CcUC06G117620 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACATGATCTACACTATTCTTCTCTCCCGTTGTGGAAGCTCCTACCCTCTGTTTTGTCATTGTTTTATTTATCACCAGCTACCCGATAAATGTGGATTAGATTACAATGTTCTTCTCTCTAATTCTTCTCTCCGATTTTGGAAGCAGAGCAATCCACAACATGATCTAACACTTTTCTTCTCTCCCATTGTGAAAGCTTTTACCCTTTGCTTTTCTTTTCTCATTCTGTCATTGTGGATTAGATCACCTTGTTCTACACTTAGAAAATTCAATATAACTTGGATCAAACAACATTTAAACCTAAATAGCTAAATCGATTCAGACAAGAAATTCTCAAAAGTTACTTTTGCTCGTAAAAACTTCTTTCGACAGCTCCACTTAGAGAAATCCAGCGTACAAAACAAGAATAGAGTGACGAAACGAGTAGTGAAGCGAAGATTAAATAGAGCAAAATTTTAATGTCGTAATCGTAAGGAGAAATCACTGAAAGATACAGAGATATGCGTAGCTGCGGTTTTGCTTTATCAGGCACCGATTGACGTTGCTATTTACCAGTGATACCTCCGATTTTCTCTCCAAGAAGAGCCTTTCCGCCAGATGAAACTTCGCAGGTTTTGTTCCCTAAATCAGCACGGCCTCCTTCTACTTGCGTCAGAGTAAAGGCCGCTGCCGTCAAAGAGGCGATTGTTTCCATGGCTATCGAGATGACCTTTTACGAGCTTTTAGGAGTACCAGAGTCTGGGTCGATGGTAGAGATTAAGTAGGCCTACAAGCAGATGGTTCTGAAATATCATCCGGACGTTTCGTCGCCAGACCAGATTGAGGAGTATACGAGGAAGTTCATCAAGGTTTAGGAGGCGTACGAGACGTTGTTCGATCCTAGTATGAGAGCTTTGTATGATAGAGACATGGCGAGAGGTCTTCACCTTGCTTTCTCTACTCGAAGACGCGGCTACAACCATGAGGTATGTTTCTTGGCTATTTTTGAGTTCAAAATTGGTTGCGGAATCAATTAGGATGCTTTCTCTACCTTATTATATTGCAATTTATTTTGTTATATTGAATTGATTTTACCTGTTTTGAACAATTTCGCCTCCTGATCCTGAATTCTTGTTAATTTCTCTGACCTTATTCATTTCTTCAACCTGGATTACTCCAAGCACTTAGTCTTGGTTTTCATTTGTTTTTGAATTGCTGCTTTGATTCCTCATTTACGCGTTTTGCTTCTACATGAATTGGCGTAGGAATTGAGCTGCAAAAATCCTGTAATTTGTTTTCTCATCCATTTACAAAAAGTGTATCTTCTTGCTACCTTTAATTAAATAGAATGTACAAACTACGAAGGTCAATTTTCGATAATGAATACTCTTGAGGGTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAACAATAGATTAATCATAATTTTTGGGCTTTTTTGTTTCTTGTTCTTTCTCTCTTTCATAAGATTGCAACATGCCCTCTTAAATAATTTGCAACATGGAGAAATCGCACAAGAACAATAATCCTTTCAATGACATTTCATGGCTTTTACTTTTTCGTTTCACCGTCCATTACTGAAAATTAAATCTAATCCTAATTCAAATGACTTATGTGCATCAAAACATGTATAATCTGGACCAAATCGTGACTCCTGCATGTAACTCATATGATAGATATTGGTTCTTTTAGTTCATATATCCAAATTTCCAATATTAAATCTGAACTTATCTTCTTTCCCTGCATTACTCAGGAAATAGAAGAGAAAAGTGGGTGGAAGAACCGTTGGCAGGATCAGCTATCAGGATTGAAGAGAAGAAGCATGAAAAGAGATTCAGGAGCAAACATGTCGTGGGGAGCTCGGATGCGCAGACAAAGGGACGAGCTTCAGGACGAAGATGTATAATTTGGTTCTTTCCCTGCTCTAATCTTTCAACCTTCCTGCACACAATTAATATAATATACAATAGCTAGATACAAGACCTTAGCTTACTAATTACTAGAACTTCTACTTCCTTTGTGAAACTCAAATAGCTTAGAGTATGCATATTGGGAAGAAGTTCCATAAGTAATGTAAATCACTAGAAAGTTAGTATTTAATGTATATATGGTATGTATATTATCTTAGAATAATCAATCAATGTTTACTTAATCATTCATGTTTTGTCCCAATTTGGTTTTTGAATATGTATATTGCTTTTCTTAAAACAGTCTTGTTTACCAATAATTTCTCTGTTTTCTTTTCTACTAAAATCGCTACTAGAACATGATTTCACTTTTCTTTTATAGTTTATAAATGTTGGTAGGAGTTAAACAACAAGTTGAAGCCCTCTTTTTGAGGGTCACCATGAATGCAAATTACTAGCCTTAAACCAATAAGGATCCATGGACAGAGAAACCTCCTAGAGGTGATGAGTTCGAATCATGAAGAAATTTATATACAATGATTAATAGGAGTATGTAGATTCATCAGTGTGGTAGCCTTAGTGAGTAAGTTTTTCTCCATGACCAATCGAAAATATGAACTTTTTTGTTGTTAACGCATGATTAGGTAGATAAGAAGCACAAATAAATCAAGTACCAGAGAAGAAGCTGCTACAAGAACTAAAGAAATAAAAACCCATGCTGAGAAGAAAAAGCAGATACAGACGCATGAGCAGTAGCTGTGTCGTGTCAATATGCAATATGCAAACAGATTACACGTTATTAGATCATGACAGAACCAATGGGCTGACGATGTGAAAAGTTTGCACAACAGGGCATGGAATTTAATGCGAAGGTGTCAGATCATCATGAGTTTACTTTTTCGACTTTTCAATTTAAAGGGGGAGAAAAGAGTTCAAGAGGCAAAAATTCTGCACAAATTCTCCCTCACTATAACCAACCTCCATTTCAAGCTCTTCTACGAAAAGGATTATGAGAATCTTCAGAGTCATCTCCCAGTGAGTGAGAACCTTCATCCTATGCCATTTATGTATCAGATAGCAACCATCTATTGCCAG CAACATGATCTACACTATTCTTCTCTCCCGTTGTGGAAGCTCCTACCCTCTGTTTTGTCATTGTTTTATTTATCACCAGCTACCCGATAAATGTGGATTAGATTACAATGTTCTTCTCTCTAATTCTTCTCTCCGATTTTGGAAGCAGAGCAATCCACAACATGATCTAACACTTTTCTTCTCTCCCATTGTGAAAGCTTTTACCCTTTGCTTTTCTTTTCTCATTCTGTCATTGTGGATTAGATCACCTTGTTCTACACTTAGAAAATTCAATATAACTTGGATCAAACAACATTTAAACCTAAATAGCTAAATCGATTCAGACAAGAAATTCTCAAAAGTTACTTTTGCTCGTAAAAACTTCTTTCGACAGCTCCACTTAGAGAAATCCAGCGTACAAAACAAGAATAGAGTGACGAAACGAGTAGTGAAGCGAAGATTAAATAGAGCAAAATTTTAATGTCGTAATCGTAAGGAGAAATCACTGAAAGATACAGAGATATGCGTAGCTGCGGTTTTGCTTTATCAGGCACCGATTGACGTTGCTATTTACCAGTGATACCTCCGATTTTCTCTCCAAGAAGAGCCTTTCCGCCAGATGAAACTTCGCAGGTTTTGTTCCCTAAATCAGCACGGCCTCCTTCTACTTGCGTCAGAGTAAAGGCCGCTGCCGTCAAAGAGGCGATTGTTTCCATGGCTATCGAGATGACCTTTTACGAGCTTTTAGGAGTACCAGAGTCTGGGTCGATGGTAGAGATTAAGTAGGCCTACAAGCAGATGGTTCTGAAATATCATCCGGACGTTTCGTCGCCAGACCAGATTGAGGAGTATACGAGGAAGTTCATCAAGGTTTAGGAGGCGTACGAGACGTTGTTCGATCCTAGTATGAGAGCTTTGTATGATAGAGACATGGCGAGAGGTCTTCACCTTGCTTTCTCTACTCGAAGACGCGGCTACAACCATGAGGAAATAGAAGAGAAAAGTGGGTGGAAGAACCGTTGGCAGGATCAGCTATCAGGATTGAAGAGAAGAAGCATGAAAAGAGATTCAGGAGCAAACATGTCGTGGGGAGCTCGGATGCGCAGACAAAGGGACGAGCTTCAGGACGAAGATGTATAATTTGGTTCTTTCCCTGCTCTAATCTTTCAACCTTCCTGCACACAATTAATATAATATACAATAGCTAGATACAAGACCTTAGCTTACTAATTACTAGAACTTCTACTTCCTTTGTGAAACTCAAATAGCTTAGAGTATGCATATTGGGAAGAAGTTCCATAAGTAATGTAAATCACTAGAAAGTTAGTATTTAATGTATATATGGTATGTATATTATCTTAGAATAATCAATCAATGTTTACTTAATCATTCATGTTTTGTCCCAATTTGGTTTTTGAATATGTATATTGCTTTTCTTAAAACAGTCTTGTTTACCAATAATTTCTCTGTTTTCTTTTCTACTAAAATCGCTACTAGAACATGATTTCACTTTTCTTTTATAGTTTATAAATGTTGGTAGGAGTTAAACAACAAGTTGAAGCCCTCTTTTTGAGGGTCACCATGAATGCAAATTACTAGCCTTAAACCAATAAGGATCCATGGACAGAGAAACCTCCTAGAGGTGATGAGTTCGAATCATGAAGAAATTTATATACAATGATTAATAGGAGTATGTAGATTCATCAGTGTGGTAGCCTTAGTGAGTAAGTTTTTCTCCATGACCAATCGAAAATATGAACTTTTTTGTTGTTAACGCATGATTAGGTAGATAAGAAGCACAAATAAATCAAGTACCAGAGAAGAAGCTGCTACAAGAACTAAAGAAATAAAAACCCATGCTGAGAAGAAAAAGCAGATACAGACGCATGAGCAGTAGCTGTGTCGTGTCAATATGCAATATGCAAACAGATTACACGTTATTAGATCATGACAGAACCAATGGGCTGACGATGTGAAAAGTTTGCACAACAGGGCATGGAATTTAATGCGAAGGTGTCAGATCATCATGAGTTTACTTTTTCGACTTTTCAATTTAAAGGGGGAGAAAAGAGTTCAAGAGGCAAAAATTCTGCACAAATTCTCCCTCACTATAACCAACCTCCATTTCAAGCTCTTCTACGAAAAGGATTATGAGAATCTTCAGAGTCATCTCCCAGTGAGTGAGAACCTTCATCCTATGCCATTTATGTATCAGATAGCAACCATCTATTGCCAG ATGAGAGCTTTGTATGATAGAGACATGGCGAGAGGTCTTCACCTTGCTTTCTCTACTCGAAGACGCGGCTACAACCATGAGGAAATAGAAGAGAAAAGTGGGTGGAAGAACCGTTGGCAGGATCAGCTATCAGGATTGAAGAGAAGAAGCATGAAAAGAGATTCAGGAGCAAACATGTCGTGGGGAGCTCGGATGCGCAGACAAAGGGACGAGCTTCAGGACGAAGATGTATAA MRALYDRDMARGLHLAFSTRRRGYNHEEIEEKSGWKNRWQDQLSGLKRRSMKRDSGANMSWGARMRRQRDELQDEDV Homology
BLAST of CcUC06G117620 vs. NCBI nr
Match: XP_023549024.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 133.3 bits (334), Expect = 9.1e-28 Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = 0
BLAST of CcUC06G117620 vs. NCBI nr
Match: XP_038875872.1 (chaperone protein dnaJ 20, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 129.0 bits (323), Expect = 1.7e-26 Identity = 62/76 (81.58%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of CcUC06G117620 vs. NCBI nr
Match: XP_023006292.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 128.6 bits (322), Expect = 2.3e-26 Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CcUC06G117620 vs. NCBI nr
Match: XP_022959157.1 (chaperone protein dnaJ 20, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 128.3 bits (321), Expect = 2.9e-26 Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
BLAST of CcUC06G117620 vs. NCBI nr
Match: XP_008457217.1 (PREDICTED: chaperone protein dnaJ 20, chloroplastic-like [Cucumis melo] >KAA0033347.1 chaperone protein dnaJ 20 [Cucumis melo var. makuwa] >TYK21560.1 chaperone protein dnaJ 20 [Cucumis melo var. makuwa]) HSP 1 Score: 127.5 bits (319), Expect = 5.0e-26 Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
BLAST of CcUC06G117620 vs. ExPASy Swiss-Prot
Match: Q9SDN0 (Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ATJ20 PE=1 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 3.9e-13 Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of CcUC06G117620 vs. ExPASy TrEMBL
Match: A0A6J1KVG4 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111499073 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 1.1e-26 Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0
BLAST of CcUC06G117620 vs. ExPASy TrEMBL
Match: A0A6J1H3S2 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460232 PE=4 SV=1) HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26 Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
BLAST of CcUC06G117620 vs. ExPASy TrEMBL
Match: A0A5A7SVL1 (Chaperone protein dnaJ 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00560 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26 Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
BLAST of CcUC06G117620 vs. ExPASy TrEMBL
Match: A0A1S3C500 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103496947 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26 Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
BLAST of CcUC06G117620 vs. ExPASy TrEMBL
Match: A0A6J1HHM6 (chaperone protein dnaJ 20, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464407 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.6e-25 Identity = 62/76 (81.58%), Postives = 70/76 (92.11%), Query Frame = 0
BLAST of CcUC06G117620 vs. TAIR 10
Match: AT4G13830.2 (DNAJ-like 20 ) HSP 1 Score: 75.1 bits (183), Expect = 2.8e-14 Identity = 40/71 (56.34%), Postives = 52/71 (73.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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