CcUC06G119900 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G119900
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	RNA helicase
Location	CicolChr06: 20196147 .. 20199449 (+)
RNA-Seq Expression	CcUC06G119900
Synteny	CcUC06G119900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGACTTTCAAATTGAACCAACCGTTTCCAACTCTTTCACAGAACACGGCTGCTGGGTGTGTCGGCCAGCGTCGAGAGAGAAAGCAGAGGCGCCCTTACGGGGAGAGAGCAGACGGGAGAAAGCAATAGGGTTTACATTAAACTCTGTCCACCGGACCACCACCCCTCGCGACCTCTCATTCACCTGCCCCCTCGCCTTTCTCCTCCCTCAGACTGGCGGTATCGAATTTTTTTCAGTAATTTCTTTGGTTTGTGGTCTTTCTTTTATCGTCTCTCTTTCCTTCTTTTTGCTTGATATTCTCCACCGTTGCCCTCTTTCCCAATTTGTTTGATTCGAAATTTTGTTAACTGCATTTCCGCCCTGTTTTCTTAACTGTGAATTGTGATTGATCTGGTGGTTTAATATTCAGTGAGGTTATGTTACTATTTAACTCATGTTACTAGCTCTCTTTAAGTTAACTTCTTGTTTTCTGTCTTTGTTCAAGAAGCCAAATCTGGAAACAGGCTTAAGTTGTTAAAATGTGAAAACCAAATCCGGGTTATACTCTAATGTGCAGCGTTATGAGCCCAACATTGCAACCCAACTTGTTTGGTTTTGTTAAAACTAGTTTTTTTTTTTTTTCGTTAATTGTATTAATATAAATAGTTTGGTTCTGTTTACATGTATGGCAGACCGAAGAACATGATCTTTTTATTCTGTTAACAACTGAAGTGAAGCATATACTACCCTTGATTTCTGGTAAGTGGTAATATTGAGACGTTTGAACCTAAGTTTGAAATTTTTGATTATGAGATTGAAATATTTTTTTTGGTGTTCAAAATATGGCTGTGCTGGTTTAGTTTTGGTTATTTTAATTTTTACGTCTTGAAAATTTGAATTTTCAATCCAGATTGGCAACTTCGCAATTAAACAATGGTCAGAGGCCCTGCAACTACTCTTTTAAGGATTTCCTCTTCAAGAAAATGTGCCTCTGGGTTTAGGATTTTTACAAAGAACCGATTGCTACATTCTGGTGGGCAATATGACGATCACAAAGTTCTCCAAAGTAATCCAGTGCGTCCTTTCTCAAGCATTGTGAACCAAGTTTGGTTTAGATTGCTTTCTCAGAGGTTAAGGTTTGGAGGTATTTGTAGTTTCAATGTGAGACTATTCTCATTCATTGGGAAGAACAAGGAGGATAATGAAAATGGTGATAGTGTAAGCAGTTTAAATGTGGTAGAAGTTGGGGGTTATGATGCAGATGTTGGAAAAAATGTTCGCTTTGAGAACAATACTTGTGATTCGACGATGGTTACTGTTGGGGATGAATGCATTGGGGACAGTATTTGTGGTTCCATTGTGGATGATACAGTAAATGGTGATAATGACCTAAGGTCATTGAAACTGAGGAGCTATGAGAACTTCAGATCATGTGATCCTGTTGAATTATACCGTGAGCTTTGTATTGTTGAAAAGGGTGGTGCAAACGTAGACCATTCTGATTGGTTAACTCTTCAAGAGATATTTGGCTATTTTGTTAAATCTGGTTGGGCTAGGAATCAGGCTCTTGGTATTTATATTGGCATGTCATTTTTTCCGACGGCTGTACATAAGTTTCGAAGCTTTTTCTTTAAGAAATGTTCTACTGACGTTGTCAAATATTTGGTGTTTCTTGGTCCTTCAGACGATGCAGTCAAATTCCTTTTTCCAATATTTGTTGAATATTGTTTAGAAGAGTTTCCAGATGAGATTAGGCGGTTTCAAAGTATGGTTGATTCAGCTGATCTTACTAAGCCACACACTTGGTTTCCATTCGCACGAGCAATGAAGCGTAAAATTATATATCATTGTGGTCCAACTAATAGCGGTAAAACTTACAATGCTTTGCAGAGGTTTATGGAAGCAAAAAAGGGGATTTATTGCAGTCCTCTTAGGTTATTGGCCATGGAAGTGTTTGATAAGGTGAATGCTCATGGAGTTTATTGTAGCCTTCTTACAGGTCAAGAAAAGAAGCTTGTACCATTTTCTAGTCATACCGCCTGTACAGTTGAAATGGTGTCAACAGAGGAGTTGTATGAGGTTGCTGTTGTTGATGAGATTCAGATGATGTCAGATCCTTGTAGAGGATATGCGTGGACAAGGGCCTTGCTTGGATTGAAAGCTGATGAAATCCACTTATGTGGGGATCCTAGTGTTCTAAATGTTGTTCGAAAGATCTGTTCAGAAACTGGGGATGAGTTGCATGAACAACACTATGAGAGGTTTAAGCCATTGGTTGTTGAAGCTAAAACACTTCTAGGTGATCTTAAAAATGTTAGATCTGGTGATTGTATCGTTGCCTTTTCAAGAAGGGAGATATTTGAGGTTAAGTTGGTTATTGAGAAACTCACCAAACATCGATGTTGTGTTGTTTATGGAGCTTTACCACCAGAGACTCGAAGACACCAAGCAAATTTGTTTAATGATCAGGATAATGAATTTGATATTCTTGTCGCTAGTGATGCAGTGGGAATGGGTCTAAATCTTAATATTAGGAGAGTTGTGTTTTACAACCTTGCAAAGTACGATGGGAACAAGGTTGTGCCTGTTCCTGCTTCACAAGTTAAGCAGATTGCTGGAAGAGCAGGGCGCAGAGGAAGTCGCTATCCAGATGGACTTGCAACCACATTACATTTAGAGGATCTGGATTACTTGATTGAATGTTTGAAACAACCCTTCGATGATGTTAAGAAAATTGGTCTCTTTCCTTACTTTGAGCAAATTGAGCTATTTGCAGGGCAAGTCTCTAATGTTACATTCTGCCAACTATTGACAAAATTTAGTGAAAATTGTCGCCTAGATGGTTCTTACTTTTTGTGTCAGCATGACCATATAAAGAAAGTTGCAAACATGTTAGAGAAGGTCCCAGGATTATCTCTAGAAGATCGTTTTAACTTTTGTTTTGCCCCTGTTAATGTTAGAGATCCGAAGGCAATGTACCATCTTTTGAGGTTTGCTTCATCATATAGTTGCAATGTTCCTGTGAACATTGCAATGGGCATGCCAAAGGGCTCTGCTCGGAATGATTTGGAGCTATTGGATCTTGAAACGAAGCATCAAGTATTGTCGATGTACCTTTGGCTATCACAGCACTTCAAGGAAGAAACTTTTCCTTATGTCAAGAAGGTTGAGGTGATGGCAATAGATATTGCTGATTTATTAGGTCAATCTTTGACAAAAGCTAATTGGAAACCAGAATCAAGGCAAGCTAGGAAACCTAAGCCTCAGGACAAAGAAGGCCATGAAAAGCCCAGGTCTCCCGTGGGAGTGTATGAGAAGCAA

mRNA sequence

GTTTGACTTTCAAATTGAACCAACCGTTTCCAACTCTTTCACAGAACACGGCTGCTGGGTGTGTCGGCCAGCGTCGAGAGAGAAAGCAGAGGCGCCCTTACGGGGAGAGAGCAGACGGGAGAAAGCAATAGGGTTTACATTAAACTCTGTCCACCGGACCACCACCCCTCGCGACCTCTCATTCACCTGCCCCCTCGCCTTTCTCCTCCCTCAGACTGGCGAGGCCCTGCAACTACTCTTTTAAGGATTTCCTCTTCAAGAAAATGTGCCTCTGGGTTTAGGATTTTTACAAAGAACCGATTGCTACATTCTGGTGGGCAATATGACGATCACAAAGTTCTCCAAAGTAATCCAGTGCGTCCTTTCTCAAGCATTGTGAACCAAGTTTGGTTTAGATTGCTTTCTCAGAGGTTAAGGTTTGGAGGTATTTGTAGTTTCAATGTGAGACTATTCTCATTCATTGGGAAGAACAAGGAGGATAATGAAAATGGTGATAGTGTAAGCAGTTTAAATGTGGTAGAAGTTGGGGGTTATGATGCAGATGTTGGAAAAAATGTTCGCTTTGAGAACAATACTTGTGATTCGACGATGGTTACTGTTGGGGATGAATGCATTGGGGACAGTATTTGTGGTTCCATTGTGGATGATACAGTAAATGGTGATAATGACCTAAGGTCATTGAAACTGAGGAGCTATGAGAACTTCAGATCATGTGATCCTGTTGAATTATACCGTGAGCTTTGTATTGTTGAAAAGGGTGGTGCAAACGTAGACCATTCTGATTGGTTAACTCTTCAAGAGATATTTGGCTATTTTGTTAAATCTGGTTGGGCTAGGAATCAGGCTCTTGGTATTTATATTGGCATGTCATTTTTTCCGACGGCTGTACATAAGTTTCGAAGCTTTTTCTTTAAGAAATGTTCTACTGACGTTGTCAAATATTTGGTGTTTCTTGGTCCTTCAGACGATGCAGTCAAATTCCTTTTTCCAATATTTGTTGAATATTGTTTAGAAGAGTTTCCAGATGAGATTAGGCGGTTTCAAAGTATGGTTGATTCAGCTGATCTTACTAAGCCACACACTTGGTTTCCATTCGCACGAGCAATGAAGCGTAAAATTATATATCATTGTGGTCCAACTAATAGCGGTAAAACTTACAATGCTTTGCAGAGGTTTATGGAAGCAAAAAAGGGGATTTATTGCAGTCCTCTTAGGTTATTGGCCATGGAAGTGTTTGATAAGGTGAATGCTCATGGAGTTTATTGTAGCCTTCTTACAGGTCAAGAAAAGAAGCTTGTACCATTTTCTAGTCATACCGCCTGTACAGTTGAAATGGTGTCAACAGAGGAGTTGTATGAGGTTGCTGTTGTTGATGAGATTCAGATGATGTCAGATCCTTGTAGAGGATATGCGTGGACAAGGGCCTTGCTTGGATTGAAAGCTGATGAAATCCACTTATGTGGGGATCCTAGTGTTCTAAATGTTGTTCGAAAGATCTGTTCAGAAACTGGGGATGAGTTGCATGAACAACACTATGAGAGGTTTAAGCCATTGGTTGTTGAAGCTAAAACACTTCTAGGTGATCTTAAAAATGTTAGATCTGGTGATTGTATCGTTGCCTTTTCAAGAAGGGAGATATTTGAGGTTAAGTTGGTTATTGAGAAACTCACCAAACATCGATGTTGTGTTGTTTATGGAGCTTTACCACCAGAGACTCGAAGACACCAAGCAAATTTGTTTAATGATCAGGATAATGAATTTGATATTCTTGTCGCTAGTGATGCAGTGGGAATGGGTCTAAATCTTAATATTAGGAGAGTTGTGTTTTACAACCTTGCAAAGTACGATGGGAACAAGGTTGTGCCTGTTCCTGCTTCACAAGTTAAGCAGATTGCTGGAAGAGCAGGGCGCAGAGGAAGTCGCTATCCAGATGGACTTGCAACCACATTACATTTAGAGGATCTGGATTACTTGATTGAATGTTTGAAACAACCCTTCGATGATGTTAAGAAAATTGGTCTCTTTCCTTACTTTGAGCAAATTGAGCTATTTGCAGGGCAAGTCTCTAATGTTACATTCTGCCAACTATTGACAAAATTTAGTGAAAATTGTCGCCTAGATGGTTCTTACTTTTTGTGTCAGCATGACCATATAAAGAAAGTTGCAAACATGTTAGAGAAGGTCCCAGGATTATCTCTAGAAGATCGTTTTAACTTTTGTTTTGCCCCTGTTAATGTTAGAGATCCGAAGGCAATGTACCATCTTTTGAGGTTTGCTTCATCATATAGTTGCAATGTTCCTGTGAACATTGCAATGGGCATGCCAAAGGGCTCTGCTCGGAATGATTTGGAGCTATTGGATCTTGAAACGAAGCATCAAGTATTGTCGATGTACCTTTGGCTATCACAGCACTTCAAGGAAGAAACTTTTCCTTATGTCAAGAAGGTTGAGGTGATGGCAATAGATATTGCTGATTTATTAGGTCAATCTTTGACAAAAGCTAATTGGAAACCAGAATCAAGGCAAGCTAGGAAACCTAAGCCTCAGGACAAAGAAGGCCATGAAAAGCCCAGGTCTCCCGTGGGAGTGTATGAGAAGCAA

Coding sequence (CDS)

ATGGTTACTGTTGGGGATGAATGCATTGGGGACAGTATTTGTGGTTCCATTGTGGATGATACAGTAAATGGTGATAATGACCTAAGGTCATTGAAACTGAGGAGCTATGAGAACTTCAGATCATGTGATCCTGTTGAATTATACCGTGAGCTTTGTATTGTTGAAAAGGGTGGTGCAAACGTAGACCATTCTGATTGGTTAACTCTTCAAGAGATATTTGGCTATTTTGTTAAATCTGGTTGGGCTAGGAATCAGGCTCTTGGTATTTATATTGGCATGTCATTTTTTCCGACGGCTGTACATAAGTTTCGAAGCTTTTTCTTTAAGAAATGTTCTACTGACGTTGTCAAATATTTGGTGTTTCTTGGTCCTTCAGACGATGCAGTCAAATTCCTTTTTCCAATATTTGTTGAATATTGTTTAGAAGAGTTTCCAGATGAGATTAGGCGGTTTCAAAGTATGGTTGATTCAGCTGATCTTACTAAGCCACACACTTGGTTTCCATTCGCACGAGCAATGAAGCGTAAAATTATATATCATTGTGGTCCAACTAATAGCGGTAAAACTTACAATGCTTTGCAGAGGTTTATGGAAGCAAAAAAGGGGATTTATTGCAGTCCTCTTAGGTTATTGGCCATGGAAGTGTTTGATAAGGTGAATGCTCATGGAGTTTATTGTAGCCTTCTTACAGGTCAAGAAAAGAAGCTTGTACCATTTTCTAGTCATACCGCCTGTACAGTTGAAATGGTGTCAACAGAGGAGTTGTATGAGGTTGCTGTTGTTGATGAGATTCAGATGATGTCAGATCCTTGTAGAGGATATGCGTGGACAAGGGCCTTGCTTGGATTGAAAGCTGATGAAATCCACTTATGTGGGGATCCTAGTGTTCTAAATGTTGTTCGAAAGATCTGTTCAGAAACTGGGGATGAGTTGCATGAACAACACTATGAGAGGTTTAAGCCATTGGTTGTTGAAGCTAAAACACTTCTAGGTGATCTTAAAAATGTTAGATCTGGTGATTGTATCGTTGCCTTTTCAAGAAGGGAGATATTTGAGGTTAAGTTGGTTATTGAGAAACTCACCAAACATCGATGTTGTGTTGTTTATGGAGCTTTACCACCAGAGACTCGAAGACACCAAGCAAATTTGTTTAATGATCAGGATAATGAATTTGATATTCTTGTCGCTAGTGATGCAGTGGGAATGGGTCTAAATCTTAATATTAGGAGAGTTGTGTTTTACAACCTTGCAAAGTACGATGGGAACAAGGTTGTGCCTGTTCCTGCTTCACAAGTTAAGCAGATTGCTGGAAGAGCAGGGCGCAGAGGAAGTCGCTATCCAGATGGACTTGCAACCACATTACATTTAGAGGATCTGGATTACTTGATTGAATGTTTGAAACAACCCTTCGATGATGTTAAGAAAATTGGTCTCTTTCCTTACTTTGAGCAAATTGAGCTATTTGCAGGGCAAGTCTCTAATGTTACATTCTGCCAACTATTGACAAAATTTAGTGAAAATTGTCGCCTAGATGGTTCTTACTTTTTGTGTCAGCATGACCATATAAAGAAAGTTGCAAACATGTTAGAGAAGGTCCCAGGATTATCTCTAGAAGATCGTTTTAACTTTTGTTTTGCCCCTGTTAATGTTAGAGATCCGAAGGCAATGTACCATCTTTTGAGGTTTGCTTCATCATATAGTTGCAATGTTCCTGTGAACATTGCAATGGGCATGCCAAAGGGCTCTGCTCGGAATGATTTGGAGCTATTGGATCTTGAAACGAAGCATCAAGTATTGTCGATGTACCTTTGGCTATCACAGCACTTCAAGGAAGAAACTTTTCCTTATGTCAAGAAGGTTGAGGTGATGGCAATAGATATTGCTGATTTATTAGGTCAATCTTTGACAAAAGCTAATTGGAAACCAGAATCAAGGCAAGCTAGGAAACCTAAGCCTCAGGACAAAGAAGGCCATGAAAAGCCCAGGTCTCCCGTGGGAGTGTATGAGAAGCAA

Protein sequence

MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGANVDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLVFLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFSSHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKLTKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDRFNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLSMYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEKPRSPVGVYEKQ

Homology

[Close]

BLAST of CcUC06G119900 vs. NCBI nr
Match: XP_038907113.1 (DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Benincasa hispida])

HSP 1 Score: 1265.0 bits (3272), Expect = 0.0e+00
Identity = 613/671 (91.36%), Postives = 634/671 (94.49%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           MV  GDECIGD I GSIVDD+ NGDNDLRSLKLRSYEN RSCDPVELYREL  VE  GA 
Sbjct: 126 MVPGGDECIGDGIHGSIVDDSKNGDNDLRSLKLRSYENIRSCDPVELYRELRSVEMDGAK 185

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
           V+ S+WLTLQEIF YF+ SGWA NQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV
Sbjct: 186 VERSEWLTLQEIFSYFITSGWASNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 245

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMV SADLTKPHTWFPFARAMKRKIIYH
Sbjct: 246 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVASADLTKPHTWFPFARAMKRKIIYH 305

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSL TGQEKK VPFS
Sbjct: 306 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLFTGQEKKHVPFS 365

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           +H+ACTVEM+STEELYEVAVVDEIQMMSDP RGYAWTRA LGLKADEIHLCGDPSVLNVV
Sbjct: 366 NHSACTVEMLSTEELYEVAVVDEIQMMSDPYRGYAWTRAFLGLKADEIHLCGDPSVLNVV 425

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHE+ YERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 426 RKICSETGDELHERRYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLAIEKL 485

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YGALPPETRRHQANLFNDQDNEFD+LVASDAVGMGLNLNIRRVVFYNLAKY+
Sbjct: 486 TKHRCCVIYGALPPETRRHQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYNLAKYN 545

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+K+VPVPASQVKQIAGRAGRRGS YPDGL TTL+ +DL YLIECLKQPFDDVKKIGLFP
Sbjct: 546 GDKMVPVPASQVKQIAGRAGRRGSCYPDGLTTTLNFDDLGYLIECLKQPFDDVKKIGLFP 605

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
           +FEQ+ELFAGQVSNVTFCQ+L KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSLEDR
Sbjct: 606 FFEQLELFAGQVSNVTFCQILEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDR 665

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFAS YS N+PVN AMGMPKGSARND ELLDLETKHQVLS
Sbjct: 666 FNFCFAPVNVRDPKAMYHLLRFASLYSQNIPVNTAMGMPKGSARNDTELLDLETKHQVLS 725

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEE FP+VKKVE MA DIADLLGQSLTKANWKPESRQA KPKPQDKEGHEK
Sbjct: 726 MYLWLSQHFKEENFPHVKKVEAMAKDIADLLGQSLTKANWKPESRQAGKPKPQDKEGHEK 785

Query: 661 PRSPVGVYEKQ 672
           PRSPV VYEKQ
Sbjct: 786 PRSPVRVYEKQ 796

[Close]

BLAST of CcUC06G119900 vs. NCBI nr
Match: XP_023514781.1 (DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023514782.1 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1250.3 bits (3234), Expect = 0.0e+00
Identity = 605/671 (90.16%), Postives = 634/671 (94.49%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           M+T GD+C   SICG+IVDD+ NG NDLRS KLR+YE  R  DPVELYREL  V +GGA 
Sbjct: 127 MITGGDDCSEGSICGTIVDDSKNGGNDLRSSKLRNYETIRLSDPVELYRELRGVGRGGAK 186

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
            + S+WLTLQEIF YF KSGWA NQALGIYIG+SFFPTAVHKF+SFFFKKCSTDVVKYLV
Sbjct: 187 PEQSEWLTLQEIFRYFAKSGWASNQALGIYIGLSFFPTAVHKFQSFFFKKCSTDVVKYLV 246

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPS+DAVKFLFPIFVEYCLEEFPDEIRRF+SMVDSADLTKPHTWFPFARAMKRKIIYH
Sbjct: 247 FLGPSNDAVKFLFPIFVEYCLEEFPDEIRRFRSMVDSADLTKPHTWFPFARAMKRKIIYH 306

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS
Sbjct: 307 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 366

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVST+E+YEVAVVDEIQMMSD  RGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 367 SHIACTVEMVSTDEMYEVAVVDEIQMMSDSYRGYAWTRALLGLKADEIHLCGDPSVLNVV 426

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHEQHY RFKPLVVEAKTLLGDL+NVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 427 RKICSETGDELHEQHYGRFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREIFEVKLAIEKL 486

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YGALPPETRRHQANLFNDQD+EFD+LVASDA+GMGLNLNIRRVVFYNLAKY+
Sbjct: 487 TKHRCCVIYGALPPETRRHQANLFNDQDSEFDVLVASDALGMGLNLNIRRVVFYNLAKYN 546

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+KVVPVPASQVKQIAGRAGRRGSRYPDGL TTL+L+DLDYLIECLKQPFDDV+KIGLFP
Sbjct: 547 GDKVVPVPASQVKQIAGRAGRRGSRYPDGLTTTLNLDDLDYLIECLKQPFDDVQKIGLFP 606

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
            FEQ+ELFAGQVSNVTFCQLL KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSL DR
Sbjct: 607 CFEQVELFAGQVSNVTFCQLLEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLADR 666

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFASSYS NVPVNIAMGMPKGSARND+ELLDLETKHQVLS
Sbjct: 667 FNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVNIAMGMPKGSARNDMELLDLETKHQVLS 726

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKK +VMA DIADLLGQSLTKANWKPESRQA KPK Q KEGHEK
Sbjct: 727 MYLWLSQHFKEETFPYVKKAKVMATDIADLLGQSLTKANWKPESRQAGKPKSQSKEGHEK 786

Query: 661 PRSPVGVYEKQ 672
           PRSPV +YEKQ
Sbjct: 787 PRSPVSLYEKQ 797

[Close]

BLAST of CcUC06G119900 vs. NCBI nr
Match: XP_022964491.1 (DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita moschata] >XP_022964493.1 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita moschata] >XP_022964494.1 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita moschata] >XP_022964495.1 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita moschata])

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 603/671 (89.87%), Postives = 632/671 (94.19%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           M+T GD+C   SICG+IVDD+ NG +DLRS KLR+YE  R  DPVELYREL  V +G A 
Sbjct: 127 MITGGDDCSEGSICGTIVDDSKNGGDDLRSSKLRNYETIRLSDPVELYRELRGVGRGSAK 186

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
            + S+WLTLQEIF YF KSGWA NQALGIYIG+SFFPTAVHKF+SFFFKKCSTDVVKYLV
Sbjct: 187 PEQSEWLTLQEIFRYFAKSGWASNQALGIYIGLSFFPTAVHKFQSFFFKKCSTDVVKYLV 246

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPS+DAVKFLFPIFVEYCLEEFPDEIRRF+SMVDSADLTKPHTWFPFARAMKRKIIYH
Sbjct: 247 FLGPSNDAVKFLFPIFVEYCLEEFPDEIRRFRSMVDSADLTKPHTWFPFARAMKRKIIYH 306

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS
Sbjct: 307 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 366

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVST+E+YEVAVVDEIQMMSD  RGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 367 SHIACTVEMVSTDEMYEVAVVDEIQMMSDSYRGYAWTRALLGLKADEIHLCGDPSVLNVV 426

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHEQHY RFKPLVVEAKTLLGDL+NVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 427 RKICSETGDELHEQHYGRFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREIFEVKLAIEKL 486

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YGALPPETRRHQANLFNDQ +EFD+LVASDA+GMGLNLNIRRVVFYNLAKY+
Sbjct: 487 TKHRCCVIYGALPPETRRHQANLFNDQHSEFDVLVASDALGMGLNLNIRRVVFYNLAKYN 546

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+KVVPVPASQVKQIAGRAGRRGSRYPDGL TTL+L+DLDYLIECLKQPFDDV+KIGLFP
Sbjct: 547 GDKVVPVPASQVKQIAGRAGRRGSRYPDGLTTTLNLDDLDYLIECLKQPFDDVQKIGLFP 606

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
            FEQ+ELFAGQVSNVTFCQLL KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSL DR
Sbjct: 607 CFEQVELFAGQVSNVTFCQLLEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLADR 666

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFASSYS NVPVNIAMGMPKGSARND+ELLDLETKHQVLS
Sbjct: 667 FNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVNIAMGMPKGSARNDMELLDLETKHQVLS 726

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKK EVMA DIADLLGQSLTKANWKPESRQA KPK Q KEGHEK
Sbjct: 727 MYLWLSQHFKEETFPYVKKAEVMATDIADLLGQSLTKANWKPESRQAGKPKSQSKEGHEK 786

Query: 661 PRSPVGVYEKQ 672
           PRSPV +YEKQ
Sbjct: 787 PRSPVSLYEKQ 797

[Close]

BLAST of CcUC06G119900 vs. NCBI nr
Match: XP_022999869.1 (DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita maxima] >XP_022999870.1 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita maxima] >XP_022999871.1 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita maxima] >XP_022999872.1 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1243.0 bits (3215), Expect = 0.0e+00
Identity = 602/671 (89.72%), Postives = 631/671 (94.04%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           M+T GD+C   SICG+IVDD+ NG +DLRS KLR+YE  R  DPVELYREL  V +G A 
Sbjct: 127 MITGGDDCSEGSICGTIVDDSKNGGDDLRSSKLRNYETIRLSDPVELYRELRSVGRGSAK 186

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
            + S+WLTLQEIF YF KSGWA NQALGIYIG+SFF TAVHKF+SFFFKKCSTDV+KYLV
Sbjct: 187 PEQSEWLTLQEIFRYFAKSGWASNQALGIYIGLSFFQTAVHKFQSFFFKKCSTDVMKYLV 246

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPS+DAVKFLFPIFVEYCLEEFPDEIRRF+SMVDSADLTKPHTWFPFARAMKRKIIYH
Sbjct: 247 FLGPSNDAVKFLFPIFVEYCLEEFPDEIRRFRSMVDSADLTKPHTWFPFARAMKRKIIYH 306

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKK VPFS
Sbjct: 307 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKRVPFS 366

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVST+E+YEVAVVDEIQMMSD  RGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 367 SHIACTVEMVSTDEMYEVAVVDEIQMMSDSYRGYAWTRALLGLKADEIHLCGDPSVLNVV 426

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHEQHYERFKPLVVEAKTLLGDL+NVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 427 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREIFEVKLAIEKL 486

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YGALPPETRRHQANLFNDQ +EFD+LVASDA+GMGLNLNIRRVVFYNLAKY+
Sbjct: 487 TKHRCCVIYGALPPETRRHQANLFNDQHSEFDVLVASDALGMGLNLNIRRVVFYNLAKYN 546

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+KVVPVPASQVKQIAGRAGRRGSRYPDGL TTL+L+DLDYLIECLKQPFDDV+KIGLFP
Sbjct: 547 GDKVVPVPASQVKQIAGRAGRRGSRYPDGLTTTLNLDDLDYLIECLKQPFDDVQKIGLFP 606

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
            FEQ+ELFAGQVSNVTFCQLL KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSLEDR
Sbjct: 607 CFEQVELFAGQVSNVTFCQLLEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDR 666

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFASSYS NVPVNIAMGMPKGSARND ELLDLETKHQVLS
Sbjct: 667 FNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVNIAMGMPKGSARNDTELLDLETKHQVLS 726

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKK EVMA DIADLLGQSLTKANWKPESRQA KPK Q KEGHEK
Sbjct: 727 MYLWLSQHFKEETFPYVKKAEVMATDIADLLGQSLTKANWKPESRQAGKPKSQSKEGHEK 786

Query: 661 PRSPVGVYEKQ 672
           PRSPV +YEKQ
Sbjct: 787 PRSPVSLYEKQ 797

[Close]

BLAST of CcUC06G119900 vs. NCBI nr
Match: KAG7025996.1 (DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 602/671 (89.72%), Postives = 631/671 (94.04%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           M+T GD+C   SIC +IVDD+ NG +DLRS KLR+YE  R  DPVELYREL  V +G A 
Sbjct: 127 MITGGDDCSEGSICCTIVDDSENGGDDLRSSKLRNYETIRLSDPVELYRELRGVGRGSAK 186

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
            + S+WLTLQEIF YF KSGWA NQALGIYIG+SFFPTAVHKF+SFFFKKCSTDVVKYLV
Sbjct: 187 PEQSEWLTLQEIFRYFAKSGWASNQALGIYIGLSFFPTAVHKFQSFFFKKCSTDVVKYLV 246

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPS+DAVKFLFPIFVEYCLEEFPDEIRRF+SMVDSADLTKPHTWFPFARAMKRKIIYH
Sbjct: 247 FLGPSNDAVKFLFPIFVEYCLEEFPDEIRRFRSMVDSADLTKPHTWFPFARAMKRKIIYH 306

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS
Sbjct: 307 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 366

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVST+E+YEVAVVDEIQMMSD  RGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 367 SHIACTVEMVSTDEMYEVAVVDEIQMMSDSYRGYAWTRALLGLKADEIHLCGDPSVLNVV 426

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHEQHY RFKPLVVEAKTLLGDL+NVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 427 RKICSETGDELHEQHYGRFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREIFEVKLAIEKL 486

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YGALPPETRRHQANLFNDQ +EFD+LVASDA+GMGLNLNIRRVVFYNLAKY+
Sbjct: 487 TKHRCCVIYGALPPETRRHQANLFNDQHSEFDVLVASDALGMGLNLNIRRVVFYNLAKYN 546

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+KVVPVPASQVKQIAGRAGRRGSRYPDGL TTL+L+DLDYLIECLKQPFDDV+KIGLFP
Sbjct: 547 GDKVVPVPASQVKQIAGRAGRRGSRYPDGLTTTLNLDDLDYLIECLKQPFDDVQKIGLFP 606

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
            FEQ+ELFAGQVSNVTFCQLL KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSL DR
Sbjct: 607 CFEQVELFAGQVSNVTFCQLLEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLADR 666

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFASSYS NVPVNIAMGMPKGSARND+ELLDLETKHQVLS
Sbjct: 667 FNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVNIAMGMPKGSARNDMELLDLETKHQVLS 726

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKK EVMA DIADLLGQSLTKANWKPESRQA KPK Q KEGHEK
Sbjct: 727 MYLWLSQHFKEETFPYVKKAEVMATDIADLLGQSLTKANWKPESRQAGKPKSQSKEGHEK 786

Query: 661 PRSPVGVYEKQ 672
           PRSPV +YEKQ
Sbjct: 787 PRSPVSLYEKQ 797

[Close]

BLAST of CcUC06G119900 vs. ExPASy Swiss-Prot
Match: F4KFV7 (DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g39840 PE=3 SV=1)

HSP 1 Score: 1000.0 bits (2584), Expect = 1.3e-290
Identity = 476/656 (72.56%), Postives = 573/656 (87.35%), Query Frame = 0


Query: 17  IVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGANVDHSDWLTLQEIFGYF 76
           +++D+V  + D    +     N R  DPVELYREL   E   + + HS+W +L EIFG+F
Sbjct: 117 LLNDSVVAETDEIGSEAARALNDRYHDPVELYRELRGSEV-RSKLQHSEWDSLHEIFGFF 176

Query: 77  VKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLVFLGPSDDAVKFLFPIF 136
            +SGWA NQAL IYIG SFFPTAV KFR FF +KC  +VV+ LV +GP+D AVKFLFP+F
Sbjct: 177 AQSGWAANQALAIYIGKSFFPTAVSKFRDFFIEKCGIEVVQDLVRVGPTDVAVKFLFPVF 236

Query: 137 VEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRF 196
           VE+C+EEFPDEI+RF+S+VD+ADLTKP TWFPFARAMKRKI+YHCGPTNSGKTYNALQRF
Sbjct: 237 VEFCIEEFPDEIKRFKSIVDTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRF 296

Query: 197 MEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFSSHTACTVEMVSTEELY 256
           MEAK G+YCSPLRLLAMEVFDKVNA G+YCSLLTGQEKK VPF++H +CTVEMVST+ELY
Sbjct: 297 MEAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDELY 356

Query: 257 EVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQHY 316
           EVAV+DEIQMM+DP RG+AWT+ALLGLKADEIHLCGDPSVL++VRK+C++TGDEL E+HY
Sbjct: 357 EVAVLDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEHY 416

Query: 317 ERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKLTKHRCCVVYGALPPET 376
           ERFKPLVVEAKTLLG+LKNV+SGDC+VAFSRREIFEVK+ IEK T HRCCV+YGALPPET
Sbjct: 417 ERFKPLVVEAKTLLGELKNVKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPET 476

Query: 377 RRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIA 436
           RR QA LFNDQ+NE+D+LVASDAVGMGLNLNIRRVVFY+L KY+G+K+VPV ASQVKQIA
Sbjct: 477 RRQQAKLFNDQENEYDVLVASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQIA 536

Query: 437 GRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVT 496
           GRAGRRGSRYPDGL TTLHLEDL+YLIECL+QPFD+V K+GLFP+FEQIELFA QV ++ 
Sbjct: 537 GRAGRRGSRYPDGLTTTLHLEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDMA 596

Query: 497 FCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDRFNFCFAPVNVRDPKAM 556
           F  LL  F ++CRLDGSYFLC+HDH+KKVANMLEKV GLSLEDRFNFCFAPVN+R+P+AM
Sbjct: 597 FSNLLEHFGKHCRLDGSYFLCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRAM 656

Query: 557 YHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLSMYLWLSQHFKEETFPY 616
           ++L RFASSYS N+PVN+AMG+PK SA++D +LLDLE++HQ+LSMYLWLS  F EE FP+
Sbjct: 657 HNLYRFASSYSQNMPVNVAMGIPKSSAKSDAQLLDLESRHQILSMYLWLSNQF-EENFPF 716

Query: 617 VKKVEVMAIDIADLLGQSLTKANWKPESRQAR-KPKPQDKEGHEKPRSPVGVYEKQ 672
           V+KVE MA +IA+LLG+SL+KA+WK ES++ + K + ++  G+E+P S + + +K+
Sbjct: 717 VEKVEAMATNIAELLGESLSKASWKMESKEEKVKGQMKEDRGYERPASLIKLVKKR 770

[Close]

BLAST of CcUC06G119900 vs. ExPASy Swiss-Prot
Match: Q01IJ3 (ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.4 PE=3 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 2.9e-253
Identity = 419/619 (67.69%), Postives = 508/619 (82.07%), Query Frame = 0


Query: 43  DPVELYRELCIVE--KGGANVDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAV 102
           D  +L+RE+   E   G + +  + W  +  +   F K     +QAL +YI  S FPT  
Sbjct: 71  DGKQLWREVSTSEPATGASRLPKATWDAVVALLRRFGKDPAMSDQALALYIPASAFPTYA 130

Query: 103 HKFRSFFFKKCSTDVVKYLVFLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADL 162
            +FR F   + S +  ++L+ L P+DDA   L P F E+C+    DE+R+ +S++ +ADL
Sbjct: 131 RRFRHFLPARLSLESAEHLLSL-PADDAHALLLPAFAEFCVTHLADELRKHESVMAAADL 190

Query: 163 TKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVN 222
           T PH W+PFARAM+R+++YHCGPTNSGKT+NAL RF  AK G+YCSPLRLLAMEVFDKVN
Sbjct: 191 TAPHAWYPFARAMRRRVVYHCGPTNSGKTHNALTRFAAAKSGVYCSPLRLLAMEVFDKVN 250

Query: 223 AHGVYCSLLTGQEKKLVPFSSHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRAL 282
           A GVYCSL TGQE K VPFS+H ACT+EM+STEE YEVAVVDEIQMM+DP RGYAWTRA+
Sbjct: 251 ALGVYCSLRTGQEIKEVPFSNHVACTIEMLSTEEPYEVAVVDEIQMMADPVRGYAWTRAV 310

Query: 283 LGLKADEIHLCGDPSVLNVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGD 342
           LGLKADEIHLCGDPSVL +VRKIC++TGD+L    YERFKPLVVEAKTLLGDLKNVRSGD
Sbjct: 311 LGLKADEIHLCGDPSVLKIVRKICADTGDDLEVHQYERFKPLVVEAKTLLGDLKNVRSGD 370

Query: 343 CIVAFSRREIFEVKLVIEKLTKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAV 402
           CIVAFSRREIFEVKL IEK TKH+CCV+YGALPPETRR QA LFN+QDNE+D+LVASDAV
Sbjct: 371 CIVAFSRREIFEVKLAIEKFTKHKCCVIYGALPPETRRQQAKLFNEQDNEYDVLVASDAV 430

Query: 403 GMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLD 462
           GMGLNLNIRRVVFY+LAKY+G+++VPV ASQVKQIAGRAGRRGS YPDGL TT  L+DLD
Sbjct: 431 GMGLNLNIRRVVFYSLAKYNGDRMVPVAASQVKQIAGRAGRRGSIYPDGLTTTFLLDDLD 490

Query: 463 YLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHD 522
           YLI+CL+QPF++ KK+GLFP FEQ+E FA Q  ++TF +LL KF ENCR+D +YF+C  +
Sbjct: 491 YLIQCLQQPFEEAKKVGLFPCFEQVESFAIQFPDLTFNELLDKFRENCRVDSTYFMCHQE 550

Query: 523 HIKKVANMLEKVPGLSLEDRFNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPK 582
            IKKVANMLE++ GLSL+DR+NFCFAPVN+RDPKAMYHLLRFA++YS +  V+IAMGMPK
Sbjct: 551 SIKKVANMLERIQGLSLKDRYNFCFAPVNIRDPKAMYHLLRFATNYSQSRRVSIAMGMPK 610

Query: 583 GSARNDLELLDLETKHQVLSMYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANW 642
           GSA+ND ELLDLETKHQVLSMYLWLS HF+E+ FP+V+K E M+I+IADLL +SL KA+W
Sbjct: 611 GSAKNDTELLDLETKHQVLSMYLWLSHHFEEDHFPHVQKAEEMSINIADLLAKSLAKASW 670

Query: 643 KPESRQARKPKPQDKEGHE 660
           KP SRQ  KP+ +++E ++
Sbjct: 671 KPTSRQQAKPRRENEEDND 688

[Close]

BLAST of CcUC06G119900 vs. ExPASy Swiss-Prot
Match: Q7X745 (ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os04g38630 PE=2 SV=2)

HSP 1 Score: 875.9 bits (2262), Expect = 2.9e-253
Identity = 419/619 (67.69%), Postives = 508/619 (82.07%), Query Frame = 0


Query: 43  DPVELYRELCIVE--KGGANVDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAV 102
           D  +L+RE+   E   G + +  + W  +  +   F K     +QAL +YI  S FPT  
Sbjct: 71  DGKQLWREVSTSEPATGASRLPKATWDAVVALLRRFGKDPAMSDQALALYIPASAFPTYA 130

Query: 103 HKFRSFFFKKCSTDVVKYLVFLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADL 162
            +FR F   + S +  ++L+ L P+DDA   L P F E+C+    DE+R+ +S++ +ADL
Sbjct: 131 RRFRHFLPARLSLESAEHLLSL-PADDAHALLLPAFAEFCVTHLADELRKHESVMAAADL 190

Query: 163 TKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVN 222
           T PH W+PFARAM+R+++YHCGPTNSGKT+NAL RF  AK G+YCSPLRLLAMEVFDKVN
Sbjct: 191 TAPHAWYPFARAMRRRVVYHCGPTNSGKTHNALTRFAAAKSGVYCSPLRLLAMEVFDKVN 250

Query: 223 AHGVYCSLLTGQEKKLVPFSSHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRAL 282
           A GVYCSL TGQE K VPFS+H ACT+EM+STEE YEVAVVDEIQMM+DP RGYAWTRA+
Sbjct: 251 ALGVYCSLRTGQEIKEVPFSNHVACTIEMLSTEEPYEVAVVDEIQMMADPVRGYAWTRAV 310

Query: 283 LGLKADEIHLCGDPSVLNVVRKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGD 342
           LGLKADEIHLCGDPSVL +VRKIC++TGD+L    YERFKPLVVEAKTLLGDLKNVRSGD
Sbjct: 311 LGLKADEIHLCGDPSVLKIVRKICADTGDDLEVHQYERFKPLVVEAKTLLGDLKNVRSGD 370

Query: 343 CIVAFSRREIFEVKLVIEKLTKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAV 402
           CIVAFSRREIFEVKL IEK TKH+CCV+YGALPPETRR QA LFN+QDNE+D+LVASDAV
Sbjct: 371 CIVAFSRREIFEVKLAIEKFTKHKCCVIYGALPPETRRQQAKLFNEQDNEYDVLVASDAV 430

Query: 403 GMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLD 462
           GMGLNLNIRRVVFY+LAKY+G+++VPV ASQVKQIAGRAGRRGS YPDGL TT  L+DLD
Sbjct: 431 GMGLNLNIRRVVFYSLAKYNGDRMVPVAASQVKQIAGRAGRRGSIYPDGLTTTFLLDDLD 490

Query: 463 YLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHD 522
           YLI+CL+QPF++ KK+GLFP FEQ+E FA Q  ++TF +LL KF ENCR+D +YF+C  +
Sbjct: 491 YLIQCLQQPFEEAKKVGLFPCFEQVESFAIQFPDLTFNELLDKFRENCRVDSTYFMCHQE 550

Query: 523 HIKKVANMLEKVPGLSLEDRFNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPK 582
            IKKVANMLE++ GLSL+DR+NFCFAPVN+RDPKAMYHLLRFA++YS +  V+IAMGMPK
Sbjct: 551 SIKKVANMLERIQGLSLKDRYNFCFAPVNIRDPKAMYHLLRFATNYSQSRRVSIAMGMPK 610

Query: 583 GSARNDLELLDLETKHQVLSMYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANW 642
           GSA+ND ELLDLETKHQVLSMYLWLS HF+E+ FP+V+K E M+I+IADLL +SL KA+W
Sbjct: 611 GSAKNDTELLDLETKHQVLSMYLWLSHHFEEDHFPHVQKAEEMSINIADLLAKSLAKASW 670

Query: 643 KPESRQARKPKPQDKEGHE 660
           KP SRQ  KP+ +++E ++
Sbjct: 671 KPTSRQQAKPRRENEEDND 688

[Close]

BLAST of CcUC06G119900 vs. ExPASy Swiss-Prot
Match: Q8IYB8 (ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Homo sapiens OX=9606 GN=SUPV3L1 PE=1 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 1.8e-122
Identity = 243/554 (43.86%), Postives = 339/554 (61.19%), Query Frame = 0


Query: 85  QALGIYIGMS--FFPTAVHKFRSFFFKKCSTDVVKYLVF------LGPSDDAVKFLFPIF 144
           Q LG   G+    F  A   FR++  +  S DV  ++V          +DD    LFP F
Sbjct: 107 QKLGADYGLDARLFHQAFISFRNYIMQSHSLDVDIHIVLNDICFGAAHADD----LFPFF 166

Query: 145 VEYCLEEFP-----DEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYN 204
           + +  + FP     D++R+       +DL  P  W+P ARAM+RKII+H GPTNSGKTY+
Sbjct: 167 LRHAKQIFPVLDCKDDLRKI------SDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYH 226

Query: 205 ALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLV----PFSSHTACTV 264
           A+Q++  AK G+YC PL+LLA E+F+K NA GV C L+TG+E+  V      +SH +CTV
Sbjct: 227 AIQKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTV 286

Query: 265 EMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSET 324
           EM S    YEVAV+DEIQM+ DP RG+AWTRALLGL A+E+HLCG+P+ +++V ++   T
Sbjct: 287 EMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMYTT 346

Query: 325 GDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKLTKHRCCV 384
           G+E+  + Y+R  P+ V     L  L N+R GDCIV FS+ +I+ V   IE +      V
Sbjct: 347 GEEVEVRDYKRLTPISV-LDHALESLDNLRPGDCIVCFSKNDIYSVSRQIE-IRGLESAV 406

Query: 385 VYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYDGN----- 444
           +YG+LPP T+  QA  FND ++   ILVA+DA+GMGLNL+IRR++FY+L K   N     
Sbjct: 407 IYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGER 466

Query: 445 KVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFPYF 504
           ++ P+  SQ  QIAGRAGR  SR+ +G  TT++ EDL  L E LK+P D ++  GL P  
Sbjct: 467 ELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAAGLHPTA 526

Query: 505 EQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDRFN 564
           EQIE+FA  + + T   L+  F +  ++DG YF+C  D  K  A +++ +P LSL  R+ 
Sbjct: 527 EQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIP-LSLRVRYV 586

Query: 565 FCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIA-----MGMPKGSARNDLELLDLETKHQ 612
           FC AP+N + P     LL+FA  YS N P+  A     +  P    +N  +L+DLE  H 
Sbjct: 587 FCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHD 646

[Close]

BLAST of CcUC06G119900 vs. ExPASy Swiss-Prot
Match: Q5EBA1 (ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Supv3l1 PE=2 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 3.7e-120
Identity = 234/535 (43.74%), Postives = 330/535 (61.68%), Query Frame = 0


Query: 96  FPTAVHKFRSFFFKKCSTDVVKYLVF--LGPSDDAVKFLFPIFVEYCLEEFP-----DEI 155
           F  A   FR++  +  S DV  ++V   +  S   V  LFP F+ +  + FP     D++
Sbjct: 120 FHQAFISFRNYIMQSHSLDVDIHIVLNDICFSAAHVDDLFPFFLRHAKQIFPVLECKDDL 179

Query: 156 RRFQSMVDSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPL 215
           R+       +DL +P  W+P ARA++RKII+H GPTNSGKTY+A+QR++ A  G+YC PL
Sbjct: 180 RQI------SDLRRPPNWYPEARAIQRKIIFHSGPTNSGKTYHAIQRYLSATSGVYCGPL 239

Query: 216 RLLAMEVFDKVNAHGVYCSLLTGQEKKLV----PFSSHTACTVEMVSTEELYEVAVVDEI 275
           +LLA E+F+K NA GV C L+TG+E+  V      ++H +CTVEM +    YEVAV+DEI
Sbjct: 240 KLLAHEIFEKSNAAGVPCDLVTGEERLTVEPEGKQATHVSCTVEMCNVATPYEVAVIDEI 299

Query: 276 QMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQHYERFKPLVV 335
           QM+ DP RG+AWTRALLGL A+E+HLCG+ + +++V ++   TG+E+  Q YER  P+ V
Sbjct: 300 QMIRDPARGWAWTRALLGLCAEEVHLCGESAAIDLVTELLYTTGEEVEVQKYERLTPISV 359

Query: 336 EAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKLTKHRCCVVYGALPPETRRHQANLF 395
             +  L  L N+R GDCIV FS+ +I+ V   IE +      V+YG+LPP T+  QA  F
Sbjct: 360 LDRA-LESLDNLRPGDCIVCFSKNDIYSVSRQIE-IRGLESAVIYGSLPPGTKLAQARKF 419

Query: 396 NDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYDGN-----KVVPVPASQVKQIAGRA 455
           ND ++   ILVA+DA+GMGLNL+IRR++FY+L K   N     ++ P+  SQ  QIAGRA
Sbjct: 420 NDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINEKGEKELEPITTSQALQIAGRA 479

Query: 456 GRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVTFCQ 515
           GR  S + +G  TT+H +DL  L E L +P D ++  GL P  EQIE+FA  +   T   
Sbjct: 480 GRFSSHFKEGEVTTMHRDDLALLKEILNRPVDPIQAAGLHPTAEQIEMFAYHLPETTLSN 539

Query: 516 LLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDRFNFCFAPVNVRDPKAMYHL 575
           L+  F +  ++DG YF+C  D  K  A +++ +P LSL  R+ FC AP+N + P     L
Sbjct: 540 LIDIFVDFAQVDGQYFVCNMDDFKFSAELIQHIP-LSLRVRYVFCTAPINKKQPFVCSSL 599

Query: 576 LRFASSYSCNVPVNIA-----MGMPKGSARNDLELLDLETKHQVLSMYLWLSQHF 610
           L+FA  YS N P+  A     +  P    +N  +L+DLE  H V  +YLWLS  F
Sbjct: 600 LQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKDLMDLEAVHDVFDLYLWLSYRF 645

[Close]

BLAST of CcUC06G119900 vs. ExPASy TrEMBL
Match: A0A6J1HJ14 (RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111464502 PE=4 SV=1)

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 603/671 (89.87%), Postives = 632/671 (94.19%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           M+T GD+C   SICG+IVDD+ NG +DLRS KLR+YE  R  DPVELYREL  V +G A 
Sbjct: 127 MITGGDDCSEGSICGTIVDDSKNGGDDLRSSKLRNYETIRLSDPVELYRELRGVGRGSAK 186

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
            + S+WLTLQEIF YF KSGWA NQALGIYIG+SFFPTAVHKF+SFFFKKCSTDVVKYLV
Sbjct: 187 PEQSEWLTLQEIFRYFAKSGWASNQALGIYIGLSFFPTAVHKFQSFFFKKCSTDVVKYLV 246

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPS+DAVKFLFPIFVEYCLEEFPDEIRRF+SMVDSADLTKPHTWFPFARAMKRKIIYH
Sbjct: 247 FLGPSNDAVKFLFPIFVEYCLEEFPDEIRRFRSMVDSADLTKPHTWFPFARAMKRKIIYH 306

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS
Sbjct: 307 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 366

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVST+E+YEVAVVDEIQMMSD  RGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 367 SHIACTVEMVSTDEMYEVAVVDEIQMMSDSYRGYAWTRALLGLKADEIHLCGDPSVLNVV 426

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHEQHY RFKPLVVEAKTLLGDL+NVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 427 RKICSETGDELHEQHYGRFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREIFEVKLAIEKL 486

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YGALPPETRRHQANLFNDQ +EFD+LVASDA+GMGLNLNIRRVVFYNLAKY+
Sbjct: 487 TKHRCCVIYGALPPETRRHQANLFNDQHSEFDVLVASDALGMGLNLNIRRVVFYNLAKYN 546

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+KVVPVPASQVKQIAGRAGRRGSRYPDGL TTL+L+DLDYLIECLKQPFDDV+KIGLFP
Sbjct: 547 GDKVVPVPASQVKQIAGRAGRRGSRYPDGLTTTLNLDDLDYLIECLKQPFDDVQKIGLFP 606

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
            FEQ+ELFAGQVSNVTFCQLL KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSL DR
Sbjct: 607 CFEQVELFAGQVSNVTFCQLLEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLADR 666

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFASSYS NVPVNIAMGMPKGSARND+ELLDLETKHQVLS
Sbjct: 667 FNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVNIAMGMPKGSARNDMELLDLETKHQVLS 726

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKK EVMA DIADLLGQSLTKANWKPESRQA KPK Q KEGHEK
Sbjct: 727 MYLWLSQHFKEETFPYVKKAEVMATDIADLLGQSLTKANWKPESRQAGKPKSQSKEGHEK 786

Query: 661 PRSPVGVYEKQ 672
           PRSPV +YEKQ
Sbjct: 787 PRSPVSLYEKQ 797

[Close]

BLAST of CcUC06G119900 vs. ExPASy TrEMBL
Match: A0A6J1KBZ5 (RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111494214 PE=4 SV=1)

HSP 1 Score: 1243.0 bits (3215), Expect = 0.0e+00
Identity = 602/671 (89.72%), Postives = 631/671 (94.04%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           M+T GD+C   SICG+IVDD+ NG +DLRS KLR+YE  R  DPVELYREL  V +G A 
Sbjct: 127 MITGGDDCSEGSICGTIVDDSKNGGDDLRSSKLRNYETIRLSDPVELYRELRSVGRGSAK 186

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
            + S+WLTLQEIF YF KSGWA NQALGIYIG+SFF TAVHKF+SFFFKKCSTDV+KYLV
Sbjct: 187 PEQSEWLTLQEIFRYFAKSGWASNQALGIYIGLSFFQTAVHKFQSFFFKKCSTDVMKYLV 246

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPS+DAVKFLFPIFVEYCLEEFPDEIRRF+SMVDSADLTKPHTWFPFARAMKRKIIYH
Sbjct: 247 FLGPSNDAVKFLFPIFVEYCLEEFPDEIRRFRSMVDSADLTKPHTWFPFARAMKRKIIYH 306

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKK VPFS
Sbjct: 307 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKRVPFS 366

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVST+E+YEVAVVDEIQMMSD  RGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 367 SHIACTVEMVSTDEMYEVAVVDEIQMMSDSYRGYAWTRALLGLKADEIHLCGDPSVLNVV 426

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHEQHYERFKPLVVEAKTLLGDL+NVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 427 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREIFEVKLAIEKL 486

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YGALPPETRRHQANLFNDQ +EFD+LVASDA+GMGLNLNIRRVVFYNLAKY+
Sbjct: 487 TKHRCCVIYGALPPETRRHQANLFNDQHSEFDVLVASDALGMGLNLNIRRVVFYNLAKYN 546

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+KVVPVPASQVKQIAGRAGRRGSRYPDGL TTL+L+DLDYLIECLKQPFDDV+KIGLFP
Sbjct: 547 GDKVVPVPASQVKQIAGRAGRRGSRYPDGLTTTLNLDDLDYLIECLKQPFDDVQKIGLFP 606

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
            FEQ+ELFAGQVSNVTFCQLL KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSLEDR
Sbjct: 607 CFEQVELFAGQVSNVTFCQLLEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDR 666

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFASSYS NVPVNIAMGMPKGSARND ELLDLETKHQVLS
Sbjct: 667 FNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVNIAMGMPKGSARNDTELLDLETKHQVLS 726

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKK EVMA DIADLLGQSLTKANWKPESRQA KPK Q KEGHEK
Sbjct: 727 MYLWLSQHFKEETFPYVKKAEVMATDIADLLGQSLTKANWKPESRQAGKPKSQSKEGHEK 786

Query: 661 PRSPVGVYEKQ 672
           PRSPV +YEKQ
Sbjct: 787 PRSPVSLYEKQ 797

[Close]

BLAST of CcUC06G119900 vs. ExPASy TrEMBL
Match: A0A6J1DV62 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024354 PE=4 SV=1)

HSP 1 Score: 1241.5 bits (3211), Expect = 0.0e+00
Identity = 603/671 (89.87%), Postives = 630/671 (93.89%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           MVT GD     SICGS+VDD+ N D+DL+  KLRS E+ RSCDPV LYREL  VE GGA 
Sbjct: 126 MVTGGDGFNEGSICGSLVDDSKNSDDDLKLTKLRSDESVRSCDPVALYRELRSVEMGGAK 185

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
           ++ S+WLTLQE+F YFV SGWA NQALGIYIGMSFFPTAVHKFRSFFFKKC T V KYLV
Sbjct: 186 LEQSEWLTLQEVFRYFVNSGWACNQALGIYIGMSFFPTAVHKFRSFFFKKCCTGVGKYLV 245

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPSDDAVKFLFPIFVEYCLEEFPDEI+RF+SMVDSADLTKPHTWFPFARAMKRKIIYH
Sbjct: 246 FLGPSDDAVKFLFPIFVEYCLEEFPDEIKRFRSMVDSADLTKPHTWFPFARAMKRKIIYH 305

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS
Sbjct: 306 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 365

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVST+ELY+VAVVDEIQMMSDP RGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 366 SHVACTVEMVSTDELYDVAVVDEIQMMSDPYRGYAWTRALLGLKADEIHLCGDPSVLNVV 425

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDEL E HYERFKPLVVEAKTLLGDL+NVRSGDCIVAFSRREIFEVKL IEKL
Sbjct: 426 RKICSETGDELLEHHYERFKPLVVEAKTLLGDLRNVRSGDCIVAFSRREIFEVKLAIEKL 485

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           T HRCCV+YGALPPETRRHQANLFNDQDNEFD+LVASDAVGMGLNLNIRRVVFYNLAKY+
Sbjct: 486 TTHRCCVIYGALPPETRRHQANLFNDQDNEFDVLVASDAVGMGLNLNIRRVVFYNLAKYN 545

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+KVVPVPASQ+KQIAGRAGRRGSRYPDGL TTL+L+DLDYLIECLKQPFDDVKKIGLFP
Sbjct: 546 GDKVVPVPASQIKQIAGRAGRRGSRYPDGLTTTLNLDDLDYLIECLKQPFDDVKKIGLFP 605

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
           YFEQ+ELFAG+VSN+TFCQLL KFSENCRLDGSYFLC+HDHIKKVANMLEKV GLSLEDR
Sbjct: 606 YFEQVELFAGKVSNLTFCQLLEKFSENCRLDGSYFLCRHDHIKKVANMLEKVQGLSLEDR 665

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           FNFCFAPVNVRDPKAMYHLLRFASSYS NVPVNIAMGMPKGSARND ELLDLETKHQVLS
Sbjct: 666 FNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVNIAMGMPKGSARNDSELLDLETKHQVLS 725

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKK EVMA DIADLLGQSLTKANWKPESRQA KPKPQ KEG+E 
Sbjct: 726 MYLWLSQHFKEETFPYVKKAEVMATDIADLLGQSLTKANWKPESRQAGKPKPQHKEGNEN 785

Query: 661 PRSPVGVYEKQ 672
           PRSPV +YEKQ
Sbjct: 786 PRSPVRLYEKQ 796

[Close]

BLAST of CcUC06G119900 vs. ExPASy TrEMBL
Match: A0A0A0KBA1 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_6G004580 PE=4 SV=1)

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 592/671 (88.23%), Postives = 627/671 (93.44%), Query Frame = 0


Query: 1   MVTVGDECIGDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGAN 60
           MVT  D CIGDSICGSIVDD+ NGD+DLRS KLR+YE  +SCDPVELY EL  VE GG+ 
Sbjct: 123 MVTGEDGCIGDSICGSIVDDSKNGDSDLRSSKLRNYETIKSCDPVELYSELRSVEMGGSK 182

Query: 61  VDHSDWLTLQEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLV 120
           V+ S+WL LQEIF YF+ SGWA NQALGIYIGMSFFPTAV KFR+FF KKCSTDVVKYLV
Sbjct: 183 VELSNWLILQEIFHYFLHSGWASNQALGIYIGMSFFPTAVSKFRNFFLKKCSTDVVKYLV 242

Query: 121 FLGPSDDAVKFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYH 180
           FLGPSDDAVKFLFPIFVEYCL EFPDEI+RFQSMV SADLTKPHTWFPFARAMKRKIIYH
Sbjct: 243 FLGPSDDAVKFLFPIFVEYCLVEFPDEIKRFQSMVKSADLTKPHTWFPFARAMKRKIIYH 302

Query: 181 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFS 240
           CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKL+PFS
Sbjct: 303 CGPTNSGKTYNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLLPFS 362

Query: 241 SHTACTVEMVSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 300
           SH ACTVEMVSTE+LYE+AV+DEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV
Sbjct: 363 SHIACTVEMVSTEDLYEIAVIDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVV 422

Query: 301 RKICSETGDELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKL 360
           RKICSETGDELHEQHYERFKPLVVEAKTLLGD KNVRSGDCIVAFSRREIFEVKL IEK 
Sbjct: 423 RKICSETGDELHEQHYERFKPLVVEAKTLLGDFKNVRSGDCIVAFSRREIFEVKLAIEKF 482

Query: 361 TKHRCCVVYGALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYD 420
           TKHRCCV+YG+LPPETRRHQA+LFNDQDNEFD+LVASDAVGMGLNLNI RVVFYNLAK++
Sbjct: 483 TKHRCCVIYGSLPPETRRHQASLFNDQDNEFDVLVASDAVGMGLNLNIGRVVFYNLAKFN 542

Query: 421 GNKVVPVPASQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFP 480
           G+K+VPVPASQVKQIAGRAGRRGSRYPDGL TT  L+DLDYLIECLKQPFD+VKKIGLFP
Sbjct: 543 GDKIVPVPASQVKQIAGRAGRRGSRYPDGLTTTFCLDDLDYLIECLKQPFDEVKKIGLFP 602

Query: 481 YFEQIELFAGQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDR 540
            FEQ+ELFAGQ+S V F +LL KFSENCRLDGSYFLC+HD+IKKVANMLEKV GLSLEDR
Sbjct: 603 SFEQVELFAGQISKVAFAELLQKFSENCRLDGSYFLCRHDNIKKVANMLEKVSGLSLEDR 662

Query: 541 FNFCFAPVNVRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLS 600
           +NFCFAPVNVRDPKAMYHLLRFASSYS NVPV+IAMGMPKGSAR+D ELLDLE+KHQVLS
Sbjct: 663 YNFCFAPVNVRDPKAMYHLLRFASSYSHNVPVSIAMGMPKGSARSDSELLDLESKHQVLS 722

Query: 601 MYLWLSQHFKEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEK 660
           MYLWLSQHFKEETFPYVKKVEVMA DIA LLGQSLTKANWKPESRQA KPKP+DKEGHE 
Sbjct: 723 MYLWLSQHFKEETFPYVKKVEVMATDIAKLLGQSLTKANWKPESRQAGKPKPRDKEGHEN 782

Query: 661 PRSPVGVYEKQ 672
            +SPV V EKQ
Sbjct: 783 NKSPVWVQEKQ 793

[Close]

BLAST of CcUC06G119900 vs. ExPASy TrEMBL
Match: A0A1S3C8L1 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103497709 PE=4 SV=1)

HSP 1 Score: 1203.7 bits (3113), Expect = 0.0e+00
Identity = 583/662 (88.07%), Postives = 617/662 (93.20%), Query Frame = 0


Query: 10  GDSICGSIVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGANVDHSDWLTL 69
           G+S+  S V + VNGDNDLRS K RSYEN +SCDPVELY EL  VE GG+ V+ SD LTL
Sbjct: 92  GNSVSSSNVVE-VNGDNDLRSSKPRSYENIKSCDPVELYSELRSVEMGGSKVEPSDQLTL 151

Query: 70  QEIFGYFVKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLVFLGPSDDAV 129
           QEIF YF+ SGWA NQALGIYIGMSFFPTAV KFRSFFFKKCSTD+VKYLVFLGPSDDAV
Sbjct: 152 QEIFRYFLHSGWASNQALGIYIGMSFFPTAVSKFRSFFFKKCSTDIVKYLVFLGPSDDAV 211

Query: 130 KFLFPIFVEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKT 189
           KFLFPIFVEYCLEEFPDEI+RFQSMV SADLTKPHTWFPFARAMKRKIIYHCGPTNSGKT
Sbjct: 212 KFLFPIFVEYCLEEFPDEIKRFQSMVKSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKT 271

Query: 190 YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFSSHTACTVEM 249
           YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKL+PFSSH ACTVEM
Sbjct: 272 YNALQRFMEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLLPFSSHIACTVEM 331

Query: 250 VSTEELYEVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGD 309
           VST+EL+E+AV+DEIQMMSD CRG+AWTRALLGL+ADEIHLCGDPSVLNVVRKICSETGD
Sbjct: 332 VSTDELFEIAVIDEIQMMSDSCRGFAWTRALLGLRADEIHLCGDPSVLNVVRKICSETGD 391

Query: 310 ELHEQHYERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKLTKHRCCVVY 369
           ELHEQHYERFKPLVVEAKTLLGD KNVRSGDCIVAFSRREIFEVKL IEK T HRCCV+Y
Sbjct: 392 ELHEQHYERFKPLVVEAKTLLGDFKNVRSGDCIVAFSRREIFEVKLAIEKFTNHRCCVIY 451

Query: 370 GALPPETRRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPA 429
           G+LPPETRRHQA LFNDQDNEFD+LVASDAVGMGLNLNI RVVFY L+K++G+K+VPVPA
Sbjct: 452 GSLPPETRRHQATLFNDQDNEFDVLVASDAVGMGLNLNIGRVVFYTLSKFNGDKIVPVPA 511

Query: 430 SQVKQIAGRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFPYFEQIELFA 489
           SQVKQIAGRAGRRGSRYPDGL TT  L+DLDYLIECLKQPFDDVKKIGLFP FEQ+ELFA
Sbjct: 512 SQVKQIAGRAGRRGSRYPDGLTTTFSLDDLDYLIECLKQPFDDVKKIGLFPSFEQVELFA 571

Query: 490 GQVSNVTFCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDRFNFCFAPVN 549
           GQ+S V F  LL KFSENCRLDGSYFLC+HD+IKKVANMLEKVPGLSLEDR+NFCFAPVN
Sbjct: 572 GQISKVAFADLLQKFSENCRLDGSYFLCRHDNIKKVANMLEKVPGLSLEDRYNFCFAPVN 631

Query: 550 VRDPKAMYHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLSMYLWLSQHF 609
           VRDPKAMYHLLRFASSYS NVPV+IAMGMPKGSARND ELLDLETKHQVLSMYLWLSQHF
Sbjct: 632 VRDPKAMYHLLRFASSYSHNVPVSIAMGMPKGSARNDSELLDLETKHQVLSMYLWLSQHF 691

Query: 610 KEETFPYVKKVEVMAIDIADLLGQSLTKANWKPESRQARKPKPQDKEGHEKPRSPVGVYE 669
           KEETFPYVKKVEVMA DIA+LLGQSLTKANWKPESRQA KPKP+DKEGHEK +SPV V E
Sbjct: 692 KEETFPYVKKVEVMATDIAELLGQSLTKANWKPESRQAGKPKPRDKEGHEKTKSPVRVQE 751

Query: 670 KQ 672
           KQ
Sbjct: 752 KQ 752

[Close]

BLAST of CcUC06G119900 vs. TAIR 10
Match: AT5G39840.1 (ATP-dependent RNA helicase, mitochondrial, putative )

HSP 1 Score: 1000.0 bits (2584), Expect = 9.3e-292
Identity = 476/656 (72.56%), Postives = 573/656 (87.35%), Query Frame = 0


Query: 17  IVDDTVNGDNDLRSLKLRSYENFRSCDPVELYRELCIVEKGGANVDHSDWLTLQEIFGYF 76
           +++D+V  + D    +     N R  DPVELYREL   E   + + HS+W +L EIFG+F
Sbjct: 117 LLNDSVVAETDEIGSEAARALNDRYHDPVELYRELRGSEV-RSKLQHSEWDSLHEIFGFF 176

Query: 77  VKSGWARNQALGIYIGMSFFPTAVHKFRSFFFKKCSTDVVKYLVFLGPSDDAVKFLFPIF 136
            +SGWA NQAL IYIG SFFPTAV KFR FF +KC  +VV+ LV +GP+D AVKFLFP+F
Sbjct: 177 AQSGWAANQALAIYIGKSFFPTAVSKFRDFFIEKCGIEVVQDLVRVGPTDVAVKFLFPVF 236

Query: 137 VEYCLEEFPDEIRRFQSMVDSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRF 196
           VE+C+EEFPDEI+RF+S+VD+ADLTKP TWFPFARAMKRKI+YHCGPTNSGKTYNALQRF
Sbjct: 237 VEFCIEEFPDEIKRFKSIVDTADLTKPATWFPFARAMKRKIVYHCGPTNSGKTYNALQRF 296

Query: 197 MEAKKGIYCSPLRLLAMEVFDKVNAHGVYCSLLTGQEKKLVPFSSHTACTVEMVSTEELY 256
           MEAK G+YCSPLRLLAMEVFDKVNA G+YCSLLTGQEKK VPF++H +CTVEMVST+ELY
Sbjct: 297 MEAKNGLYCSPLRLLAMEVFDKVNALGIYCSLLTGQEKKYVPFANHVSCTVEMVSTDELY 356

Query: 257 EVAVVDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQHY 316
           EVAV+DEIQMM+DP RG+AWT+ALLGLKADEIHLCGDPSVL++VRK+C++TGDEL E+HY
Sbjct: 357 EVAVLDEIQMMADPSRGHAWTKALLGLKADEIHLCGDPSVLDIVRKMCADTGDELVEEHY 416

Query: 317 ERFKPLVVEAKTLLGDLKNVRSGDCIVAFSRREIFEVKLVIEKLTKHRCCVVYGALPPET 376
           ERFKPLVVEAKTLLG+LKNV+SGDC+VAFSRREIFEVK+ IEK T HRCCV+YGALPPET
Sbjct: 417 ERFKPLVVEAKTLLGELKNVKSGDCVVAFSRREIFEVKMAIEKHTNHRCCVIYGALPPET 476

Query: 377 RRHQANLFNDQDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIA 436
           RR QA LFNDQ+NE+D+LVASDAVGMGLNLNIRRVVFY+L KY+G+K+VPV ASQVKQIA
Sbjct: 477 RRQQAKLFNDQENEYDVLVASDAVGMGLNLNIRRVVFYSLNKYNGDKIVPVAASQVKQIA 536

Query: 437 GRAGRRGSRYPDGLATTLHLEDLDYLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVT 496
           GRAGRRGSRYPDGL TTLHLEDL+YLIECL+QPFD+V K+GLFP+FEQIELFA QV ++ 
Sbjct: 537 GRAGRRGSRYPDGLTTTLHLEDLNYLIECLQQPFDEVTKVGLFPFFEQIELFAAQVPDMA 596

Query: 497 FCQLLTKFSENCRLDGSYFLCQHDHIKKVANMLEKVPGLSLEDRFNFCFAPVNVRDPKAM 556
           F  LL  F ++CRLDGSYFLC+HDH+KKVANMLEKV GLSLEDRFNFCFAPVN+R+P+AM
Sbjct: 597 FSNLLEHFGKHCRLDGSYFLCRHDHVKKVANMLEKVEGLSLEDRFNFCFAPVNIRNPRAM 656

Query: 557 YHLLRFASSYSCNVPVNIAMGMPKGSARNDLELLDLETKHQVLSMYLWLSQHFKEETFPY 616
           ++L RFASSYS N+PVN+AMG+PK SA++D +LLDLE++HQ+LSMYLWLS  F EE FP+
Sbjct: 657 HNLYRFASSYSQNMPVNVAMGIPKSSAKSDAQLLDLESRHQILSMYLWLSNQF-EENFPF 716

Query: 617 VKKVEVMAIDIADLLGQSLTKANWKPESRQAR-KPKPQDKEGHEKPRSPVGVYEKQ 672
           V+KVE MA +IA+LLG+SL+KA+WK ES++ + K + ++  G+E+P S + + +K+
Sbjct: 717 VEKVEAMATNIAELLGESLSKASWKMESKEEKVKGQMKEDRGYERPASLIKLVKKR 770

[Close]

BLAST of CcUC06G119900 vs. TAIR 10
Match: AT4G14790.1 (ATP-dependent RNA helicase, mitochondrial (SUV3) )

HSP 1 Score: 426.8 bits (1096), Expect = 3.3e-119
Identity = 218/490 (44.49%), Postives = 312/490 (63.67%), Query Frame = 0


Query: 153 SMVDSADLTKPHTWFPFARAMKRKIIYHCGPTNSGKTYNALQRFMEAKKGIYCSPLRLLA 212
           S  D  DLT PHTW+P AR  KRK+I H GPTNSGKTY+AL+   ++  G+YC PLRLLA
Sbjct: 67  SKFDFTDLTCPHTWYPIARKKKRKVILHVGPTNSGKTYSALKHLEQSSSGVYCGPLRLLA 126

Query: 213 MEVFDKVNAHGVYCSLLTGQEKKLVPFSSHTACTVEMVSTEELYEVAVVDEIQMMSDPCR 272
            EV  ++N   V C L+TGQEK LV  ++H A TVEM     +Y+ A++DEIQM+    R
Sbjct: 127 WEVAKRLNKANVPCDLITGQEKDLVEGATHKAVTVEMADVTSVYDCAIIDEIQMVGCKQR 186

Query: 273 GYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQHYERFKPLVVEAKTLLGD 332
           G+A+TRALLG+ ADE+HLCGDP+V+ +V  I   TGD++    YER  PL V  K  +  
Sbjct: 187 GFAFTRALLGIAADELHLCGDPAVVPLVEDILKVTGDDVEVHTYERLSPL-VPLKVPVSS 246

Query: 333 LKNVRSGDCIVAFSRREIFEVKLVIEKLTKHRCCVVYGALPPETRRHQANLFNDQDNEFD 392
           + ++++GDC+V FSR++I+  K  IE+  KH C VVYG+LPPETR  QA  FND+ N+FD
Sbjct: 247 VSSIKTGDCLVTFSRKDIYAYKKTIERAGKHLCSVVYGSLPPETRTAQATRFNDETNDFD 306

Query: 393 ILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIAGRAGRRGSRYPDGLAT 452
           +LVASDA+GMGLNLNI R++F  L KYDG++   +  S++KQIAGRAGR  S++P G  T
Sbjct: 307 VLVASDAIGMGLNLNISRIIFSTLQKYDGSETRDLTVSEIKQIAGRAGRFQSKFPIGEVT 366

Query: 453 TLHLEDLDYLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVTFCQLLTKFSENCRLDG 512
            LH EDL  L   LK P   +++ GLFP F+ +  ++         Q+L  F EN +L  
Sbjct: 367 CLHKEDLPLLHSSLKSPSPILERAGLFPTFDLLSGYSQAHPTHGLYQILEHFVENAKLSS 426

Query: 513 SYFLCQHDHIKKVANMLEKVPGLSLEDRFNFCFAPVNVRDPKAMYHLLRFASSYSCNVPV 572
           +YF+   + + KVA +++++P L L++++ F  +PV+V D  +   L +FA ++S    V
Sbjct: 427 NYFISNVEDMMKVAAIVDELP-LGLQEKYLFVVSPVDVNDEISGQGLAQFAQNFSKAGIV 486

Query: 573 NIAMGMPKGSA---RNDLELLDLETKHQVLSMYLWLSQHFKEETFPYVKKVEVMAIDIAD 632
            +   +        +   EL +LE+ H+VL +Y+WLS    E++FP  ++V      I +
Sbjct: 487 RLREILAPDRVKVPKTPTELKELESIHKVLDLYVWLSLRL-EDSFP-DREVAASQKSICN 546

Query: 633 LLGQSLTKAN 640
           LL +   + N
Sbjct: 547 LLIEQFLEGN 552

[Close]

BLAST of CcUC06G119900 vs. TAIR 10
Match: AT1G59760.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.1e-05
Identity = 22/57 (38.60%), Postives = 36/57 (63.16%), Query Frame = 0


Query: 387 QDNEFDILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIAGRAGRRG 444
           Q+     L A++   +GLN+  + VVF N+ K+DG+K   + + +  Q++GRAGRRG
Sbjct: 406 QEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSGEYIQMSGRAGRRG 462

[Close]

BLAST of CcUC06G119900 vs. TAIR 10
Match: AT1G70070.1 (DEAD/DEAH box helicase, putative )

HSP 1 Score: 46.6 bits (109), Expect = 9.1e-05
Identity = 33/113 (29.20%), Postives = 54/113 (47.79%), Query Frame = 0


Query: 393 ILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIAGRAGRRGSRYPDGLAT 452
           ++ A++ +  G+N+  R  V  +L+K  GN+ + +  +++ Q+AGRAGRRG    +   T
Sbjct: 524 VVFATETLAAGINMPARTAVISSLSKKAGNERIELGPNELYQMAGRAGRRG--IDEKGYT 583

Query: 453 TLHLEDLDYLIECLKQPFDDVKKIGLFPYFEQIELFAGQVSNVTFCQLLTKFS 506
            L     +   EC K  F  VK     P   Q     G V N+     +T+ S
Sbjct: 584 VLVQTAFEGAEECCKLVFAGVK-----PLVSQFTASYGMVLNLVAGSKVTRKS 629

[Close]

BLAST of CcUC06G119900 vs. TAIR 10
Match: AT3G46960.1 (RNA helicase, ATP-dependent, SK12/DOB1 protein )

HSP 1 Score: 43.5 bits (101), Expect = 7.7e-04
Identity = 21/51 (41.18%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 393 ILVASDAVGMGLNLNIRRVVFYNLAKYDGNKVVPVPASQVKQIAGRAGRRG 444
           +L +++   MG+N   R VVF  L K+DG +   +   +  Q+AGRAGRRG
Sbjct: 741 VLFSTETFAMGVNAPARTVVFDALRKFDGKEFRQLLPGEYTQMAGRAGRRG 791

The following BLAST results are available for this feature:

BLAST of CcUC06G119900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038907113.1	0.0e+00	91.36	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Benincasa hispida]	[more]
XP_023514781.1	0.0e+00	90.16	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita pepo subsp....	[more]
XP_022964491.1	0.0e+00	89.87	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita moschata] >...	[more]
XP_022999869.1	0.0e+00	89.72	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita maxima] >XP...	[more]
KAG7025996.1	0.0e+00	89.72	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial [Cucurbita argyrosperm...	[more]

BLAST of CcUC06G119900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KFV7	1.3e-290	72.56	DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thalian...	[more]
Q01IJ3	2.9e-253	67.69	ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. indica OX...	[more]
Q7X745	2.9e-253	67.69	ATP-dependent RNA helicase SUV3L, mitochondrial OS=Oryza sativa subsp. japonica ...	[more]
Q8IYB8	1.8e-122	43.86	ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Homo sapiens OX=9606 GN=SUP...	[more]
Q5EBA1	3.7e-120	43.74	ATP-dependent RNA helicase SUPV3L1, mitochondrial OS=Rattus norvegicus OX=10116 ...	[more]

BLAST of CcUC06G119900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ14	0.0e+00	89.87	RNA helicase OS=Cucurbita moschata OX=3662 GN=LOC111464502 PE=4 SV=1	[more]
A0A6J1KBZ5	0.0e+00	89.72	RNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111494214 PE=4 SV=1	[more]
A0A6J1DV62	0.0e+00	89.87	RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024354 PE=4 SV=1	[more]
A0A0A0KBA1	0.0e+00	88.23	RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_6G004580 PE=4 SV=1	[more]
A0A1S3C8L1	0.0e+00	88.07	RNA helicase OS=Cucumis melo OX=3656 GN=LOC103497709 PE=4 SV=1	[more]

BLAST of CcUC06G119900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39840.1	9.3e-292	72.56	ATP-dependent RNA helicase, mitochondrial, putative	[more]
AT4G14790.1	3.3e-119	44.49	ATP-dependent RNA helicase, mitochondrial (SUV3)	[more]
AT1G59760.1	9.1e-05	38.60	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]
AT1G70070.1	9.1e-05	29.20	DEAD/DEAH box helicase, putative	[more]
AT3G46960.1	7.7e-04	41.18	RNA helicase, ATP-dependent, SK12/DOB1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 144..325 e-value: 0.0076 score: 16.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 169..285 score: 9.698009
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 349..443 e-value: 1.5E-17 score: 74.3
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 333..443 e-value: 1.2E-13 score: 51.3
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 328..481 score: 12.450895
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 163..317 e-value: 1.3E-164 score: 549.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 318..470 e-value: 1.3E-164 score: 549.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 327..572
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 170..283
None	No IPR available	GENE3D	1.20.58.1080		coord: 546..651 e-value: 3.6E-18 score: 67.3
None	No IPR available	GENE3D	1.20.272.40		coord: 158..544 e-value: 1.3E-164 score: 549.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 639..671
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 642..671
None	No IPR available	PANTHER	PTHR12131:SF1	ATP-DEPENDENT RNA HELICASE SUPV3L1, MITOCHONDRIAL	coord: 39..656
None	No IPR available	PANTHER	PTHR12131	ATP-DEPENDENT RNA AND DNA HELICASE	coord: 39..656
None	No IPR available	CDD	cd18805	SF2_C_suv3	coord: 320..455 e-value: 6.55849E-80 score: 247.857
IPR022192	Mitochondrial degradasome RNA helicase subunit, C-terminal domain	PFAM	PF12513	SUV3_C	coord: 589..636 e-value: 4.7E-11 score: 42.4
IPR041082	Suv3, C-terminal domain 1	PFAM	PF18147	Suv3_C_1	coord: 525..567 e-value: 3.8E-18 score: 65.1
IPR044774	Suv3, DEXQ-box helicase domain	CDD	cd17913	DEXQc_Suv3	coord: 175..316 e-value: 1.55733E-97 score: 294.08

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G119900.1	CcUC06G119900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000965	mitochondrial RNA 3'-end processing
biological_process	GO:0006401	RNA catabolic process
cellular_component	GO:0045025	mitochondrial degradosome
cellular_component	GO:0042645	mitochondrial nucleoid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0016817	hydrolase activity, acting on acid anhydrides