CcUC06G123850 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTAAGTCATTAATTACTTCTTTTTTAACTCACAAAACTCAATAATTAACTGATTATTTCAACTTGAAACTTCTCTCTCTTTCTTTACCAATTCTTTTCTCTTAATATCCCCCACTTACCCCTTCTCTTCTTCCCCAAGACTGCCATGGGAGATCATCAAGATGAGGTATGCAATATCAGCTGGCTTAGCCTTGGTTTGGGATTTGGTGAATATGTCCCAAAAAAGATGCAAAAAATCAACAATAAGCAGCAGCAGCAGCAACAACAACAACAACAATTCTCTTTCACTCTCATTCCAAAAGAAGAATTGGGTATTAACAATAACGACGACGACAACAACAACATCAATATGGAAATTGACTATGAAGCTAATTCAAGTGAAGAAGATGATCATCATTTGATGAAGAGAATTAGAAGCAATAATAATATTGTTAATTATGATCAAGATTCCTCCTTTGGAATTAGAAGATCATCATCAGATCATCATCATCAGTACAACAACAACAACAAAAATATTATTACTACTAATCATAATTATAAGGGGATTAGTAGTAGTAGTGGATCAGAATTAACGGAGAGAAAAAAGCTTAGGCTTTCCAAAGAACAATCCACTTTGCTGGAAGAAAGCTTCAAACTTCACACCACTTTGAATCCGGTAAGCTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATACCCATTTAATCTTTTTTCCTTCTTTTCATTTTTATCAAATACCCATCAATTCTTTTATGAAAAAATTTAATCTTTTTTTTTTTCTATTTTTTTTTCTTTTTGCATGGATTTGTAGGCTCAGAAACAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGTATTTTTACAATTCTTTTAACATTATATATCTTCCTTTTTGTTTTTTCTTTTTCCCTTAAAAAAACGGTTTTTAGTTTTCTATTTTTGAAAATTATCCGTTTATTTATTTTATTACCCTACTTCTTTTAGAATGTTATTAAATACTGTTATGAATTTAAAGAAAAACAAAAATTTATTGTAAAGAAATTGTGAGTTTATCATAAAAAAATGGCGAGAGAAGAACGCAATTTTCAAAAACTTAAGTTTTTTAATAACCCTTTTGTTTTTAATCTTCTATTTTTGAAATTTATGATTGCTTTATCCTAATTTCTTTAACATGAGTTTATTTTATTTTATTTTTTAAAGAAAATTCTTAGTAAAATCTAAAAAATTTGCTTGATATTTTAAAAAGATTAGTGGAAAGTGGGAAAACAAAAGGTTTTAAATTAAGAGAGGAGATCTTAATTTTGATCTAGAATTGGTAAAATATTTGTCGTTTGATTAATTTGTTACTAAATATTGAAATTTGTTTTTAACAATGGGTGTATATAGAAAGTTAAAAAGTGAAAAATTGACTTGTGGAACAGGACGAAATTGAAACAAACAGAAGTAGATTGTGAGTTTTTGAAGAAATGTTGTGAAAGATTAAACGAAGAAAACCGAAGGTTGAAGAAAGAATTGCATGAATTAAGATCCCTTAAACTTGGAGCTTCACAATTGTACATTCAGCTGCCCAAGGCGGGCACACTCACAATTTGCCCTTCATGCGACAAAATTACAAGGACGGCCGCCGCCAACGCCGCCGCCGTCGACGGCTAATTCTCCGCCACAATAATTTAATAATGCCCTTTTTCTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTCCCGGCTGTGTGTTTTGGTACAGCAAAAAAGAATAATTAAATTCAATAACAATACAGCCTTTTTTAGATTTTACATCAAATCATCTTAAATTAAACTATGTTATGAAAAAAATCAGAG TTTTTTTTTTAAGTCATTAATTACTTCTTTTTTAACTCACAAAACTCAATAATTAACTGATTATTTCAACTTGAAACTTCTCTCTCTTTCTTTACCAATTCTTTTCTCTTAATATCCCCCACTTACCCCTTCTCTTCTTCCCCAAGACTGCCATGGGAGATCATCAAGATGAGGTATGCAATATCAGCTGGCTTAGCCTTGGTTTGGGATTTGGTGAATATGTCCCAAAAAAGATGCAAAAAATCAACAATAAGCAGCAGCAGCAGCAACAACAACAACAACAATTCTCTTTCACTCTCATTCCAAAAGAAGAATTGGGTATTAACAATAACGACGACGACAACAACAACATCAATATGGAAATTGACTATGAAGCTAATTCAAGTGAAGAAGATGATCATCATTTGATGAAGAGAATTAGAAGCAATAATAATATTGTTAATTATGATCAAGATTCCTCCTTTGGAATTAGAAGATCATCATCAGATCATCATCATCAGTACAACAACAACAACAAAAATATTATTACTACTAATCATAATTATAAGGGGATTAGTAGTAGTAGTGGATCAGAATTAACGGAGAGAAAAAAGCTTAGGCTTTCCAAAGAACAATCCACTTTGCTGGAAGAAAGCTTCAAACTTCACACCACTTTGAATCCGGCTCAGAAACAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGACGAAATTGAAACAAACAGAAGTAGATTGTGAGTTTTTGAAGAAATGTTGTGAAAGATTAAACGAAGAAAACCGAAGGTTGAAGAAAGAATTGCATGAATTAAGATCCCTTAAACTTGGAGCTTCACAATTGTACATTCAGCTGCCCAAGGCGGGCACACTCACAATTTGCCCTTCATGCGACAAAATTACAAGGACGGCCGCCGCCAACGCCGCCGCCGTCGACGGCTAATTCTCCGCCACAATAATTTAATAATGCCCTTTTTCTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTCCCGGCTGTGTGTTTTGGTACAGCAAAAAAGAATAATTAAATTCAATAACAATACAGCCTTTTTTAGATTTTACATCAAATCATCTTAAATTAAACTATGTTATGAAAAAAATCAGAG ATGGGAGATCATCAAGATGAGGTATGCAATATCAGCTGGCTTAGCCTTGGTTTGGGATTTGGTGAATATGTCCCAAAAAAGATGCAAAAAATCAACAATAAGCAGCAGCAGCAGCAACAACAACAACAACAATTCTCTTTCACTCTCATTCCAAAAGAAGAATTGGGTATTAACAATAACGACGACGACAACAACAACATCAATATGGAAATTGACTATGAAGCTAATTCAAGTGAAGAAGATGATCATCATTTGATGAAGAGAATTAGAAGCAATAATAATATTGTTAATTATGATCAAGATTCCTCCTTTGGAATTAGAAGATCATCATCAGATCATCATCATCAGTACAACAACAACAACAAAAATATTATTACTACTAATCATAATTATAAGGGGATTAGTAGTAGTAGTGGATCAGAATTAACGGAGAGAAAAAAGCTTAGGCTTTCCAAAGAACAATCCACTTTGCTGGAAGAAAGCTTCAAACTTCACACCACTTTGAATCCGGCTCAGAAACAGGCACTTGCCCAACAATTAAACCTCAAAACTCGACAAGTGGAAGTTTGGTTTCAAAACAGACGTGCAAGGACGAAATTGAAACAAACAGAAGTAGATTGTGAGTTTTTGAAGAAATGTTGTGAAAGATTAAACGAAGAAAACCGAAGGTTGAAGAAAGAATTGCATGAATTAAGATCCCTTAAACTTGGAGCTTCACAATTGTACATTCAGCTGCCCAAGGCGGGCACACTCACAATTTGCCCTTCATGCGACAAAATTACAAGGACGGCCGCCGCCAACGCCGCCGCCGTCGACGGCTAA MGDHQDEVCNISWLSLGLGFGEYVPKKMQKINNKQQQQQQQQQQFSFTLIPKEELGINNNDDDNNNINMEIDYEANSSEEDDHHLMKRIRSNNNIVNYDQDSSFGIRRSSSDHHHQYNNNNKNIITTNHNYKGISSSSGSELTERKKLRLSKEQSTLLEESFKLHTTLNPAQKQALAQQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHELRSLKLGASQLYIQLPKAGTLTICPSCDKITRTAAANAAAVDG Homology
BLAST of CcUC06G123850 vs. NCBI nr
Match: XP_038879995.1 (homeobox-leucine zipper protein HOX17-like [Benincasa hispida]) HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-112 Identity = 240/278 (86.33%), Postives = 249/278 (89.57%), Query Frame = 0
BLAST of CcUC06G123850 vs. NCBI nr
Match: XP_004150745.1 (homeobox-leucine zipper protein HOX18 [Cucumis sativus] >KGN65506.1 hypothetical protein Csa_019735 [Cucumis sativus]) HSP 1 Score: 375.6 bits (963), Expect = 3.8e-100 Identity = 224/272 (82.35%), Postives = 234/272 (86.03%), Query Frame = 0
BLAST of CcUC06G123850 vs. NCBI nr
Match: XP_008453538.1 (PREDICTED: homeobox-leucine zipper protein HOX18-like [Cucumis melo] >KAA0058190.1 homeobox-leucine zipper protein HOX18-like [Cucumis melo var. makuwa]) HSP 1 Score: 374.8 bits (961), Expect = 6.4e-100 Identity = 227/278 (81.65%), Postives = 236/278 (84.89%), Query Frame = 0
BLAST of CcUC06G123850 vs. NCBI nr
Match: XP_022134791.1 (homeobox-leucine zipper protein HAT22-like [Momordica charantia]) HSP 1 Score: 260.8 bits (665), Expect = 1.3e-65 Identity = 178/266 (66.92%), Postives = 188/266 (70.68%), Query Frame = 0
BLAST of CcUC06G123850 vs. NCBI nr
Match: XP_022931479.1 (homeobox-leucine zipper protein HAT3-like [Cucurbita moschata]) HSP 1 Score: 258.1 bits (658), Expect = 8.7e-65 Identity = 165/272 (60.66%), Postives = 175/272 (64.34%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy Swiss-Prot
Match: P46604 (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39 Identity = 84/119 (70.59%), Postives = 105/119 (88.24%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy Swiss-Prot
Match: P46602 (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=1 SV=2) HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39 Identity = 85/134 (63.43%), Postives = 111/134 (82.84%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy Swiss-Prot
Match: P46665 (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3) HSP 1 Score: 161.4 bits (407), Expect = 1.5e-38 Identity = 86/121 (71.07%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy Swiss-Prot
Match: P92953 (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana OX=3702 GN=ATHB-4 PE=1 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.9e-38 Identity = 84/126 (66.67%), Postives = 106/126 (84.13%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy Swiss-Prot
Match: Q01I23 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=HOX17 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.5e-38 Identity = 87/155 (56.13%), Postives = 111/155 (71.61%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy TrEMBL
Match: A0A0A0M012 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G433050 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.8e-100 Identity = 224/272 (82.35%), Postives = 234/272 (86.03%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy TrEMBL
Match: A0A5A7USQ4 (Homeobox-leucine zipper protein HOX18-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005100 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 3.1e-100 Identity = 227/278 (81.65%), Postives = 236/278 (84.89%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy TrEMBL
Match: A0A1S3BWH2 (homeobox-leucine zipper protein HOX18-like OS=Cucumis melo OX=3656 GN=LOC103494220 PE=4 SV=1) HSP 1 Score: 374.8 bits (961), Expect = 3.1e-100 Identity = 227/278 (81.65%), Postives = 236/278 (84.89%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy TrEMBL
Match: A0A6J1BYS3 (homeobox-leucine zipper protein HAT22-like OS=Momordica charantia OX=3673 GN=LOC111006976 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 6.5e-66 Identity = 178/266 (66.92%), Postives = 188/266 (70.68%), Query Frame = 0
BLAST of CcUC06G123850 vs. ExPASy TrEMBL
Match: A0A6J1EUD1 (homeobox-leucine zipper protein HAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111437643 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 4.2e-65 Identity = 165/272 (60.66%), Postives = 175/272 (64.34%), Query Frame = 0
BLAST of CcUC06G123850 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 ) HSP 1 Score: 163.7 bits (413), Expect = 2.1e-40 Identity = 85/134 (63.43%), Postives = 111/134 (82.84%), Query Frame = 0
BLAST of CcUC06G123850 vs. TAIR 10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family ) HSP 1 Score: 163.7 bits (413), Expect = 2.1e-40 Identity = 84/119 (70.59%), Postives = 105/119 (88.24%), Query Frame = 0
BLAST of CcUC06G123850 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana ) HSP 1 Score: 161.4 bits (407), Expect = 1.0e-39 Identity = 86/121 (71.07%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of CcUC06G123850 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 ) HSP 1 Score: 161.0 bits (406), Expect = 1.4e-39 Identity = 84/126 (66.67%), Postives = 106/126 (84.13%), Query Frame = 0
BLAST of CcUC06G123850 vs. TAIR 10
Match: AT2G22800.1 (Homeobox-leucine zipper protein family ) HSP 1 Score: 148.3 bits (373), Expect = 9.1e-36 Identity = 94/190 (49.47%), Postives = 123/190 (64.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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