CcUC06G119040 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G119040
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCytochrome c oxidase subunit 2
LocationCicolChr06: 14440789 .. 14443935 (-)
RNA-Seq ExpressionCcUC06G119040
SyntenyCcUC06G119040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGTTCTAAAATGGCTATTCCTCACAATTGCTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATCTCAAGACGCAGCAACACCTATGATGCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTCATTCTGATTTTTGTTTTCGTATCACGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATCAAAAAAATCAAATACCGCAAAGGATTGTTCATGGAACTACTATCGAGATTCTTTGGACCATTTTTCCTAGTATCATTCCGATGTTCATTGCTATACCATCCTTTGCTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGGACTTATGAGTATTCTGACTATAACAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATAGAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTTGGGCTGTACCTTCCTCAGGTGTCAAATGTGATGCTGTACCTGGTCGTTTAAATCAGATCTCCATTTTGGTACAACGAGAAGGAGTTTACTATGGTCAGTGCAGTGAGATTTGTGGAACTAATCATGCCTTTACGCGTGCGCCCAGAAACATAGGCCGACTGCTGAGCCCACTCTGGCTCAGCCGCACCACCCGGGGTGCGAGCCACCCGAGATACAGCATTTTCTTTGACTCATGCCTTGGAGAAGAACGTTCTTTGTTTGAGTTTTCTTTGTTTTTGTTCCCTGAGCTTGAAACTGTATAAACTGCTGCCCTGGACAAATTCCTTATTGTGCAAATCGGAGAAAGGTACTCAGAAAAAGGTGTGATCGAGTCAATGTGCTTTCCTGGTGGATCACCATCTCTGATGCTTTCTTCTGTGTGTGGTAGGTATGATTTTTTGTGTATTAGCGTATAGAAGGCACTTCTCCGTCTTTTTTGTGGAATGGAGAAAAGGGGAAAAATTAGCTTTTTATGATTATATCGGGAATAATCCCGCAAAAGGTGGATTATTCAGAGCGGGTTCCATGGACAACGGGGATGGAATAGCTGTTGGGTGGTTAGGACACCCTGTTTTTAGAGATAAAGAAGGGCGCGAACTTTTTGTACGCCGTATGCCGACCTTTTTTGAAACATTTCCCATTGTTTTGGTAGACGGCGCACAAAGTAACAAATAAAAAATTCACCTCATTATTATCAATCAAGTTATTGAATATTTTAAATAAATCCCGAAATTCAAAACTCCCCGTTGTCCAATAAAGACCTAAAATCCCTAATAATAAACCAAAATCTCCTACGCGATTAGTTACAAATGCCTTTTGACAAGGTTTGGCCTATTCAAATTCAAAGGGTGAAGGTGCACTATTTAATAATCAAGGCTGTTACCATGTTAAATAAAGGTTGAGATGCTTTCTATTGATAAAAGCGCTCCTCGCGACTTCAGAAGCCGAACCCAAAGGCGATGCTTTTGTCGAGGCTGGAACTTTTGGCGATGAGACTTTCGAAGCACTTATTCTTTCTGATAAGCGAAGCTGTTGGTGATGCCTCTTTCTTATTATTAGTAAGATAGGGTTCCAGTACACAAACAAGGTGGGTTGGGGTTTCTTTCTCAATCTTTCTCTGATTCTAGCCGTGTAGTGGATCCGGCTTTAGTCGGTTAAAAAGAGGTGTGTGTGGCNGGGATAACACAAACATCGGAAATAGCATAGTATTATCTGATTCATAGGGATACGAAAAAGTATTTTTAGTACCAAAATGGGGAATAGTAACAAAAGGGCGCATAATTTTTGTTACATTACTATCAATTTGATATGTTGTTTTTTTCACCAAAAAAGAAGACCTTTCATTATTATTCATTGTTAATAATGATAAGAAACGAAAGTTTTTTTGAATGATTTTTGATCCTTCTTTACCCCATAATGATATTGAATAGAGGGAGTTATTTGTTTTTCCACTGTAGTTTTTACAATAAAGGTTTAAATGTCCATCAAAAGTAAGTAAGTAGATGCGAAACATATAAAATGCTGTTAATCCAGCTGTGGAACAGGCTATTATTGCGAAAATCGGTGAATACAACCAACTATCATTAAGAATTTCATCTTTGGACCAAAAGCAGGCAAGGGGTGGAATACCACAAAGAGAAAGGGTACCTAATAAAAAAGCATTTTTTGTAATTGGCACATGCTTTGTTAAACCACCCATAAGAACCATATTCTGACTTTTATCGGGAGAATATCCAACAACGGATTCCATTGAGTGAATAATGGACCCAGATCCTAAAAACAACAACGCTTTTGAATAAGCATGAGTAATCAAATGAAATAAAGCAGCCCGATAAGACCCCATACCCAAAGCTAACATCATATAACCCAATTGAGACATTGTAGAATAGGCTAAACTTCTCTTAATATCTTTTTGAGCAAGAGCTAAAGTAGCTCCAAATAGTACTGTTATTATACCTATCGAAGCTATTAGATTCATGATATAAGGTATTACTACAAAAAGCGGAAGAAGCCGAGCGACAAGAAAAATTCCCGCTGCTACCATCGTAGCAGCATGTATAAGAGCCGAAATGGGGGTAGGACCCTCCATAGCATCAGGTAACCATACATGAAGAGGAAATTGAGCAGATTTAGCAACCGCACCTGCAAATAATAGGACGGCGCACAAAGTAACAAATAAAAAATTCACCTCATTATTATCAATCAAGTTATTGAATATTTTAAATAAATCCCGAAATTCAAAACTCCCCGTTGTCCAATAAAGACCTAAAATCCCTAATAATAAACCAAAATCTCCTACGCGATTAGTTACAAATGCCTTTTGACAAGGTTTGGCCTATTCAAATTCAAAGGGTGAAGGTGCACTATTTAATAATCAAGGCTGTTACCATGTTAAATAAAGGTTGAGATGCTTTCTATTGATAAAAGCGCTCCTCGCGACTTCAGAAGCCGAACCCAAAGGCGATGCTTTTGTCGAGGCTGGAACTTTTGGCGATGAGACTTTCGAAGCACTTATTCTTTCTGATAAGCGAAGCTGTTGGTGA

mRNA sequence

ATGATTGTTCTAAAATGGCTATTCCTCACAATTGCTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATCTCAAGACGCAGCAACACCTATGATGCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTCATTCTGATTTTTGTTTTCGTATCACGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATCAAAAAAATCAAATACCGCAAAGGATTGTTCATGGAACTACTATCGAGATTCTTTGGACCATTTTTCCTAGTATCATTCCGATGTTCATTGCTATACCATCCTTTGCTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGGACTTATGAGTATTCTGACTATAACAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATAGAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATATTCATGATATAAGGTATTACTACAAAAAGCGGAAGAAGCCGAGCGACAAGAAAAATTCCCGCTGCTACCATCGTAGCAGCATGTATAAGAGCCGAAATGGGGGTAGGACCCTCCATAGCATCAGGTTGAGATGCTTTCTATTGATAAAAGCGCTCCTCGCGACTTCAGAAGCCGAACCCAAAGGCGATGCTTTTGTCGAGGCTGGAACTTTTGGCGATGAGACTTTCGAAGCACTTATTCTTTCTGATAAGCGAAGCTGTTGGTGA

Coding sequence (CDS)

ATGATTGTTCTAAAATGGCTATTCCTCACAATTGCTCCTTGTGATGCAGCGGAACCATGGCAATTAGGATCTCAAGACGCAGCAACACCTATGATGCAAGGAATAATAGACTTACATCACGATATCTTTTTCTTCCTCATTCTGATTTTTGTTTTCGTATCACGGATCTTGGTTCGCGCTTTATGGCATTTCCACTATCAAAAAAATCAAATACCGCAAAGGATTGTTCATGGAACTACTATCGAGATTCTTTGGACCATTTTTCCTAGTATCATTCCGATGTTCATTGCTATACCATCCTTTGCTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGGACTTATGAGTATTCTGACTATAACAGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATCTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATAGAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATATTCATGATATAAGGTATTACTACAAAAAGCGGAAGAAGCCGAGCGACAAGAAAAATTCCCGCTGCTACCATCGTAGCAGCATGTATAAGAGCCGAAATGGGGGTAGGACCCTCCATAGCATCAGGTTGAGATGCTTTCTATTGATAAAAGCGCTCCTCGCGACTTCAGAAGCCGAACCCAAAGGCGATGCTTTTGTCGAGGCTGGAACTTTTGGCGATGAGACTTTCGAAGCACTTATTCTTTCTGATAAGCGAAGCTGTTGGTGA

Protein sequence

MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRALWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADIHDIRYYYKKRKKPSDKKNSRCYHRSSMYKSRNGGRTLHSIRLRCFLLIKALLATSEAEPKGDAFVEAGTFGDETFEALILSDKRSCW
Homology
BLAST of CcUC06G119040 vs. NCBI nr
Match: YP_009913658.1 (cytochrome c oxidase subunit 2 [Luffa acutangula] >QLJ93008.1 cytochrome c oxidase subunit 2 [Luffa acutangula])

HSP 1 Score: 371.3 bits (952), Expect = 7.1e-99
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. NCBI nr
Match: XP_023553509.1 (uncharacterized protein LOC111810906 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553510.1 uncharacterized protein LOC111810906 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 366.3 bits (939), Expect = 2.3e-97
Identity = 180/185 (97.30%), Postives = 185/185 (100.00%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLIL+FVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILLFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY++NQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYKQNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDE+SLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEESLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. NCBI nr
Match: AEN56105.1 (cytochrome c oxidase subunit 2 [Cucumis melo subsp. melo] >AZP40299.1 cytochrome c oxidase subunit 2 [Cucumis melo var. momordica])

HSP 1 Score: 365.5 bits (937), Expect = 3.9e-97
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY K +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYSKKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. NCBI nr
Match: YP_004849352.1 (cytochrome c oxidase subunit 2 [Cucumis sativus] >ADZ10779.1 cytochrome c oxidase subunit 2 [Cucumis sativus])

HSP 1 Score: 364.0 bits (933), Expect = 1.1e-96
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY + +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYSQKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. NCBI nr
Match: KAE8648249.1 (hypothetical protein Csa_018529 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 3.3e-96
Identity = 179/185 (96.76%), Postives = 182/185 (98.38%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQD ATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDTATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY + +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYSQKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. ExPASy Swiss-Prot
Match: P05491 (Cytochrome c oxidase subunit 2 OS=Glycine max OX=3847 GN=COX2 PE=3 SV=2)

HSP 1 Score: 347.1 bits (889), Expect = 1.9e-94
Identity = 172/181 (95.03%), Postives = 177/181 (97.79%), Query Frame = 0

Query: 5   KWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRALWHF 64
           +WLFLTIAPCDAAEPWQLG QDAATPMMQGIIDLHHDIFFFLILI VFVSRILVRALWHF
Sbjct: 4   EWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWHF 63

Query: 65  HYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGHQ 124
           HY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSMDEVVVDPA+TIKAIGHQ
Sbjct: 64  HYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKAIGHQ 123

Query: 125 WYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPAD 184
           WYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIVTPAD
Sbjct: 124 WYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIVTPAD 183

Query: 185 I 186
           +
Sbjct: 184 V 184

BLAST of CcUC06G119040 vs. ExPASy Swiss-Prot
Match: P08744 (Cytochrome c oxidase subunit 2 OS=Pisum sativum OX=3888 GN=COX2 PE=3 SV=2)

HSP 1 Score: 343.6 bits (880), Expect = 2.1e-93
Identity = 171/182 (93.96%), Postives = 176/182 (96.70%), Query Frame = 0

Query: 4   LKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRALWH 63
           L+WLFLTIAPCDAAEPWQLG QDAATPMMQGIIDLHHDIFFFLILI VFVSRILVRALWH
Sbjct: 3   LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWH 62

Query: 64  FHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGH 123
           FHY+KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSMD V+VDPAMTIKAIGH
Sbjct: 63  FHYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDGVLVDPAMTIKAIGH 122

Query: 124 QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPA 183
           QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQS LLEVDNRVV+PAKTHLRIIVTPA
Sbjct: 123 QWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSGLLEVDNRVVVPAKTHLRIIVTPA 182

Query: 184 DI 186
           D+
Sbjct: 183 DV 184

BLAST of CcUC06G119040 vs. ExPASy Swiss-Prot
Match: P93285 (Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=COX2 PE=1 SV=2)

HSP 1 Score: 334.3 bits (856), Expect = 1.3e-90
Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLF TI+PCDAAEPWQLG QDAATP+MQGIIDLHHDIFFFLILI VFV  ILVRA
Sbjct: 1   MIVLKWLFFTISPCDAAEPWQLGFQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEILWTIFPSII MFIAIPSFALLYSMDEVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWY TYEYSDYNSSDEQSLTFDSY IPE+DLELGQ RLLEVDNRVV+PAKTHLRIIV
Sbjct: 121 IGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEEDLELGQLRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADI 186
           T AD+
Sbjct: 181 TSADV 185

BLAST of CcUC06G119040 vs. ExPASy Swiss-Prot
Match: P98012 (Cytochrome c oxidase subunit 2 OS=Beta vulgaris OX=161934 GN=COX2 PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.8e-90
Identity = 166/185 (89.73%), Postives = 175/185 (94.59%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIV +WLF T+APCDAAEPWQLG QDAATPMMQGIIDLHHDIFFFLILI VFVS ILVRA
Sbjct: 1   MIVREWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEI+ TIFPSII MFIAIPSFALLYSMDEVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNPIPQRIVHGTTIEIIRTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYR+YEYSDYNSSDEQSLTFDSYTIPEDD ELGQSRLLEVDNRVV+PAKTH+RIIV
Sbjct: 121 IGHQWYRSYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEVDNRVVVPAKTHIRIIV 180

Query: 181 TPADI 186
           T AD+
Sbjct: 181 TSADV 185

BLAST of CcUC06G119040 vs. ExPASy Swiss-Prot
Match: P27168 (Cytochrome c oxidase subunit 2 OS=Daucus carota OX=4039 GN=COX2 PE=3 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.4e-89
Identity = 166/178 (93.26%), Postives = 170/178 (95.51%), Query Frame = 0

Query: 8   FLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRALWHFHYQ 67
           F T +PCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILI VFVSRILVRALWHFH +
Sbjct: 9   FFTNSPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWHFHSK 68

Query: 68  KNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYR 127
           KN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYR
Sbjct: 69  KNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYR 128

Query: 128 TYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADI 186
           TYEYSDYNSSDEQSLTFDSYTIPEDD ELGQSRLLEVDNRVV+PAKTHLRIIVT AD+
Sbjct: 129 TYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEVDNRVVVPAKTHLRIIVTSADV 186

BLAST of CcUC06G119040 vs. ExPASy TrEMBL
Match: A0A7D6C0E1 (Cytochrome c oxidase subunit 2 OS=Luffa acutangula OX=56866 GN=cox2 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 3.4e-99
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. ExPASy TrEMBL
Match: G3EU21 (Cytochrome c oxidase subunit 2 OS=Cucumis melo subsp. melo OX=412675 GN=cox2 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.9e-97
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY K +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYSKKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. ExPASy TrEMBL
Match: A0A3S9JIH4 (Cytochrome c oxidase subunit 2 OS=Cucumis melo var. momordica OX=2034244 GN=cox2 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.9e-97
Identity = 181/185 (97.84%), Postives = 183/185 (98.92%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY K +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYSKKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. ExPASy TrEMBL
Match: G3EJ04 (Cytochrome c oxidase subunit 2 OS=Cucumis sativus OX=3659 GN=cox2 PE=3 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 5.5e-97
Identity = 180/185 (97.30%), Postives = 183/185 (98.92%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA
Sbjct: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY + +IPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA
Sbjct: 61  LWHFHYSQKKIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. ExPASy TrEMBL
Match: A0A5J6NGZ2 (Cytochrome c oxidase subunit 2 OS=Cercis canadensis OX=49801 GN=cox2 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.3e-94
Identity = 177/185 (95.68%), Postives = 181/185 (97.84%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVL+WLFLTIAPCDAAEPWQLG QDAATPMMQGIIDLHHDIFFFLILI VFVSRILVRA
Sbjct: 1   MIVLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHYQKN IPQRIVHGTTIEIL TIFPSIIPMFIAIPSFALLYSMDEVVVDPA+TIKA
Sbjct: 61  LWHFHYQKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVV+PAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADI 186
           TPAD+
Sbjct: 181 TPADV 185

BLAST of CcUC06G119040 vs. TAIR 10
Match: ATMG00160.1 (cytochrome oxidase 2 )

HSP 1 Score: 339.0 bits (868), Expect = 3.6e-93
Identity = 170/185 (91.89%), Postives = 177/185 (95.68%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTI+PCDAAEPWQLGSQDAATP+MQGIIDLHHDIFFFLILI VFV  ILVRA
Sbjct: 1   MIVLKWLFLTISPCDAAEPWQLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKA 120
           LWHFHY+KN IPQRIVHGTTIEIL TIFPSII MFIAIPSFALLYSMDEVVVDPA+TIKA
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILRTIFPSIISMFIAIPSFALLYSMDEVVVDPAITIKA 120

Query: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIV 180
           IGHQWYRTYEYSDYNSSDEQSLTFDSY IPE+DLELGQSRLLEVDNRVV+PAKTHLRIIV
Sbjct: 121 IGHQWYRTYEYSDYNSSDEQSLTFDSYMIPEEDLELGQSRLLEVDNRVVVPAKTHLRIIV 180

Query: 181 TPADI 186
           T AD+
Sbjct: 181 TSADV 185

BLAST of CcUC06G119040 vs. TAIR 10
Match: AT2G07695.1 (Cytochrome C oxidase subunit II-like, transmembrane domain )

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-44
Identity = 89/103 (86.41%), Postives = 93/103 (90.29%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTI+PCDAAEPWQLGSQDAATP+MQGIIDLHHDIFFFLILI VFV  ILVRA
Sbjct: 1   MIVLKWLFLTISPCDAAEPWQLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFAL 104
           LWHFHY+KN IPQRIVHGTTIEIL TIFP  I +FI  PSFAL
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILRTIFPCFISIFIVEPSFAL 103

BLAST of CcUC06G119040 vs. TAIR 10
Match: ATMG01280.1 (Cytochrome C oxidase subunit II-like, transmembrane domain )

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-44
Identity = 89/103 (86.41%), Postives = 93/103 (90.29%), Query Frame = 0

Query: 1   MIVLKWLFLTIAPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILIFVFVSRILVRA 60
           MIVLKWLFLTI+PCDAAEPWQLGSQDAATP+MQGIIDLHHDIFFFLILI VFV  ILVRA
Sbjct: 1   MIVLKWLFLTISPCDAAEPWQLGSQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRA 60

Query: 61  LWHFHYQKNQIPQRIVHGTTIEILWTIFPSIIPMFIAIPSFAL 104
           LWHFHY+KN IPQRIVHGTTIEIL TIFP  I +FI  PSFAL
Sbjct: 61  LWHFHYKKNAIPQRIVHGTTIEILRTIFPCFISIFIVEPSFAL 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YP_009913658.17.1e-9999.46cytochrome c oxidase subunit 2 [Luffa acutangula] >QLJ93008.1 cytochrome c oxida... [more]
XP_023553509.12.3e-9797.30uncharacterized protein LOC111810906 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
AEN56105.13.9e-9797.84cytochrome c oxidase subunit 2 [Cucumis melo subsp. melo] >AZP40299.1 cytochrome... [more]
YP_004849352.11.1e-9697.30cytochrome c oxidase subunit 2 [Cucumis sativus] >ADZ10779.1 cytochrome c oxidas... [more]
KAE8648249.13.3e-9696.76hypothetical protein Csa_018529 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
P054911.9e-9495.03Cytochrome c oxidase subunit 2 OS=Glycine max OX=3847 GN=COX2 PE=3 SV=2[more]
P087442.1e-9393.96Cytochrome c oxidase subunit 2 OS=Pisum sativum OX=3888 GN=COX2 PE=3 SV=2[more]
P932851.3e-9090.27Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=COX2 PE=1 SV=2[more]
P980124.8e-9089.73Cytochrome c oxidase subunit 2 OS=Beta vulgaris OX=161934 GN=COX2 PE=2 SV=1[more]
P271682.4e-8993.26Cytochrome c oxidase subunit 2 OS=Daucus carota OX=4039 GN=COX2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A7D6C0E13.4e-9999.46Cytochrome c oxidase subunit 2 OS=Luffa acutangula OX=56866 GN=cox2 PE=3 SV=1[more]
G3EU211.9e-9797.84Cytochrome c oxidase subunit 2 OS=Cucumis melo subsp. melo OX=412675 GN=cox2 PE=... [more]
A0A3S9JIH41.9e-9797.84Cytochrome c oxidase subunit 2 OS=Cucumis melo var. momordica OX=2034244 GN=cox2... [more]
G3EJ045.5e-9797.30Cytochrome c oxidase subunit 2 OS=Cucumis sativus OX=3659 GN=cox2 PE=3 SV=1[more]
A0A5J6NGZ23.3e-9495.68Cytochrome c oxidase subunit 2 OS=Cercis canadensis OX=49801 GN=cox2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00160.13.6e-9391.89cytochrome oxidase 2 [more]
AT2G07695.11.1e-4486.41Cytochrome C oxidase subunit II-like, transmembrane domain [more]
ATMG01280.11.1e-4486.41Cytochrome C oxidase subunit II-like, transmembrane domain [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01166CYCOXIDASEIIcoord: 89..109
score: 57.85
coord: 77..89
score: 52.21
coord: 160..181
score: 61.01
coord: 112..131
score: 64.43
NoneNo IPR availablePANTHERPTHR22888CYTOCHROME C OXIDASE, SUBUNIT IIcoord: 1..185
IPR002429Cytochrome c oxidase subunit II-like C-terminalPFAMPF00116COX2coord: 116..185
e-value: 1.3E-22
score: 80.0
IPR002429Cytochrome c oxidase subunit II-like C-terminalPROSITEPS50857COX2_CUAcoord: 113..255
score: 16.256529
IPR011759Cytochrome C oxidase subunit II, transmembrane domainPFAMPF02790COX2_TMcoord: 17..103
e-value: 6.1E-30
score: 103.2
IPR011759Cytochrome C oxidase subunit II, transmembrane domainPROSITEPS50999COX2_TMcoord: 16..111
score: 24.819632
IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyGENE3D1.10.287.90coord: 1..111
e-value: 4.3E-36
score: 125.2
IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilySUPERFAMILY81464Cytochrome c oxidase subunit II-like, transmembrane regioncoord: 7..110
IPR008972CupredoxinGENE3D2.60.40.420coord: 113..196
e-value: 9.9E-15
score: 56.7
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 113..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G119040.1CcUC06G119040.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0070469 respirasome
cellular_component GO:0016020 membrane
molecular_function GO:0005507 copper ion binding
molecular_function GO:0004129 cytochrome-c oxidase activity