CcUC06G116190 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G116190
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Acidic endochitinase-like
Location	CicolChr06: 7786524 .. 7787515 (+)
RNA-Seq Expression	CcUC06G116190
Synteny	CcUC06G116190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTTATTACTTTTACTCTGTTTCTCTCTGATCACCGTCTCCACCATCCGTGGCCTGCAGATCGGAGTTTACTGGGGACAGTGTCGGAGTGAAGGCAGCCTTATTGATACTTGCGCCACCGGCAATTACCACATCGTCAACATAGCCTTTCTCAATTCATTTCATACAGCCCGAAATGGACCGCTTAATTTAGTTGGCCACTGCGATCCAACCACCGGCGACTGTACTAAATTGAGCCAAGAAATTAAGTCATGTCAAGCCCTCGGCATCAAGGTTTCTCTCTCCATTGGCGGCGGTGCTGGTAGCTATACTCTGAATTCTACCCACAATGGCGATGCCACCAACGACGCCTTATACTTATGGAACAATTTCCTCGGCGGAGAATCAAGTTCCCGTCCTTTAGGCGACGCCGTATTGGACGGCATTGACTTCGTGGCCGCATGGGGGATCCATCATCAAAGCATAGAGATAAGCTTGCCAAAGCGTTGATGAAATACAAGGAACAGAGTAAAAGTAAATTTTACTTATCTGCTGCTCCAGAATGTCCCTTCCCTGATGCGAATCTACAACCTGCTCTCAATACAGGAGTCTTTGATTGTGTTTGGGTCATGTTTTACAACAACCCCTCTTGCGATTACTCGCACGGCAGTCTTGACAATTTGATGGTTAGTTGGAATTAGTGGACACAAATTAATGCAGGCCAAGTGTTTCTGGATTTGCCAGCAGCTCCGGAAGTGGCAACTTCGGGATATATTCCTCCTGATTTGATAAGAAATCGAGTGTTTCCGGAGCTTAAACGCAATTCAAAATTCGGGGGAGTGGTTTTGTGGTCTAGGGAATATGATAAAGGATATAGTTCAATCATCAACCAAAAAGTTTGTGGATCGGCCTGGAGTGATTCGGCGAGTGATATGGCGATGTTCCCCATGGGCAGTAAGTCCGGCGGTGGACAAGGGTTCAGAACTTGTAGAGGAACTTGTGTGCTGTGA

mRNA sequence

ATGGCCTTATTACTTTTACTCTGTTTCTCTCTGATCACCGTCTCCACCATCCGTGGCCTGCAGATCGGAGTTTACTGGGGACAGTGTCGGAGTGAAGGCAGCCTTATTGATACTTGCGCCACCGGCAATTACCACATCGTCAACATAGCCTTTCTCAATTCATTTCATACAGCCCGAAATGGACCGCTTAATTTAGTTGGCCACTGCGATCCAACCACCGGCGACTGTACTAAATTGAGCCAAGAAATTAAGTCATGTCAAGCCCTCGGCATCAAGGTTTCTCTCTCCATTGGCGGCGGTGCTGGTAGCTATACTCTGAATTCTACCCACAATGGCGATGCCACCAACGACGCCTTATACTTATGGAACAATTTCCTCGGCGGAGAATCAAGTTCCCGTCCTTTAGGCGACGCCGTATTGGACGGCATTGACTTCGTGGCCGCATGGGGGATCCATCATCAAAGCATAGAGATAAGCTTGCCAAAGCGCCAAGTGTTTCTGGATTTGCCAGCAGCTCCGGAAGTGGCAACTTCGGGATATATTCCTCCTGATTTGATAAGAAATCGAGTGTTTCCGGAGCTTAAACGCAATTCAAAATTCGGGGGAGTGGTTTTGTGGTCTAGGGAATATGATAAAGGATATAGTTCAATCATCAACCAAAAAGTTTGTGGATCGGCCTGGAGTGATTCGGCGAGTGATATGGCGATGTTCCCCATGGGCAGTAAGTCCGGCGGTGGACAAGGGTTCAGAACTTGTAGAGGAACTTGTGTGCTGTGA

Coding sequence (CDS)

ATGGCCTTATTACTTTTACTCTGTTTCTCTCTGATCACCGTCTCCACCATCCGTGGCCTGCAGATCGGAGTTTACTGGGGACAGTGTCGGAGTGAAGGCAGCCTTATTGATACTTGCGCCACCGGCAATTACCACATCGTCAACATAGCCTTTCTCAATTCATTTCATACAGCCCGAAATGGACCGCTTAATTTAGTTGGCCACTGCGATCCAACCACCGGCGACTGTACTAAATTGAGCCAAGAAATTAAGTCATGTCAAGCCCTCGGCATCAAGGTTTCTCTCTCCATTGGCGGCGGTGCTGGTAGCTATACTCTGAATTCTACCCACAATGGCGATGCCACCAACGACGCCTTATACTTATGGAACAATTTCCTCGGCGGAGAATCAAGTTCCCGTCCTTTAGGCGACGCCGTATTGGACGGCATTGACTTCGTGGCCGCATGGGGGATCCATCATCAAAGCATAGAGATAAGCTTGCCAAAGCGCCAAGTGTTTCTGGATTTGCCAGCAGCTCCGGAAGTGGCAACTTCGGGATATATTCCTCCTGATTTGATAAGAAATCGAGTGTTTCCGGAGCTTAAACGCAATTCAAAATTCGGGGGAGTGGTTTTGTGGTCTAGGGAATATGATAAAGGATATAGTTCAATCATCAACCAAAAAGTTTGTGGATCGGCCTGGAGTGATTCGGCGAGTGATATGGCGATGTTCCCCATGGGCAGTAAGTCCGGCGGTGGACAAGGGTTCAGAACTTGTAGAGGAACTTGTGTGCTGTGA

Protein sequence

MALLLLLCFSLITVSTIRGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYLWNNFLGGESSSRPLGDAVLDGIDFVAAWGIHHQSIEISLPKRQVFLDLPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGSAWSDSASDMAMFPMGSKSGGGQGFRTCRGTCVL

Homology

[Close]

BLAST of CcUC06G116190 vs. NCBI nr
Match: XP_038875419.1 (acidic endochitinase-like [Benincasa hispida])

HSP 1 Score: 392.5 bits (1007), Expect = 2.8e-105
Identity = 213/332 (64.16%), Postives = 228/332 (68.67%), Query Frame = 0


Query: 1   MALLLLLCFSLITVSTI---RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHT 60
           MA+L+LLCFSLI VSTI    GLQIGVYWGQ RSEGSLID CATGNY IVNIA LNSF T
Sbjct: 1   MAILVLLCFSLIAVSTISSCHGLQIGVYWGQGRSEGSLIDACATGNYQIVNIAHLNSFGT 60

Query: 61  ARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATND 120
            +NGPLNLVGHCDPTTGDCTKLS++IKSCQALGIK+ LSIGGGAGSYTLN T + DAT+D
Sbjct: 61  GQNGPLNLVGHCDPTTGDCTKLSKDIKSCQALGIKIFLSIGGGAGSYTLNFT-DDDATDD 120

Query: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAAW---GIHHQSIEISLPK------------ 180
           ALYLWNNFLGGESSSRPLGDAVLDGIDFV AW     H   +  +L K            
Sbjct: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVVAWDPSSKHRDKLAKALMKYKEQSKNKFYLS 180

Query: 181 --------------------------------------------------------RQVF 240
                                                                    QVF
Sbjct: 181 AAPECPFPDAGLQPALNTGVFDYVWVQFYNNPPCDYSHGSLDNLLRSWKKWTEINAGQVF 240

Query: 241 LDLPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGSA 259
           +DLPA  +VA SGYIPPD++RNRV PELKRNSKFGGVVLWSREYD GYSSIINQKVCGSA
Sbjct: 241 VDLPADSKVAFSGYIPPDVLRNRVLPELKRNSKFGGVVLWSREYDNGYSSIINQKVCGSA 300

[Close]

BLAST of CcUC06G116190 vs. NCBI nr
Match: XP_004150406.1 (acidic endochitinase [Cucumis sativus] >KGN61632.1 hypothetical protein Csa_006148 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 5.7e-98
Identity = 199/332 (59.94%), Postives = 220/332 (66.27%), Query Frame = 0


Query: 1   MALLLLLCFSLITVSTI---RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHT 60
           MALL LLCF L  +STI    GLQIGVYWGQ ++E +LIDTCATGNY IVNIA+L+SFHT
Sbjct: 1   MALLHLLCFFLFILSTITSCHGLQIGVYWGQGQNETTLIDTCATGNYQIVNIAYLSSFHT 60

Query: 61  ARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATND 120
             NG LNL GHCD TTG CT LS EIKSCQALGIKV LSIGGGAGSYTLNST++ DATND
Sbjct: 61  TENGSLNLYGHCDSTTGGCTILSTEIKSCQALGIKVFLSIGGGAGSYTLNSTNDDDATND 120

Query: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAAW---GIHHQSIEISLPK------------ 180
           ALYLWNNFLGGESSSRPLGDAVLDGIDFVA W     H   +  +L K            
Sbjct: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAGWDPSSKHRDKLARALMKYKEQSKGKIYLS 180

Query: 181 --------------------------------------------------------RQVF 240
                                                                    +VF
Sbjct: 181 AAPECPFPDANLQPAINTGVFDYVWVLFFNNPSCDYSDGSLDNLLASWSKWTKINAGEVF 240

Query: 241 LDLPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGSA 259
           + LPAAPEVA SGYIPPD++RNRV PELKRNSKFGGV+LWSREYD+GYSS I+Q VCGSA
Sbjct: 241 VFLPAAPEVAHSGYIPPDVVRNRVLPELKRNSKFGGVILWSREYDRGYSSSISQIVCGSA 300

[Close]

BLAST of CcUC06G116190 vs. NCBI nr
Match: KAA0057509.1 (acidic endochitinase-like [Cucumis melo var. makuwa] >TYK08192.1 acidic endochitinase-like [Cucumis melo var. makuwa])

HSP 1 Score: 365.5 bits (937), Expect = 3.7e-97
Identity = 197/332 (59.34%), Postives = 220/332 (66.27%), Query Frame = 0


Query: 1   MALLLLLCFSLITVSTI---RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHT 60
           MALL LLCFSL  VS I     LQIGVYWGQ ++E +L DTCATGNY IVNIA+L+SFHT
Sbjct: 1   MALLRLLCFSLFIVSAITSCHALQIGVYWGQGKNETTLFDTCATGNYQIVNIAYLSSFHT 60

Query: 61  ARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATND 120
             NG LNL GHCDPTTGDCTKLS+EIKSCQALGIKV LSIGGGAGSYTLN T++ DATND
Sbjct: 61  RGNGSLNLPGHCDPTTGDCTKLSKEIKSCQALGIKVFLSIGGGAGSYTLNFTNDDDATND 120

Query: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAAW---GIHHQSIEISLPK------------ 180
           ALYLWNNFLGG+SSSRPLG+AVLDGIDFVAAW     H   +  +L K            
Sbjct: 121 ALYLWNNFLGGKSSSRPLGEAVLDGIDFVAAWDQSAKHRDMLARALMKYKEQSRSKIYLS 180

Query: 181 --------------------------------------------------------RQVF 240
                                                                    +VF
Sbjct: 181 AAPECPFPDADLQPAINTGVFDYVWVQFFNNPPCDYSHGSLDNLLASWTKWTEINAGEVF 240

Query: 241 LDLPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGSA 259
             LPAAP+VA SGYIPPD +R+ V PELKRNSKFGGV+LWSREYD+GYSS I+Q+VCGSA
Sbjct: 241 ALLPAAPQVAFSGYIPPDAVRSLVLPELKRNSKFGGVILWSREYDRGYSSSISQQVCGSA 300

[Close]

BLAST of CcUC06G116190 vs. NCBI nr
Match: XP_008465189.1 (PREDICTED: acidic endochitinase-like [Cucumis melo])

HSP 1 Score: 337.0 bits (863), Expect = 1.4e-88
Identity = 183/314 (58.28%), Postives = 205/314 (65.29%), Query Frame = 0


Query: 1   MALLLLLCFSLITVSTI---RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHT 60
           MALL LLCFSL  VS I     LQIGVYWGQ ++E +L DTCATGNY IVNIA+L+SFHT
Sbjct: 1   MALLRLLCFSLFIVSAITSCHALQIGVYWGQGKNETTLFDTCATGNYQIVNIAYLSSFHT 60

Query: 61  ARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATND 120
             NG LNL GHCDPTTGDCTKLS+EIKSCQALGIKV LSIGGGAGSYTLN T++ DATND
Sbjct: 61  RGNGSLNLPGHCDPTTGDCTKLSKEIKSCQALGIKVFLSIGGGAGSYTLNFTNDDDATND 120

Query: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAAW---GIHHQSIEISLPK------------ 180
           ALYLWNNFLGG+SSSRPLG+AVLDGIDFVAAW     H   +  +L K            
Sbjct: 121 ALYLWNNFLGGKSSSRPLGEAVLDGIDFVAAWDQSAKHRDMLARALMKYKEQSRSKIYLS 180

Query: 181 --------------------------------------------------------RQVF 240
                                                                    +VF
Sbjct: 181 AAPECPFPDADLQPAINTGVFDYVWVQFFNNPPCDYSHGSLDNLLASWTKWTEINAGEVF 240

[Close]

BLAST of CcUC06G116190 vs. NCBI nr
Match: QEE82232.1 (acidic endochitinase-like protein [Siraitia grosvenorii])

HSP 1 Score: 310.1 bits (793), Expect = 1.8e-80
Identity = 174/332 (52.41%), Postives = 204/332 (61.45%), Query Frame = 0


Query: 4   LLLLCFSLITVS--TIRGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNG 63
           L LLC SL  VS  + R L+IGVYWGQ  SEGSLID CATGNY +VNIAFLNSF   R  
Sbjct: 9   LALLCLSLAAVSSRSRRALEIGVYWGQGGSEGSLIDACATGNYQVVNIAFLNSFGGGRTP 68

Query: 64  PLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYL 123
            L L GHCDPTTG CTKLS+EI+SCQALGIKV LSIGGGAGSYTLNST   DA + A+YL
Sbjct: 69  LLGLAGHCDPTTGGCTKLSKEIRSCQALGIKVLLSIGGGAGSYTLNST--DDAMSVAVYL 128

Query: 124 WNNFLGGESSSRPLGDAVLDGIDFVAAWGI---HHQSIEISLPK---------------- 183
           WNNFL G+SSSRPLGDAVLDGID   AW +   H  ++  +L K                
Sbjct: 129 WNNFLDGQSSSRPLGDAVLDGIDLAVAWDLSSKHWDTLAKALGKYRDQGNNKIYLSAAPQ 188

Query: 184 ------------------------------------------------------RQVFLD 243
                                                                  +VF+ 
Sbjct: 189 CPFPDSSLQPALSTGLFDYVWVQFFNNPPCEYSGGGGSRETLLASWNNWTTINASKVFVG 248

Query: 244 LPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGS--A 259
           LPA PEVA +GYIPPD++R RV PEL+R+SKFGGV+LWSR +D+GYSS IN +VCGS   
Sbjct: 249 LPAVPEVAVTGYIPPDVLRTRVLPELERSSKFGGVMLWSRAFDRGYSSAINPEVCGSVET 308

[Close]

BLAST of CcUC06G116190 vs. ExPASy Swiss-Prot
Match: P23472 (Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 6.4e-52
Identity = 124/293 (42.32%), Postives = 157/293 (53.58%), Query Frame = 0


Query: 3   LLLLLCFSLITVST-IRGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNG 62
           LLLLL  SLI  S+ + G  I +YWGQ  +EG+L  TC+T  Y  VNIAFLN F   +  
Sbjct: 9   LLLLLAISLIMSSSHVDGGGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTP 68

Query: 63  PLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYL 122
            +NL GHC+P  G CT +S  I+SCQ  GIKV LS+GGG GSYTL S    DA N A YL
Sbjct: 69  QINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLAS--QADAKNVADYL 128

Query: 123 WNNFLGGESSSRPLGDAVLDGIDF----------------VAAWGIHHQSIEI------- 182
           WNNFLGG+SSSRPLGDAVLDGIDF                ++A+    + + +       
Sbjct: 129 WNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCP 188

Query: 183 -----------------------------------------------SLPKRQVFLDLPA 223
                                                          S+   ++FL LPA
Sbjct: 189 FPDRYLGTALNTGLFDYVWVQFYNNPPCQYSSGNINNIINSWNRWTTSINAGKIFLGLPA 248

[Close]

BLAST of CcUC06G116190 vs. ExPASy Swiss-Prot
Match: P29060 (Acidic endochitinase OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.0e-49
Identity = 113/269 (42.01%), Postives = 140/269 (52.04%), Query Frame = 0


Query: 22  IGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNGPLNLVGHCDPTTGDCTKLSQ 81
           I +YWGQ  +EGSL DTCAT NY IVNIAFL  F   +N  LNL GHCDP  G CT LS 
Sbjct: 25  IVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACTGLSN 84

Query: 82  EIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYLWNNFLGGESSSRPLGDAVLD 141
           +I++CQ  GIKV LS+GGGAGSY L+S    DA N A YLWNN+LGG+S++RPLGDAVLD
Sbjct: 85  DIRACQNQGIKVMLSLGGGAGSYFLSSA--DDARNVANYLWNNYLGGQSNTRPLGDAVLD 144

Query: 142 GIDFVAAWGIHHQSIEI------------------------------------------- 201
           GIDF    G      E+                                           
Sbjct: 145 GIDFDIEGGTTQHWDELAKTLSQFSQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQ 204

Query: 202 -------------------------SLPKRQVFLDLPAAPEVATSGYIPPDLIRNRVFPE 223
                                    ++   ++FL LPAA   A SG+IP D++ ++V P 
Sbjct: 205 FYNNPPCQYSGGSADNLKNYWNQWNAIQAGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPL 264

[Close]

BLAST of CcUC06G116190 vs. ExPASy Swiss-Prot
Match: P36908 (Acidic endochitinase OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.3e-48
Identity = 120/287 (41.81%), Postives = 150/287 (52.26%), Query Frame = 0


Query: 5   LLLCFSLITVSTIRGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNGPLN 64
           LLL   LI  S   G  I VYWGQ  +EGSL D C T NY  VNIAFL++F   +N  +N
Sbjct: 11  LLLISLLIKSSNAAG--IAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQIN 70

Query: 65  LVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYLWNN 124
           L GHCDP+T  CTK S EI++CQA GIKV LS+GGGAGSY+LNS    +AT  A YLWNN
Sbjct: 71  LAGHCDPSTNGCTKFSPEIQACQAKGIKVLLSLGGGAGSYSLNSAE--EATTLANYLWNN 130

Query: 125 FLGGESSSRPLGDAVLDGIDF-VAAWGIHHQSIEISL----------------------- 184
           FLGG S+SRPLGDAVLDGIDF + + G H+  +  +L                       
Sbjct: 131 FLGGTSTSRPLGDAVLDGIDFDIESGGQHYDELAKALNGFSQQKVYLSAAPQCPYPDAHL 190

Query: 185 ------------------------------------------PKRQVFLDLPAAPEVATS 223
                                                       +QVFL +PA+   A S
Sbjct: 191 DSAIQTGLFDYVWVQFYNNPQCQYSNGNINNLVNAWNQWTSSQAKQVFLGVPASDAAAPS 250

[Close]

BLAST of CcUC06G116190 vs. ExPASy Swiss-Prot
Match: P29061 (Basic endochitinase OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 7.3e-48
Identity = 115/289 (39.79%), Postives = 155/289 (53.63%), Query Frame = 0


Query: 3   LLLLLCFSLITVSTIRGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNGP 62
           L +L  F L+  S ++   I VYWGQ   EG LIDTC +G Y+IVNIAFL+SF   +   
Sbjct: 8   LFILPIFLLLLTSKVKAGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPK 67

Query: 63  LNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYLW 122
           LNL GHC+P++G C +L++ I+ CQ++GIK+ LSIGGG  +YTL+S    DA   A YLW
Sbjct: 68  LNLAGHCEPSSGGCQQLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSV--DDARQVADYLW 127

Query: 123 NNFLGGESSSRPLGDAVLDGIDFVAAWGIHH-------------QSIEI----------- 182
           NNFLGG+SS RPLGDAVLDGIDF    G  H             Q  ++           
Sbjct: 128 NNFLGGQSSFRPLGDAVLDGIDFDIELGQPHYIALARRLSEHGQQGKKLYLTAAPQCPFP 187

Query: 183 -------------------------------------------SLPKRQVFLDLPAAPEV 223
                                                      S+P +++++ LPAA   
Sbjct: 188 DKLLNGALQTGLFDYVWVQFYNNPECEFMSNSENFKRRWNQWTSIPAKKLYIGLPAAKTA 247

[Close]

BLAST of CcUC06G116190 vs. ExPASy Swiss-Prot
Match: G1UH28 (Acidic endochitinase Pun g 14, amyloplastic OS=Punica granatum OX=22663 GN=PSC PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 9.5e-48
Identity = 115/291 (39.52%), Postives = 149/291 (51.20%), Query Frame = 0


Query: 5   LLLCFSLITVS-TIRGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNGPL 64
           LLL  S++ V+  I    I +YWGQ   EG+L  TC TG Y  V ++F+ +F   R   +
Sbjct: 11  LLLSLSILLVARAISAGDIAIYWGQNGGEGTLASTCDTGRYAYVIVSFVTTFGNFRAPVV 70

Query: 65  NLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYLWN 124
           NL GHCDP  G CT LS EI+SCQ   IKV +SIGGGAG Y+L S    DA N A YLWN
Sbjct: 71  NLAGHCDPAAGTCTGLSDEIRSCQGKDIKVLMSIGGGAGDYSLVS--EADADNFADYLWN 130

Query: 125 NFLGGESSSRPLGDAVLDGIDFVAAWG--IHHQSIEISLPKR------------------ 184
           NFLGG+SSSRPLGDAVLDGIDF    G    + ++  +L  R                  
Sbjct: 131 NFLGGQSSSRPLGDAVLDGIDFDIELGTTTFYDTLARALSSRSTQAAKVYLTAAPQCPHP 190

Query: 185 ----------------------------------------------------QVFLDLPA 223
                                                               ++FL LPA
Sbjct: 191 DSHLDAALNTGLFDNVWIQFYNNPLAQCQYSSGNTNDILSSWNTWTSSTTAGKIFLGLPA 250

[Close]

BLAST of CcUC06G116190 vs. ExPASy TrEMBL
Match: A0A0A0LLK9 (Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G193360 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 2.7e-98
Identity = 199/332 (59.94%), Postives = 220/332 (66.27%), Query Frame = 0


Query: 1   MALLLLLCFSLITVSTI---RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHT 60
           MALL LLCF L  +STI    GLQIGVYWGQ ++E +LIDTCATGNY IVNIA+L+SFHT
Sbjct: 1   MALLHLLCFFLFILSTITSCHGLQIGVYWGQGQNETTLIDTCATGNYQIVNIAYLSSFHT 60

Query: 61  ARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATND 120
             NG LNL GHCD TTG CT LS EIKSCQALGIKV LSIGGGAGSYTLNST++ DATND
Sbjct: 61  TENGSLNLYGHCDSTTGGCTILSTEIKSCQALGIKVFLSIGGGAGSYTLNSTNDDDATND 120

Query: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAAW---GIHHQSIEISLPK------------ 180
           ALYLWNNFLGGESSSRPLGDAVLDGIDFVA W     H   +  +L K            
Sbjct: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAGWDPSSKHRDKLARALMKYKEQSKGKIYLS 180

Query: 181 --------------------------------------------------------RQVF 240
                                                                    +VF
Sbjct: 181 AAPECPFPDANLQPAINTGVFDYVWVLFFNNPSCDYSDGSLDNLLASWSKWTKINAGEVF 240

Query: 241 LDLPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGSA 259
           + LPAAPEVA SGYIPPD++RNRV PELKRNSKFGGV+LWSREYD+GYSS I+Q VCGSA
Sbjct: 241 VFLPAAPEVAHSGYIPPDVVRNRVLPELKRNSKFGGVILWSREYDRGYSSSISQIVCGSA 300

[Close]

BLAST of CcUC06G116190 vs. ExPASy TrEMBL
Match: A0A5A7UVE0 (Acidic endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1503G00070 PE=4 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.8e-97
Identity = 197/332 (59.34%), Postives = 220/332 (66.27%), Query Frame = 0


Query: 1   MALLLLLCFSLITVSTI---RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHT 60
           MALL LLCFSL  VS I     LQIGVYWGQ ++E +L DTCATGNY IVNIA+L+SFHT
Sbjct: 1   MALLRLLCFSLFIVSAITSCHALQIGVYWGQGKNETTLFDTCATGNYQIVNIAYLSSFHT 60

Query: 61  ARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATND 120
             NG LNL GHCDPTTGDCTKLS+EIKSCQALGIKV LSIGGGAGSYTLN T++ DATND
Sbjct: 61  RGNGSLNLPGHCDPTTGDCTKLSKEIKSCQALGIKVFLSIGGGAGSYTLNFTNDDDATND 120

Query: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAAW---GIHHQSIEISLPK------------ 180
           ALYLWNNFLGG+SSSRPLG+AVLDGIDFVAAW     H   +  +L K            
Sbjct: 121 ALYLWNNFLGGKSSSRPLGEAVLDGIDFVAAWDQSAKHRDMLARALMKYKEQSRSKIYLS 180

Query: 181 --------------------------------------------------------RQVF 240
                                                                    +VF
Sbjct: 181 AAPECPFPDADLQPAINTGVFDYVWVQFFNNPPCDYSHGSLDNLLASWTKWTEINAGEVF 240

Query: 241 LDLPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGSA 259
             LPAAP+VA SGYIPPD +R+ V PELKRNSKFGGV+LWSREYD+GYSS I+Q+VCGSA
Sbjct: 241 ALLPAAPQVAFSGYIPPDAVRSLVLPELKRNSKFGGVILWSREYDRGYSSSISQQVCGSA 300

[Close]

BLAST of CcUC06G116190 vs. ExPASy TrEMBL
Match: A0A1S3CNC0 (acidic endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103502852 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 6.8e-89
Identity = 183/314 (58.28%), Postives = 205/314 (65.29%), Query Frame = 0


Query: 1   MALLLLLCFSLITVSTI---RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHT 60
           MALL LLCFSL  VS I     LQIGVYWGQ ++E +L DTCATGNY IVNIA+L+SFHT
Sbjct: 1   MALLRLLCFSLFIVSAITSCHALQIGVYWGQGKNETTLFDTCATGNYQIVNIAYLSSFHT 60

Query: 61  ARNGPLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATND 120
             NG LNL GHCDPTTGDCTKLS+EIKSCQALGIKV LSIGGGAGSYTLN T++ DATND
Sbjct: 61  RGNGSLNLPGHCDPTTGDCTKLSKEIKSCQALGIKVFLSIGGGAGSYTLNFTNDDDATND 120

Query: 121 ALYLWNNFLGGESSSRPLGDAVLDGIDFVAAW---GIHHQSIEISLPK------------ 180
           ALYLWNNFLGG+SSSRPLG+AVLDGIDFVAAW     H   +  +L K            
Sbjct: 121 ALYLWNNFLGGKSSSRPLGEAVLDGIDFVAAWDQSAKHRDMLARALMKYKEQSRSKIYLS 180

Query: 181 --------------------------------------------------------RQVF 240
                                                                    +VF
Sbjct: 181 AAPECPFPDADLQPAINTGVFDYVWVQFFNNPPCDYSHGSLDNLLASWTKWTEINAGEVF 240

[Close]

BLAST of CcUC06G116190 vs. ExPASy TrEMBL
Match: A0A5B9G8C9 (Acidic endochitinase-like protein OS=Siraitia grosvenorii OX=190515 GN=Cht13 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 8.9e-81
Identity = 174/332 (52.41%), Postives = 204/332 (61.45%), Query Frame = 0


Query: 4   LLLLCFSLITVS--TIRGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNG 63
           L LLC SL  VS  + R L+IGVYWGQ  SEGSLID CATGNY +VNIAFLNSF   R  
Sbjct: 9   LALLCLSLAAVSSRSRRALEIGVYWGQGGSEGSLIDACATGNYQVVNIAFLNSFGGGRTP 68

Query: 64  PLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYL 123
            L L GHCDPTTG CTKLS+EI+SCQALGIKV LSIGGGAGSYTLNST   DA + A+YL
Sbjct: 69  LLGLAGHCDPTTGGCTKLSKEIRSCQALGIKVLLSIGGGAGSYTLNST--DDAMSVAVYL 128

Query: 124 WNNFLGGESSSRPLGDAVLDGIDFVAAWGI---HHQSIEISLPK---------------- 183
           WNNFL G+SSSRPLGDAVLDGID   AW +   H  ++  +L K                
Sbjct: 129 WNNFLDGQSSSRPLGDAVLDGIDLAVAWDLSSKHWDTLAKALGKYRDQGNNKIYLSAAPQ 188

Query: 184 ------------------------------------------------------RQVFLD 243
                                                                  +VF+ 
Sbjct: 189 CPFPDSSLQPALSTGLFDYVWVQFFNNPPCEYSGGGGSRETLLASWNNWTTINASKVFVG 248

Query: 244 LPAAPEVATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGS--A 259
           LPA PEVA +GYIPPD++R RV PEL+R+SKFGGV+LWSR +D+GYSS IN +VCGS   
Sbjct: 249 LPAVPEVAVTGYIPPDVLRTRVLPELERSSKFGGVMLWSRAFDRGYSSAINPEVCGSVET 308

[Close]

BLAST of CcUC06G116190 vs. ExPASy TrEMBL
Match: A0A516SN70 (Acidic endochitinase OS=Siraitia grosvenorii OX=190515 GN=Cht12 PE=2 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 3.7e-79
Identity = 168/326 (51.53%), Postives = 202/326 (61.96%), Query Frame = 0


Query: 4   LLLLCFSLITVSTI--RGLQIGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNG 63
           L LLC SLI VS++  R L++GVYWGQ  +EGSL+D CATGNY IVNIAFLNSF + R  
Sbjct: 19  LALLCLSLIAVSSVSRRTLEVGVYWGQSGNEGSLLDACATGNYRIVNIAFLNSFGSGRTP 78

Query: 64  PLNLVGHCDPTTGDCTKLSQEIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYL 123
            +NL GHC+P+TG C KL +EI+SCQALG+KV LSIGGGAG YTLNST   DA + A+YL
Sbjct: 79  EINLAGHCNPSTGGCAKLGEEIRSCQALGVKVLLSIGGGAGRYTLNST--DDAMSVAVYL 138

Query: 124 WNNFLGGESSSRPLGDAVLDGIDFVAAWGI--HHQSIEISLPKRQ--------------- 183
           WNNFLGGESS RPLGDAVLDG+DFV   G   H  ++   L K                 
Sbjct: 139 WNNFLGGESSFRPLGDAVLDGVDFVIESGSSEHWDTLAKGLEKYSELGKKIYLSAAPQCP 198

Query: 184 --------------------------------------------------VFLDLPAAPE 243
                                                             VF+ LPAAPE
Sbjct: 199 FPDPLQPALNTGLFDYVWVQFYNNPSCDYSGGHETFLAGWNIWKDINASIVFVGLPAAPE 258

Query: 244 VATSGYIPPDLIRNRVFPELKRNSKFGGVVLWSREYDKGYSSIINQKVCGS--AWSDSAS 259
           VA +GYI PD+ R RV PEL+R+SKFGGV+LWSR +D+GYSS IN +VCGS    S SA+
Sbjct: 259 VAVTGYISPDVFRTRVLPELERSSKFGGVMLWSRAFDRGYSSAINPEVCGSVETRSASAN 318

[Close]

BLAST of CcUC06G116190 vs. TAIR 10
Match: AT5G24090.1 (chitinase A )

HSP 1 Score: 188.0 bits (476), Expect = 9.8e-48
Identity = 108/269 (40.15%), Postives = 138/269 (51.30%), Query Frame = 0


Query: 22  IGVYWGQCRSEGSLIDTCATGNYHIVNIAFLNSFHTARNGPLNLVGHCDPTTGDCTKLSQ 81
           I +YWGQ  +EG+L  TCATG Y  VN+AFL  F   +   LNL GHC+P    CT    
Sbjct: 32  IAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGS 91

Query: 82  EIKSCQALGIKVSLSIGGGAGSYTLNSTHNGDATNDALYLWNNFLGGESSSRPLGDAVLD 141
           ++K CQ+ GIKV LS+GGG G+Y++ S    DA   A YLWNNFLGG+SSSRPLGDAVLD
Sbjct: 92  QVKDCQSRGIKVMLSLGGGIGNYSIGSRE--DAKVIADYLWNNFLGGKSSSRPLGDAVLD 151

Query: 142 GIDFVAAWG--------------IHHQSIEI----------------------------- 201
           GIDF    G                H+  +I                             
Sbjct: 152 GIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWI 211

Query: 202 ---------------------------SLPKRQVFLDLPAAPEVATSGYIPPDLIRNRVF 219
                                      S+  ++ FL LPAAPE A SGYIPPD++ +++ 
Sbjct: 212 QFYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQIL 271

The following BLAST results are available for this feature:

BLAST of CcUC06G116190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875419.1	2.8e-105	64.16	acidic endochitinase-like [Benincasa hispida]	[more]
XP_004150406.1	5.7e-98	59.94	acidic endochitinase [Cucumis sativus] >KGN61632.1 hypothetical protein Csa_0061...	[more]
KAA0057509.1	3.7e-97	59.34	acidic endochitinase-like [Cucumis melo var. makuwa] >TYK08192.1 acidic endochit...	[more]
XP_008465189.1	1.4e-88	58.28	PREDICTED: acidic endochitinase-like [Cucumis melo]	[more]
QEE82232.1	1.8e-80	52.41	acidic endochitinase-like protein [Siraitia grosvenorii]	[more]

BLAST of CcUC06G116190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23472	6.4e-52	42.32	Hevamine-A OS=Hevea brasiliensis OX=3981 PE=1 SV=2	[more]
P29060	5.0e-49	42.01	Acidic endochitinase OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P36908	3.3e-48	41.81	Acidic endochitinase OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
P29061	7.3e-48	39.79	Basic endochitinase OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
G1UH28	9.5e-48	39.52	Acidic endochitinase Pun g 14, amyloplastic OS=Punica granatum OX=22663 GN=PSC P...	[more]

BLAST of CcUC06G116190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLK9	2.7e-98	59.94	Glyco_hydro_18 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G193...	[more]
A0A5A7UVE0	1.8e-97	59.34	Acidic endochitinase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CNC0	6.8e-89	58.28	acidic endochitinase-like OS=Cucumis melo OX=3656 GN=LOC103502852 PE=4 SV=1	[more]
A0A5B9G8C9	8.9e-81	52.41	Acidic endochitinase-like protein OS=Siraitia grosvenorii OX=190515 GN=Cht13 PE=...	[more]
A0A516SN70	3.7e-79	51.53	Acidic endochitinase OS=Siraitia grosvenorii OX=190515 GN=Cht12 PE=2 SV=1	[more]

BLAST of CcUC06G116190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24090.1	9.8e-48	40.15	chitinase A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 148..222 e-value: 7.5E-11 score: 43.8
None	No IPR available	GENE3D	3.20.20.80	Glycosidases	coord: 21..147 e-value: 7.5E-38 score: 132.5
None	No IPR available	PANTHER	PTHR45708:SF22	ACIDIC ENDOCHITINASE	coord: 159..221
None	No IPR available	PANTHER	PTHR45708	ENDOCHITINASE	coord: 6..148
None	No IPR available	PANTHER	PTHR45708:SF22	ACIDIC ENDOCHITINASE	coord: 6..148
None	No IPR available	PANTHER	PTHR45708	ENDOCHITINASE	coord: 159..221
IPR001223	Glycoside hydrolase family 18, catalytic domain	PFAM	PF00704	Glyco_hydro_18	coord: 22..147 e-value: 1.3E-7 score: 31.6
IPR001223	Glycoside hydrolase family 18, catalytic domain	PROSITE	PS51910	GH18_2	coord: 20..145 score: 10.424757
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	51445	(Trans)glycosidases	coord: 22..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G116190.1	CcUC06G116190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds