CcUC06G120940 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G120940
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosomal protein
Location	CicolChr06: 23013615 .. 23015193 (+)
RNA-Seq Expression	CcUC06G120940
Synteny	CcUC06G120940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCATACTGTGCTTAACGTTCATCTCACCTGCTCGCCGTCGCTCTCGATTCGAAGGTATTACGTTCGGAAATCATTCATCTTCTCATTTAAGCTTTGCTTCAACGGTAGTTACTGCAGCATCTTCATGTTCCTTGTTAATCTTTGCTGTCAATTCTCTCTAGGGTTTTAGGGTTTTCCATTTAGACCTTGCGAAAATTATCTAATTTATGTAAATCACTTTGGAAATTTCAACTTTAATTGCTGTTGTATTGCTATTTCCGTGGCTTCTCATTCTATAATTTTTTTACTTTCGGTTCTATTTTTAATTTCTTTATGCAAAGGTTGATTGTTTCGATTAATCTTCTTTGCGTTTTTGATTTTGAATGATTCAGGAAGAATTCATTATTGGGTTAATCAAGTAAAAATTTAGCGTTCTTAATCATAACTCGGCAATTTGATAACGGGATTGTTGGGAGGAGCTCATTGGTTCCCTGCAAAATCTCTTACCTTTCTCTAATTTGCGACTTAATGAGATTAACATTTGTTATTTCTTCACATTTCTTTTCTGGGATTTCAATTCAAGTACTGGAGTTCAGAGTTTTACCTTGTAGATCCATGAATTTGACCATTTTTTACTAGCATTTTTAGTGTATCCTTACTACTTTCCTTCATTTTAGCGTTGGAATTGGAATTGACGGTCTTGAGATATGGTAATTTTATTGCAATGGAGTGCCGCTTGATTTCTTTGTTTTTTTTTTTTAATTTTCTTCCTCCAGCTATGAAAGTCCGTTCTTCAGTGAAAAAGATGTGCGAGTTTTGTAGGACAGTGAAACGTCGAGGTCGAGTATATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCTACATTTGCAAGTGAAGGTCCTTCTCCTTCCTTGTGAGTACTTAACTTTCCTTTGGTTTGGGCATTGTCAGTTGTCTTTGAATGTGTACTTTATCCGTTCAAGTATTTTTAAATGGAAAACTCTGAACAATTATTCCTTTTGCCACTGATGAGAGTTGTCGTAGAACTCAGGCCAAGGACTCCCAAGTTATTTCTTAAGGTGTATGAATGTAGTTTGAGTTTGGTAAAACCTCAACGGACAGAACTCTTATATGTAAAATTGTACAACTTTTGTGAATATGGTGAAGGCTTGATTCCCGGATTGGTGGTTCAAATTGGTCACGTATAAGTCTTCTTTCAGTTTGATCCTCTACAATGCAGCTAGAGTTTGTTTTTGGGATTGCTGGAAGTTGTTTTTTCGTTAATCGTTATCATGAATAATATGCTCAGGTCTCTTCTTGTTCACATATCTGTATATGGTATGAATTGTGATGGTAGGCATGGTCATATTTGGGATTAATCACACGATTCTTGTAGCTAAATGCATTAAACGTTGCCCATTTTTCAGGTTGTCAAGAAGTGAGGTGAAGCAAGAGATTCTTCCCAGTCACAGCTCGCAAACGGGGCTGGCTTCTCTCATCCCCCAAAAGCATGAGCCAACAATGTTGCTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAATTAG

mRNA sequence

ATGTTCCATACTGTGCTTAACGTTCATCTCACCTGCTCGCCGTCGCTCTCGATTCGAAGGTATTACGTTCGGAAATCATTCATCTTCTCATTTAAGCTTTGCTTCAACGGTACGTTGGAATTGGAATTGACGGTCTTGAGATATGCTATGAAAGTCCGTTCTTCAGTGAAAAAGATGTGCGAGTTTTGTAGGACAGTGAAACGTCGAGGTCGAGTATATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCTACATTTGCAAGTGAAGGTCCTTCTCCTTCCTTGTTGTCAAGAAGTGAGGTGAAGCAAGAGATTCTTCCCAGTCACAGCTCGCAAACGGGGCTGGCTTCTCTCATCCCCCAAAAGCATGAGCCAACAATGTTGCTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAATTAG

Coding sequence (CDS)

ATGTTCCATACTGTGCTTAACGTTCATCTCACCTGCTCGCCGTCGCTCTCGATTCGAAGGTATTACGTTCGGAAATCATTCATCTTCTCATTTAAGCTTTGCTTCAACGGTACGTTGGAATTGGAATTGACGGTCTTGAGATATGCTATGAAAGTCCGTTCTTCAGTGAAAAAGATGTGCGAGTTTTGTAGGACAGTGAAACGTCGAGGTCGAGTATATGTATACTGCTCATCCAATCCCAAACACAAGCAACGCCAAGGCCTATCTACATTTGCAAGTGAAGGTCCTTCTCCTTCCTTGTTGTCAAGAAGTGAGGTGAAGCAAGAGATTCTTCCCAGTCACAGCTCGCAAACGGGGCTGGCTTCTCTCATCCCCCAAAAGCATGAGCCAACAATGTTGCTTGGTTGGAGAATGGGTCTGGCTTCAATCCTGTTGAAGAAACACAATTAG

Protein sequence

MFHTVLNVHLTCSPSLSIRRYYVRKSFIFSFKLCFNGTLELELTVLRYAMKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQEILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN

Homology

[Close]

BLAST of CcUC06G120940 vs. NCBI nr
Match: XP_004150587.2 (uncharacterized protein LOC101223220 [Cucumis sativus] >KGN65627.2 hypothetical protein Csa_020116 [Cucumis sativus])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 106/148 (71.62%), Postives = 115/148 (77.70%), Query Frame = 0


Query: 8   VHLTCSPSLSI------RRYYVRKSFIFSFKLCFNGTLELELTVLRYAMKVRSSVKKMCE 67
           +H   SPS  +       R + +KSFIFS  LC N            AMKVRSSVKKMCE
Sbjct: 8   IHTLFSPSSQLLTVTLDPRVFAKKSFIFSLNLCIN------------AMKVRSSVKKMCE 67

Query: 68  FCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQEILPSHSSQTGLA 127
           FCRTVKR+GRVY+YCSSNPKHKQRQGLSTFASEGPSPSL SR+EVKQEILPS S +TGLA
Sbjct: 68  FCRTVKRKGRVYIYCSSNPKHKQRQGLSTFASEGPSPSLFSRTEVKQEILPSQSLRTGLA 127

Query: 128 SLIPQKHEPTMLLGWRMGLASILLKKHN 150
           SLIPQK+EPTM LGWRMGLASILLKKHN
Sbjct: 128 SLIPQKNEPTMFLGWRMGLASILLKKHN 143

[Close]

BLAST of CcUC06G120940 vs. NCBI nr
Match: XP_038879717.1 (uncharacterized protein LOC120071478 [Benincasa hispida])

HSP 1 Score: 190.7 bits (483), Expect = 9.3e-45
Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGP PSL SRSEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPPPSLFSRSEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           +LPSHSS+TGLASLIPQKHEPTMLLGWRMGLASILLKK N
Sbjct: 61  LLPSHSSRTGLASLIPQKHEPTMLLGWRMGLASILLKKRN 100

[Close]

BLAST of CcUC06G120940 vs. NCBI nr
Match: XP_022144930.1 (uncharacterized protein LOC111014487 [Momordica charantia])

HSP 1 Score: 186.8 bits (473), Expect = 1.3e-43
Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSP L SRSEVKQE
Sbjct: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPS+S +TGLASLIPQKHEPT + GWRMGLASILLKKHN
Sbjct: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100

[Close]

BLAST of CcUC06G120940 vs. NCBI nr
Match: KAG7023520.1 (rpmJ, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185.7 bits (470), Expect = 3.0e-43
Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLST ASEGPSP L   SEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPSHSS+TGLASL+PQKHEPTML+GWRMGLASILLKKHN
Sbjct: 61  ILPSHSSRTGLASLLPQKHEPTMLIGWRMGLASILLKKHN 100

[Close]

BLAST of CcUC06G120940 vs. NCBI nr
Match: XP_022987917.1 (uncharacterized protein LOC111485318 [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 5.1e-43
Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLST ASEGPSP L   SEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPSHSS+TGLASL+PQKHEPTML GWRMGLASILLKKHN
Sbjct: 61  ILPSHSSRTGLASLLPQKHEPTMLFGWRMGLASILLKKHN 100

[Close]

BLAST of CcUC06G120940 vs. ExPASy Swiss-Prot
Match: P73300 (50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.9e-10
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 50 MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 88
          MKVR+SVKKMC+ CR ++RRGRV V CS+NPKHKQRQG
Sbjct: 1  MKVRASVKKMCDKCRVIRRRGRVMVICSANPKHKQRQG 38

[Close]

BLAST of CcUC06G120940 vs. ExPASy Swiss-Prot
Match: A5VLI2 (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 50 MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 88
          MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38

[Close]

BLAST of CcUC06G120940 vs. ExPASy Swiss-Prot
Match: B2G8V5 (50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.0e-09
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 50 MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 88
          MKVR SVKKMCE C+ VKR GRV V CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKIVKRNGRVMVICSANPKHKQRQG 38

[Close]

BLAST of CcUC06G120940 vs. ExPASy Swiss-Prot
Match: B3WAJ5 (50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23) OX=543734 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 50 MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 88
          MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38

[Close]

BLAST of CcUC06G120940 vs. ExPASy Swiss-Prot
Match: Q035A6 (50S ribosomal protein L36 OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 17002 / CIP 107868 / KCTC 3260 / NRRL B-441) OX=321967 GN=rpmJ PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-09
Identity = 28/38 (73.68%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 50 MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 88
          MKVR SVKKMCE C+ V+R+GRV + CS+NPKHKQRQG
Sbjct: 1  MKVRPSVKKMCEHCKVVRRKGRVMIICSANPKHKQRQG 38

[Close]

BLAST of CcUC06G120940 vs. ExPASy TrEMBL
Match: A0A6J1CT08 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111014487 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.5e-44
Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSP L SRSEVKQE
Sbjct: 1   MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPPLFSRSEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPS+S +TGLASLIPQKHEPT + GWRMGLASILLKKHN
Sbjct: 61  ILPSYSPRTGLASLIPQKHEPTTMFGWRMGLASILLKKHN 100

[Close]

BLAST of CcUC06G120940 vs. ExPASy TrEMBL
Match: A0A6J1JBN8 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111485318 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.5e-43
Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVR+SVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLST ASEGPSP L   SEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTSASEGPSPHLFPSSEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPSHSS+TGLASL+PQKHEPTML GWRMGLASILLKKHN
Sbjct: 61  ILPSHSSRTGLASLLPQKHEPTMLFGWRMGLASILLKKHN 100

[Close]

BLAST of CcUC06G120940 vs. ExPASy TrEMBL
Match: A0A6J1EZS5 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111440855 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.2e-43
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVR+SVKKMCEFCRTV+RRGRVY+YCS+NPKHKQRQGLSTFASE PSPSL SRSEVKQE
Sbjct: 1   MKVRASVKKMCEFCRTVRRRGRVYIYCSANPKHKQRQGLSTFASEAPSPSLFSRSEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPSHSS+TGLASLIPQKHEPTML GWRMGLASIL KK N
Sbjct: 61  ILPSHSSRTGLASLIPQKHEPTMLFGWRMGLASILWKKQN 100

[Close]

BLAST of CcUC06G120940 vs. ExPASy TrEMBL
Match: A0A1S3B8W2 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103487446 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.2e-43
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFA EGPSPSL SR+EVKQE
Sbjct: 1   MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFACEGPSPSLFSRTEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPS  S+ GLASLIPQK+EPTMLLGWRMGLASILLKKHN
Sbjct: 61  ILPSQGSRMGLASLIPQKNEPTMLLGWRMGLASILLKKHN 100

[Close]

BLAST of CcUC06G120940 vs. ExPASy TrEMBL
Match: A0A5A7U4L3 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001300 PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 7.2e-43
Identity = 90/100 (90.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPSLLSRSEVKQE 109
           MKVRSSVKKMCEFCRTVKR+GRVY+YCSSNPKHKQRQGLSTFA EGPSPSL SR+EVKQE
Sbjct: 1   MKVRSSVKKMCEFCRTVKRKGRVYIYCSSNPKHKQRQGLSTFACEGPSPSLFSRTEVKQE 60

Query: 110 ILPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           ILPS  S+ GLASLIPQK+EPTMLLGWRMGLASILLKKHN
Sbjct: 61  ILPSQGSRMGLASLIPQKNEPTMLLGWRMGLASILLKKHN 100

[Close]

BLAST of CcUC06G120940 vs. TAIR 10
Match: AT5G20180.1 (Ribosomal protein L36 )

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-28
Identity = 66/103 (64.08%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPS-LLSRSEVKQ 109
           MKVRSSVKKMCEFC+TVKRRGRVYV CSSNPKHKQRQG S+FA EG +PS L +     Q
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60

Query: 110 EI--LPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           E+  LP      GLASL+ ++  PT   GWR GLASIL K+ N
Sbjct: 61  ELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN 103

[Close]

BLAST of CcUC06G120940 vs. TAIR 10
Match: AT5G20180.2 (Ribosomal protein L36 )

HSP 1 Score: 121.7 bits (304), Expect = 5.0e-28
Identity = 66/103 (64.08%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 50  MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQGLSTFASEGPSPS-LLSRSEVKQ 109
           MKVRSSVKKMCEFC+TVKRRGRVYV CSSNPKHKQRQG S+FA EG +PS L +     Q
Sbjct: 1   MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60

Query: 110 EI--LPSHSSQTGLASLIPQKHEPTMLLGWRMGLASILLKKHN 150
           E+  LP      GLASL+ ++  PT   GWR GLASIL K+ N
Sbjct: 61  ELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN 103

[Close]

BLAST of CcUC06G120940 vs. TAIR 10
Match: ATCG00760.1 (ribosomal protein L36 )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0


Query: 50 MKVRSSVKKMCEFCRTVKRRGRVYVYCSSNPKHKQRQG 88
          MK+R+SV+K+CE CR ++RRGR+ V C SNP+HKQRQG
Sbjct: 1  MKIRASVRKICEKCRLIRRRGRIIVIC-SNPRHKQRQG 37

The following BLAST results are available for this feature:

BLAST of CcUC06G120940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150587.2	1.2e-47	71.62	uncharacterized protein LOC101223220 [Cucumis sativus] >KGN65627.2 hypothetical ...	[more]
XP_038879717.1	9.3e-45	94.00	uncharacterized protein LOC120071478 [Benincasa hispida]	[more]
XP_022144930.1	1.3e-43	92.00	uncharacterized protein LOC111014487 [Momordica charantia]	[more]
KAG7023520.1	3.0e-43	91.00	rpmJ, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022987917.1	5.1e-43	91.00	uncharacterized protein LOC111485318 [Cucurbita maxima]	[more]

BLAST of CcUC06G120940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P73300	5.9e-10	76.32	50S ribosomal protein L36 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=111...	[more]
A5VLI2	1.0e-09	78.95	50S ribosomal protein L36 OS=Lactobacillus reuteri (strain DSM 20016) OX=557436 ...	[more]
B2G8V5	1.0e-09	78.95	50S ribosomal protein L36 OS=Lactobacillus reuteri (strain JCM 1112) OX=557433 G...	[more]
B3WAJ5	1.3e-09	73.68	50S ribosomal protein L36 OS=Lactobacillus casei (strain BL23) OX=543734 GN=rpmJ...	[more]
Q035A6	1.3e-09	73.68	50S ribosomal protein L36 OS=Lactobacillus paracasei (strain ATCC 334 / BCRC 170...	[more]

BLAST of CcUC06G120940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT08	6.5e-44	92.00	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111014487 PE=3 SV=1	[more]
A0A6J1JBN8	2.5e-43	91.00	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111485318 PE=3 SV=1	[more]
A0A6J1EZS5	3.2e-43	90.00	Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111440855 PE=3 SV=1	[more]
A0A1S3B8W2	7.2e-43	90.00	Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103487446 PE=3 SV=1	[more]
A0A5A7U4L3	7.2e-43	90.00	Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00...	[more]

BLAST of CcUC06G120940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20180.1	5.0e-28	64.08	Ribosomal protein L36	[more]
AT5G20180.2	5.0e-28	64.08	Ribosomal protein L36	[more]
ATCG00760.1	1.5e-08	65.79	ribosomal protein L36	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000473	Ribosomal protein L36	TIGRFAM	TIGR01022	TIGR01022	coord: 50..87 e-value: 1.6E-17 score: 61.3
IPR000473	Ribosomal protein L36	PFAM	PF00444	Ribosomal_L36	coord: 50..87 e-value: 1.2E-21 score: 76.5
IPR000473	Ribosomal protein L36	PROSITE	PS00828	RIBOSOMAL_L36	coord: 60..86
IPR000473	Ribosomal protein L36	HAMAP	MF_00251	Ribosomal_L36	coord: 50..87 score: 18.611782
None	No IPR available	PANTHER	PTHR18804	FAMILY NOT NAMED	coord: 50..148
None	No IPR available	PANTHER	PTHR18804:SF16	RIBOSOMAL PROTEIN	coord: 50..148
IPR035977	Ribosomal protein L36 superfamily	SUPERFAMILY	57840	Ribosomal protein L36	coord: 50..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G120940.1	CcUC06G120940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome