CcUC06G118830 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G118830
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description(thale cress) hypothetical protein
LocationCicolChr06: 14360512 .. 14363154 (+)
RNA-Seq ExpressionCcUC06G118830
SyntenyCcUC06G118830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTGCATGACCCCTGCAGATTTGACTCTATCTACACTCGGAGCCAATCCCCTATCGGTCCTGCCACCACGCCGCAGAACGGGAGCTCGTGTGGAACCTTTTCTTTCTGGCGTAACTGCGGTGAAACGTAACAAAATCTTACGGTCGCGTAATAGAAGGGCCGGAGGTACGGTAAACTCGGCCAAAATATGACACCCGAAGGGCCCGGCGCGCACAATCCTTCTTCTTCAGTAAAGCCGACCTCTTTTTCGCCAGTGCTGATGCAGTGCGCACGTAGATAAGGAAAGCCAAGGCGGCTTTGCTCATGAGTGAGCGATCAAGCGGAAAAGGACCTGCTGGTTTCTTGTCTTTCTGGAGCAGAGCTGCCTTGCTCGTAGCTCCCTATTGATATAAAAAGGGATGGATGAAGGATGAAAGAAAAAATCAGAAGCAAGTCTTGAGGGAGTAAAGAACCACCGTTAAGTGGTTCTGCGCCAAGTGCGATCGATTGTCCTTCCTTTCGAGGACGCGCTTTCGGATATACCGCCGTAGGCTTTTCTCCTGATCGAGAAAGAGCGTTTACCTCGCTGCTAGGAAGAGAGGAAGGAACATGAGGCATCCTTCTTTCAGGAGCTCAGACTCCAGTTCGATCGTTAGAAGGAAGGCGAGTGCGGAGGCAAAGTGAATTCTGAACGGTCTGTGCCTGAAACTGAACTCACTTCTTTTTCGATTTATAGATTTATATTAGGCATCCCCAGTTGGGGCTATGGCAGATGGATGAATTTCATTTCATGCATTGCTTCCTACTCATACTTTCACTTCCAACTTGCTGTCCGCTCCCCTTCACTTTCTTTGCTGGACAGGAAGATGCGAATTGCAAAGGTATCAAGATCAAAAAGTAGAGGCAAGGTTAGAGCCTGATGATGGGGAAAACCCAACGTGGCAAAAAGCAGCGGATCTCCCCTTATTTTGGGAAAGCTGGTGGCCGCGTGTGAATTCTTTCAAGGCAAGGGGCCTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCGTTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGACCGAGTCTTTCTGGCCCCTGTGAACCATCTCTGGTTCTTGGTAATGCCATCTGTCCTTTTGCGCCTCATACGCCGGCTCCAAGAATTTCTTTTCTAAAGACTATATGCTGGTAATGCTGGGGCACGCCTTAAAGTAAAGTGCTCCTCCCCAGGTCCACCGTCGTCAACTATCGATGACCTGCCTGAAGTGTTCTTCCAGCGCTTCATAGTCTTTATATAGTCTTTCTCGTAAACCTGTAGAGCAGCTCATCAAAAAACGTTTCCCAAGTCGTGTTGCAACCCTTTTACCTTATCAGTCATAAGGCTGGTTTTTGGTATCATATATCGAGATAATTATTATGATTAAGCTATTCCACTGGTGTGACTTAGATACCCTTTCTTTGTGGTATCAGTCATGCTATTTGAATAGCCTTCAATCATCATAGCCTCTCCACCGGTTCCGAAGACTCTTTCGGCATCAATGTGCTCCAATGAAAGAGATAAGACCCTTTCCTAGTGAGAGAGTCCAACCAACCAACTAGCGGGAGGGGGGATCCCTTGTACAGAAAAGAAAGGGAGAAAATGGCAGAATGCACCCTCCTTTCGGAGATCAAGAAGTCAGTTTGTTGGAATGCTCTAGATGCCGTGCCTTGTGCATGACAATACACAAGCAAGACTGTTCGTCTAGTGGTATTCTGTATCTTATATAAGATCTGTGTCCTTACCCTATGCATGGTATTTCGTTAGTGAAAGATCTATTCTAGCCGTACTTTGACCTTGTGAAACTCTCTTATCTTATTGAGATTGAAGGCTCTATTCTGGCTACTGCTAAAAGAGATGGTGGACCCTTTCGACGTTGCACAAAAGCCATTACTTTACGTTCAGCTAGCACTAAAAAGGCTACTCCTAGTAGAAGTGGTAGAATTATTCCAAGCAGACCTTTTCTCCCTTTTCTCAAAGAGAAACAGGGCGATGCGGCTTGATGTCTCAGACCATAAGGATAGAAAAAGGCAATGTAACAAGGGGCCAAGCGTACCTCCCGTTCAGGAACAGGATGAGGCAGAAGTACTTGCCGCGCATACTAGTGCCAATTAGATCAAACGGTTCCAACTCAATGTATGCCTTCGGTTAAAAAGGTAGACAGAGTAAACGTCAAGAATCACAGCGTTACCTTACCTTCACCATGATACGGACTCCAAGTTCTTATGGCGGAGCACGAGGGGATTTATCATCAATATGATGATGGGAATGGAAACCAGAAGCACGACCGGGGTCCAAGATAATAAAACCGCAGTTCCCTCCTACGTTGCACCTATGATGCTGCTTTGTGGGTCTGGTTCGTGGAACTCATCGAAGAGCCCAATATCGTAGTGGTTGTGGGCCCCCGCAAAATTCTTTCTTCTTGAACTTGCGAAATCGATTTTGAGTACTTTTGATAGGAAGTGAAAAACGAGTGGGGCTGCCGCCGCCTGATAGAGGCAGAAGCCGGGGCCACCGGAGCCTATCTGTGTCGAGTGTGTCGATTGAAAGAGGAGGAGAGACAACTCAAATGCCAGCACACGGTTTTGAATGAGAGAAAGAAGTGA

mRNA sequence

ATGTATTTGCATGACCCCTGCAGATTTGACTCTATCTACACTCGGAGCCAATCCCCTATCGGTCCTGCCACCACGCCGCAGAACGGGAGCTCGTGTGGAACCTTTTCTTTCTGGCGAAGATGCGAATTGCAAAGGTATCAAGATCAAAAAGTAGAGGCAAGGTTAGAGCCTGATGATGGGGAAAACCCAACGTGGCAAAAAGCAGCGGATCTCCCCTTATTTTGGGAAAGCTGGTGGCCGCGTGTGAATTCTTTCAAGGCAAGGGGCCTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCGTTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGACCGAGTCTTTCTGGCCCCTGTGAACCATCTCTGGTTCTTGGAAGTGAAAAACGAGTGGGGCTGCCGCCGCCTGATAGAGGCAGAAGCCGGGGCCACCGGAGCCTATCTGTGTCGAGTGTGTCGATTGAAAGAGGAGGAGAGACAACTCAAATGCCAGCACACGGTTTTGAATGAGAGAAAGAAGTGA

Coding sequence (CDS)

ATGTATTTGCATGACCCCTGCAGATTTGACTCTATCTACACTCGGAGCCAATCCCCTATCGGTCCTGCCACCACGCCGCAGAACGGGAGCTCGTGTGGAACCTTTTCTTTCTGGCGAAGATGCGAATTGCAAAGGTATCAAGATCAAAAAGTAGAGGCAAGGTTAGAGCCTGATGATGGGGAAAACCCAACGTGGCAAAAAGCAGCGGATCTCCCCTTATTTTGGGAAAGCTGGTGGCCGCGTGTGAATTCTTTCAAGGCAAGGGGCCTGATCGACATTCTTGTTGACTCTGATCCGGTCGAGGTGGTTTTCGTTTACCAGCGCGTAGGTGGTCTAAGTTCCTATGACCGAGTCTTTCTGGCCCCTGTGAACCATCTCTGGTTCTTGGAAGTGAAAAACGAGTGGGGCTGCCGCCGCCTGATAGAGGCAGAAGCCGGGGCCACCGGAGCCTATCTGTGTCGAGTGTGTCGATTGAAAGAGGAGGAGAGACAACTCAAATGCCAGCACACGGTTTTGAATGAGAGAAAGAAGTGA

Protein sequence

MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWRRCELQRYQDQKVEARLEPDDGENPTWQKAADLPLFWESWWPRVNSFKARGLIDILVDSDPVEVVFVYQRVGGLSSYDRVFLAPVNHLWFLEVKNEWGCRRLIEAEAGATGAYLCRVCRLKEEERQLKCQHTVLNERKK
Homology
[Close]
BLAST of CcUC06G118830 vs. NCBI nr
Match: KAG9438866.1 (hypothetical protein H6P81_021164 [Aristolochia fimbriata])

HSP 1 Score: 78.6 bits (192), Expect = 6.1e-11
Identity = 33/39 (84.62%), Postives = 33/39 (84.62%), Query Frame = 0 

Query: 1  MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWR 40
          MYLHDPC FD  YTRSQSP GPATTPQNGSSCGT  FWR
Sbjct: 1  MYLHDPCGFDPTYTRSQSPSGPATTPQNGSSCGTLDFWR 39

[Close]
BLAST of CcUC06G118830 vs. NCBI nr
Match: RLM65673.1 (hypothetical protein C2845_PM16G00610 [Panicum miliaceum])

HSP 1 Score: 75.5 bits (184), Expect = 5.2e-10
Identity = 32/39 (82.05%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 1  MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWR 40
          MYLHDPC FD  YTRSQSP GPATTPQN SSCGT  FWR
Sbjct: 1  MYLHDPCGFDPTYTRSQSPSGPATTPQNRSSCGTLDFWR 39

[Close]
BLAST of CcUC06G118830 vs. NCBI nr
Match: RWW39282.1 (hypothetical protein BHE74_00055401 [Ensete ventricosum])

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-07
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 1   MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWR 40
           MY HD  RF + YT+SQSP GPATTPQNGSSCGTFSF R
Sbjct: 83  MYFHDSLRFYTTYTQSQSPSGPATTPQNGSSCGTFSFLR 121

[Close]
BLAST of CcUC06G118830 vs. NCBI nr
Match: RWV78353.1 (hypothetical protein GW17_00060694 [Ensete ventricosum] >RZR97436.1 hypothetical protein BHM03_00026620 [Ensete ventricosum])

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-07
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 1   MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWR 40
           MY HD  RF + YT+SQSP GPATTPQNGSSCGTFSF R
Sbjct: 162 MYFHDSLRFYTTYTQSQSPSGPATTPQNGSSCGTFSFLR 200

[Close]
BLAST of CcUC06G118830 vs. NCBI nr
Match: CAD5336205.1 (unnamed protein product [Arabidopsis thaliana])

HSP 1 Score: 61.6 bits (148), Expect = 7.8e-06
Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = 0 

Query: 67  KAADLPLFWESWWPRVNSFKARG--LIDILVDSDPVEVVFVYQR 109
           K +  PLF  +WWPRVNSFKARG  +  +L  SDPVEVVFVYQR
Sbjct: 245 KLSSFPLFTFNWWPRVNSFKARGGLISTLLFHSDPVEVVFVYQR 288

[Close]
BLAST of CcUC06G118830 vs. ExPASy TrEMBL
Match: A0A3L6PX53 (Uncharacterized protein OS=Panicum miliaceum OX=4540 GN=C2845_PM16G00610 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.5e-10
Identity = 32/39 (82.05%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 1  MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWR 40
          MYLHDPC FD  YTRSQSP GPATTPQN SSCGT  FWR
Sbjct: 1  MYLHDPCGFDPTYTRSQSPSGPATTPQNRSSCGTLDFWR 39

[Close]
BLAST of CcUC06G118830 vs. ExPASy TrEMBL
Match: A0A444BXI8 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00060694 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 6.9e-08
Identity = 30/39 (76.92%), Postives = 32/39 (82.05%), Query Frame = 0 

Query: 1   MYLHDPCRFDSIYTRSQSPIGPATTPQNGSSCGTFSFWR 40
           MY HD  RF + YT+SQSP GPATTPQNGSSCGTFSF R
Sbjct: 162 MYFHDSLRFYTTYTQSQSPSGPATTPQNGSSCGTFSFLR 200

[Close]
BLAST of CcUC06G118830 vs. ExPASy TrEMBL
Match: A0A7G2FJT7 ((thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS23413 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 3.8e-06
Identity = 29/44 (65.91%), Postives = 33/44 (75.00%), Query Frame = 0 

Query: 67  KAADLPLFWESWWPRVNSFKARG--LIDILVDSDPVEVVFVYQR 109
           K +  PLF  +WWPRVNSFKARG  +  +L  SDPVEVVFVYQR
Sbjct: 245 KLSSFPLFTFNWWPRVNSFKARGGLISTLLFHSDPVEVVFVYQR 288

[Close]
BLAST of CcUC06G118830 vs. ExPASy TrEMBL
Match: A0A6N2KW01 (Proton_antipo_M domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS82198 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-04
Identity = 25/29 (86.21%), Postives = 25/29 (86.21%), Query Frame = 0 

Query: 9  FDSIYTRSQSPIGPATTPQNGSSCGTFSF 38
          FD IYTR QSPIGPA TPQN SSCGTFSF
Sbjct: 51 FDPIYTRRQSPIGPAITPQNESSCGTFSF 79

[Close]
BLAST of CcUC06G118830 vs. ExPASy TrEMBL
Match: A0A6A1VIG5 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G005014 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.0e-04
Identity = 28/32 (87.50%), Postives = 28/32 (87.50%), Query Frame = 0 

Query: 137 CRRLIEAEAGATGAYLCRVCRLKEEERQLKCQ 169
           CRRLIEAEA ATGAYL RVCRLKEE RQLK Q
Sbjct: 14  CRRLIEAEAEATGAYLRRVCRLKEEGRQLKYQ 45

The following BLAST results are available for this feature:
BLAST of CcUC06G118830 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG9438866.16.1e-1184.62hypothetical protein H6P81_021164 [Aristolochia fimbriata][more]
RLM65673.15.2e-1082.05hypothetical protein C2845_PM16G00610 [Panicum miliaceum][more]
RWW39282.11.4e-0776.92hypothetical protein BHE74_00055401 [Ensete ventricosum][more]
RWV78353.11.4e-0776.92hypothetical protein GW17_00060694 [Ensete ventricosum] >RZR97436.1 hypothetical... [more]
CAD5336205.17.8e-0665.91unnamed protein product [Arabidopsis thaliana][more]
BLAST of CcUC06G118830 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC06G118830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A3L6PX532.5e-1082.05Uncharacterized protein OS=Panicum miliaceum OX=4540 GN=C2845_PM16G00610 PE=4 SV... [more]
A0A444BXI86.9e-0876.92Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00060694 PE=4 SV=1[more]
A0A7G2FJT73.8e-0665.91(thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOC... [more]
A0A6N2KW012.1e-0486.21Proton_antipo_M domain-containing protein OS=Salix viminalis OX=40686 GN=SVIM_LO... [more]
A0A6A1VIG56.0e-0487.50Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR5G005014 PE=4 SV=1[more]
BLAST of CcUC06G118830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G118830.1CcUC06G118830.1mRNA