142
            S PLK   +      PNPK +YHRS +N+WHP+
Sbjct: 63  ESRPLKKYNENVMATRPNPKKAYHRSHMNDWHPK 95

The following BLAST results are available for this feature:

BLAST of CcUC06G125200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589576.1	2.4e-51	78.01	hypothetical protein SDJN03_14999, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN63749.1	6.6e-49	72.67	hypothetical protein Csa_013996 [Cucumis sativus]	[more]
KAA0058005.1	9.0e-46	69.33	hypothetical protein E6C27_scaffold274G003090 [Cucumis melo var. makuwa]	[more]
TYK28377.1	1.2e-45	69.33	hypothetical protein E5676_scaffold629G00030 [Cucumis melo var. makuwa]	[more]
PON92695.1	4.1e-22	57.45	hypothetical protein TorRG33x02_115550 [Trema orientale]	[more]

BLAST of CcUC06G125200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G125200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRV9	3.2e-49	72.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014460 PE=4 SV=1	[more]
A0A5A7UWL1	4.3e-46	69.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DX07	5.7e-46	69.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2P5F4J0	2.0e-22	57.45	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_115550 PE=4 SV...	[more]
A0A2P5AKC8	2.6e-22	57.45	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_323790 PE...	[more]

BLAST of CcUC06G125200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G125200.1	CcUC06G125200.1	mRNA