CcUC06G118550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G118550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	bark storage protein A
Location	CicolChr06: 13327147 .. 13328048 (-)
RNA-Seq Expression	CcUC06G118550
Synteny	CcUC06G118550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAACCTTTCAAACAATGTCTGGTACCAACCAGAAAAGATATTTCCTGTCAATGGAACTCCTGAAATCAGACAACATGTTTTTTGGATTCCTATGGACAAATACTACTTTTCAGTGACCAAGAAACTTGAGGTACTTGTTTGCCTTACCCCACTATCTTCATAATTGAAACAATCATGTTCTAAGTCTATGATCCTAGAGTAGATTAAGTTTTAAGTACTCAGATCAACCTCACTTGATTGGCTTGCTATATAAAGAGACAAGAAGAGAGCATAACAATCTACCATTTGAAGATTTAAAGCTCTCTCTAATTTGCATATGTATGTAATGAGGCCTTATGAAAAGTTCCAATTCCATGATAGAATACAAAACAGAATCACAGTGTATTTCGCTATAAAAGGTAAGAGCTACAAGATAACAAAAGTATTCAAGGCACTTGGAACCTCCCCTTTCTTGAGTATACCAACGCAAGCCTAAAATCATCAAATCGATTCTCTAACTCAATCATTTTCCCCTTCTATTTATAACCAAATACTCTTTTAGTACCCTCATAGCATTTCTATCCTTTTGTTTGAACAAATAGGTTCTGCATATATGAATGTTATGTTTGAAGATACATTTTTCATGATTGAAGGGATTGAAGTTTTGGGTGTCTGAATTCAACGAATTGCTTACCAAGAGCGCCTGTTGTAGTGAGAGTGCAAAGAGGGGTCAGTGCCAATATGTTTGTTTCCAATAAAGCTTACAAAGAGTTCCGGCAATCAACATTCAATGTGACTTGCTTTGACATGGAAACTCCAGCTGTGGCACTCGTCTGTCTTCAACAAAAGATACCCTTCATTGCAATTAGACCAGAGGCTCTGCTTTGTCCAATGAGGTTGCCGCCTTTGCTGTATTAG

mRNA sequence

ATGGGCAACCTTTCAAACAATGTCTGGTACCAACCAGAAAAGATATTTCCTGTCAATGGAACTCCTGAAATCAGACAACATGTTTTTTGGATTCCTATGGACAAATACTACTTTTCAGTGACCAAGAAACTTGAGGGATTGAAGTTTTGGGTGTCTGAATTCAACGAATTGCTTACCAAGAGCGCCTGTTGTAGTGAGAGTGCAAAGAGGGCTGTGGCACTCGTCTGTCTTCAACAAAAGATACCCTTCATTGCAATTAGACCAGAGGCTCTGCTTTGTCCAATGAGGTTGCCGCCTTTGCTGTATTAG

Coding sequence (CDS)

ATGGGCAACCTTTCAAACAATGTCTGGTACCAACCAGAAAAGATATTTCCTGTCAATGGAACTCCTGAAATCAGACAACATGTTTTTTGGATTCCTATGGACAAATACTACTTTTCAGTGACCAAGAAACTTGAGGGATTGAAGTTTTGGGTGTCTGAATTCAACGAATTGCTTACCAAGAGCGCCTGTTGTAGTGAGAGTGCAAAGAGGGCTGTGGCACTCGTCTGTCTTCAACAAAAGATACCCTTCATTGCAATTAGACCAGAGGCTCTGCTTTGTCCAATGAGGTTGCCGCCTTTGCTGTATTAG

Protein sequence

MGNLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKFWVSEFNELLTKSACCSESAKRAVALVCLQQKIPFIAIRPEALLCPMRLPPLLY

Homology

[Close]

BLAST of CcUC06G118550 vs. NCBI nr
Match: XP_038880578.1 (bark storage protein A-like [Benincasa hispida])

HSP 1 Score: 103.6 bits (257), Expect = 1.0e-18
Identity = 61/116 (52.59%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFW+P+DK+YFSV KKLEGLK              
Sbjct: 194 NLLNNVWYQPEEIFPVDGTPEIRQHVFWVPVDKHYFSVAKKLEGLKLEGCLNSTNCLPRA 253

Query: 63  --------WVS--------EFNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                    VS         + E L  T +    +    AVALVCLQQKIPFIAIR
Sbjct: 254 PVAVRVQRGVSANVFVDNKAYREFLQSTFNVTSIDMETAAVALVCLQQKIPFIAIR 309

[Close]

BLAST of CcUC06G118550 vs. NCBI nr
Match: KAA0062612.1 (bark storage protein A [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 5.1e-18
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YFS+ KKLEGLK              
Sbjct: 194 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFSLAKKLEGLKLERCLNSTNCLPRA 253

Query: 63  --------------WVSE--FNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                         +V    + E L  T +    +    AVALVCL+QKIPFIAIR
Sbjct: 254 PIAVRVQRSVSANVFVDNKAYREFLQSTFNVTSIDMETAAVALVCLRQKIPFIAIR 309

[Close]

BLAST of CcUC06G118550 vs. NCBI nr
Match: TYK29698.1 (bark storage protein A [Cucumis melo var. makuwa])

HSP 1 Score: 101.3 bits (251), Expect = 5.1e-18
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YFS+ KKLEGLK              
Sbjct: 194 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFSLAKKLEGLKLERCLNSTNCLPRA 253

Query: 63  --------------WVSE--FNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                         +V    + E L  T +    +    AVALVCL+QKIPFIAIR
Sbjct: 254 PIAVRVQRSVSANVFVDNKAYREFLQSTFNVTSIDMETAAVALVCLRQKIPFIAIR 309

[Close]

BLAST of CcUC06G118550 vs. NCBI nr
Match: XP_008462741.1 (PREDICTED: bark storage protein A [Cucumis melo])

HSP 1 Score: 101.3 bits (251), Expect = 5.1e-18
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YFS+ KKLEGLK              
Sbjct: 194 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFSLAKKLEGLKLERCLNSTNCLPRA 253

Query: 63  --------------WVSE--FNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                         +V    + E L  T +    +    AVALVCL+QKIPFIAIR
Sbjct: 254 PIAVRVQRSVSANVFVDNKAYREFLQSTFNVTSIDMETAAVALVCLRQKIPFIAIR 309

[Close]

BLAST of CcUC06G118550 vs. NCBI nr
Match: XP_022144877.1 (bark storage protein A [Momordica charantia] >XP_022144878.1 bark storage protein A [Momordica charantia] >XP_022144879.1 bark storage protein A [Momordica charantia] >XP_022144880.1 bark storage protein A [Momordica charantia] >XP_022144881.1 bark storage protein A [Momordica charantia])

HSP 1 Score: 100.9 bits (250), Expect = 6.7e-18
Identity = 61/116 (52.59%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YF   KKLEGLK              
Sbjct: 196 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFLAAKKLEGLKLEGCVNSTACLPRV 255

Query: 63  --------WVS--------EFNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                    VS         + E L  T +A   +    AVALVCLQQKIPFIAIR
Sbjct: 256 PVAVRVKRGVSANVFVDNKAYREFLQSTFNATPIDMETAAVALVCLQQKIPFIAIR 311

[Close]

BLAST of CcUC06G118550 vs. ExPASy TrEMBL
Match: A0A5A7V320 (Bark storage protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001130 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.5e-18
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YFS+ KKLEGLK              
Sbjct: 194 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFSLAKKLEGLKLERCLNSTNCLPRA 253

Query: 63  --------------WVSE--FNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                         +V    + E L  T +    +    AVALVCL+QKIPFIAIR
Sbjct: 254 PIAVRVQRSVSANVFVDNKAYREFLQSTFNVTSIDMETAAVALVCLRQKIPFIAIR 309

[Close]

BLAST of CcUC06G118550 vs. ExPASy TrEMBL
Match: A0A5D3E1P1 (Bark storage protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3607G00050 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.5e-18
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YFS+ KKLEGLK              
Sbjct: 194 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFSLAKKLEGLKLERCLNSTNCLPRA 253

Query: 63  --------------WVSE--FNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                         +V    + E L  T +    +    AVALVCL+QKIPFIAIR
Sbjct: 254 PIAVRVQRSVSANVFVDNKAYREFLQSTFNVTSIDMETAAVALVCLRQKIPFIAIR 309

[Close]

BLAST of CcUC06G118550 vs. ExPASy TrEMBL
Match: A0A1S3CI60 (bark storage protein A OS=Cucumis melo OX=3656 GN=LOC103501030 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.5e-18
Identity = 59/116 (50.86%), Postives = 69/116 (59.48%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YFS+ KKLEGLK              
Sbjct: 194 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFSLAKKLEGLKLERCLNSTNCLPRA 253

Query: 63  --------------WVSE--FNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                         +V    + E L  T +    +    AVALVCL+QKIPFIAIR
Sbjct: 254 PIAVRVQRSVSANVFVDNKAYREFLQSTFNVTSIDMETAAVALVCLRQKIPFIAIR 309

[Close]

BLAST of CcUC06G118550 vs. ExPASy TrEMBL
Match: A0A6J1CSW3 (bark storage protein A OS=Momordica charantia OX=3673 GN=LOC111014451 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.2e-18
Identity = 61/116 (52.59%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKF------------- 62
           NL NNVWYQPE+IFPV+GTPEIRQHVFWIP+DK+YF   KKLEGLK              
Sbjct: 196 NLLNNVWYQPEEIFPVDGTPEIRQHVFWIPVDKHYFLAAKKLEGLKLEGCVNSTACLPRV 255

Query: 63  --------WVS--------EFNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                    VS         + E L  T +A   +    AVALVCLQQKIPFIAIR
Sbjct: 256 PVAVRVKRGVSANVFVDNKAYREFLQSTFNATPIDMETAAVALVCLQQKIPFIAIR 311

[Close]

BLAST of CcUC06G118550 vs. ExPASy TrEMBL
Match: A0A6J1HA24 (bark storage protein A OS=Cucurbita moschata OX=3662 GN=LOC111461849 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.6e-17
Identity = 57/118 (48.31%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 1   MGNLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLKFW---------- 60
           + NL NNVWYQPE+IFPV+GTPEIRQ VFWIP+D+ YFS  KKLEGLK            
Sbjct: 190 LDNLLNNVWYQPEEIFPVDGTPEIRQRVFWIPVDRQYFSAAKKLEGLKLEGCVNSTACLP 249

Query: 61  -------------------VSEFNELL--TKSACCSESAKRAVALVCLQQKIPFIAIR 88
                                 + E L  T +    +    AVALVCLQQKIPFIAIR
Sbjct: 250 RAPVAVRVQRGVTANVFVDNKSYREFLHSTFNVTPIDMESAAVALVCLQQKIPFIAIR 307

[Close]

BLAST of CcUC06G118550 vs. TAIR 10
Match: AT4G28940.1 (Phosphorylase superfamily protein )

HSP 1 Score: 78.2 bits (191), Expect = 4.3e-15
Identity = 49/121 (40.50%), Postives = 56/121 (46.28%), Query Frame = 0


Query: 3   NLSNNVWYQPEKIFPVNGTPEIRQHVFWIPMDKYYFSVTKKLEGLK-------------- 62
           NL N VWYQPE+IFPV GTPE RQHVFWIP+DK Y  + +KLE  K              
Sbjct: 186 NLLNRVWYQPEEIFPVTGTPEERQHVFWIPVDKSYLKLARKLEDTKLPQCVNTTCLPRPP 245

Query: 63  ----------------------FWVSEFNELLTKSACCSESAKRAVALVCLQQKIPFIAI 88
                                 F  S+FN      A   E    AVAL+  QQ +PFI I
Sbjct: 246 KVTIVKRGMSASVFIDNAAYRTFLNSKFN------ATAVEMESAAVALISHQQNLPFIVI 300

The following BLAST results are available for this feature:

BLAST of CcUC06G118550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880578.1	1.0e-18	52.59	bark storage protein A-like [Benincasa hispida]	[more]
KAA0062612.1	5.1e-18	50.86	bark storage protein A [Cucumis melo var. makuwa]	[more]
TYK29698.1	5.1e-18	50.86	bark storage protein A [Cucumis melo var. makuwa]	[more]
XP_008462741.1	5.1e-18	50.86	PREDICTED: bark storage protein A [Cucumis melo]	[more]
XP_022144877.1	6.7e-18	52.59	bark storage protein A [Momordica charantia] >XP_022144878.1 bark storage protei...	[more]

BLAST of CcUC06G118550 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G118550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V320	2.5e-18	50.86	Bark storage protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold7...	[more]
A0A5D3E1P1	2.5e-18	50.86	Bark storage protein A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3CI60	2.5e-18	50.86	bark storage protein A OS=Cucumis melo OX=3656 GN=LOC103501030 PE=4 SV=1	[more]
A0A6J1CSW3	3.2e-18	52.59	bark storage protein A OS=Momordica charantia OX=3673 GN=LOC111014451 PE=4 SV=1	[more]
A0A6J1HA24	3.6e-17	48.31	bark storage protein A OS=Cucurbita moschata OX=3662 GN=LOC111461849 PE=4 SV=1	[more]

BLAST of CcUC06G118550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28940.1	4.3e-15	40.50	Phosphorylase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21234:SF42	PHOSPHORYLASE SUPERFAMILY PROTEIN	coord: 64..87 coord: 2..49
None	No IPR available	PANTHER	PTHR21234	PURINE NUCLEOSIDE PHOSPHORYLASE	coord: 64..87 coord: 2..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G118550.1	CcUC06G118550.1	mRNA