CcUC06G115710 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAAGGTTCGTCCAGTATCCAACAGGCAGAATATCACTGTCCAATACACTTCAAATGGTCGCAACTCGCTCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAAGAAACTACGGCGGTTACCCCATGTTTTCAGCCGAGTTTTGGAGCTTCCATTTAGGTCCGATGCCGATGTTTCGGTTGTCGAAAACTCTAATTGCTTCCGATTCGTAGCGGAAACTGATGGAATTAGCGAGGAATTTAGGGCGCATACGGTTCAAATCCATCCTGGGGTTATCAAAGTTGTGGTTAGACAAATTGGGGATCTGGAATCGACGTTAGATGAACTGGAGATCGACATGTGGAGATTTCGACTGCCGGAGACGACTCTACCGGAGCTTGCAACCGCTGCGTTCGACGGCGGGAAACTCATCGTGACGGTTCCGAAGAGGGAGGACGACGGAGAAGGTGCGTGGGGGGATAAGAATGGGGGTTTTAGAGGAGGCCATTTAGTAGTTGTACAGTAA ATGAGGAAGGTTCGTCCAGTATCCAACAGGCAGAATATCACTGTCCAATACACTTCAAATGGTCGCAACTCGCTCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAAGAAACTACGGCGGTTACCCCATGTTTTCAGCCGAGTTTTGGAGCTTCCATTTAGGTCCGATGCCGATGTTTCGGTTGTCGAAAACTCTAATTGCTTCCGATTCGTAGCGGAAACTGATGGAATTAGCGAGGAATTTAGGGCGCATACGGTTCAAATCCATCCTGGGGTTATCAAAGTTGTGGTTAGACAAATTGGGGATCTGGAATCGACGTTAGATGAACTGGAGATCGACATGTGGAGATTTCGACTGCCGGAGACGACTCTACCGGAGCTTGCAACCGCTGCGTTCGACGGCGGGAAACTCATCGTGACGGTTCCGAAGAGGGAGGACGACGGAGAAGGTGCGTGGGGGGATAAGAATGGGGGTTTTAGAGGAGGCCATTTAGTAGTTGTACAGTAA ATGAGGAAGGTTCGTCCAGTATCCAACAGGCAGAATATCACTGTCCAATACACTTCAAATGGTCGCAACTCGCTCTCTCGTGCTCAATCGCTTCTAGGTTTAAACCCTAAGAAACTACGGCGGTTACCCCATGTTTTCAGCCGAGTTTTGGAGCTTCCATTTAGGTCCGATGCCGATGTTTCGGTTGTCGAAAACTCTAATTGCTTCCGATTCGTAGCGGAAACTGATGGAATTAGCGAGGAATTTAGGGCGCATACGGTTCAAATCCATCCTGGGGTTATCAAAGTTGTGGTTAGACAAATTGGGGATCTGGAATCGACGTTAGATGAACTGGAGATCGACATGTGGAGATTTCGACTGCCGGAGACGACTCTACCGGAGCTTGCAACCGCTGCGTTCGACGGCGGGAAACTCATCGTGACGGTTCCGAAGAGGGAGGACGACGGAGAAGGTGCGTGGGGGGATAAGAATGGGGGTTTTAGAGGAGGCCATTTAGTAGTTGTACAGTAA MRKVRPVSNRQNITVQYTSNGRNSLSRAQSLLGLNPKKLRRLPHVFSRVLELPFRSDADVSVVENSNCFRFVAETDGISEEFRAHTVQIHPGVIKVVVRQIGDLESTLDELEIDMWRFRLPETTLPELATAAFDGGKLIVTVPKREDDGEGAWGDKNGGFRGGHLVVVQ Homology
BLAST of CcUC06G115710 vs. NCBI nr
Match: XP_038906706.1 (uncharacterized protein LOC120092632 [Benincasa hispida]) HSP 1 Score: 325.5 bits (833), Expect = 2.8e-85 Identity = 160/169 (94.67%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of CcUC06G115710 vs. NCBI nr
Match: KAA0040800.1 (heat shock 22 kDa protein [Cucumis melo var. makuwa] >TYK17781.1 heat shock 22 kDa protein [Cucumis melo var. makuwa]) HSP 1 Score: 323.9 bits (829), Expect = 8.0e-85 Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of CcUC06G115710 vs. NCBI nr
Match: XP_008447155.1 (PREDICTED: uncharacterized protein LOC103489672 [Cucumis melo]) HSP 1 Score: 317.4 bits (812), Expect = 7.5e-83 Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CcUC06G115710 vs. NCBI nr
Match: XP_004139820.1 (uncharacterized protein LOC101211410 [Cucumis sativus] >KAE8646093.1 hypothetical protein Csa_015599 [Cucumis sativus]) HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82 Identity = 154/169 (91.12%), Postives = 161/169 (95.27%), Query Frame = 0
BLAST of CcUC06G115710 vs. NCBI nr
Match: XP_023006455.1 (uncharacterized protein LOC111499177 [Cucurbita maxima]) HSP 1 Score: 288.1 bits (736), Expect = 4.9e-74 Identity = 143/169 (84.62%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of CcUC06G115710 vs. ExPASy Swiss-Prot
Match: P12811 (Heat shock 22 kDa protein, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 7.2e-04 Identity = 32/100 (32.00%), Postives = 46/100 (46.00%), Query Frame = 0
BLAST of CcUC06G115710 vs. ExPASy TrEMBL
Match: A0A5D3D0L4 (Heat shock 22 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G00230 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 3.9e-85 Identity = 159/169 (94.08%), Postives = 163/169 (96.45%), Query Frame = 0
BLAST of CcUC06G115710 vs. ExPASy TrEMBL
Match: A0A1S3BGR7 (uncharacterized protein LOC103489672 OS=Cucumis melo OX=3656 GN=LOC103489672 PE=4 SV=1) HSP 1 Score: 317.4 bits (812), Expect = 3.6e-83 Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CcUC06G115710 vs. ExPASy TrEMBL
Match: A0A0A0K3G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234120 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82 Identity = 154/169 (91.12%), Postives = 161/169 (95.27%), Query Frame = 0
BLAST of CcUC06G115710 vs. ExPASy TrEMBL
Match: A0A6J1L064 (uncharacterized protein LOC111499177 OS=Cucurbita maxima OX=3661 GN=LOC111499177 PE=4 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 2.4e-74 Identity = 143/169 (84.62%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of CcUC06G115710 vs. ExPASy TrEMBL
Match: A0A6J1H6F5 (uncharacterized protein LOC111460455 OS=Cucurbita moschata OX=3662 GN=LOC111460455 PE=4 SV=1) HSP 1 Score: 286.2 bits (731), Expect = 9.0e-74 Identity = 143/169 (84.62%), Postives = 154/169 (91.12%), Query Frame = 0
BLAST of CcUC06G115710 vs. TAIR 10
Match: AT3G22530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14830.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 152.9 bits (385), Expect = 2.3e-37 Identity = 82/140 (58.57%), Postives = 99/140 (70.71%), Query Frame = 0
BLAST of CcUC06G115710 vs. TAIR 10
Match: AT4G14830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G22530.1); Has 77 Blast hits to 77 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 144.8 bits (364), Expect = 6.2e-35 Identity = 80/134 (59.70%), Postives = 97/134 (72.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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