CcUC06G124690 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G124690
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription factor BEE 3-like
Location	CicolChr06: 27165236 .. 27167554 (+)
RNA-Seq Expression	CcUC06G124690
Synteny	CcUC06G124690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACAAACCCTGTAATCCAAATTCAATTCCCTTTCTCTTCTTATTATATATAAATAATCACATCCCTTCAATCCCTTCTTCCATTATCCTAAACCACAGTCACAGTCACAGTCACAGTCGTCTTCTTCTTCTTCTTCTTCCTTTCATTCATGGCTGATCATGATTTCACCTCCTTCCCTCTTGAAGATCCAAATTTAGAGCTCATGGCTTCTCACTTTTCTCCTTCAATTCCCAATTTCACTCACTTCTTACCATTTTCCACTACAACCACCACTACTGATATGTTTTTCCCTTCTCACCAAACCCCACCAAATTTTCCAGAAACTACTAACTTCACTACTTCCCCTGTTTTCCCATCTCACTCTGTTTTTCCACCTGCTCCTTCCTCTGTTTCTACTCATCACTTTCATGATCTCAACAAGAGAAAATCTATGGATGTTTCAGAAAGTACTTCCGGAATTTCAACTCCCCAAGTTTCTGAAACTGGGTTCAAGACTAAATATGTATGTATTTATGTTCCCAATTCTTTTCAAGCATTCATGGTGTTTGTTTAATGGATTTTCCTTTTTTTTTTTTTTTTTTTACAGAGCTCTGGTAAAGGGAAGAGATTGAAAGGTGTTGAGAAAGAAGAGGAGAAATCAACTAGAGAAGTGGTTCATGTTAGAGCTAGAAGAGGCCAAGCCACTGATAGCCACAGCTTGGCTGAAAGGGTAACTATAATTTTTTATAATGTTATTATTAGGAAAATTATAAAGTGGTCAACATCATTTTTTAATTTTCAAAATAAGTATGCTTTTTTAACCGTTGATAAAAAAAATTACATTAAAATGTGTAAAATTAAAAATTAAATTGATTTTGAATAATTAAAGGTATATTTTGGAGTCATTTTGAATATGACAAGAATAATTTTAACAATTTTAATCTAGACTTCCAAATATGTATATAGTTACGTCCATCTTTATGCATCTAAAAAAATTTACTGAATTTTTAACCATTATTCTTATTATTAATATTGGCATAAACTTTCTCCCCTCTTTCTATTGTTAAAAAGAAAAAAAAAAAGAAAAAAAAGAAAAACAAGTTGAAATGGATGATTTTGTAGTGTTGTTTTGGGGAATGAGAAGTTGACATGTAGGAAATAAAAGTCAAAGGGGCAGATTTGAGTGGAAGCAAGCTATTCCTCCATATCCTTCTCTCATCAATCTCTCCAATTCTTTTGCTTCATGTGCCTTTGCCTTCTACAAGAATACCCAAATTAACCTTGTTGCTAATTTCAACTATAATCCAAAGTTTATAATCTAATGTTTGTTTTTAATTTACCTGTAATTTTGATATGATATATACATCTAAGTTAAAGTAATAAAAAGAAATAGATACAACAAGAAACATAGAAAAGAAATAAAATAAAAAAAAAAAAAAAAAAAAAAAATGTAAAGAATCTTGTTCTTTCTTTTCTCTATCTTTCTTTCTTTTTGTGGGTAATTTTAAGAAGAGAAAAAATATATTGAAACTAAATATTCAATGGAATAACAGACCATGGGTATGGCAGTAATGTTGGATGAGATAATTAATTATGTCCAGTCTCTGCAGAATCAAGTGGAGGTGAGTTCTTCAAACTATACATATAAATCAAAATATTCTTTTCGTTTAAGTTTTCTTTTAGAATATATAAATTCCTCTTAATTGTAACAAGACCTTGTTTTTTGAATTTTAGTTCCTCTCCATGAAACTTGCTGCAGCTAGCTCTTTCTATGACTTTAACTCAGAGGCAGATACCATATCAAAATTACAGGTAAATTAAAAACAAACATTAGATTATAAACTTTGGATTATAGTTGAAATTAGCAACAAGGTTAATTTGGGTATTCTTGTAGAAGGCAAAGGCACATGAAGCAAAAGAATTGGAGAGATTGATGAGAGAAGGATATGGAGGAATAGCTTGCTTCCACTCAAATCTGCCCCTTTGACTTTTATTTCCTACATGTCAACTTCTCATTCCCCAAAACAACACTACAAAATCATCCATTTCAACTTGTTTTTCTTTTTTTTCTTTTTTTTTTTCTTTCAAATTTTATAGATAAATTTGGTCCTCAATTAATGATAGTGTACTTAATACAATGGAAATTTATATACTTAAAAAATGAAGCTCATTCCAATGGAAATTCTACCGTATGGAGTCACTAGTGTTAAAGAAAAAAAGATGTGTACATTCCATAATATAAGTTGTACAAACATCAATACCAACCCTAGAAATTATTATTTATATTTTGTATAATAATTATTTTTACTTTCTTCAAATTATAAGAAGATTGGAGGGG

mRNA sequence

CTTACAAACCCTGTAATCCAAATTCAATTCCCTTTCTCTTCTTATTATATATAAATAATCACATCCCTTCAATCCCTTCTTCCATTATCCTAAACCACAGTCACAGTCACAGTCACAGTCGTCTTCTTCTTCTTCTTCTTCCTTTCATTCATGGCTGATCATGATTTCACCTCCTTCCCTCTTGAAGATCCAAATTTAGAGCTCATGGCTTCTCACTTTTCTCCTTCAATTCCCAATTTCACTCACTTCTTACCATTTTCCACTACAACCACCACTACTGATATGTTTTTCCCTTCTCACCAAACCCCACCAAATTTTCCAGAAACTACTAACTTCACTACTTCCCCTGTTTTCCCATCTCACTCTGTTTTTCCACCTGCTCCTTCCTCTGTTTCTACTCATCACTTTCATGATCTCAACAAGAGAAAATCTATGGATGTTTCAGAAAGTACTTCCGGAATTTCAACTCCCCAAGTTTCTGAAACTGGGTTCAAGACTAAATATAGCTCTGGTAAAGGGAAGAGATTGAAAGGTGTTGAGAAAGAAGAGGAGAAATCAACTAGAGAAGTGGTTCATTTCCTCTCCATGAAACTTGCTGCAGCTAGCTCTTTCTATGACTTTAACTCAGAGGCAGATACCATATCAAAATTACAGAAGGCAAAGGCACATGAAGCAAAAGAATTGGAGAGATTGATGAGAGAAGGATATGGAGGAATAGCTTGCTTCCACTCAAATCTGCCCCTTTGACTTTTATTTCCTACATGTCAACTTCTCATTCCCCAAAACAACACTACAAAATCATCCATTTCAACTTGTTTTTCTTTTTTTTCTTTTTTTTTTTCTTTCAAATTTTATAGATAAATTTGGTCCTCAATTAATGATAGTGTACTTAATACAATGGAAATTTATATACTTAAAAAATGAAGCTCATTCCAATGGAAATTCTACCGTATGGAGTCACTAGTGTTAAAGAAAAAAAGATGTGTACATTCCATAATATAAGTTGTACAAACATCAATACCAACCCTAGAAATTATTATTTATATTTTGTATAATAATTATTTTTACTTTCTTCAAATTATAAGAAGATTGGAGGGG

Coding sequence (CDS)

ATGGCTGATCATGATTTCACCTCCTTCCCTCTTGAAGATCCAAATTTAGAGCTCATGGCTTCTCACTTTTCTCCTTCAATTCCCAATTTCACTCACTTCTTACCATTTTCCACTACAACCACCACTACTGATATGTTTTTCCCTTCTCACCAAACCCCACCAAATTTTCCAGAAACTACTAACTTCACTACTTCCCCTGTTTTCCCATCTCACTCTGTTTTTCCACCTGCTCCTTCCTCTGTTTCTACTCATCACTTTCATGATCTCAACAAGAGAAAATCTATGGATGTTTCAGAAAGTACTTCCGGAATTTCAACTCCCCAAGTTTCTGAAACTGGGTTCAAGACTAAATATAGCTCTGGTAAAGGGAAGAGATTGAAAGGTGTTGAGAAAGAAGAGGAGAAATCAACTAGAGAAGTGGTTCATTTCCTCTCCATGAAACTTGCTGCAGCTAGCTCTTTCTATGACTTTAACTCAGAGGCAGATACCATATCAAAATTACAGAAGGCAAAGGCACATGAAGCAAAAGAATTGGAGAGATTGATGAGAGAAGGATATGGAGGAATAGCTTGCTTCCACTCAAATCTGCCCCTTTGA

Protein sequence

MADHDFTSFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPETTNFTTSPVFPSHSVFPPAPSSVSTHHFHDLNKRKSMDVSESTSGISTPQVSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVHFLSMKLAAASSFYDFNSEADTISKLQKAKAHEAKELERLMREGYGGIACFHSNLPL

Homology

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BLAST of CcUC06G124690 vs. NCBI nr
Match: XP_038902501.1 (transcription factor BEE 3-like isoform X1 [Benincasa hispida])

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 182/265 (68.68%), Postives = 188/265 (70.94%), Query Frame = 0


Query: 1   MADHDFT-SFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPET 60
           MAD DFT SFPLEDPNLELMASHFSPSIPNFTHFLPFS TTTTTDMFFPSHQTP NFPET
Sbjct: 1   MADLDFTSSFPLEDPNLELMASHFSPSIPNFTHFLPFSATTTTTDMFFPSHQTPTNFPET 60

Query: 61  TNFTTSPVFPSHSVFPP---APS-SVSTHHFHDLNKRKSMDVSESTSGISTPQVSETGFK 120
           T+FTTSPV PSHSV       PS SVSTHHFHD+NKRKSMDVSESTSGISTPQVSETGFK
Sbjct: 61  TSFTTSPVLPSHSVLQSHSVLPSHSVSTHHFHDINKRKSMDVSESTSGISTPQVSETGFK 120

Query: 121 TKYSSGKGKRLKGVEKEEEKSTREVVH--------------------------------- 180
           TKYSSGKGKRLK +EKEEEKSTREVVH                                 
Sbjct: 121 TKYSSGKGKRLKSIEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDI 180

Query: 181 -----------------------------FLSMKLAAASSFYDFNSEADTISKLQKAKAH 199
                                        FLSMKLAAASSFYDFNSEAD ISKLQ+AKAH
Sbjct: 181 VPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKAH 240

[Close]

BLAST of CcUC06G124690 vs. NCBI nr
Match: XP_008453408.1 (PREDICTED: transcription factor BEE 3-like [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 9.1e-72
Identity = 174/272 (63.97%), Postives = 185/272 (68.01%), Query Frame = 0


Query: 1   MADHDFT-SFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPE- 60
           MADHDFT SFPLEDPNLELMASHFSPSIPNFTHFLPFS  TT T++F  S   PPNFPE 
Sbjct: 1   MADHDFTSSFPLEDPNLELMASHFSPSIPNFTHFLPFS--TTNTEIF--SQFIPPNFPEN 60

Query: 61  --TTNFTTSPVFPSHSVF-PPAPS---SVSTHHFHDLN--KRKS--MDVSESTSGISTPQ 120
             T++FTTSPV PSHSVF PPAP+   S +THHFHD+N  KRKS  MDVSESTSGISTPQ
Sbjct: 61  NATSSFTTSPVLPSHSVFGPPAPTPSVSTTTHHFHDINNHKRKSMPMDVSESTSGISTPQ 120

Query: 121 VSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVH-------------------------- 180
           VSE+GF TKYSSGKGKRLK +EKEEEKSTREVVH                          
Sbjct: 121 VSESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINER 180

Query: 181 ------------------------------------FLSMKLAAASSFYDFNSEADTISK 199
                                               FLSMKLAAASSFYDFNSEAD ISK
Sbjct: 181 LRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISK 240

[Close]

BLAST of CcUC06G124690 vs. NCBI nr
Match: XP_004137542.1 (transcription factor BEE 3 [Cucumis sativus] >KAE8652462.1 hypothetical protein Csa_013397 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 2.0e-71
Identity = 174/270 (64.44%), Postives = 184/270 (68.15%), Query Frame = 0


Query: 1   MADHDF-TSFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPE- 60
           MADHDF +SFPLEDPNLELMASHFS SIPNFTHFLPFS  TT T++F    Q PPNFPE 
Sbjct: 1   MADHDFPSSFPLEDPNLELMASHFSSSIPNFTHFLPFS--TTNTEIF---SQFPPNFPEN 60

Query: 61  -TTNFTTSPVFPSHSVFPPAPS-SVST---HHFHDL-NKRKS--MDVSESTSGISTPQVS 120
             T+FTTSPV PSHSVFPPAP+ SVST   HHFHD+ NKRKS  MDVSESTSGISTPQVS
Sbjct: 61  NATSFTTSPVLPSHSVFPPAPTPSVSTTTHHHFHDINNKRKSMPMDVSESTSGISTPQVS 120

Query: 121 ETGFKTKYSSGKGKRLKGVEKEEEKSTREVVH---------------------------- 180
           E+GF TKYSSGKGKRLK +EKEEEKSTREVVH                            
Sbjct: 121 ESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLR 180

Query: 181 ----------------------------------FLSMKLAAASSFYDFNSEADTISKLQ 199
                                             FLSMKLAAASSFYDFNSEAD ISKLQ
Sbjct: 181 CLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQ 240

[Close]

BLAST of CcUC06G124690 vs. NCBI nr
Match: XP_038902504.1 (transcription factor BEE 3-like isoform X2 [Benincasa hispida])

HSP 1 Score: 241.1 bits (614), Expect = 8.0e-60
Identity = 132/158 (83.54%), Postives = 137/158 (86.71%), Query Frame = 0


Query: 1   MADHDFT-SFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPET 60
           MAD DFT SFPLEDPNLELMASHFSPSIPNFTHFLPFS TTTTTDMFFPSHQTP NFPET
Sbjct: 1   MADLDFTSSFPLEDPNLELMASHFSPSIPNFTHFLPFSATTTTTDMFFPSHQTPTNFPET 60

Query: 61  TNFTTSPVFPSHSVFPP---APS-SVSTHHFHDLNKRKSMDVSESTSGISTPQVSETGFK 120
           T+FTTSPV PSHSV       PS SVSTHHFHD+NKRKSMDVSESTSGISTPQVSETGFK
Sbjct: 61  TSFTTSPVLPSHSVLQSHSVLPSHSVSTHHFHDINKRKSMDVSESTSGISTPQVSETGFK 120

Query: 121 TKYSSGKGKRLKGVEKEEEKSTREVVHFLSMKLAAASS 154
           TKYSSGKGKRLK +EKEEEKSTREVVH  + +  A  S
Sbjct: 121 TKYSSGKGKRLKSIEKEEEKSTREVVHVRARRGQATDS 158

[Close]

BLAST of CcUC06G124690 vs. NCBI nr
Match: KAA0058084.1 (transcription factor BEE 3-like [Cucumis melo var. makuwa] >TYK28437.1 transcription factor BEE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 204.5 bits (519), Expect = 8.3e-49
Identity = 123/165 (74.55%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 1   MADHDFT-SFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPE- 60
           MADHDFT SFPLEDPNLELMASHFSPSIPNFTHFLPFS  TT T++F  S   PPNFPE 
Sbjct: 1   MADHDFTSSFPLEDPNLELMASHFSPSIPNFTHFLPFS--TTNTEIF--SQFIPPNFPEN 60

Query: 61  --TTNFTTSPVFPSHSVF-PPAPS---SVSTHHFHDLN--KRKS--MDVSESTSGISTPQ 120
             T++FTTSPV PSHSVF PPAP+   S +THHFHD+N  KRKS  MDVSESTSGISTPQ
Sbjct: 61  NATSSFTTSPVLPSHSVFGPPAPTPSVSTTTHHFHDINNHKRKSMPMDVSESTSGISTPQ 120

Query: 121 VSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVHFLSMKLAAASS 154
           VSE+GF TKYSSGKGKRLK +EKEEEKSTREVVH  + +  A  S
Sbjct: 121 VSESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDS 161

[Close]

BLAST of CcUC06G124690 vs. ExPASy Swiss-Prot
Match: Q8GWK7 (Transcription factor BEE 3 OS=Arabidopsis thaliana OX=3702 GN=BEE3 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 135 KSTREVVHFLSMKLAAASSFYDFNSEADTISKLQKAKAHEAKELERLMREGYGGIACFHS 194
           +S +  V FLSMKL AASS+YDFNSE D +  +QKAKA EA E    M +G  G + FHS
Sbjct: 201 QSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVE----MGQGRDGSSVFHS 257

Query: 195 N 196
           +
Sbjct: 261 S 257

[Close]

BLAST of CcUC06G124690 vs. ExPASy Swiss-Prot
Match: Q8GZ13 (Transcription factor BEE 1 OS=Arabidopsis thaliana OX=3702 GN=BEE1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.0e-06
Identity = 62/225 (27.56%), Postives = 91/225 (40.44%), Query Frame = 0


Query: 32  HFLPFSTTTTTTDMFFPSHQT------PPNFPETTN---FTTSPVFPSHSVFPPAPSSVS 91
           HF  F  ++T+ +  F  H        P N P+++N    T+S +   H++        +
Sbjct: 36  HFQTFHPSSTSLESLFLHHHQQQLLHFPGNSPDSSNNFSSTSSFLHSDHNIVDETKKRKA 95

Query: 92  THHFHDLNKRKSMDVSESTSGISTPQVSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVH 151
                 L+  ++  VS++T+ I+T    ETG     S  +GKRLK  ++EE++  REVVH
Sbjct: 96  L--LPTLSSSETSGVSDNTNVIAT----ETG-----SLRRGKRLKKKKEEEDEKEREVVH 155

Query: 152 ------------------------------------------------------------ 186
                                                                       
Sbjct: 156 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 215

[Close]

BLAST of CcUC06G124690 vs. ExPASy TrEMBL
Match: A0A1S3BW65 (transcription factor BEE 3-like OS=Cucumis melo OX=3656 GN=LOC103494130 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.4e-72
Identity = 174/272 (63.97%), Postives = 185/272 (68.01%), Query Frame = 0


Query: 1   MADHDFT-SFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPE- 60
           MADHDFT SFPLEDPNLELMASHFSPSIPNFTHFLPFS  TT T++F  S   PPNFPE 
Sbjct: 1   MADHDFTSSFPLEDPNLELMASHFSPSIPNFTHFLPFS--TTNTEIF--SQFIPPNFPEN 60

Query: 61  --TTNFTTSPVFPSHSVF-PPAPS---SVSTHHFHDLN--KRKS--MDVSESTSGISTPQ 120
             T++FTTSPV PSHSVF PPAP+   S +THHFHD+N  KRKS  MDVSESTSGISTPQ
Sbjct: 61  NATSSFTTSPVLPSHSVFGPPAPTPSVSTTTHHFHDINNHKRKSMPMDVSESTSGISTPQ 120

Query: 121 VSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVH-------------------------- 180
           VSE+GF TKYSSGKGKRLK +EKEEEKSTREVVH                          
Sbjct: 121 VSESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINER 180

Query: 181 ------------------------------------FLSMKLAAASSFYDFNSEADTISK 199
                                               FLSMKLAAASSFYDFNSEAD ISK
Sbjct: 181 LRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISK 240

[Close]

BLAST of CcUC06G124690 vs. ExPASy TrEMBL
Match: A0A0A0LS36 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024150 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.8e-72
Identity = 174/270 (64.44%), Postives = 184/270 (68.15%), Query Frame = 0


Query: 1   MADHDF-TSFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPE- 60
           MADHDF +SFPLEDPNLELMASHFS SIPNFTHFLPFS  TT T++F    Q PPNFPE 
Sbjct: 217 MADHDFPSSFPLEDPNLELMASHFSSSIPNFTHFLPFS--TTNTEIF---SQFPPNFPEN 276

Query: 61  -TTNFTTSPVFPSHSVFPPAPS-SVST---HHFHDL-NKRKS--MDVSESTSGISTPQVS 120
             T+FTTSPV PSHSVFPPAP+ SVST   HHFHD+ NKRKS  MDVSESTSGISTPQVS
Sbjct: 277 NATSFTTSPVLPSHSVFPPAPTPSVSTTTHHHFHDINNKRKSMPMDVSESTSGISTPQVS 336

Query: 121 ETGFKTKYSSGKGKRLKGVEKEEEKSTREVVH---------------------------- 180
           E+GF TKYSSGKGKRLK +EKEEEKSTREVVH                            
Sbjct: 337 ESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLR 396

Query: 181 ----------------------------------FLSMKLAAASSFYDFNSEADTISKLQ 199
                                             FLSMKLAAASSFYDFNSEAD ISKLQ
Sbjct: 397 CLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQ 456

[Close]

BLAST of CcUC06G124690 vs. ExPASy TrEMBL
Match: A0A5A7USE0 (Transcription factor BEE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00690 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 4.0e-49
Identity = 123/165 (74.55%), Postives = 134/165 (81.21%), Query Frame = 0


Query: 1   MADHDFT-SFPLEDPNLELMASHFSPSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFPE- 60
           MADHDFT SFPLEDPNLELMASHFSPSIPNFTHFLPFS  TT T++F  S   PPNFPE 
Sbjct: 1   MADHDFTSSFPLEDPNLELMASHFSPSIPNFTHFLPFS--TTNTEIF--SQFIPPNFPEN 60

Query: 61  --TTNFTTSPVFPSHSVF-PPAPS---SVSTHHFHDLN--KRKS--MDVSESTSGISTPQ 120
             T++FTTSPV PSHSVF PPAP+   S +THHFHD+N  KRKS  MDVSESTSGISTPQ
Sbjct: 61  NATSSFTTSPVLPSHSVFGPPAPTPSVSTTTHHFHDINNHKRKSMPMDVSESTSGISTPQ 120

Query: 121 VSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVHFLSMKLAAASS 154
           VSE+GF TKYSSGKGKRLK +EKEEEKSTREVVH  + +  A  S
Sbjct: 121 VSESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDS 161

[Close]

BLAST of CcUC06G124690 vs. ExPASy TrEMBL
Match: A0A6J1C0H1 (transcription factor BEE 3 OS=Momordica charantia OX=3673 GN=LOC111007217 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 4.8e-42
Identity = 133/261 (50.96%), Postives = 142/261 (54.41%), Query Frame = 0


Query: 8   SFP-LEDPNLELMASHFSPSIP-----NFTHFLPFSTTTTTTDMFFPSHQTPPNFPETTN 67
           SFP   DPNLELM  H+S S P     NF + LPFS      DMFFP HQ PP      N
Sbjct: 17  SFPDFMDPNLELM-GHYSASNPAPPSLNFNNLLPFS-----NDMFFP-HQPPPELLH-GN 76

Query: 68  FTTSPVFPSHSVFPPAPSSVSTHHFHDLNKRK-SMDVSESTSGISTPQVSETGFKTKYSS 127
           F   P        PP  S+     FHDL KRK SM+ SESTSGISTPQ SE GFK+K SS
Sbjct: 77  FPLPP--------PPPISAPQNESFHDLKKRKSSMEFSESTSGISTPQASENGFKSKNSS 136

Query: 128 GKGKRLKGVEKEEEKSTREVVH-------------------------------------- 187
           G+GKRLK VEKEEEKS REVVH                                      
Sbjct: 137 GRGKRLKSVEKEEEKSAREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCY 196

Query: 188 ------------------------FLSMKLAAASSFYDFNSEADTISKLQKAKAHEAKEL 199
                                   FLSMKLAAASSFYDFNSEAD ISKLQ+AKA+EAKEL
Sbjct: 197 KTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKANEAKEL 256

[Close]

BLAST of CcUC06G124690 vs. ExPASy TrEMBL
Match: A0A6J1E0N6 (transcription factor BEE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429752 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 2.4e-41
Identity = 128/261 (49.04%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 11  LEDPNLELMASHFS---PSIPNFTHFLPFSTTTTTTDMFFPSHQTPPNFP------ETTN 70
           ++DP+L L+   +S      PNFT+F PFS      D FFP HQ PP FP       T++
Sbjct: 17  MDDPSLHLLPPPYSVPPNPPPNFTNFFPFS-----GDPFFP-HQPPPQFPPPNPPEPTSS 76

Query: 71  FTTSPVFPSHSVFPPAPSSVSTHHFHDLNKRKSMDVSESTSGISTPQVSETGFKTKYSSG 130
           F   P+FPS +  PP P S     FHD+ KRKSMDVSES+SGISTPQ+SETGF TK +S 
Sbjct: 77  F---PLFPSQTA-PPPPLS----EFHDIKKRKSMDVSESSSGISTPQLSETGFNTKQNSR 136

Query: 131 KGKRLKGVE-KEEEKSTREVVH-------------------------------------- 190
           KGKRLK  E +EEEKS REVVH                                      
Sbjct: 137 KGKRLKRTEIEEEEKSRREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCY 196

Query: 191 ------------------------FLSMKLAAASSFYDFNSEADTISKLQKAKAHEAK-E 199
                                   FLSMKLAAASS YDFNSE D ISKLQ+AKAHEAK E
Sbjct: 197 KTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSLYDFNSEVDAISKLQRAKAHEAKEE 256

[Close]

BLAST of CcUC06G124690 vs. TAIR 10
Match: AT1G73830.1 (BR enhanced expression 3 )

HSP 1 Score: 61.6 bits (148), Expect = 8.1e-10
Identity = 33/61 (54.10%), Postives = 41/61 (67.21%), Query Frame = 0


Query: 135 KSTREVVHFLSMKLAAASSFYDFNSEADTISKLQKAKAHEAKELERLMREGYGGIACFHS 194
           +S +  V FLSMKL AASS+YDFNSE D +  +QKAKA EA E    M +G  G + FHS
Sbjct: 201 QSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQKAKAREAVE----MGQGRDGSSVFHS 257

Query: 195 N 196
           +
Sbjct: 261 S 257

[Close]

BLAST of CcUC06G124690 vs. TAIR 10
Match: AT1G73830.2 (BR enhanced expression 3 )

HSP 1 Score: 55.1 bits (131), Expect = 7.6e-08
Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 135 KSTREVVHFLSMKLAAASSFYDFNSEADTISKLQKAKAHEAKELERLMREGYGGIACFHS 194
           +S +  V FLSMKL AASS+YDFNSE D +  +Q AKA EA E    M +G  G + FHS
Sbjct: 201 QSLQNQVEFLSMKLTAASSYYDFNSETDAVESMQ-AKAREAVE----MGQGRDGSSVFHS 256

Query: 195 N 196
           +
Sbjct: 261 S 256

[Close]

BLAST of CcUC06G124690 vs. TAIR 10
Match: AT1G18400.1 (BR enhanced expression 1 )

HSP 1 Score: 52.0 bits (123), Expect = 6.4e-07
Identity = 62/225 (27.56%), Postives = 91/225 (40.44%), Query Frame = 0


Query: 32  HFLPFSTTTTTTDMFFPSHQT------PPNFPETTN---FTTSPVFPSHSVFPPAPSSVS 91
           HF  F  ++T+ +  F  H        P N P+++N    T+S +   H++        +
Sbjct: 36  HFQTFHPSSTSLESLFLHHHQQQLLHFPGNSPDSSNNFSSTSSFLHSDHNIVDETKKRKA 95

Query: 92  THHFHDLNKRKSMDVSESTSGISTPQVSETGFKTKYSSGKGKRLKGVEKEEEKSTREVVH 151
                 L+  ++  VS++T+ I+T    ETG     S  +GKRLK  ++EE++  REVVH
Sbjct: 96  L--LPTLSSSETSGVSDNTNVIAT----ETG-----SLRRGKRLKKKKEEEDEKEREVVH 155

Query: 152 ------------------------------------------------------------ 186
                                                                       
Sbjct: 156 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 215

[Close]

BLAST of CcUC06G124690 vs. TAIR 10
Match: AT1G25330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 43.5 bits (101), Expect = 2.3e-04
Identity = 23/54 (42.59%), Postives = 33/54 (61.11%), Query Frame = 0


Query: 135 KSTREVVHFLSMKLAAASSFYDFNS-EADTISKLQKAKAHEAKELERLMREGYG 188
           +S +  + FLSMKL+AAS+ YD NS + +     Q    H A E+ER++RE  G
Sbjct: 158 RSLQNQIEFLSMKLSAASACYDLNSLDIEPTDIFQGGNIHSAAEMERILRESVG 211

The following BLAST results are available for this feature:

BLAST of CcUC06G124690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902501.1	2.0e-82	68.68	transcription factor BEE 3-like isoform X1 [Benincasa hispida]	[more]
XP_008453408.1	9.1e-72	63.97	PREDICTED: transcription factor BEE 3-like [Cucumis melo]	[more]
XP_004137542.1	2.0e-71	64.44	transcription factor BEE 3 [Cucumis sativus] >KAE8652462.1 hypothetical protein ...	[more]
XP_038902504.1	8.0e-60	83.54	transcription factor BEE 3-like isoform X2 [Benincasa hispida]	[more]
KAA0058084.1	8.3e-49	74.55	transcription factor BEE 3-like [Cucumis melo var. makuwa] >TYK28437.1 transcrip...	[more]

BLAST of CcUC06G124690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWK7	1.1e-08	54.10	Transcription factor BEE 3 OS=Arabidopsis thaliana OX=3702 GN=BEE3 PE=2 SV=1	[more]
Q8GZ13	9.0e-06	27.56	Transcription factor BEE 1 OS=Arabidopsis thaliana OX=3702 GN=BEE1 PE=1 SV=1	[more]

BLAST of CcUC06G124690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BW65	4.4e-72	63.97	transcription factor BEE 3-like OS=Cucumis melo OX=3656 GN=LOC103494130 PE=4 SV=...	[more]
A0A0A0LS36	9.8e-72	64.44	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G024150 PE=4 S...	[more]
A0A5A7USE0	4.0e-49	74.55	Transcription factor BEE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1C0H1	4.8e-42	50.96	transcription factor BEE 3 OS=Momordica charantia OX=3673 GN=LOC111007217 PE=4 S...	[more]
A0A6J1E0N6	2.4e-41	49.04	transcription factor BEE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111429752 PE...	[more]

BLAST of CcUC06G124690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73830.1	8.1e-10	54.10	BR enhanced expression 3	[more]
AT1G73830.2	7.6e-08	52.46	BR enhanced expression 3	[more]
AT1G18400.1	6.4e-07	27.56	BR enhanced expression 1	[more]
AT1G25330.1	2.3e-04	42.59	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 164..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..117
None	No IPR available	PANTHER	PTHR12565:SF340	TRANSCRIPTION FACTOR BEE 1	coord: 6..142
None	No IPR available	PANTHER	PTHR12565:SF340	TRANSCRIPTION FACTOR BEE 1	coord: 141..197
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 6..142
IPR024097	Basic helix-loop-helix leucine zipper transcription factor	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 141..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G124690.1	CcUC06G124690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity