Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAAATGTGGCCTCTCTTCCAACTTTGACTCAATCCCTTACCATCAAGTTGTCTAATACTAATTATCTACTATGGAAAAATCAATTACTCAATCTGATTATGGGATATGGTTTGGAGAGTTTCATCGATGGCACATCTCCACAACCACCAAAGTTTCTTGAACCACAACGTAGGTAAATCCTTATTTTTCTCTTTGGCAGAAGTACAATCACACACTTATAAGCTGGTTTTATGCTCTTTTAATGAAAATAAGTTGGGAGAAATTATGGGCTTTGGAATTGCGTTTGAAATCTGGGAAGCACGACGTACAGTATACGAGTCTTCTTCAATAGCTTGAATAATGTGTCTTCATTAACAACTTTAGAGAATAAAGAAGGAGGGTCTCACAATAGCTTAGTATTTGGCTCAAATTAAAGATGTGGCTAACAAATTTTCTGCAATTGGAGAACCCCTATCGTATCGAGATCATTTGGGTTACATCCTTGAATGGCTTGGAAATGAATATAATCCTTTTGTAACATCAATTCAAAATCGTACTATCGTTCTTCTATTGTAGATGTCAAGAGCTTACTTATTGCCTATGAAGCTCGACTAGAAAAGCAAACAGCTATGGATCAGTTGAATTTCATTCAAGCTAATCTTGCACATGTTTCGTTCGGACAGAACTCTTGTCGCGCTGCTTGGCCTTCGACTAGTAAATCTCCTACTCAATTCCCTATTCCTCAAACCAATTTTTCAAACCCAGGTATGCCCACTTCTTTTACTTCTTTTCCTCCATCTAGATCACCTCGACCTTCACTTGGAAGTCAAAATTGGCCTTCTCCCCAGCCTTCAAATCGACCACAATGTCAGATCTGTAACAAACTTGGGCATGCTGCCCTTACGTGTTATAACTTAGACAATCCAAAGTATCAAATCACCTCAAACAACCCTCCACCTCAGGCTCATCTTGTCCACACCTCCCCTGCTCAAGGCTTTTCCCCACAAATTGAGCCTCATTCTACTCCCAACACTATCCATCCTAATGAAAATTGTTAAATGGACACTGCCACCACCCATCATATGACCCCTGACCTCGCCAATGATATCTTAGATCTATGGTCTCCAAGACACCAAAACAATATGCACTTAATCTCTCCATAATCTCATCAAGAGGAGAGATCTTACTTAGAGTTTTGGTTGAGGAAGACAATAATCACCTTGTTGTTACCATTAATCTTGCAATCGAATCTGGTATGTTATTTATTCTTGGCAATTTGGCTTCAACAATAATCGTAAGATTTAGTCTATTCAATAGATTATAAGTTTTTATGCTAACAAGTGGTATCAAAGCATGAATTTCGTGTTAGCTTGTCAGGTTTTTTCTTGTTTACCATTGTTTTGATTCAATTTTCGGTAAAATAAAAAAAGAGGTTTTGAGTTTGTATAATAGATGTTTTTTGTTTTTGTTTTCTTTTTTTTTTTTTTGGCATCTTAGATTTACAGTTTAATGTTGATTCGATCATTGTTCAAGTCCATTGTTTTGGGCAAAATTGTTCGTAAATCAAGTCTTGTAAGTTTGTGTCATTTGTGGCAATTTTTTCATTGAAGAAGATTCAGAACAGAGGTGAAAAACGGAAGTTGAAGTGCAAACCCGAGAGGTTTTAGTGTAGGGTGCTCCTGTCGTCATATTTTGTGCATCATTAAAAGCTTCTAACCAGCTGACCGTTATTGTGTATGCGTCATGGATTCCCCTAGAATTGAATTCATTTTCCCTTGGTATAATTATTGCAAAAGTTGGTCGAAAATTGAAATTTTTGGGAACCCTAATTAAGGTTAAAGGAGTTTTATCGATGAATTCAGTAAATTGAAATTTGATTGATAATTTGGGTGATTTAAAACCCTTCTCTTTCTGCTTTTCCGTAGACTGATTCTTCCACTGGGCATCACACATTTCTCTGCATAAATAATCATTAAAAAATGCATGAGATAAAGGACAACCATTCGTTTTACATCTAGAAAAGATTAATTTTAGATTAATTTGTCATTTGGGCCTCAGAGTTTTAGCCCAATTAGCCCAACACAAGCTTTTGGTTTTGTCGATGGATCTACTCCAAAACCCATTGCATTCTTGAAAACGGCCTCAAGCTACAGTCGCTGCTAATGCTAGCTCTTCGTCCAGAACTGCATCGTCCTCAACTCTTCAACCCAATCCATTGTATGAATAATGGATTGCTAAAACATTATTTTCTTCGCCACACTATCTGCTCCTGTTATGACCTATGTTACGTTGTTGGCTGAAAACAGCAAAAGAAATGTGGGAGACTCTTGACTTCAACAATAATTGCTGTAAATCTGAAAATGGATCTTCAATATCGATCCATCAACAAGAACTCCCAAGTGAAACAATTGGTCAATATATCTACCACATCAAAGAAATCCATATGTTCTTGTTTATTACAAGTACTATAGCAAAGGTCCATACTAGGTCTTTGGCTAACCTCACTATTCTTTGAACTGAAACAAAGCGTCGAACATTATTTATGATGTGTGCAATATGTGTTGTCATTGTTCAAGATGATCAATTGACAAAATAATATGTAATGGTTGTATACTCAGTTCCATAATTCTTTTTTCGAGCAATACTTAGATACATTCTAAGATGCATCATTTTTTAGATGACCCATATCAAATCTAAAAATATTTTTAAAAAAAAGTAAAGAAGAGTTTTCACGTAAATTATGATTAGACAATTAAATAAGATGAACAAAGACATGTGTACTAGCATATGCATGTTAATTTTTTTCCGGTAATTGATTGTTCTATGAAACTTTGGTTCAATTTACCAATTCTTTTCTTTTTTCAATACATTAGTAGTGGAGGATTTGAATTACAATTCTCTTGGTCGCAAATATATTTTATATATCAATTGAGTTATGCTTGCTTTTGGCACCTATTCATTCATTCTTAATTTCTCGCCTATATTGATCCATTTGTACGAGACGGTTAATTGTATTGATTTCAACCTTTTTTTTAAAAAAATAATTTCGCTAATGTGGTCTAAGCAAACCCCATTTTCTTTTAAAAAAATATTCTTTTTCTTTCTAAAAGGTGTAATCTTACCATTAAACTAACATTTCAGAACAATACTTAA
mRNA sequence
TCAAATGTGGCCTCTCTTCCAACTTTGACTCAATCCCTTACCATCAAGTTGTCTAATACTAATTATCTACTATGGAAAAATCAATTACTCAATCTGATTATGGGATATGGTTTGGAGAGTTTCATCGATGGCACATCTCCACAACCACCAAAGTTTCTTGAACCACAACAAGTACAATCACACACTTATAAGCTGGTTTTATGCTCTTTTAATGAAAATAAGTTGGGAGAAATTATGGGCTTTGGAATTGCGTTTGAAATCTGGGAAGCACGACATGTGGCTAACAAATTTTCTGCAATTGGAGAACCCCTATCGTATCGAGATCATTTGGGTTACATCCTTGAATGGCTTGGAAATGAATATAATCCTTTTGTAACATCAATTCAAAATCATGTCAAGAGCTTACTTATTGCCTATGAAGCTCGACTAGAAAAGCAAACAGCTATGGATCAGTTGAATTTCATTCAAGCTAATCTTGCACATGTTTCGTTCGGACAGAACTCTTGTCGCGCTGCTTGGCCTTCGACTAGTAAATCTCCTACTCAATTCCCTATTCCTCAAACCAATTTTTCAAACCCAGGTATGCCCACTTCTTTTACTTCTTTTCCTCCATCTAGATCACCTCGACCTTCACTTGGAAGTCAAAATTGGCCTTCTCCCCAGCCTTCAAATCGACCACAATGTCAGATCTGTAACAAACTTGGGCATGCTGCCCTTACGTGTTATAACTTAGACAATCCAAAGTGTAATCTTACCATTAAACTAACATTTCAGAACAATACTTAA
Coding sequence (CDS)
TCAAATGTGGCCTCTCTTCCAACTTTGACTCAATCCCTTACCATCAAGTTGTCTAATACTAATTATCTACTATGGAAAAATCAATTACTCAATCTGATTATGGGATATGGTTTGGAGAGTTTCATCGATGGCACATCTCCACAACCACCAAAGTTTCTTGAACCACAACAAGTACAATCACACACTTATAAGCTGGTTTTATGCTCTTTTAATGAAAATAAGTTGGGAGAAATTATGGGCTTTGGAATTGCGTTTGAAATCTGGGAAGCACGACATGTGGCTAACAAATTTTCTGCAATTGGAGAACCCCTATCGTATCGAGATCATTTGGGTTACATCCTTGAATGGCTTGGAAATGAATATAATCCTTTTGTAACATCAATTCAAAATCATGTCAAGAGCTTACTTATTGCCTATGAAGCTCGACTAGAAAAGCAAACAGCTATGGATCAGTTGAATTTCATTCAAGCTAATCTTGCACATGTTTCGTTCGGACAGAACTCTTGTCGCGCTGCTTGGCCTTCGACTAGTAAATCTCCTACTCAATTCCCTATTCCTCAAACCAATTTTTCAAACCCAGGTATGCCCACTTCTTTTACTTCTTTTCCTCCATCTAGATCACCTCGACCTTCACTTGGAAGTCAAAATTGGCCTTCTCCCCAGCCTTCAAATCGACCACAATGTCAGATCTGTAACAAACTTGGGCATGCTGCCCTTACGTGTTATAACTTAGACAATCCAAAGTGTAATCTTACCATTAAACTAACATTTCAGAACAATACTTAA
Protein sequence
SNVASLPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQVQSHTYKLVLCSFNENKLGEIMGFGIAFEIWEARHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQNHVKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQFPIPQTNFSNPGMPTSFTSFPPSRSPRPSLGSQNWPSPQPSNRPQCQICNKLGHAALTCYNLDNPKCNLTIKLTFQNNT
Homology
BLAST of CcUC06G120860 vs. NCBI nr
Match:
XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])
HSP 1 Score: 179.1 bits (453), Expect = 4.9e-41
Identity = 112/299 (37.46%), Postives = 156/299 (52.17%), Query Frame = 0
Query: 7 PTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQVQSHT---- 66
PTL Q L +KL++ N+LLWKNQLLN ++ GL ++DGT PP+FL+ Q+Q +
Sbjct: 24 PTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYA 83
Query: 67 ----YKLVLC----SFNENKLGEIMGFGIAFEIWEA------------------------ 126
+L++C S +E K+GE++ +IW +
Sbjct: 84 WERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTRVYDSKTTARIMGLKTELQNLR 143
Query: 127 -------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQNH------ 186
+ +A+KF+A+GEPLSYRDHL ++L+ LG+EYN FVTSI N
Sbjct: 144 KDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSL 203
Query: 187 --VKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQFPIPQTN 246
V+SLL+AYEARL+KQ +DQLN QANL ++S NS + P +F P N
Sbjct: 204 EDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQHNS--------KRPPPKFSFP--N 263
BLAST of CcUC06G120860 vs. NCBI nr
Match:
GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa])
HSP 1 Score: 138.3 bits (347), Expect = 9.6e-29
Identity = 78/207 (37.68%), Postives = 115/207 (55.56%), Query Frame = 0
Query: 1 SNVASLPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQVQS 60
S + ++P++ Q L +KL + NY++WK QLLN+++ GLE F+DG+ PP+FL+PQQ QS
Sbjct: 39 SPLPNMPSINQPLAVKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQS 98
Query: 61 ----HTYK--------LVLCSFNENKLGEIMGFGIAFEIWEA------------------ 120
H+++ + S NE+ LG+I+G+ A +IWEA
Sbjct: 99 NPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRT 158
Query: 121 -------------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQN- 151
RH+ N ++IGEP++Y DHL Y L LG +YNPFVTSIQ+
Sbjct: 159 ALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQ 218
BLAST of CcUC06G120860 vs. NCBI nr
Match:
GFZ12741.1 (UBX domain-containing protein [Actinidia rufa])
HSP 1 Score: 136.7 bits (343), Expect = 2.8e-28
Identity = 98/296 (33.11%), Postives = 143/296 (48.31%), Query Frame = 0
Query: 1 SNVASLPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQVQS 60
S + ++P++ Q L +KL + NY++WK QLLN+++ GLE F+DG+ PP+FL+PQQ QS
Sbjct: 39 SPLLNMPSINQPLAVKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQS 98
Query: 61 ----HTYK--------LVLCSFNENKLGEIMGFGIAFEIWEA------------------ 120
H+++ + S NE+ LG+I+G+ A +IWEA
Sbjct: 99 NPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRT 158
Query: 121 -------------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQNH 180
RH+ N ++IGEP++Y DHL Y L LG +YNPFVTSIQ+
Sbjct: 159 ALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQ 218
Query: 181 VKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQFPIPQTN-F 240
A +E+ T+ P++ +F P TN F
Sbjct: 219 ------AIRPSVEEPTS-------------------------PTSLTRKPKFKNPSTNSF 278
Query: 241 SNPGMPTSFTSFPPSRSPRPSLGSQNWPSPQPSNRPQCQICNKLGHAALTCYNLDN 247
N ++ S P ++ PS S N SP+P RP+CQIC K GH A CY+ N
Sbjct: 279 PN----SNSYSHPRGQNRNPSY-SPNPSSPKP--RPRCQICLKPGHTANKCYHHTN 296
BLAST of CcUC06G120860 vs. NCBI nr
Match:
PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale])
HSP 1 Score: 133.7 bits (335), Expect = 2.4e-27
Identity = 97/279 (34.77%), Postives = 136/279 (48.75%), Query Frame = 0
Query: 6 LPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEP-QQVQSHTY- 65
LP++ Q TIKL NYL+WKNQLLN+I+ GLE FIDG+ P PP+F +P +Q+ + Y
Sbjct: 45 LPSMNQPFTIKLDADNYLIWKNQLLNVIIANGLEDFIDGSRPCPPRFTDPARQIVNAEYI 104
Query: 66 ----------KLVLCSFNENKLGEIMGFGIAFEIWEA----------------------- 125
+ S + +G+I+G+ AFEIWEA
Sbjct: 105 AWQRFNRLIMSWIYASLTQGVMGQIVGYASAFEIWEALNQIYTSSSLAKITELRAKLQNL 164
Query: 126 --------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQ------- 185
+++ N +A+GEP+S +DHL Y+ L EYN FVTSI
Sbjct: 165 RKDGLTAIEYIQKHKNICNTLAAVGEPVSCKDHLLYLFGGLDREYNAFVTSITKRPDNLP 224
Query: 186 -NHVKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQFPIPQT 227
+ SLL++YE RLE Q A QL+ +QANLAH++ + R P+ S F
Sbjct: 225 LEEIYSLLLSYEFRLESQNASAQLSSLQANLAHLNINKKPYR---PNFSNPVGHF---TQ 284
BLAST of CcUC06G120860 vs. NCBI nr
Match:
XP_038891713.1 (uncharacterized protein LOC120081111 [Benincasa hispida])
HSP 1 Score: 125.6 bits (314), Expect = 6.5e-25
Identity = 79/165 (47.88%), Postives = 102/165 (61.82%), Query Frame = 0
Query: 89 EARHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQNHVK--------SLLIAYE 148
+ + VA+KFS +GE +SYRDHL +IL+ LG+EYN FVTSIQNHV SLL++YE
Sbjct: 23 QIKDVADKFSVVGESISYRDHLTHILDGLGSEYNAFVTSIQNHVDNLSVEDVWSLLLSYE 82
Query: 149 ARLEKQTAMDQLNFIQANLAHVSFGQNSCR-AAWPSTSKSPTQFPIPQTNFSNPGMPTSF 208
A+LEKQ A+D LN QA L+ +SF NS R A P + S P P NFS P +P++
Sbjct: 83 AQLEKQNAIDHLNIAQAYLSKLSFQHNSKRNALRPFPNHSSLILPSP--NFS-PILPSTS 142
Query: 209 TSFPPSRSPRPSLGSQNWPSPQPSNRPQCQICNKLGHAALTCYNL 245
S RPS + PS PS++PQCQI +K GH C+ L
Sbjct: 143 NSV----HARPSFNKKWPPSKPPSSKPQCQIYHKFGHIVPQCHQL 180
BLAST of CcUC06G120860 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09
Identity = 64/271 (23.62%), Postives = 113/271 (41.70%), Query Frame = 0
Query: 9 LTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQV---------- 68
+ S KL++TNYL+W Q+ L GY L F+DG++P PP + V
Sbjct: 18 VNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRW 77
Query: 69 ---QSHTYKLVLCSFNENKLGEIMGFGIAFEIWEA----------RHVA--------NKF 128
Y +L + + + + A +IWE HV ++
Sbjct: 78 RRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRFITRFDQL 137
Query: 129 SAIGEPLSYRDHLGYILEWLGNEYNPFVTSI--QNHVKSLLIAYEARLEKQTAMDQLNFI 188
+ +G+P+ + + + +LE L ++Y P + I ++ SL +E + +++ + LN
Sbjct: 138 ALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSA 197
Query: 189 QA--NLAHVSFGQNSCRAAWPSTSKSPTQFPIPQTNFSNPGMPTSFTSFPPSRSPRPSLG 245
+ A+V +N+ ++ + N SN P+S S +R P+P LG
Sbjct: 198 EVVPITANVVTHRNT-NTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLG 257
BLAST of CcUC06G120860 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 50.8 bits (120), Expect = 2.7e-05
Identity = 63/303 (20.79%), Postives = 109/303 (35.97%), Query Frame = 0
Query: 2 NVASLPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFL----EPQQ 61
N S+ + S KL++TNYL+W Q+ L GY L F+DG++ PP + P+
Sbjct: 11 NNTSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRV 70
Query: 62 VQSHT---------YKLVLCSFNENKLGEIMGFGIAFEIWEA----------RHVA---- 121
+T Y VL + + + + A +IWE HV
Sbjct: 71 NPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130
Query: 122 -----------------------NKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQ-- 181
++ + +G+P+ + + + +LE L EY P + I
Sbjct: 131 QLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAK 190
Query: 182 ------NHVKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQF 241
+ L+ +E+++ A+ I VS + + +++
Sbjct: 191 DTPPTLTEIHERLLNHESKI---LAVSSATVIPITANAVSHRNTTTTNNNNNGNRNNRYD 250
Query: 242 PIPQTNFSNPGMPTSFTSFPPSRSPRPSLGSQNWPSPQPSNRPQCQICNKLGHAALTCYN 247
N S P +S P + +P LG +CQIC GH+A C
Sbjct: 251 NRNNNNNSKPWQQSSTNFHPNNNQSKPYLG-------------KCQICGVQGHSAKRCSQ 297
BLAST of CcUC06G120860 vs. ExPASy TrEMBL
Match:
A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 2.4e-41
Identity = 112/299 (37.46%), Postives = 156/299 (52.17%), Query Frame = 0
Query: 7 PTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQVQSHT---- 66
PTL Q L +KL++ N+LLWKNQLLN ++ GL ++DGT PP+FL+ Q+Q +
Sbjct: 24 PTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGTIMPPPQFLDHHQLQPNPAYYA 83
Query: 67 ----YKLVLC----SFNENKLGEIMGFGIAFEIWEA------------------------ 126
+L++C S +E K+GE++ +IW +
Sbjct: 84 WERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTRVYDSKTTARIMGLKTELQNLR 143
Query: 127 -------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQNH------ 186
+ +A+KF+A+GEPLSYRDHL ++L+ LG+EYN FVTSI N
Sbjct: 144 KDGSSVSQYLAKIKEIADKFAAVGEPLSYRDHLAHVLDGLGSEYNAFVTSIHNRADSPSL 203
Query: 187 --VKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQFPIPQTN 246
V+SLL+AYEARL+KQ +DQLN QANL ++S NS + P +F P N
Sbjct: 204 EDVRSLLLAYEARLDKQNTVDQLNIAQANLVNLSLQHNS--------KRPPPKFSFP--N 263
BLAST of CcUC06G120860 vs. ExPASy TrEMBL
Match:
A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1)
HSP 1 Score: 138.3 bits (347), Expect = 4.7e-29
Identity = 78/207 (37.68%), Postives = 115/207 (55.56%), Query Frame = 0
Query: 1 SNVASLPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQVQS 60
S + ++P++ Q L +KL + NY++WK QLLN+++ GLE F+DG+ PP+FL+PQQ QS
Sbjct: 39 SPLPNMPSINQPLAVKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQS 98
Query: 61 ----HTYK--------LVLCSFNENKLGEIMGFGIAFEIWEA------------------ 120
H+++ + S NE+ LG+I+G+ A +IWEA
Sbjct: 99 NPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRT 158
Query: 121 -------------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQN- 151
RH+ N ++IGEP++Y DHL Y L LG +YNPFVTSIQ+
Sbjct: 159 ALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQ 218
BLAST of CcUC06G120860 vs. ExPASy TrEMBL
Match:
A0A7J0GPN0 (UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4 SV=1)
HSP 1 Score: 136.7 bits (343), Expect = 1.4e-28
Identity = 98/296 (33.11%), Postives = 143/296 (48.31%), Query Frame = 0
Query: 1 SNVASLPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQVQS 60
S + ++P++ Q L +KL + NY++WK QLLN+++ GLE F+DG+ PP+FL+PQQ QS
Sbjct: 39 SPLLNMPSINQPLAVKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQS 98
Query: 61 ----HTYK--------LVLCSFNENKLGEIMGFGIAFEIWEA------------------ 120
H+++ + S NE+ LG+I+G+ A +IWEA
Sbjct: 99 NPEFHSWQRYNRLVMSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHLTELRT 158
Query: 121 -------------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQNH 180
RH+ N ++IGEP++Y DHL Y L LG +YNPFVTSIQ+
Sbjct: 159 ALQTIKKEGLTALAYIQKFRHLCNSLASIGEPVTYTDHLIYFLGGLGRDYNPFVTSIQSQ 218
Query: 181 VKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQFPIPQTN-F 240
A +E+ T+ P++ +F P TN F
Sbjct: 219 ------AIRPSVEEPTS-------------------------PTSLTRKPKFKNPSTNSF 278
Query: 241 SNPGMPTSFTSFPPSRSPRPSLGSQNWPSPQPSNRPQCQICNKLGHAALTCYNLDN 247
N ++ S P ++ PS S N SP+P RP+CQIC K GH A CY+ N
Sbjct: 279 PN----SNSYSHPRGQNRNPSY-SPNPSSPKP--RPRCQICLKPGHTANKCYHHTN 296
BLAST of CcUC06G120860 vs. ExPASy TrEMBL
Match:
A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1)
HSP 1 Score: 133.7 bits (335), Expect = 1.1e-27
Identity = 97/279 (34.77%), Postives = 136/279 (48.75%), Query Frame = 0
Query: 6 LPTLTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEP-QQVQSHTY- 65
LP++ Q TIKL NYL+WKNQLLN+I+ GLE FIDG+ P PP+F +P +Q+ + Y
Sbjct: 45 LPSMNQPFTIKLDADNYLIWKNQLLNVIIANGLEDFIDGSRPCPPRFTDPARQIVNAEYI 104
Query: 66 ----------KLVLCSFNENKLGEIMGFGIAFEIWEA----------------------- 125
+ S + +G+I+G+ AFEIWEA
Sbjct: 105 AWQRFNRLIMSWIYASLTQGVMGQIVGYASAFEIWEALNQIYTSSSLAKITELRAKLQNL 164
Query: 126 --------------RHVANKFSAIGEPLSYRDHLGYILEWLGNEYNPFVTSIQ------- 185
+++ N +A+GEP+S +DHL Y+ L EYN FVTSI
Sbjct: 165 RKDGLTAIEYIQKHKNICNTLAAVGEPVSCKDHLLYLFGGLDREYNAFVTSITKRPDNLP 224
Query: 186 -NHVKSLLIAYEARLEKQTAMDQLNFIQANLAHVSFGQNSCRAAWPSTSKSPTQFPIPQT 227
+ SLL++YE RLE Q A QL+ +QANLAH++ + R P+ S F
Sbjct: 225 LEEIYSLLLSYEFRLESQNASAQLSSLQANLAHLNINKKPYR---PNFSNPVGHF---TQ 284
BLAST of CcUC06G120860 vs. ExPASy TrEMBL
Match:
A0A438DGT2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3179 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 5.0e-23
Identity = 91/279 (32.62%), Postives = 142/279 (50.90%), Query Frame = 0
Query: 1 SNVASLPT---LTQSLTIKLSNTNYLLWKNQLLNLIMGYGLESFIDGTSPQPPKFLEPQQ 60
S++AS+P+ L SL +KL TNY+LW++Q+ N+I G E FIDGTS P K L P +
Sbjct: 18 SSMASIPSYQMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEKELRPGE 77
Query: 61 V-------QSHTYKLVLCSFNENKLGEIMGFGIAFEIWEARHVANKFSAIGEPLSYRDHL 120
+ + ++ S + + G + + I + + A+ +AIGEP+S +D +
Sbjct: 78 INPAFVAWRRQDRTILSGSIHRSHQGSM---SMIDYIMKVKGAADSLAAIGEPVSEQDQI 137
Query: 121 GYILEWLGNEYNPFVTSIQ--------NHVKSLLIAYEARLEKQTAMDQLNFIQANLAHV 180
+L LG++YN VT+I V S+L+A+E RLE+Q +++QL + AN A
Sbjct: 138 MNLLGGLGSDYNAVVTAINIREDKISLEAVHSMLLAFEQRLEQQGSIEQLPAMSANYASS 197
Query: 181 SFGQNSCRAAWPSTSKSPTQFPIPQTNFSNPGMPTSFTSFPPSRSPRPSLGSQNWPSPQP 240
S + R + + P F + +NF G + G QN+ S
Sbjct: 198 SSNRGGGRKY--NGGRRP-NFMMTNSNFRGRGRGGRY----------GQNGRQNFSS--- 257
Query: 241 SNRPQCQICNKLGHAALTCYNLDNPKCNLTIKLTFQNNT 262
S RPQCQ+C K GH CY+ + ++T + T QNNT
Sbjct: 258 SERPQCQLCGKFGHTVQVCYH----RFDITFQST-QNNT 272
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022155181.1 | 4.9e-41 | 37.46 | uncharacterized protein LOC111022315 [Momordica charantia] | [more] |
GFY85402.1 | 9.6e-29 | 37.68 | hypothetical protein Acr_04g0001400 [Actinidia rufa] | [more] |
GFZ12741.1 | 2.8e-28 | 33.11 | UBX domain-containing protein [Actinidia rufa] | [more] |
PON47862.1 | 2.4e-27 | 34.77 | hypothetical protein TorRG33x02_321990 [Trema orientale] | [more] |
XP_038891713.1 | 6.5e-25 | 47.88 | uncharacterized protein LOC120081111 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Q9ZT94 | 1.4e-09 | 23.62 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 2.7e-05 | 20.79 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DQX7 | 2.4e-41 | 37.46 | uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A7J0EGI5 | 4.7e-29 | 37.68 | Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1 | [more] |
A0A7J0GPN0 | 1.4e-28 | 33.11 | UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4... | [more] |
A0A2P5BGF8 | 1.1e-27 | 34.77 | Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV... | [more] |
A0A438DGT2 | 5.0e-23 | 32.62 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976... | [more] |
Match Name | E-value | Identity | Description | |