CcUC06G124150 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGAATTCAGCTTCTTGTGCTCCGTCAATGGCCTCCAATGGCGCCGCAAAGGTTTTATCCTTAGACGGAAAATTACAGAGCTTCGCGAAGCCAGTGAAGGCCGCGGAACTAATGATCGAGCATTCTGGCAAATTCCTCTGCGATTCCAGCGATCTCAAAGTCGGCCATCGGATTCAAGGTCTTCTACCGGACGAAGATCTCGAATGGCGGCGATTGTACTTTCTACTTCCGATGGATCTTCTCTACTCTGTTCTAACTCTCGAAGAAATGAGTTCTCTGACTTTCATTGCTACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGTAGGATTTTTCCTGTTTTGATGAGTGAACTCTGTATTTCTCCGGCGGATGTGAATCGATTGAAATTGGAAGACGGCGATCGAGAAAATCAAAGTTCAAAGGCGGTGCAGAGATTGATTTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATCGCTGAAACTTCGTGCACATAG ATGGGGAATTCAGCTTCTTGTGCTCCGTCAATGGCCTCCAATGGCGCCGCAAAGGTTTTATCCTTAGACGGAAAATTACAGAGCTTCGCGAAGCCAGTGAAGGCCGCGGAACTAATGATCGAGCATTCTGGCAAATTCCTCTGCGATTCCAGCGATCTCAAAGTCGGCCATCGGATTCAAGGTCTTCTACCGGACGAAGATCTCGAATGGCGGCGATTGTACTTTCTACTTCCGATGGATCTTCTCTACTCTGTTCTAACTCTCGAAGAAATGAGTTCTCTGACTTTCATTGCTACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGTAGGATTTTTCCTGTTTTGATGAGTGAACTCTGTATTTCTCCGGCGGATGTGAATCGATTGAAATTGGAAGACGGCGATCGAGAAAATCAAAGTTCAAAGGCGGTGCAGAGATTGATTTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATCGCTGAAACTTCGTGCACATAG ATGGGGAATTCAGCTTCTTGTGCTCCGTCAATGGCCTCCAATGGCGCCGCAAAGGTTTTATCCTTAGACGGAAAATTACAGAGCTTCGCGAAGCCAGTGAAGGCCGCGGAACTAATGATCGAGCATTCTGGCAAATTCCTCTGCGATTCCAGCGATCTCAAAGTCGGCCATCGGATTCAAGGTCTTCTACCGGACGAAGATCTCGAATGGCGGCGATTGTACTTTCTACTTCCGATGGATCTTCTCTACTCTGTTCTAACTCTCGAAGAAATGAGTTCTCTGACTTTCATTGCTACAAAGGCTCTGAAACATGGAAATTCGAGTGGATTTGGTAGGATTTTTCCTGTTTTGATGAGTGAACTCTGTATTTCTCCGGCGGATGTGAATCGATTGAAATTGGAAGACGGCGATCGAGAAAATCAAAGTTCAAAGGCGGTGCAGAGATTGATTTCGAAACAGAGATCGTGGAAGCCGGCGCTCGAAACCATCGCTGAAACTTCGTGCACATAG MGNSASCAPSMASNGAAKVLSLDGKLQSFAKPVKAAELMIEHSGKFLCDSSDLKVGHRIQGLLPDEDLEWRRLYFLLPMDLLYSVLTLEEMSSLTFIATKALKHGNSSGFGRIFPVLMSELCISPADVNRLKLEDGDRENQSSKAVQRLISKQRSWKPALETIAETSCT Homology
BLAST of CcUC06G124150 vs. NCBI nr
Match: XP_038879989.1 (uncharacterized protein LOC120071684 [Benincasa hispida]) HSP 1 Score: 317.4 bits (812), Expect = 7.5e-83 Identity = 160/169 (94.67%), Postives = 167/169 (98.82%), Query Frame = 0
BLAST of CcUC06G124150 vs. NCBI nr
Match: XP_008453692.1 (PREDICTED: uncharacterized protein LOC103494340 [Cucumis melo] >KAA0058149.1 DUF4228 domain protein [Cucumis melo var. makuwa] >TYK29749.1 DUF4228 domain protein [Cucumis melo var. makuwa]) HSP 1 Score: 300.4 bits (768), Expect = 9.5e-78 Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of CcUC06G124150 vs. NCBI nr
Match: XP_004137354.1 (uncharacterized protein LOC101203132 [Cucumis sativus]) HSP 1 Score: 299.7 bits (766), Expect = 1.6e-77 Identity = 156/170 (91.76%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of CcUC06G124150 vs. NCBI nr
Match: XP_022921761.1 (uncharacterized protein LOC111429917 [Cucurbita moschata]) HSP 1 Score: 292.0 bits (746), Expect = 3.4e-75 Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of CcUC06G124150 vs. NCBI nr
Match: KAG7023330.1 (hypothetical protein SDJN02_14355, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 291.2 bits (744), Expect = 5.8e-75 Identity = 148/168 (88.10%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of CcUC06G124150 vs. ExPASy TrEMBL
Match: A0A5D3E1W3 (DUF4228 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46571G00010 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 4.6e-78 Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of CcUC06G124150 vs. ExPASy TrEMBL
Match: A0A1S3BY23 (uncharacterized protein LOC103494340 OS=Cucumis melo OX=3656 GN=LOC103494340 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 4.6e-78 Identity = 155/169 (91.72%), Postives = 159/169 (94.08%), Query Frame = 0
BLAST of CcUC06G124150 vs. ExPASy TrEMBL
Match: A0A0A0LSX3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025190 PE=4 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 7.8e-78 Identity = 156/170 (91.76%), Postives = 161/170 (94.71%), Query Frame = 0
BLAST of CcUC06G124150 vs. ExPASy TrEMBL
Match: A0A6J1E2A0 (uncharacterized protein LOC111429917 OS=Cucurbita moschata OX=3662 GN=LOC111429917 PE=4 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75 Identity = 148/168 (88.10%), Postives = 159/168 (94.64%), Query Frame = 0
BLAST of CcUC06G124150 vs. ExPASy TrEMBL
Match: A0A6J1JH13 (uncharacterized protein LOC111485040 OS=Cucurbita maxima OX=3661 GN=LOC111485040 PE=4 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 8.1e-75 Identity = 148/168 (88.10%), Postives = 158/168 (94.05%), Query Frame = 0
BLAST of CcUC06G124150 vs. TAIR 10
Match: AT1G18290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: root; Has 94 Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 110.2 bits (274), Expect = 1.7e-24 Identity = 71/178 (39.89%), Postives = 106/178 (59.55%), Query Frame = 0
BLAST of CcUC06G124150 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 1.6e-11 Identity = 41/134 (30.60%), Postives = 71/134 (52.99%), Query Frame = 0
BLAST of CcUC06G124150 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 4.8e-11 Identity = 62/186 (33.33%), Postives = 92/186 (49.46%), Query Frame = 0
BLAST of CcUC06G124150 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-10 Identity = 60/171 (35.09%), Postives = 83/171 (48.54%), Query Frame = 0
BLAST of CcUC06G124150 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 31/95 (32.63%), Postives = 55/95 (57.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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