CcUC06G115080 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G115080
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Mediator of RNA polymerase II transcription subunit 33A-like
Location	CicolChr06: 6354425 .. 6367112 (+)
RNA-Seq Expression	CcUC06G115080
Synteny	CcUC06G115080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAAAGCCACTGTCGTCAAAAACTTTCTCTTTCTTTCTCTCTAGTTTTTCCGTGTTCTTCCCGCAGCACTTTACCACCATCAATTGGCCAAACAAATCGGTTCAATCTGGCTCGAAAATGGCGGTATCTGTCCAAAATAGTCTTTGGGACAGAGTTACGGAACTAACCAAGGTGGCTCAACAAAAGGGAGTTGATCCTCTTCTTTGGGCCATTCAGCTGTCTTCGAATTTGAACTCGGCAGGAGTCGCTTTGCCGTCAGTTGAGCTTGCTAACCTGCTGGTTTCGCAAATTTGTTGGGATAATAATGAGCCTGTTTCATGGAAGTTCCTTGAGAAGGCGTTGATGTTGAGTATTGTACCCCCGATTCTCGTTCTTGCCTTGCTCACAACCAGGTCCGTTCTCGTTTGTTTTTGCTCTTTACCTCTTTCCTTTTTTTTTGTTTTTTTGTGCATGTGTTTGTATTTTGATGTATGAGTTCCTTTTTTCGAAGGCAAACTCGTGTTCTGTGGATGTTCGTTTGTTAGTTGAGCTTAAATCCTGATTGATAGGATGAATATGGAGCTTGTTTCATAGAATTTGTTGCAACTGTGAAGAAATTGTAAAGATTCTTCTTTTTCATGATGCTTGCCGTGGTATGGAGCTCGGGTTTTCATGATCGTCTGTGCGCAAGTGCTTGTTACGTTTGGTCTGAATTGCGCTTACGTGATCCCATGTGTTGTGTTCTTATTTTTATTTTTATTTTTTATTTTTTTCCCTCCCAATTGAGCTTATGAAGTTAAACTGAATCGGAATTCGCTGATCATGCATTTGTTAGTTTTTTTTGTATGTACTTTACTAAGTGATAGTAGTTAGGTTTCTGTGTTTAAGCACGGGCATGAATAGTATAGTGCATTTGCGTTCAAGAATAGTTTTTGTTTGCTGCGATTGATCCGAATAGATTCCGGCCAGGATTTGGATGAATTCCTGCTGGATATCCGATCTGTTTGATGTATCTGATACATTATGCATTTCAGTCGAGAGTGGCATTTTTCTTTTCTTTTGTGTAAATGGTTCTTCAATTTAGGGTTTAGCTGTAGAATTGCTGATTGATTTGCAAGTCATTGTGTATATTATTTGCTAATTGGATCTGATCTGAAGTTAATTTGTTTACCTTTCATTTGGCAATTTATAATCAATAGGAACCAGTGTTGATAATTGTTATTTCTTCTTTCTACAGAGTCATTTCAAGAAGACAATTCCAGCCAGTAGCATATAGACTCTATCTGGAACTCCTTCGAAGACATGCTTTTAAACTGAATTCTCATATCCATGGCCTCAAATACGAAGAGTTAGTTTTATGATTGAGAAGGATAACAAAGTTCAAGACTGTGATTCAATTTTGCTGCCGTTTTTACCTTTTATGTTGCATAATGCACTTGATCTTTCTGTGAAACTGTGGAACTTAGGGAGAGTTTTGCTTGATGGTTTCTCTCTTATTGTTTTTTTTCCTTTCTAAAACATAATTAGGTGTAAGATGCTGACATAGAAATTGTAATGGTTGTGTTTTACTACCTTTTCTGGACCTTGGCAATCCTCTTGACCATGATATGTTCTATTTTGTAATTCTCTTCCCTTTGGAAGCTATAATCCTACTTCATAGAATCATTGATTTTTTTTTTCTTTTTTCTTTTTTCTTTTTCTTTTTTATTTATTTATTTATTTATTATTATTATTATTATTATTATTATTATTTTTAATCCAACTTTTCATAATTTTCCATTATGGAGCTCTATATATGTTTAAGCTTCCTGACCATGACTTAACAAATGGTAGCAACAGTGCCTACTTTTGTACTTCACAGGACATTAGCTGCTTGACAGTCCATTGTTATCTCCATCCAATCTTTTCCCCTATTAGTTGGCATGTGCACCTAGGAGAATATAAGAAAAAAAAATGTTTCAGAATGAAAATATCAGTATATGAGATGATTTTAGATATTTGGGTTTGCTTAAATTTAATCCTAAAGATTTCTAATGATTTGTGCTCAGGTCAATGGGTTCATATATATTGTTTAATACTTCTTATATTATTGATTCTTTATGACAATTTTGCAACATATCTTTGCTCCCTTTTTTACTCTGGAAGATTAGTGAATGTGAATCATAGAATTATAAGTCTACAGATCAAGGTTTACTGAATAATATTCTCTGTTGATACCATGGCTTCAATTTTTGAGGATTAATCTATTCTATGCACCATTTGAGAGAGAATGGACCGCTTTTCGTCGCATTTTTGTTCTTAATGTCATGCATACGTCTTTAATAATAAACCTCTCTCTTTTATACAGGGTCATGGCCTCTGTTGATGCTGTTCTTCGTCTTTCTGAGACATTCAATTTGCCAGCAAATGATCCTGGGACCCTTGTGGTTGAGTTTATATTTTCAATTGTCTGGCAGTTGCTTGATGCAACACTTGTTGATGAAGGGTTATTGGAACTTATTGTGGAAGAGAAATCCAAATGGCCGACAAAACCTCAAGAAATGGAACTAGATGGTCACAATGGTTATGATGATAAATGGACTGAACAACGTGAGAGATTGCGGAATGTAAACATTGAACTGACAATTGAGATAATTGGTAAATTTCTTCAAGATACGGTTACTTCAAGGATTCTTCACTTGGCTTGCAGGAATATGTAAGGACATTCATCTATCAACTTAAAACTCTACCTTTTCTTTGTGAGTTCGAAGTAGAACGATATGAATAAACTTAATGACGAACTGTGCTATCCAACTTAACTAACCATGATTTTGCTATTTATATGATTAACTTATATTTAGTAAAAAACTACTTGTCGAAAAGATCATATCGAATTATGTCTATCGTATCTTTTCTATCATTGTTTTCTTCAACCTTTTTACAAATTTCCAGGCCTTTGCATTGGGAGGATCTTATTCAGCGACTCCAGTTGCTGGGAGAAAATTCTTCAGTATTGAGAAACTCAAAATCTCTGAACTCAGAGATTTTTCTGCAGTTCACGTCTGATACTTGGACAATCTTCTCTCAAGAATTTAAACAAAATTCACAGCAGAAGTTCCATCCAATTAGAGCATTTGGATCTCCAGCAGCTTCTGCTAGTCTGTGTCGTAGAACTCGTTATTCTGCACTTTGGCTTCCTCTCGATCTAGTTCTAGAAGATGCAATGGATGGATATCAAGTAGAAGCAACAAGTGCTATTGAAAAAATTACTAGTACAACTAACTTTTTTCCCTACTTTTCTATAATTTCTACTTATATGCACAAATCCTATCAGTTTGTACAAGAAAAGTATACATGAAAATGAACTTCATCTTTATTTCTTACAGGTTTAGTCAAAACCCTTAAGGCAATAAATGGAACTAGTTGGCATGATACCTTCTTGGGTCTCTGGATAGCAGCTCTTCGTCTTGTTCAAAGGGTTAGAACTCTGTTGGTCAATAGATTATCTATAGGTTTCTTTTTTTTTTTTTTTAAATTTTTTATTTTATTTTATTTTATTTTATTTTTTTATATGAAAGACAATTGTGATGAAATGGCACATCCATTTTTGCTGTAGTTTGCTAGAACTCATGAAGCACTCAGTACAAATACCTGTTCTCTTTGGATAGATTTCTGGTCTCTTTGGCTTAACATTCTTGTCCATAAATCAAACACACAACTCAATTATTTCGTAAAACATATCATATTTAGGGCAATCAAGTAGTTTTAACTGAATATATACATCATAAATCTTCATTTTTTTTTGTTCTTGATTGCCTTTTTGTCTATCATTATTGCAGAATACATTAATTTAATATTCTCTTTTGATATTTATATTTGTTTACTTCATCAATAAGATTTATGTAAAAGTGGTTTGACATTCTTTTTTTCCTAAATGTTGAAAAGGAAAGGGATCCCATCGAGGGGCCTGTGCCTCGCATAGACACTCGTCTATGCCTTCTATTGTGTATCACAGTCCTTGTGATTGCTGATCTGATTGCGGAGGAGGAAAGTACGATGATTGATGAAACAGAGTATGTTGCTTCCAATCACTGGAAAGAAAAAAAGGCCCCTGCAAAGTGTCGTAATGAACTAATTTCTAGCCTACAGATATTGGGGGAATATCAGAGCTTGCTGACTCCTCCTCAGGGTGTTGTCTCTGCATGCAATCAGGCGGCTGCCAAAGCAATGATGTTTATATCTGGAATCAGTGTTAGTAATGCATATTTTGAATGCATCAATATGAAAGACATGCCAATGAACTCTTGTGAGTATTATTTCTTCTTGATAAGCATCAATTATAAAATTATGAAATCCACTGGCACACGGTACCAAAAACAATATAATAAAATAGCATACTGGTGGTCCTGGATCCATACAGGGTAGATGATGTGCTCATGCGCTTTTGTAAAAGTTTCACCTCCCTCAAACTGTTTGTTGTGAATGTGTGCTTAACTCTCATATGATGAGATTAATGGGTACATCAATATGAAAGAGTTCATGTTTGATATTCTAGTATGATAGGATATAAGTTTCAGATATAATTGGTTTGCATGTCCGATTAATAGTACACAAGAAATTGCAGGGTAAGAGACTGCAAGGCAATATAAGCGCACATGACATTTATATTCTTCAGAAAGCATTGTTTATTTCCAGCCTTTATTTATTGCGAGTCACATACATTATTCGATTTTTTTGATTAAAGAATGTGTATTTGGTTCTTTAAAGGAGAAGCTAGCGGCCTGGGTCTGCTTAACATAATTTTATTTTGTTCCCTTAGCAGCTGGAAATATGCGTCATTTGATAGTTGAGGCTTGCATTGCTAGAAATCTTCTGGATACATCTGCATATTTCTGGCGTGGCTATGTGAACGGTTGCATTAGCCAAATGCCTCAAAGTATACCACCTCAGGCACCTGGTTGGTCAGCTTTCATGAAGGGGGCTCCACTTAATCATATAATGATAAATGCCTTAACTTCAACTCCTGCTTCAAGGTATACACACTCGAATGAACCTACTTTTGGCCCTTTTGGTTCTTTTCTTTTCTGTTTGGACATTGGAAGTCTAAAAAAATCACATCAAAAGACATGTAATGCCATCAGGTTTTTCATTCAATGTTTGTGGTGGTTTCCTGGTTGTGAAGGAAGTCTCCAACAAAATTAAATGATTATATAACTTATAGAATTTATTTTGGGAAGATTACCCATAGAGTACTTCTATAATCTTTATCAATTTCTCTTCAGGCTGGTATTGTGATAGAATCTGATATGGAAAGTTTTGTTCAATTGAAAGGAAGTCCTAAGGCTGTTACAAACTGCAATATACAAGAACACAAGAACAAACCTCACTCTCACTTTCGAGAGGAGTCCTAGACCTTCTTACAAACTGACTTTCCCTCCTAACAATTACTCTCAAATACTACCCTCTTTCCCTCACTAACAGTGGTCCCCCGTATCACACAATTAGACACCCAACCAACACTAACCCACAGCAGCTATACTTCCACACACATTTGCTTTTCCCTTATTACCCCTTCTACTGTATTTCAATACAATTGGTGGCCTAACATATTGATTATCCAGCAAATGGAATCTTCCTACTCCCCTTTGACCTATGGGCATAATTTTTTAAATTATTACTCAAGCGTTTTGATTGGTTTGACCTATGGGCATTAATTTCTAATTGTACTTCTATTTAATTGGTTTGTCCCAAAACAAGAAAAACAAAACACATCAAAGAACACGTATACACTCATACACCCAAAAGGATTACAAATGTGGAAAGCAAAAATACCTTCACCTGGCTTGAATGGTCAAAAGACGACCATTACAAATATTTCTAAAATGAGTGCTGATACGTGGATGTGACTGTGCAGTCATGGGCCAGTCATCTAGTTGGTACCTGCATGTTTGATTACTCGAACCATTATGGTGCTATGCTCAACACCTAAGAAGCATGGATATGGATATGAGCACGGATATGACAAGGACACGACGACACACCATGTTTGAAATATCTAAGACACAACACGACAAGGACACATTTATTAAAATATACATTTTCTAAAAAATATATTATTTTCATACCAAAATAAAATTCAAAGTAAATGGGTTGATGCATTTATATGCTTAAAAGACTACTTGATGTATTGCACACTCAAAGTTATTATTATTGTCATATATGTGTCTTTTTAGTCTACTGAACAAGCCTTCAATGCATGTCTAACACATTTGTTGCACTAATAAGTGTTTGATACGTGTCCAACAAGTGTTGGAGTATCCAAGTGTCCGACACGTGTTGGACATGGACACGCTAGCCAAACTAAAGTGTCTGTGCTTCTTAGCTCAAAAGTCAATACTGGATTGAAGTAGTAATAGATTAAGGGTAATGGTTGCATACCGCAATGGAGAGATTGTTCCCGTTATTTATGTGTTCCCCTTCGCATGTGTCAGGGGCTAGGGTTGTACAATGTGTTGGCTGAAATCATGGAAAAGTGGGATATGAACCCAGCTCGATTATCACCCAACTTGGAGGCATGAGGCAATGTCCTTTCCCACTAGTCGTCCTCACTCCTCAGCTTGGCCCTAAGGGCCAGTCGAGGGAGGTTTTTCTCTCTGCCTCATGGGCCCCTAGCCCAATTGGGATTGGGACTGCCCTGGCCCATGGGCCGGTCTTGTGGGGTGGTTTGGTCCACCCCATAACAGTGAGTGTTCCAATTGAGCCTGTAAGGCAACAAGATCCTTCACCTCTTAATTTAATCCTAGATTTCTATAAAAAATCTATGTTTGTCCCAATCCATAGCACCCACCTACACTCAGTATGATAGCATTAGTCCTCAGTAATTCAATTTGCCTGCCTCTGTGACCATGACCCAAACGTAGTAGGATCGAATGTTCGACATATGATTGTACCTAGTAATCTTATCGAGAGAATGCGTCATATGTTGATTTGATCAAATATGGATGGCTTTCAGACTAGGTCTTCTTGTTTACTTATGGCCTGTTCTTCAGTTGTTCCCTTTTTTTTTTCTTTCATGTAGTCAGGTATATCAGATGCTCTTTTTTTGTAAATAACAAAAGGTCTGAATTTTAAGCTCATGGGTTTGATGGAAGCTTAGCAGAACTGGAGAAAATATTTGAGATAGCAGTAAAAGGATCAGATGAAGAGAAGATATCTGCAGCAACAATTCTTTGTGGGGCCTCCTTGATCCGAGGGTGGAATATTCAGGTGACCATTGAAAGATCATAGGACATAAAGTTAAAAGGAATTATTTATTATTTTTCACATAGTTTTCTAAAGAAGTCACTTTGTCTCATTCCCTCTATTTTAATCAGACAGCTATATTTAATGTAATTATGATCTACTTCCATGCAGGAGCATACTGTCCATTACATTACTAGGTTACTTTCTCCTCCCGTTCCCACGGATTATTCTGGATGTGAAAGTCATCTGATAGGCTATGCTCCAATGCTGAATCTGCTTATTGTTGGAATAGCATCCATAGATTGTGTTCAGATTTTTTCTCTACATGGTTTGGTATGTTCTTCATTGCTGCCTGATATTTATATTGAGACACTATTCTGTTACTTGTTTAATTAGAAGAACCATTTACTTTGATATACTTGTTTCTGGGAAAATTGAGGTTCTTCCCGTTATTAAGGTGCATTTATCTATTTATTTTTATTTATAAGAAATGATTTTATTGATATAAACAAGTAGGAAACAGATCCAGAAAACGAGTGGTGTTACGAAAGGCCCTTCGACTAGACCATACAGAAGAAAGAAGTTGTGAGGAAAGATATTTGTTCTATGTTATCAAGAAGAAGAAAGAAAAAGAATTGACTTCCCAAATAACAGTTGTACCATAAAGTCCTCAAGAATTCTAGGGATAACTTTATCTGCTACCTTTAATCTTTCAACTCCCCTTCTCAAAGATTTCACGTTCTTAAGGAGCTTTCTGTCCCAGATAGCCTCAATAACCATCTCCTTCAAAACTAAAAGCTTGGCAGAGAATTTCTGGTAGAGATATGGTAGAAAAACCCAGACAATTTAAGAGTCCACCTTCAACACTATCTCTTGTTTATTGGGTGAAAGATTCTGTAAAGAGGTCCACTGCAAAAGCCATTCCTCAGTCTCAAATCCGTAAGTTCCTTCGTCGGATATAGCTGATGGTTGCTACCTCATCCCAACACAAAAACTCACCCAGCCACCTCTGGGATTTTCTACCCAGCATTGTGCATTATACTGATCATCTCACAAATTAATCTTCTCCCCACTCCCTGCCTTAAAAGTAGAGAAAACTAGGGATTGCGTGTACTCATAATTGTAAAAGAAGCTATTGTTCTCCATCTCCTCTTGGTATCCCATTGGGGAAAGTTAAGGATTTAGATTTAGAGATGCACCTGAAAATCCAATTAGTTCACATTTTTTCCTAAACCTCTTATATCTTATAATGCCAAGAGGAATTCACATCCACCATGTTGTGTATGCCTTTTCTAAATCTAGGCAGAAGAATTCATTCCTTTTTCTAATTTTTTTTTAAAAAATATTCATGAGTGTCTAAGCCACCTTGCTCTTGCTTAGACCTCAGTTATTTTGAGGAGACAATTGCTTGACCATGTTACATTTGTTTATCAATGATACTTGTAGAATATTGAACCTATTCTCTCTAAGCCTTTTATTATTTATGCCGTCTTCATTAGCCACTATGTCCACGGCTCACACTTTTAGGATTGAGAATTTAGGATTTGAGATGCACTTGAAGATCCAATGAATCCACACTTTTTCCTAAACCTTTATTTCTTATTCTGGCATGATATGTTGTGTGCCTCTCTAAATCTATCTTGACGACGAATCTTTCTTCTTGGCTCACTTCTGATCAGCTGCCAATTAATTGATGAAACTATCAAGGGAATCCACAATTTGCTGGTGCTTGCTAAATACTACCTGATTTTTCCTACCTTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCCAAATTTTTTCAATACCAACCTGGTCTCTTATAAGTTCCTTAGCCTGCTAAGGAACTCATACAGAGCTTGTCAATCATTTTGGAAAGAGAAGAAAGGTTCATGGATTCTGATTAGTTCAGAGGTGTGGTGTTAAAATCCCTTGGTTTTAGACAGTTGATTGAGAACAACTCCAGATTTATAGTGAGTTACTGATAATAAGGACTTGGGGCTAGATGATAACTCACTTGGAAACTTTTTCCCTGTTGTTCAATAGGAATGTTAATAGTGAAATTTGGGATACTGCTGTTTCTGTATCCCCAAGTTGGTTTTTCCTTAAAGAGTTCTATAATTGCTCTCCTTCATATAATTTGTCCAATTGGAGTATATTTTTGCGACTAATAGAGTCTGAGGTCTCACCTTCTTTTTGTTTATTTCATGTTCTCAACAAAATGGATGTCAATGGCTTATTTTAGGGGGAAAGATAGGACGATAATAAAATTTAGACTAGATGCACAAATCACTAGCCAATCACTGATTATCATTTTGGATTATTCTAAATTTGATCGAAGTTTTCATCTCAATTGAGTTGAATAGTTATTGAGTCAATTAAAGTTTTGACGTAGAGATGTCAAATCTATAAACACTATGTCAAATCTATAAACAATCTCCATCTCTCCCTCTTTTTAAATTTATATGTAGTTTTGTTTTTCTAATTTTTTTCAAAATGAGATTTCAACCTCCACCTATCAGGTTCATTATGCCTTCATTGATATCTGTTCTAGGTTCCACAGCTCGCATGTTCACTGATGCCAATCTGTGAGGTTTTTGGTTCATGTGTGCCAAACCTCAATTGGACGTTAACTACAGGGGAAGAAATCTCTGCTCATGCCGTATTTTCAAATGCGTTTACTCTTCTCTTAAAGCTTTGGAGATTTAACCATCCTCCTCTAGATCACGGAGTGGGCGATGCACCCACGGTTGGATCTCAACTTACTCCAGAATATCTACTCTTAGTGAGAAATTCCCATCTGGTATCTGGAAATGTCCACAGAGATCGCAATAAAATGAGACTTTCAGCTGTAGCAAGTTCCTCTTCCCCTCAACCAATATTTGTAGACTCATTTCCCAAATTGAAAGTCTGGTATCGGCAGCATCAAGCATGTATAGCGTCAACCCTCTCTGGTCATGTTCATGGCAACCCAGTTCATCAGACTGTTGATGGACTGCTTACCATGATGTTCCGAAGAATTAATGGGGGAAATCAACCGTTAACTTCAGTTACTTCTGGAAGTAGTAGTTCTTCTGGGCCTGGAAATGAAGATTCTTCTTTAAGACCCAGATTGCCTGCCTGGGATATAATGGAAGCTGTTCCGTTTGTGATTGATGCTGCTCTAACAGCCTGTGCTCATGGAAAGCTTTCTCCTCGTGAGTTGGCTACAGGTCAGTATAAATACTGGTTAAATAAATTTCACAATTTCTGTATCTCTTGTTCATGACCGAATTCGTAATATCTTTTATATTTCCTTTTATGTTTTTTAACTTTAAAGTTATGGTTTTCTACAGCCATGGCAGAATCTAAGCTGCTATGTGATACATTTTGTTGAGATTATCTAAGTTGCACTCGTACACATGCCCATACCCATACCCAATTTTGAAATGACCAGACTTTACTTCAAATCATTCATTTCTTTTCATGTAATCATTCCAGGACTCAAAGATCTAGCCGATTTTCTACCAGCATCTTTAGCCACAATAGTGAGCTACTTTTCTGCAGAAGTTACTCGGGGATTATGGAAACCTGTTTTTATGAATGGAACAGATTGGCCAAGCCCAGCAGAAAACCTTTCTAATGTGGAAGAGCAAATCAAGAAAATCCTAGCTGCTACTGGCGTTGATGTCCCTAGCCTAGCTGCAGGTTTGGTCATTGTAACTGTAAACTTCTAAATGAAATATTTCAAGTTTGAGTTTGATTATGCATTTCTAGATCAGTTCCAAAGCAAGCCAAAAGCCAACGACAAAACATTCGCATGGATTATCTTTGACTGTTCAAGTGATAAGTTAGGGGCTTCATATTGTTTGTAATCACCGTCTCAGTTCTATCAAGCACCTTCTTTTCATTGGCTGAAATGTATGAAAAATCAAATCGGAAAGGACAACCTAACTAGCCTTGTGCATAAATCTATCAACCAATAAAGAAATGTGTTAATGATGACTTTTCTATCTGTGATTTCTGTAGGGGGAAGCTCTCCAGCTACACTTCCTCTGCCCTTAGCTGCCTTTCTAAGCCTTACTATAACCTACAAAATTGACAGAGCATCCGAACGTTTCCTCAATTTGGCTGGCCCAGCTTTGGAGTCTCTCGCAGCTGGTTGCCCATGGCCATGCATGCCTATTGTTACTTCCTTGTGGACTCAAAAAGCCAAACGTTGGAGTGATTTCCTGGTCTTTTCAGCATCTCGTACTGTCTTCCTTCAGAACTGCGATGCCGTGGTTCAGCTGCTCAAAAGCTGCTTCACCGCCACCCTAGGCCTGACTGCCAATCCTCTCTCAAATCATGGGGGTGTTGGGGCCCTTCTTGGCCACGGATTCGGATCTCATTTCTGTGGCGGGATTTCTCCTGTTGCTCCAGGAATACTTTTTTTACGCGTCTACCGATCAATTAGAGACGTTGCACTATTGGTTGAAGAGATTCTATCTCTTCTGATGGATTCGGTGAAAGAAATAGCTTGTAATGGTGCCCGGAAAGAGAGATCAGGGAAATTAAAGACAACCAATAATGCAAAAAGATATGGACAGATTTCACTATCTTCAGCAATGACTCAAGTAAAGCTTGCAGCTTCCCTTGGAGCTTCACTAGTATGGCTATCAGGCGGTTTAGTATTGGTTCAATCTGTGATAAAAGAAACGTTGCCTTCTTGGTTCATTTCAGTTCATGGGTCTGAGCAAGAGAAATGTTCAGAGGGAATAGTTTCCATGCTTGGTGGATATGCATTAGCTTACTTTGCAGTTCTATGTGGGGCTTTTGCTTGGGGCACTGATTCTTCATCATCTGCATCGAAGAGACGTCCCAAAATCCTTGGTGTCCATATGGAGTTTCTTGCAAGTGCCCTTGATGGAAAGATATTGCTAGGATGCGATTGGGCCACTTGGCGTGCCTACGTGACTGGATTTGTTAGCCTAATGGTCGGTTGCACACCGAGCTGGGTTCTAGATGTAGATGTGGACGTATTGAAACGATTGAGTAATGGACTAAGGCAATGGAATGAAGAAGAGCTCGCTCTTGCATTGCTTGGACTTGGTGGAGTTGGTACCATTGGCGCAGCTGCTGAACTGATTATTGAAAGTGAAACGTAAGTTTGTTTAACCCATTTTTGTATTCTTTTAGGTCGGTTTCTAGAGTTAGAATAGTTTGTACTATAGTTTTGTTCTATTCTAAAGAGTCCTGTAACCATCAGCTTTAATTATTGAAGTATAGGGTTGTGAGTTAGTTACAGCGTTACTTAAAGCTAACAAATGTAAATTGGTCCATTTCCCACTACTACATTTGAAGATATATATATTTTTTTTCCATAAAGAAACTTGTGAAAAATAAGAATTAAACACCTTCTGAGGGCAGGGCTCATTCCCAATTGTAGTGAATTAATGCAATTGGATATTACAAAAGAATTGATAAAGCTGAAAATTATTGGAAAAAAATAGTCTATTAGGGG

mRNA sequence

TCCAAAAGCCACTGTCGTCAAAAACTTTCTCTTTCTTTCTCTCTAGTTTTTCCGTGTTCTTCCCGCAGCACTTTACCACCATCAATTGGCCAAACAAATCGGTTCAATCTGGCTCGAAAATGGCGGTATCTGTCCAAAATAGTCTTTGGGACAGAGTTACGGAACTAACCAAGGTGGCTCAACAAAAGGGAGTTGATCCTCTTCTTTGGGCCATTCAGCTGTCTTCGAATTTGAACTCGGCAGGAGTCGCTTTGCCGTCAGTTGAGCTTGCTAACCTGCTGGTTTCGCAAATTTGTTGGGATAATAATGAGCCTGTTTCATGGAAGTTCCTTGAGAAGGCGTTGATGTTGAGTATTGTACCCCCGATTCTCGTTCTTGCCTTGCTCACAACCAGAGTCATTTCAAGAAGACAATTCCAGCCAGTAGCATATAGACTCTATCTGGAACTCCTTCGAAGACATGCTTTTAAACTGAATTCTCATATCCATGGCCTCAAATACGAAGAGGTCATGGCCTCTGTTGATGCTGTTCTTCGTCTTTCTGAGACATTCAATTTGCCAGCAAATGATCCTGGGACCCTTGTGGTTGAGTTTATATTTTCAATTGTCTGGCAGTTGCTTGATGCAACACTTGTTGATGAAGGGTTATTGGAACTTATTGTGGAAGAGAAATCCAAATGGCCGACAAAACCTCAAGAAATGGAACTAGATGGTCACAATGGTTATGATGATAAATGGACTGAACAACGTGAGAGATTGCGGAATGTAAACATTGAACTGACAATTGAGATAATTGGTAAATTTCTTCAAGATACGGTTACTTCAAGGATTCTTCACTTGGCTTGCAGGAATATGCCTTTGCATTGGGAGGATCTTATTCAGCGACTCCAGTTGCTGGGAGAAAATTCTTCAGTATTGAGAAACTCAAAATCTCTGAACTCAGAGATTTTTCTGCAGTTCACGTCTGATACTTGGACAATCTTCTCTCAAGAATTTAAACAAAATTCACAGCAGAAGTTCCATCCAATTAGAGCATTTGGATCTCCAGCAGCTTCTGCTAGTCTGTGTCGTAGAACTCGTTATTCTGCACTTTGGCTTCCTCTCGATCTAGTTCTAGAAGATGCAATGGATGGATATCAAGTAGAAGCAACAAGTTTAGTCAAAACCCTTAAGGCAATAAATGGAACTAGTTGGCATGATACCTTCTTGGGTCTCTGGATAGCAGCTCTTCGTCTTGTTCAAAGGGAAAGGGATCCCATCGAGGGGCCTGTGCCTCGCATAGACACTCGTCTATGCCTTCTATTGTGTATCACAGTCCTTGTGATTGCTGATCTGATTGCGGAGGAGGAAAGTACGATGATTGATGAAACAGAGTATGTTGCTTCCAATCACTGGAAAGAAAAAAAGGCCCCTGCAAAGTGTCGTAATGAACTAATTTCTAGCCTACAGATATTGGGGGAATATCAGAGCTTGCTGACTCCTCCTCAGGGTGTTGTCTCTGCATGCAATCAGGCGGCTGCCAAAGCAATGATGTTTATATCTGGAATCAGTGTTAGTAATGCATATTTTGAATGCATCAATATGAAAGACATGCCAATGAACTCTTCTGGAAATATGCGTCATTTGATAGTTGAGGCTTGCATTGCTAGAAATCTTCTGGATACATCTGCATATTTCTGGCGTGGCTATGTGAACGGTTGCATTAGCCAAATGCCTCAAAGTATACCACCTCAGGCACCTGGTTGGTCAGCTTTCATGAAGGGGGCTCCACTTAATCATATAATGATAAATGCCTTAACTTCAACTCCTGCTTCAAGCTCGATTATCACCCAACTTGGAGGCATGAGGCAATGTCCTTTCCCACTAGTCGTCCTCACTCCTCAGCTTGGCCCTAAGGGCCAGTCGAGGGAGGTTTTTCTCTCTGCCTCATGGGCCCCTAGCCCAATTGGGATTGGGACTGCCCTGGCCCATGGGCCGGTCTTGTGGGGTGCTCATGGGTTTGATGGAAGCTTAGCAGAACTGGAGAAAATATTTGAGATAGCAGTAAAAGGATCAGATGAAGAGAAGATATCTGCAGCAACAATTCTTTGTGGGGCCTCCTTGATCCGAGGGTGGAATATTCAGGAGCATACTGTCCATTACATTACTAGGTTACTTTCTCCTCCCGTTCCCACGGATTATTCTGGATGTGAAAGTCATCTGATAGGCTATGCTCCAATGCTGAATCTGCTTATTGTTGGAATAGCATCCATAGATTGTGTTCAGATTTTTTCTCTACATGGTTTGGTTCCACAGCTCGCATGTTCACTGATGCCAATCTGTGAGGTTTTTGGTTCATGTGTGCCAAACCTCAATTGGACGTTAACTACAGGGGAAGAAATCTCTGCTCATGCCGTATTTTCAAATGCGTTTACTCTTCTCTTAAAGCTTTGGAGATTTAACCATCCTCCTCTAGATCACGGAGTGGGCGATGCACCCACGGTTGGATCTCAACTTACTCCAGAATATCTACTCTTAGTGAGAAATTCCCATCTGGTATCTGGAAATGTCCACAGAGATCGCAATAAAATGAGACTTTCAGCTGTAGCAAGTTCCTCTTCCCCTCAACCAATATTTGTAGACTCATTTCCCAAATTGAAAGTCTGGTATCGGCAGCATCAAGCATGTATAGCGTCAACCCTCTCTGGTCATGTTCATGGCAACCCAGTTCATCAGACTGTTGATGGACTGCTTACCATGATGTTCCGAAGAATTAATGGGGGAAATCAACCGTTAACTTCAGTTACTTCTGGAAGTAGTAGTTCTTCTGGGCCTGGAAATGAAGATTCTTCTTTAAGACCCAGATTGCCTGCCTGGGATATAATGGAAGCTGTTCCGTTTGTGATTGATGCTGCTCTAACAGCCTGTGCTCATGGAAAGCTTTCTCCTCGTGAGTTGGCTACAGGACTCAAAGATCTAGCCGATTTTCTACCAGCATCTTTAGCCACAATAGTGAGCTACTTTTCTGCAGAAGTTACTCGGGGATTATGGAAACCTGTTTTTATGAATGGAACAGATTGGCCAAGCCCAGCAGAAAACCTTTCTAATGTGGAAGAGCAAATCAAGAAAATCCTAGCTGCTACTGGCGTTGATGTCCCTAGCCTAGCTGCAGGGGGAAGCTCTCCAGCTACACTTCCTCTGCCCTTAGCTGCCTTTCTAAGCCTTACTATAACCTACAAAATTGACAGAGCATCCGAACGTTTCCTCAATTTGGCTGGCCCAGCTTTGGAGTCTCTCGCAGCTGGTTGCCCATGGCCATGCATGCCTATTGTTACTTCCTTGTGGACTCAAAAAGCCAAACGTTGGAGTGATTTCCTGGTCTTTTCAGCATCTCGTACTGTCTTCCTTCAGAACTGCGATGCCGTGGTTCAGCTGCTCAAAAGCTGCTTCACCGCCACCCTAGGCCTGACTGCCAATCCTCTCTCAAATCATGGGGGTGTTGGGGCCCTTCTTGGCCACGGATTCGGATCTCATTTCTGTGGCGGGATTTCTCCTGTTGCTCCAGGAATACTTTTTTTACGCGTCTACCGATCAATTAGAGACGTTGCACTATTGGTTGAAGAGATTCTATCTCTTCTGATGGATTCGGTGAAAGAAATAGCTTGTAATGGTGCCCGGAAAGAGAGATCAGGGAAATTAAAGACAACCAATAATGCAAAAAGATATGGACAGATTTCACTATCTTCAGCAATGACTCAAGTAAAGCTTGCAGCTTCCCTTGGAGCTTCACTAGTATGGCTATCAGGCGGTTTAGTATTGGTTCAATCTGTGATAAAAGAAACGTTGCCTTCTTGGTTCATTTCAGTTCATGGGTCTGAGCAAGAGAAATGTTCAGAGGGAATAGTTTCCATGCTTGGTGGATATGCATTAGCTTACTTTGCAGTTCTATGTGGGGCTTTTGCTTGGGGCACTGATTCTTCATCATCTGCATCGAAGAGACGTCCCAAAATCCTTGGTGTCCATATGGAGTTTCTTGCAAGTGCCCTTGATGGAAAGATATTGCTAGGATGCGATTGGGCCACTTGGCGTGCCTACGTGACTGGATTTGTTAGCCTAATGGTCGGTTGCACACCGAGCTGGGTTCTAGATGTAGATGTGGACGTATTGAAACGATTGAGTAATGGACTAAGGCAATGGAATGAAGAAGAGCTCGCTCTTGCATTGCTTGGACTTGGTGGAGTTGGTACCATTGGCGCAGCTGCTGAACTGATTATTGAAAGTGAAACGTAAGTTTGTTTAACCCATTTTTGTATTCTTTTAGGTCGGTTTCTAGAGTTAGAATAGTTTGTACTATAGTTTTGTTCTATTCTAAAGAGTCCTGTAACCATCAGCTTTAATTATTGAAGTATAGGGTTGTGAGTTAGTTACAGCGTTACTTAAAGCTAACAAATGTAAATTGGTCCATTTCCCACTACTACATTTGAAGATATATATATTTTTTTTCCATAAAGAAACTTGTGAAAAATAAGAATTAAACACCTTCTGAGGGCAGGGCTCATTCCCAATTGTAGTGAATTAATGCAATTGGATATTACAAAAGAATTGATAAAGCTGAAAATTATTGGAAAAAAATAGTCTATTAGGGG

Coding sequence (CDS)

ATGGCGGTATCTGTCCAAAATAGTCTTTGGGACAGAGTTACGGAACTAACCAAGGTGGCTCAACAAAAGGGAGTTGATCCTCTTCTTTGGGCCATTCAGCTGTCTTCGAATTTGAACTCGGCAGGAGTCGCTTTGCCGTCAGTTGAGCTTGCTAACCTGCTGGTTTCGCAAATTTGTTGGGATAATAATGAGCCTGTTTCATGGAAGTTCCTTGAGAAGGCGTTGATGTTGAGTATTGTACCCCCGATTCTCGTTCTTGCCTTGCTCACAACCAGAGTCATTTCAAGAAGACAATTCCAGCCAGTAGCATATAGACTCTATCTGGAACTCCTTCGAAGACATGCTTTTAAACTGAATTCTCATATCCATGGCCTCAAATACGAAGAGGTCATGGCCTCTGTTGATGCTGTTCTTCGTCTTTCTGAGACATTCAATTTGCCAGCAAATGATCCTGGGACCCTTGTGGTTGAGTTTATATTTTCAATTGTCTGGCAGTTGCTTGATGCAACACTTGTTGATGAAGGGTTATTGGAACTTATTGTGGAAGAGAAATCCAAATGGCCGACAAAACCTCAAGAAATGGAACTAGATGGTCACAATGGTTATGATGATAAATGGACTGAACAACGTGAGAGATTGCGGAATGTAAACATTGAACTGACAATTGAGATAATTGGTAAATTTCTTCAAGATACGGTTACTTCAAGGATTCTTCACTTGGCTTGCAGGAATATGCCTTTGCATTGGGAGGATCTTATTCAGCGACTCCAGTTGCTGGGAGAAAATTCTTCAGTATTGAGAAACTCAAAATCTCTGAACTCAGAGATTTTTCTGCAGTTCACGTCTGATACTTGGACAATCTTCTCTCAAGAATTTAAACAAAATTCACAGCAGAAGTTCCATCCAATTAGAGCATTTGGATCTCCAGCAGCTTCTGCTAGTCTGTGTCGTAGAACTCGTTATTCTGCACTTTGGCTTCCTCTCGATCTAGTTCTAGAAGATGCAATGGATGGATATCAAGTAGAAGCAACAAGTTTAGTCAAAACCCTTAAGGCAATAAATGGAACTAGTTGGCATGATACCTTCTTGGGTCTCTGGATAGCAGCTCTTCGTCTTGTTCAAAGGGAAAGGGATCCCATCGAGGGGCCTGTGCCTCGCATAGACACTCGTCTATGCCTTCTATTGTGTATCACAGTCCTTGTGATTGCTGATCTGATTGCGGAGGAGGAAAGTACGATGATTGATGAAACAGAGTATGTTGCTTCCAATCACTGGAAAGAAAAAAAGGCCCCTGCAAAGTGTCGTAATGAACTAATTTCTAGCCTACAGATATTGGGGGAATATCAGAGCTTGCTGACTCCTCCTCAGGGTGTTGTCTCTGCATGCAATCAGGCGGCTGCCAAAGCAATGATGTTTATATCTGGAATCAGTGTTAGTAATGCATATTTTGAATGCATCAATATGAAAGACATGCCAATGAACTCTTCTGGAAATATGCGTCATTTGATAGTTGAGGCTTGCATTGCTAGAAATCTTCTGGATACATCTGCATATTTCTGGCGTGGCTATGTGAACGGTTGCATTAGCCAAATGCCTCAAAGTATACCACCTCAGGCACCTGGTTGGTCAGCTTTCATGAAGGGGGCTCCACTTAATCATATAATGATAAATGCCTTAACTTCAACTCCTGCTTCAAGCTCGATTATCACCCAACTTGGAGGCATGAGGCAATGTCCTTTCCCACTAGTCGTCCTCACTCCTCAGCTTGGCCCTAAGGGCCAGTCGAGGGAGGTTTTTCTCTCTGCCTCATGGGCCCCTAGCCCAATTGGGATTGGGACTGCCCTGGCCCATGGGCCGGTCTTGTGGGGTGCTCATGGGTTTGATGGAAGCTTAGCAGAACTGGAGAAAATATTTGAGATAGCAGTAAAAGGATCAGATGAAGAGAAGATATCTGCAGCAACAATTCTTTGTGGGGCCTCCTTGATCCGAGGGTGGAATATTCAGGAGCATACTGTCCATTACATTACTAGGTTACTTTCTCCTCCCGTTCCCACGGATTATTCTGGATGTGAAAGTCATCTGATAGGCTATGCTCCAATGCTGAATCTGCTTATTGTTGGAATAGCATCCATAGATTGTGTTCAGATTTTTTCTCTACATGGTTTGGTTCCACAGCTCGCATGTTCACTGATGCCAATCTGTGAGGTTTTTGGTTCATGTGTGCCAAACCTCAATTGGACGTTAACTACAGGGGAAGAAATCTCTGCTCATGCCGTATTTTCAAATGCGTTTACTCTTCTCTTAAAGCTTTGGAGATTTAACCATCCTCCTCTAGATCACGGAGTGGGCGATGCACCCACGGTTGGATCTCAACTTACTCCAGAATATCTACTCTTAGTGAGAAATTCCCATCTGGTATCTGGAAATGTCCACAGAGATCGCAATAAAATGAGACTTTCAGCTGTAGCAAGTTCCTCTTCCCCTCAACCAATATTTGTAGACTCATTTCCCAAATTGAAAGTCTGGTATCGGCAGCATCAAGCATGTATAGCGTCAACCCTCTCTGGTCATGTTCATGGCAACCCAGTTCATCAGACTGTTGATGGACTGCTTACCATGATGTTCCGAAGAATTAATGGGGGAAATCAACCGTTAACTTCAGTTACTTCTGGAAGTAGTAGTTCTTCTGGGCCTGGAAATGAAGATTCTTCTTTAAGACCCAGATTGCCTGCCTGGGATATAATGGAAGCTGTTCCGTTTGTGATTGATGCTGCTCTAACAGCCTGTGCTCATGGAAAGCTTTCTCCTCGTGAGTTGGCTACAGGACTCAAAGATCTAGCCGATTTTCTACCAGCATCTTTAGCCACAATAGTGAGCTACTTTTCTGCAGAAGTTACTCGGGGATTATGGAAACCTGTTTTTATGAATGGAACAGATTGGCCAAGCCCAGCAGAAAACCTTTCTAATGTGGAAGAGCAAATCAAGAAAATCCTAGCTGCTACTGGCGTTGATGTCCCTAGCCTAGCTGCAGGGGGAAGCTCTCCAGCTACACTTCCTCTGCCCTTAGCTGCCTTTCTAAGCCTTACTATAACCTACAAAATTGACAGAGCATCCGAACGTTTCCTCAATTTGGCTGGCCCAGCTTTGGAGTCTCTCGCAGCTGGTTGCCCATGGCCATGCATGCCTATTGTTACTTCCTTGTGGACTCAAAAAGCCAAACGTTGGAGTGATTTCCTGGTCTTTTCAGCATCTCGTACTGTCTTCCTTCAGAACTGCGATGCCGTGGTTCAGCTGCTCAAAAGCTGCTTCACCGCCACCCTAGGCCTGACTGCCAATCCTCTCTCAAATCATGGGGGTGTTGGGGCCCTTCTTGGCCACGGATTCGGATCTCATTTCTGTGGCGGGATTTCTCCTGTTGCTCCAGGAATACTTTTTTTACGCGTCTACCGATCAATTAGAGACGTTGCACTATTGGTTGAAGAGATTCTATCTCTTCTGATGGATTCGGTGAAAGAAATAGCTTGTAATGGTGCCCGGAAAGAGAGATCAGGGAAATTAAAGACAACCAATAATGCAAAAAGATATGGACAGATTTCACTATCTTCAGCAATGACTCAAGTAAAGCTTGCAGCTTCCCTTGGAGCTTCACTAGTATGGCTATCAGGCGGTTTAGTATTGGTTCAATCTGTGATAAAAGAAACGTTGCCTTCTTGGTTCATTTCAGTTCATGGGTCTGAGCAAGAGAAATGTTCAGAGGGAATAGTTTCCATGCTTGGTGGATATGCATTAGCTTACTTTGCAGTTCTATGTGGGGCTTTTGCTTGGGGCACTGATTCTTCATCATCTGCATCGAAGAGACGTCCCAAAATCCTTGGTGTCCATATGGAGTTTCTTGCAAGTGCCCTTGATGGAAAGATATTGCTAGGATGCGATTGGGCCACTTGGCGTGCCTACGTGACTGGATTTGTTAGCCTAATGGTCGGTTGCACACCGAGCTGGGTTCTAGATGTAGATGTGGACGTATTGAAACGATTGAGTAATGGACTAAGGCAATGGAATGAAGAAGAGCTCGCTCTTGCATTGCTTGGACTTGGTGGAGTTGGTACCATTGGCGCAGCTGCTGAACTGATTATTGAAAGTGAAACGTAA

Protein sequence

MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICWDNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNSHIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELIVEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHLACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKFHPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEATSLVKTLKAINGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTMIDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFISGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQSIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKGQSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRFNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFVDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSSSSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPASLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGSSPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAKRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFCGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAKRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEGIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAAAELIIESET

Homology

[Close]

BLAST of CcUC06G115080 vs. NCBI nr
Match: XP_038876267.1 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Benincasa hispida])

HSP 1 Score: 2534.2 bits (6567), Expect = 0.0e+00
Identity = 1287/1389 (92.66%), Postives = 1303/1389 (93.81%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVS ICW
Sbjct: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNN+PVSWKFLEKALML+IVPPILVLALLTT+VISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   DNNDPVSWKFLEKALMLNIVPPILVLALLTTKVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGL+Y+EVM SVD+VLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI
Sbjct: 121  HIHGLRYKEVMTSVDSVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL
Sbjct: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMPLHW DLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIF QEFKQNSQQKF
Sbjct: 241  ACRNMPLHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFYQEFKQNSQQKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEEST 
Sbjct: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEYVASNHWKEKKAP KCRNELISSLQILGEYQSLLTPPQ ++SACNQAAAKAMMF+
Sbjct: 421  IDETEYVASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQDIISACNQAAAKAMMFV 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ
Sbjct: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAFMKGAPLNHIMINALTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLAELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWN QEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNFQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQPLTSVTSGSS
Sbjct: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQPLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSGPGNEDSSLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS
Sbjct: 901  SSSGPGNEDSSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRAS+RFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGARKERSGKLKTTNNAK
Sbjct: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGARKERSGKLKTTNNAK 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQEKCSEG
Sbjct: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKI LGCDWA
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDWA 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGLRQWNEEELALALLGLGGVGTIGAA
Sbjct: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1325

Query: 1381 AELIIESET 1383
            AELIIESET
Sbjct: 1381 AELIIESET 1325

[Close]

BLAST of CcUC06G115080 vs. NCBI nr
Match: XP_038876266.1 (mediator of RNA polymerase II transcription subunit 33A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 2529.6 bits (6555), Expect = 0.0e+00
Identity = 1287/1390 (92.59%), Postives = 1303/1390 (93.74%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVS ICW
Sbjct: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNN+PVSWKFLEKALML+IVPPILVLALLTT+VISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   DNNDPVSWKFLEKALMLNIVPPILVLALLTTKVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGL+Y+EVM SVD+VLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI
Sbjct: 121  HIHGLRYKEVMTSVDSVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL
Sbjct: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMPLHW DLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIF QEFKQNSQQKF
Sbjct: 241  ACRNMPLHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFYQEFKQNSQQKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEEST 
Sbjct: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEYVASNHWKEKKAP KCRNELISSLQILGEYQSLLTPPQ ++SACNQAAAKAMMF+
Sbjct: 421  IDETEYVASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQDIISACNQAAAKAMMFV 480

Query: 481  SGISVSNAYFECINMKDMPMNSS-GNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP 540
            SGISVSNAYFECINMKDMPMNSS GNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP
Sbjct: 481  SGISVSNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP 540

Query: 541  QSIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPK 600
            QSIPPQAPGWSAFMKGAPLNHIMINALTSTPAS                           
Sbjct: 541  QSIPPQAPGWSAFMKGAPLNHIMINALTSTPAS--------------------------- 600

Query: 601  GQSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISA 660
                                                 SLAELEKIFEIAVKGSDEEKISA
Sbjct: 601  -------------------------------------SLAELEKIFEIAVKGSDEEKISA 660

Query: 661  ATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASID 720
            ATILCGASLIRGWN QEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLN+LIVGIASID
Sbjct: 661  ATILCGASLIRGWNFQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASID 720

Query: 721  CVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWR 780
            CVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWR
Sbjct: 721  CVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWR 780

Query: 781  FNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIF 840
            FNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVH+DRNKMRLSAVASSSSPQPIF
Sbjct: 781  FNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHKDRNKMRLSAVASSSSPQPIF 840

Query: 841  VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGS 900
            VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQPLTSVTSGS
Sbjct: 841  VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQPLTSVTSGS 900

Query: 901  SSSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA 960
            SSSSGPGNEDSSLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA
Sbjct: 901  SSSSGPGNEDSSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA 960

Query: 961  SLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG 1020
            SLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG
Sbjct: 961  SLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG 1020

Query: 1021 SSPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKA 1080
            SSPATLPLPLAAF+SLTITYKIDRAS+RFLNLAGPALESLAAGCPWPCMPIV SLWTQKA
Sbjct: 1021 SSPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKA 1080

Query: 1081 KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHF 1140
            KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHF
Sbjct: 1081 KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHF 1140

Query: 1141 CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNA 1200
            CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGARKERSGKLKTTNNA
Sbjct: 1141 CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGARKERSGKLKTTNNA 1200

Query: 1201 KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSE 1260
            KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQEKCSE
Sbjct: 1201 KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSE 1260

Query: 1261 GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDW 1320
            GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKI LGCDW
Sbjct: 1261 GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDW 1320

Query: 1321 ATWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGA 1380
            ATWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGLRQWNEEELALALLGLGGVGTIGA
Sbjct: 1321 ATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLRQWNEEELALALLGLGGVGTIGA 1326

Query: 1381 AAELIIESET 1383
            AAELIIESET
Sbjct: 1381 AAELIIESET 1326

[Close]

BLAST of CcUC06G115080 vs. NCBI nr
Match: KAA0033432.1 (mediator of RNA polymerase II transcription subunit 33A-like [Cucumis melo var. makuwa])

HSP 1 Score: 2486.1 bits (6442), Expect = 0.0e+00
Identity = 1263/1388 (90.99%), Postives = 1289/1388 (92.87%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAVSVQN+LWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGV LPSVELANLLVS ICW
Sbjct: 1    MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            +NNEPVSWKFLEKALML+IVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   ENNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVL LSETFNLPANDPGTLVVEFIFSIVWQLLDATL DEGLLELI
Sbjct: 121  HIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            +EEKSKWP KPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFL+D+VTSRIL L
Sbjct: 181  MEEKSKWPAKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDSVTSRILQL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP HW DLIQRLQLLGENSSVLRNSKSL+SEIFLQFTSDTWTIFSQEFKQNSQQKF
Sbjct: 241  ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTSDTWTIFSQEFKQNSQQKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RT YSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTHYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIA+LRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEES  
Sbjct: 361  NGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESAT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEYVAS+HWKEKK P KCRNELISSLQILGEYQSLLTPPQ V+SACNQAAAKAMMF+
Sbjct: 421  IDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFV 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISV+NAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ
Sbjct: 481  SGISVNNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAFMKGA LNHIMIN LTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFMKGALLNHIMINVLTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLAELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTL+TGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLSTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHL+SGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLISGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLK WYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQPLTSVTSGSS
Sbjct: 841  DSFPKLKAWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQPLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSG GNED SLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS
Sbjct: 901  SSSGAGNEDPSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRAS+RFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSN+GGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNNGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGA K++SGKLKTTNNAK
Sbjct: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGAGKDKSGKLKTTNNAK 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQEKCSEG
Sbjct: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGT+SSSSASKRRPKILGVHMEFLASALDGKI LGCDWA
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTESSSSASKRRPKILGVHMEFLASALDGKISLGCDWA 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGLRQWNEEELALALLGLGG GTIGAA
Sbjct: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLRQWNEEELALALLGLGGFGTIGAA 1324

Query: 1381 AELIIESE 1382
            AELIIESE
Sbjct: 1381 AELIIESE 1324

[Close]

BLAST of CcUC06G115080 vs. NCBI nr
Match: XP_008458546.1 (PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 33A-like [Cucumis melo])

HSP 1 Score: 2483.4 bits (6435), Expect = 0.0e+00
Identity = 1262/1388 (90.92%), Postives = 1288/1388 (92.80%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAVSVQN+LWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGV LPSVELANLLVS ICW
Sbjct: 1    MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            +NNEPVSWKFLEKALML+IVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   ENNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVL LSETFNLPANDPGTLVVEFIFSIVWQLLDATL DEGLLELI
Sbjct: 121  HIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            +EEKSKWP KPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFL+D+VTSRIL L
Sbjct: 181  MEEKSKWPAKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDSVTSRILQL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP HW DLIQRLQLLGENSSVLRNSKSL+SEIFLQFTSDTWTIFSQEFKQNSQQKF
Sbjct: 241  ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTSDTWTIFSQEFKQNSQQKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RT YSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTHYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIA+LRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEES  
Sbjct: 361  NGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESAT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEYVAS+HWKEKK P KCRNELISSLQILGEYQSLLTPPQ V+SACNQAAAKAMMF+
Sbjct: 421  IDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFV 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISV+NAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ
Sbjct: 481  SGISVNNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAFMKGA LNHIMIN LTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFMKGALLNHIMINVLTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLAELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTL+TGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLSTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHL+SGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLISGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLK WYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQPLTSVTSGSS
Sbjct: 841  DSFPKLKAWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQPLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSG GNED SLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS
Sbjct: 901  SSSGAGNEDPSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRAS+RFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSN+GGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNNGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGIL LRVYRSIRDVALLVEEILSLLMDSV+EIACNGA K++SGKLKTTNNAK
Sbjct: 1141 GGISPVAPGILXLRVYRSIRDVALLVEEILSLLMDSVREIACNGAGKDKSGKLKTTNNAK 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQEKCSEG
Sbjct: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGT+SSSSASKRRPKILGVHMEFLASALDGKI LGCDWA
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTESSSSASKRRPKILGVHMEFLASALDGKISLGCDWA 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGLRQWNEEELALALLGLGG GTIGAA
Sbjct: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLRQWNEEELALALLGLGGFGTIGAA 1324

Query: 1381 AELIIESE 1382
            AELIIESE
Sbjct: 1381 AELIIESE 1324

[Close]

BLAST of CcUC06G115080 vs. NCBI nr
Match: KAG6575020.1 (Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 2480.3 bits (6427), Expect = 0.0e+00
Identity = 1261/1388 (90.85%), Postives = 1288/1388 (92.80%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAV+V NS WDRVTELTKVAQQKGVDPL WAIQLSSNLNS+GV LPSVELAN+LVS ICW
Sbjct: 1    MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNNEPVSWKFLEKALML+IVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVLRLSETFNLPA+DPGTLVVE+IFSIVW+LLDATLVDEGLL+LI
Sbjct: 121  HIHGLKYKEVMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLVDEGLLDLI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            VEEKSKWPT+PQEMELDGHNGYDDKWTEQRERL+NVN+ELTIEIIGKFLQD VTSRILHL
Sbjct: 181  VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP HW DLIQRLQL+GENSSVLR SKSLNSEIFLQF  DTWTIFSQEFKQNSQ+KF
Sbjct: 241  ACRNMPSHWADLIQRLQLIGENSSVLRKSKSLNSEIFLQF--DTWTIFSQEFKQNSQKKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEEST 
Sbjct: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEY ASNHWKEKKAP KCRNELISSLQILGEYQSLLTPPQGV+SACNQAAAKAMMFI
Sbjct: 421  IDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCI+QMPQ
Sbjct: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAF+KGAPLNHIMI  LTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFVKGAPLNHIMIKVLTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLAELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWNIQEHTVHYITRLLSPPVP DYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPKDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQ LTSVTSGSS
Sbjct: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQSLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSGPGNEDSSLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS
Sbjct: 901  SSSGPGNEDSSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNG+DWPSPA NLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGSDWPSPAANLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGARKERSGKL+TTNN K
Sbjct: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGARKERSGKLRTTNNGK 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAM QVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQE+CSEG
Sbjct: 1201 RYGQISLSSAMIQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEECSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKI LGCDWA
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDWA 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGL+ WNEEELALALLGLGGVGTIGAA
Sbjct: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLKLWNEEELALALLGLGGVGTIGAA 1322

Query: 1381 AELIIESE 1382
            AELIIESE
Sbjct: 1381 AELIIESE 1322

[Close]

BLAST of CcUC06G115080 vs. ExPASy Swiss-Prot
Match: Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)

HSP 1 Score: 1670.6 bits (4325), Expect = 0.0e+00
Identity = 861/1387 (62.08%), Postives = 1043/1387 (75.20%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            M V  + ++WD V ELTK+AQ+  VDP LWA QLSSNL    V LPS ELA ++VS ICW
Sbjct: 1    MVVPGRRTVWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNN P+ WKFLE+A+ L +V P++VLALL  RV+  R  Q  AYR+YLELL+R+ F +  
Sbjct: 61   DNNVPIVWKFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKD 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HI G  Y++VM SV  +LRLSE F+L  + PG L+VEF+F +V QLLDA L DEGLLEL 
Sbjct: 121  HISGPHYQKVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELS 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
             +  S+W  K Q+ME+D    Y++K T   E+L+++N  + IE+I +FL++TV +R+L+L
Sbjct: 181  QDSSSQWLVKSQDMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
               N    W + +Q++QLLGENSS L++SK LNS   LQ  S+    +S + K  S +K 
Sbjct: 241  VSSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKS 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEATS-------LVKTLKAI 360
            + I  FGS ++ A LC     S+LWLPLDLV EDAMDGYQV  TS       L KTLK I
Sbjct: 301  NAIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NG++WHDTFLGLWIAALRLVQRERDPIEGP+PR+DTRLC+ LCI  LV+A+LI E +   
Sbjct: 361  NGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYES 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            + E                K R++L++SLQ+LG++  LL PP+ VVSA N+AA KA++F+
Sbjct: 421  VME----------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFL 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SG +V  + F+ INMKDMP+N SGNMRHLIVEACIARN+LD SAY W GYVNG I+Q+PQ
Sbjct: 481  SGGNVGKSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            S+P + P WS+F+KGAPLN  M+N L S PAS                            
Sbjct: 541  SLPNEVPCWSSFVKGAPLNAAMVNTLVSVPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEK+FE+AVKGSD+EKISAA
Sbjct: 601  ------------------------------------SLAELEKLFEVAVKGSDDEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            T+LCGASL RGWNIQEHTV Y+TRLLSPPVP DYS  E+HLIGYA MLN++IVGI S+D 
Sbjct: 661  TVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDS 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            +QIFSLHG+VPQLACSLMPICE FGS  P+++WTL +GE ISA++VFSNAFTLLLKLWRF
Sbjct: 721  IQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNV-HRDRNKMRLSAVASSSSPQPIF 840
            NHPP++HGVGD PTVGSQLTPE+LL VRNS+LVS  +  RDRN+ RLS VA ++S QP+F
Sbjct: 781  NHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQPVF 840

Query: 841  VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGS 900
            VDSFPKLKVWYRQHQ CIA+TLSG  HG+PVHQTV+ LL M F ++  G+Q L  V SG+
Sbjct: 841  VDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKVR-GSQTLNPVNSGT 900

Query: 901  SSSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA 960
            SSSSG  +EDS++RP  PAWDI++AVP+V+DAALTAC HG+LSPR+LATGLKDLADFLPA
Sbjct: 901  SSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPA 960

Query: 961  SLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG 1020
            SLATIVSYFSAEV+RG+WKPVFMNG DWPSPA NLS VEE I KILA TGVD+PSLA GG
Sbjct: 961  SLATIVSYFSAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGG 1020

Query: 1021 SSPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKA 1080
            SSPATLPLPLAAF+SLTITYKID+ASERFLNLAGPALE LAAGCPWPCMPIV SLWTQKA
Sbjct: 1021 SSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKA 1080

Query: 1081 KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHF 1140
            KRW DFLVFSASRTVFL N DAV+QLL++CF+ATLGL A P+SN GGVGALLGHGFGSHF
Sbjct: 1081 KRWFDFLVFSASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHF 1140

Query: 1141 CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNA 1200
             GGISPVAPGIL+LR+YR++RD   + EEILSLL+ SV++IA N   KE+  KLKT  N 
Sbjct: 1141 YGGISPVAPGILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNG 1200

Query: 1201 KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSE 1260
             RYGQ SL++AMTQVKLAASL ASLVWL+GGL +V  +IKET+PSWF+S   S++E+   
Sbjct: 1201 SRYGQSSLATAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGPS 1260

Query: 1261 GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPK-ILGVHMEFLASALDGKILLGCD 1320
             +V+ L G+ALAYF VLCGA  WG DS SSASKRR + ILG H+EF+ASALDGKI +GC+
Sbjct: 1261 DLVAELRGHALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCE 1305

Query: 1321 WATWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIG 1379
             ATWR Y++G VSLMV C P WV ++D +VLK LSNGLR+W ++ELA+ LL LGG+ T+ 
Sbjct: 1321 TATWRTYISGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMD 1305

[Close]

BLAST of CcUC06G115080 vs. ExPASy Swiss-Prot
Match: F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)

HSP 1 Score: 1424.1 bits (3685), Expect = 0.0e+00
Identity = 793/1406 (56.40%), Postives = 952/1406 (67.71%), Query Frame = 0


Query: 6    QNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICWDNNEP 65
            Q SLW+ VT L + AQ+K VDPL WA+QL   L SAG++LPS +LA  LV+ I W+N+ P
Sbjct: 7    QPSLWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSP 66

Query: 66   VSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNSHIHGL 125
            +SWK LEKA+ ++IVPP+LVLALL+ RVI  R+  P AYRLY+ELL+RHAF     I   
Sbjct: 67   LSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAP 126

Query: 126  KYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELIVEEKS 185
             Y + M S+D +L LSETF +   +PG++++ F+FSIVW+LLDA+L +EGLLEL   ++S
Sbjct: 127  GYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRS 186

Query: 186  KWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHLACRNM 245
            KWP+ P +M+LDG      K  E  + L   N E+ IE+I +FLQ+ VTSRILHLA +NM
Sbjct: 187  KWPSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM 246

Query: 246  PLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKFHPIRA 305
                                                         E K   + +FH I +
Sbjct: 247  ---------------------------------------------ESKTIPRGEFHAIVS 306

Query: 306  FGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAINGTSW 365
             GS  A       T  SALWLP+DL  ED MDG Q  A       T LVK L+A N TSW
Sbjct: 307  SGSKLA------LTSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSW 366

Query: 366  HDTFLGLWIAALRLVQR-------------------ERDPIEGPVPRIDTRLCLLLCITV 425
            HD FL LW+AALRLVQR                   ERDPIEGPVPR DT LC+LL +T 
Sbjct: 367  HDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTP 426

Query: 426  LVIADLIAEEESTMIDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVV 485
            L +A++I EEES  ID+T    SN WKEKK   KCR  LI+SLQ LG+Y+SLLTPP+ V 
Sbjct: 427  LAVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQ 486

Query: 486  SACNQAAAKAMMFISGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYF 545
            S  NQAAAKA+MFISGI+ SN  +E  +M +   ++SG         C  R  L T   F
Sbjct: 487  SVANQAAAKAIMFISGITNSNGSYENTSMSE---SASG--------CCKVRFSLFTLKMF 546

Query: 546  WRGYVNGCISQMPQSIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCP 605
                V G       S       WS  MKG+PL   + N+L +TPAS              
Sbjct: 547  ---VVMGVYLLCNISC------WSLVMKGSPLTPSLTNSLITTPAS-------------- 606

Query: 606  FPLVVLTPQLGPKGQSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFE 665
                                                              SLAE+EK++E
Sbjct: 607  --------------------------------------------------SLAEIEKMYE 666

Query: 666  IAVKGSDEEKISAATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAP 725
            +A  GS++EKI+ A+ILCGASL RGW+IQEH + +I  LLSPP P D SG  SHLI  AP
Sbjct: 667  VATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAP 726

Query: 726  MLNLLIVGIASIDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAV 785
             LN+L+VGI+ IDCV IFSLHG+VP LA +LMPICE FGS VPN+ WTL TGE IS+HAV
Sbjct: 727  FLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAV 786

Query: 786  FSNAFTLLLKLWRFNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHL-VSGNVHRDRNKMR 845
            FS AFTLLL+LWRF+HPPLD+ +GD P VG Q +PEYLLLVRN  L   G   +DR   R
Sbjct: 787  FSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARR 846

Query: 846  LSAVASSSSPQPIFVDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRI 905
              +     S  PIF+DSFP+LK WYRQHQ C+AS LS    G+PVH  VD LL+MMF++ 
Sbjct: 847  RFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKA 906

Query: 906  N-GGNQPLTSVTSGSSSSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPR 965
            N GG+Q LT  +SGSSS S  G +DSS + +LPAWDI+EA PFV+DAALTACAHG LSPR
Sbjct: 907  NKGGSQSLTP-SSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPR 966

Query: 966  ELATGLKDLADFLPASLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKI 1025
            ELATGLK LADFLPA+L T+VSYFS+EVTRGLWKPV MNGTDWPSPA NL++VE+QI+KI
Sbjct: 967  ELATGLKILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKI 1026

Query: 1026 LAATGVDVPSLAAGGSSPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCP 1085
            LAATGVDVP L A G S ATLPLPLAA +SLTITYK+D+A+ERFL L GPAL+SLAA CP
Sbjct: 1027 LAATGVDVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACP 1086

Query: 1086 WPCMPIVTSLWTQKAKRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLT-ANPLSN 1145
            WPCMPIVTSLWTQK KRWSDFL+FSASRTVF  N DAV+QLL+SCFT TLGLT  + L +
Sbjct: 1087 WPCMPIVTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCS 1146

Query: 1146 HGGVGALLGHGFGSHFCGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACN 1205
            +GGVGALLGHGFGS + GGIS  APGIL+++V+RSIRDV  L EEILSLLM SVK IA  
Sbjct: 1147 YGGVGALLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATR 1206

Query: 1206 GARKERSGKLKTTNNAKRY--GQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKET 1265
                 ++ KLK T +  RY  GQ+SLS AM +VKLAASLGASLVW+SGGL LVQ++IKET
Sbjct: 1207 ELPAGQAEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKET 1266

Query: 1266 LPSWFISVHGSEQEKCSEGIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVH 1325
            LPSWFISVHG E E    G+V ML GYALAYFA+L  AFAWG DSS  ASKRRP++L +H
Sbjct: 1267 LPSWFISVHGEEDE--LGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLH 1271

Query: 1326 MEFLASALDGKILLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNE 1381
            +EF+ SAL+GKI LGCDWATW+AYVTGFVSLMV CTP+WVL+VDV+V+KRLS  LRQWNE
Sbjct: 1327 LEFMVSALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNE 1271

[Close]

BLAST of CcUC06G115080 vs. ExPASy TrEMBL
Match: A0A5A7SQH3 (Mediator of RNA polymerase II transcription subunit 33A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00840 PE=4 SV=1)

HSP 1 Score: 2486.1 bits (6442), Expect = 0.0e+00
Identity = 1263/1388 (90.99%), Postives = 1289/1388 (92.87%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAVSVQN+LWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGV LPSVELANLLVS ICW
Sbjct: 1    MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            +NNEPVSWKFLEKALML+IVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   ENNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVL LSETFNLPANDPGTLVVEFIFSIVWQLLDATL DEGLLELI
Sbjct: 121  HIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            +EEKSKWP KPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFL+D+VTSRIL L
Sbjct: 181  MEEKSKWPAKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDSVTSRILQL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP HW DLIQRLQLLGENSSVLRNSKSL+SEIFLQFTSDTWTIFSQEFKQNSQQKF
Sbjct: 241  ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTSDTWTIFSQEFKQNSQQKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RT YSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTHYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIA+LRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEES  
Sbjct: 361  NGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESAT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEYVAS+HWKEKK P KCRNELISSLQILGEYQSLLTPPQ V+SACNQAAAKAMMF+
Sbjct: 421  IDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFV 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISV+NAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ
Sbjct: 481  SGISVNNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAFMKGA LNHIMIN LTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFMKGALLNHIMINVLTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLAELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTL+TGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLSTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHL+SGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLISGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLK WYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQPLTSVTSGSS
Sbjct: 841  DSFPKLKAWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQPLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSG GNED SLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS
Sbjct: 901  SSSGAGNEDPSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRAS+RFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSN+GGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNNGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGA K++SGKLKTTNNAK
Sbjct: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGAGKDKSGKLKTTNNAK 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQEKCSEG
Sbjct: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGT+SSSSASKRRPKILGVHMEFLASALDGKI LGCDWA
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTESSSSASKRRPKILGVHMEFLASALDGKISLGCDWA 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGLRQWNEEELALALLGLGG GTIGAA
Sbjct: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLRQWNEEELALALLGLGGFGTIGAA 1324

Query: 1381 AELIIESE 1382
            AELIIESE
Sbjct: 1381 AELIIESE 1324

[Close]

BLAST of CcUC06G115080 vs. ExPASy TrEMBL
Match: A0A1S3C9B9 (LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 33A-like OS=Cucumis melo OX=3656 GN=LOC103497918 PE=4 SV=1)

HSP 1 Score: 2483.4 bits (6435), Expect = 0.0e+00
Identity = 1262/1388 (90.92%), Postives = 1288/1388 (92.80%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAVSVQN+LWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGV LPSVELANLLVS ICW
Sbjct: 1    MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            +NNEPVSWKFLEKALML+IVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   ENNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVL LSETFNLPANDPGTLVVEFIFSIVWQLLDATL DEGLLELI
Sbjct: 121  HIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            +EEKSKWP KPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFL+D+VTSRIL L
Sbjct: 181  MEEKSKWPAKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDSVTSRILQL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP HW DLIQRLQLLGENSSVLRNSKSL+SEIFLQFTSDTWTIFSQEFKQNSQQKF
Sbjct: 241  ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTSDTWTIFSQEFKQNSQQKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RT YSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTHYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIA+LRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEES  
Sbjct: 361  NGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESAT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEYVAS+HWKEKK P KCRNELISSLQILGEYQSLLTPPQ V+SACNQAAAKAMMF+
Sbjct: 421  IDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFV 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISV+NAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ
Sbjct: 481  SGISVNNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAFMKGA LNHIMIN LTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFMKGALLNHIMINVLTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLAELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTL+TGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLSTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHL+SGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLISGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLK WYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQPLTSVTSGSS
Sbjct: 841  DSFPKLKAWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQPLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSG GNED SLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS
Sbjct: 901  SSSGAGNEDPSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRAS+RFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSN+GGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNNGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGIL LRVYRSIRDVALLVEEILSLLMDSV+EIACNGA K++SGKLKTTNNAK
Sbjct: 1141 GGISPVAPGILXLRVYRSIRDVALLVEEILSLLMDSVREIACNGAGKDKSGKLKTTNNAK 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQEKCSEG
Sbjct: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGT+SSSSASKRRPKILGVHMEFLASALDGKI LGCDWA
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTESSSSASKRRPKILGVHMEFLASALDGKISLGCDWA 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGLRQWNEEELALALLGLGG GTIGAA
Sbjct: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLRQWNEEELALALLGLGGFGTIGAA 1324

Query: 1381 AELIIESE 1382
            AELIIESE
Sbjct: 1381 AELIIESE 1324

[Close]

BLAST of CcUC06G115080 vs. ExPASy TrEMBL
Match: A0A6J1L4A6 (mediator of RNA polymerase II transcription subunit 33A isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499010 PE=4 SV=1)

HSP 1 Score: 2473.7 bits (6410), Expect = 0.0e+00
Identity = 1258/1389 (90.57%), Postives = 1285/1389 (92.51%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAV+V NS WDRVTELTKVAQQKGVDPL WAIQLSSNLNS+GV LPSVELAN+LVS ICW
Sbjct: 1    MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNNEPVSWKFLEKALML+IVPPILVLALL TRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   DNNEPVSWKFLEKALMLNIVPPILVLALLATRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVLRLSETFNLPA+DPGTLVVE+IFSIVW+LLDATL DEGLL+LI
Sbjct: 121  HIHGLKYKEVMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLTDEGLLDLI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            VEEKSKWPT+PQEMELDGHNGYDDKWTEQRERL+NVN+ELTIEIIGKFLQD VTSRILHL
Sbjct: 181  VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP HW DLIQRLQLLGENSSVLR SKSLNSEIFLQF  DTWTIFSQEFK+NSQ+KF
Sbjct: 241  ACRNMPSHWADLIQRLQLLGENSSVLRKSKSLNSEIFLQF--DTWTIFSQEFKKNSQKKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEEST 
Sbjct: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETE  ASNHWKEKKAP KCRNELISSLQILGEYQSLLTPPQGV+SACNQAAAKAMMFI
Sbjct: 421  IDETECGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCI+QMPQ
Sbjct: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAF+KGAPLNHIMI  LTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFVKGAPLNHIMIKVLTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SL ELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLTELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWNIQEHTVHYITRLLSPPVP DYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPKDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQPLTSVTSGSS
Sbjct: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQPLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSGPGNEDSSLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS
Sbjct: 901  SSSGPGNEDSSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNG+DWPSPA NLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGSDWPSPAANLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGARKERSGKL+TTNN K
Sbjct: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGARKERSGKLRTTNNGK 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAM QVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQE+CSEG
Sbjct: 1201 RYGQISLSSAMIQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEECSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKI LGCDW 
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDWD 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLSNGL+ WNEEELALALLGLGGVGTIGAA
Sbjct: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSNGLKLWNEEELALALLGLGGVGTIGAA 1323

Query: 1381 AELIIESET 1383
            AELIIESET
Sbjct: 1381 AELIIESET 1323

[Close]

BLAST of CcUC06G115080 vs. ExPASy TrEMBL
Match: A0A6J1H3D3 (mediator of RNA polymerase II transcription subunit 33A isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460123 PE=4 SV=1)

HSP 1 Score: 2472.2 bits (6406), Expect = 0.0e+00
Identity = 1256/1388 (90.49%), Postives = 1286/1388 (92.65%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAV+V NS WDRVTELTKVAQQKGVDPL WAIQLSSNLNS+GV LPSVELAN+LVS ICW
Sbjct: 1    MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNNEPVSWKFLEKALML+IVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 61   DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVLRLSETFNLPA+DPGTLVVE+IFSIVW+LLDATLVDEGLL+LI
Sbjct: 121  HIHGLKYKEVMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLVDEGLLDLI 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            VEEKSKWPT+PQEMELDGHNGYDDKWTEQRERL+NVN+ELTIEIIGKFLQD VTSRILHL
Sbjct: 181  VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP HW DLIQRLQL+GENSSVLR SKS NSEIFLQF  DTWTIFSQEFKQNSQ+KF
Sbjct: 241  ACRNMPSHWADLIQRLQLIGENSSVLRKSKSFNSEIFLQF--DTWTIFSQEFKQNSQKKF 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPA+SASLC RTRYSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKAI
Sbjct: 301  HPIRAFGSPASSASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEEST 
Sbjct: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEY ASNHWKEKKAP KCRNELISSLQILGEYQSLLTPPQGV+SACNQAAAKAMMFI
Sbjct: 421  IDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCI+QMPQ
Sbjct: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            SIPPQAPGWSAF+KGAPLNHIMI  LTSTPAS                            
Sbjct: 541  SIPPQAPGWSAFVKGAPLNHIMIKVLTSTPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEKIFEIAVKGSDEEKISAA
Sbjct: 601  ------------------------------------SLAELEKIFEIAVKGSDEEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            TILCGASLIRGWNIQEHTVHYITRLLSPPVP DYSGCESHLIGYAPMLN+LIVGIASIDC
Sbjct: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPKDYSGCESHLIGYAPMLNVLIVGIASIDC 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF
Sbjct: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIFV 840
            NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVH+DRNKMRLSAVASSSSPQPIFV
Sbjct: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHKDRNKMRLSAVASSSSPQPIFV 840

Query: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGSS 900
            DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGGNQ LTSVTSGSS
Sbjct: 841  DSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGNQSLTSVTSGSS 900

Query: 901  SSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPAS 960
            SSSGPGNEDSSLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKD+ADFLPAS
Sbjct: 901  SSSGPGNEDSSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDIADFLPAS 960

Query: 961  LATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGGS 1020
            LATIVSYFSAEVTRGLWKPVFMNG+DWPSPA NLSNVEEQIKKILAATGVDVPSLAAGGS
Sbjct: 961  LATIVSYFSAEVTRGLWKPVFMNGSDWPSPAANLSNVEEQIKKILAATGVDVPSLAAGGS 1020

Query: 1021 SPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKAK 1080
            SPATLPLPLAAF+SLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIV SLWTQKAK
Sbjct: 1021 SPATLPLPLAAFVSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVASLWTQKAK 1080

Query: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140
            RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC
Sbjct: 1081 RWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHFC 1140

Query: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNAK 1200
            GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGARKERSGKL+TTNN +
Sbjct: 1141 GGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGARKERSGKLRTTNNGE 1200

Query: 1201 RYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSEG 1260
            RYGQISLSSAM QVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQE+CSEG
Sbjct: 1201 RYGQISLSSAMIQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEECSEG 1260

Query: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDWA 1320
            IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKI LGCDWA
Sbjct: 1261 IVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDWA 1320

Query: 1321 TWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGAA 1380
            TWRAYVT FVSLMVGCTPSWVLDVDV+VLKRLSNGL+ WNEEELALALLGLGGVGTIGAA
Sbjct: 1321 TWRAYVTRFVSLMVGCTPSWVLDVDVEVLKRLSNGLKLWNEEELALALLGLGGVGTIGAA 1322

Query: 1381 AELIIESE 1382
            AELIIESE
Sbjct: 1381 AELIIESE 1322

[Close]

BLAST of CcUC06G115080 vs. ExPASy TrEMBL
Match: A0A0A0KHK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239160 PE=4 SV=1)

HSP 1 Score: 2470.3 bits (6401), Expect = 0.0e+00
Identity = 1258/1389 (90.57%), Postives = 1289/1389 (92.80%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            MAVSVQN+LWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGV LPSVELANLLVS ICW
Sbjct: 50   MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 109

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNNEPVSWKFLEKAL+L+IVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKL S
Sbjct: 110  DNNEPVSWKFLEKALILNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 169

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HIHGLKY+EVMASVDAVL LSETFNLPANDPGTLVVEFIFSIVWQLLDATL DEGLLELI
Sbjct: 170  HIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELI 229

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
            +EEKSKWP K  EMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFL+DTVTSRILHL
Sbjct: 230  MEEKSKWPAKSPEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDTVTSRILHL 289

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
            ACRNMP +W DLIQRLQLLGENSSVLRNSKSL+SEIFLQFT+DTWTIFSQEFKQNS+QKF
Sbjct: 290  ACRNMPSNWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTADTWTIFSQEFKQNSKQKF 349

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAI 360
            HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEA       TSLVKTLKA+
Sbjct: 350  HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAV 409

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NGTSWHDTFLGLWIA+LRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLI EEE   
Sbjct: 410  NGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEEIAT 469

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            IDETEYVAS+HWKEKK P KCRNELISSLQILGEYQSLLTPPQ V+SACNQAAAKAMMFI
Sbjct: 470  IDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFI 529

Query: 481  SGISVSNAYFECINMKDMPMNSS-GNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP 540
            SGISV+NAYFECINMKDMPMNSS GNMRHLIVEACIARNLLDTSAY+WRGYVNGCISQMP
Sbjct: 530  SGISVNNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYYWRGYVNGCISQMP 589

Query: 541  QSIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPK 600
            QSIPPQAPGWSAFMKGA LNHIMIN LTSTPAS                           
Sbjct: 590  QSIPPQAPGWSAFMKGALLNHIMINVLTSTPAS--------------------------- 649

Query: 601  GQSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISA 660
                                                 SLAELEKIFEIAVKGSDEEKISA
Sbjct: 650  -------------------------------------SLAELEKIFEIAVKGSDEEKISA 709

Query: 661  ATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASID 720
            ATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLN+LIVGIASID
Sbjct: 710  ATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNVLIVGIASID 769

Query: 721  CVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWR 780
            CVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTL+TGEEISAHAVFSNAFTLLLKLWR
Sbjct: 770  CVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLSTGEEISAHAVFSNAFTLLLKLWR 829

Query: 781  FNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHRDRNKMRLSAVASSSSPQPIF 840
            FNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVH+DRNKMRLSAVASSSSPQPIF
Sbjct: 830  FNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNVHKDRNKMRLSAVASSSSPQPIF 889

Query: 841  VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGS 900
            VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLL MMFRRINGG+QPLTSVTSGS
Sbjct: 890  VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLNMMFRRINGGSQPLTSVTSGS 949

Query: 901  SSSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA 960
            SSSSG GNED SLRP+LPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA
Sbjct: 950  SSSSGAGNEDPSLRPKLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA 1009

Query: 961  SLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG 1020
            SLATIVSYFSAEVTRGLWKPV+MNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG
Sbjct: 1010 SLATIVSYFSAEVTRGLWKPVYMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG 1069

Query: 1021 SSPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKA 1080
            SSPATLPLPLAAF+SLTITYKIDRAS+RFLNLAGPALESLAAGCPWPCMPIV SLWTQKA
Sbjct: 1070 SSPATLPLPLAAFVSLTITYKIDRASQRFLNLAGPALESLAAGCPWPCMPIVASLWTQKA 1129

Query: 1081 KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHF 1140
            KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLS++GGVGALLGHGFGSHF
Sbjct: 1130 KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSSNGGVGALLGHGFGSHF 1189

Query: 1141 CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNA 1200
            CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSV+EIACNGA K++SGKLKTTNNA
Sbjct: 1190 CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVREIACNGAGKDKSGKLKTTNNA 1249

Query: 1201 KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSE 1260
            KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVH SEQEKCSE
Sbjct: 1250 KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHRSEQEKCSE 1309

Query: 1261 GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKILLGCDW 1320
            GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKI LGCDW
Sbjct: 1310 GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVHMEFLASALDGKISLGCDW 1369

Query: 1321 ATWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIGA 1380
            ATWRAYVTGFVSLMVGCTPSWVLDVDV+VLKRLS+GLRQWNEEELALALLGLGGVG IGA
Sbjct: 1370 ATWRAYVTGFVSLMVGCTPSWVLDVDVEVLKRLSSGLRQWNEEELALALLGLGGVGAIGA 1374

Query: 1381 AAELIIESE 1382
            AAELIIESE
Sbjct: 1430 AAELIIESE 1374

[Close]

BLAST of CcUC06G115080 vs. TAIR 10
Match: AT3G23590.1 (REF4-related 1 )

HSP 1 Score: 1670.6 bits (4325), Expect = 0.0e+00
Identity = 861/1387 (62.08%), Postives = 1043/1387 (75.20%), Query Frame = 0


Query: 1    MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICW 60
            M V  + ++WD V ELTK+AQ+  VDP LWA QLSSNL    V LPS ELA ++VS ICW
Sbjct: 1    MVVPGRRTVWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICW 60

Query: 61   DNNEPVSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNS 120
            DNN P+ WKFLE+A+ L +V P++VLALL  RV+  R  Q  AYR+YLELL+R+ F +  
Sbjct: 61   DNNVPIVWKFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKD 120

Query: 121  HIHGLKYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180
            HI G  Y++VM SV  +LRLSE F+L  + PG L+VEF+F +V QLLDA L DEGLLEL 
Sbjct: 121  HISGPHYQKVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELS 180

Query: 181  VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240
             +  S+W  K Q+ME+D    Y++K T   E+L+++N  + IE+I +FL++TV +R+L+L
Sbjct: 181  QDSSSQWLVKSQDMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYL 240

Query: 241  ACRNMPLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKF 300
               N    W + +Q++QLLGENSS L++SK LNS   LQ  S+    +S + K  S +K 
Sbjct: 241  VSSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKS 300

Query: 301  HPIRAFGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEATS-------LVKTLKAI 360
            + I  FGS ++ A LC     S+LWLPLDLV EDAMDGYQV  TS       L KTLK I
Sbjct: 301  NAIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEI 360

Query: 361  NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIAEEESTM 420
            NG++WHDTFLGLWIAALRLVQRERDPIEGP+PR+DTRLC+ LCI  LV+A+LI E +   
Sbjct: 361  NGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYES 420

Query: 421  IDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVVSACNQAAAKAMMFI 480
            + E                K R++L++SLQ+LG++  LL PP+ VVSA N+AA KA++F+
Sbjct: 421  VME----------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFL 480

Query: 481  SGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMPQ 540
            SG +V  + F+ INMKDMP+N SGNMRHLIVEACIARN+LD SAY W GYVNG I+Q+PQ
Sbjct: 481  SGGNVGKSCFDVINMKDMPVNCSGNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIPQ 540

Query: 541  SIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCPFPLVVLTPQLGPKG 600
            S+P + P WS+F+KGAPLN  M+N L S PAS                            
Sbjct: 541  SLPNEVPCWSSFVKGAPLNAAMVNTLVSVPAS---------------------------- 600

Query: 601  QSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFEIAVKGSDEEKISAA 660
                                                SLAELEK+FE+AVKGSD+EKISAA
Sbjct: 601  ------------------------------------SLAELEKLFEVAVKGSDDEKISAA 660

Query: 661  TILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAPMLNLLIVGIASIDC 720
            T+LCGASL RGWNIQEHTV Y+TRLLSPPVP DYS  E+HLIGYA MLN++IVGI S+D 
Sbjct: 661  TVLCGASLTRGWNIQEHTVEYLTRLLSPPVPADYSRAENHLIGYACMLNVVIVGIGSVDS 720

Query: 721  VQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAVFSNAFTLLLKLWRF 780
            +QIFSLHG+VPQLACSLMPICE FGS  P+++WTL +GE ISA++VFSNAFTLLLKLWRF
Sbjct: 721  IQIFSLHGMVPQLACSLMPICEEFGSYTPSVSWTLPSGEAISAYSVFSNAFTLLLKLWRF 780

Query: 781  NHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHLVSGNV-HRDRNKMRLSAVASSSSPQPIF 840
            NHPP++HGVGD PTVGSQLTPE+LL VRNS+LVS  +  RDRN+ RLS VA ++S QP+F
Sbjct: 781  NHPPIEHGVGDVPTVGSQLTPEHLLSVRNSYLVSSEILDRDRNRKRLSEVARAASCQPVF 840

Query: 841  VDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRINGGNQPLTSVTSGS 900
            VDSFPKLKVWYRQHQ CIA+TLSG  HG+PVHQTV+ LL M F ++  G+Q L  V SG+
Sbjct: 841  VDSFPKLKVWYRQHQRCIAATLSGLTHGSPVHQTVEALLNMTFGKVR-GSQTLNPVNSGT 900

Query: 901  SSSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPRELATGLKDLADFLPA 960
            SSSSG  +EDS++RP  PAWDI++AVP+V+DAALTAC HG+LSPR+LATGLKDLADFLPA
Sbjct: 901  SSSSGAASEDSNIRPEFPAWDILKAVPYVVDAALTACTHGRLSPRQLATGLKDLADFLPA 960

Query: 961  SLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKILAATGVDVPSLAAGG 1020
            SLATIVSYFSAEV+RG+WKPVFMNG DWPSPA NLS VEE I KILA TGVD+PSLA GG
Sbjct: 961  SLATIVSYFSAEVSRGVWKPVFMNGVDWPSPATNLSTVEEYITKILATTGVDIPSLAPGG 1020

Query: 1021 SSPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCPWPCMPIVTSLWTQKA 1080
            SSPATLPLPLAAF+SLTITYKID+ASERFLNLAGPALE LAAGCPWPCMPIV SLWTQKA
Sbjct: 1021 SSPATLPLPLAAFVSLTITYKIDKASERFLNLAGPALECLAAGCPWPCMPIVASLWTQKA 1080

Query: 1081 KRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLTANPLSNHGGVGALLGHGFGSHF 1140
            KRW DFLVFSASRTVFL N DAV+QLL++CF+ATLGL A P+SN GGVGALLGHGFGSHF
Sbjct: 1081 KRWFDFLVFSASRTVFLHNQDAVIQLLRNCFSATLGLNAAPMSNDGGVGALLGHGFGSHF 1140

Query: 1141 CGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACNGARKERSGKLKTTNNA 1200
             GGISPVAPGIL+LR+YR++RD   + EEILSLL+ SV++IA N   KE+  KLKT  N 
Sbjct: 1141 YGGISPVAPGILYLRMYRALRDTVSVSEEILSLLIHSVEDIAQNRLSKEKLEKLKTVKNG 1200

Query: 1201 KRYGQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKETLPSWFISVHGSEQEKCSE 1260
             RYGQ SL++AMTQVKLAASL ASLVWL+GGL +V  +IKET+PSWF+S   S++E+   
Sbjct: 1201 SRYGQSSLATAMTQVKLAASLSASLVWLTGGLGVVHVLIKETIPSWFLSTDKSDREQGPS 1260

Query: 1261 GIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPK-ILGVHMEFLASALDGKILLGCD 1320
             +V+ L G+ALAYF VLCGA  WG DS SSASKRR + ILG H+EF+ASALDGKI +GC+
Sbjct: 1261 DLVAELRGHALAYFVVLCGALTWGVDSRSSASKRRRQAILGSHLEFIASALDGKISVGCE 1305

Query: 1321 WATWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNEEELALALLGLGGVGTIG 1379
             ATWR Y++G VSLMV C P WV ++D +VLK LSNGLR+W ++ELA+ LL LGG+ T+ 
Sbjct: 1321 TATWRTYISGLVSLMVSCLPLWVTEIDTEVLKSLSNGLRKWGKDELAIVLLSLGGLKTMD 1305

[Close]

BLAST of CcUC06G115080 vs. TAIR 10
Match: AT2G48110.1 (reduced epidermal fluorescence 4 )

HSP 1 Score: 1424.1 bits (3685), Expect = 0.0e+00
Identity = 793/1406 (56.40%), Postives = 952/1406 (67.71%), Query Frame = 0


Query: 6    QNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSQICWDNNEP 65
            Q SLW+ VT L + AQ+K VDPL WA+QL   L SAG++LPS +LA  LV+ I W+N+ P
Sbjct: 7    QPSLWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSP 66

Query: 66   VSWKFLEKALMLSIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLNSHIHGL 125
            +SWK LEKA+ ++IVPP+LVLALL+ RVI  R+  P AYRLY+ELL+RHAF     I   
Sbjct: 67   LSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAP 126

Query: 126  KYEEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELIVEEKS 185
             Y + M S+D +L LSETF +   +PG++++ F+FSIVW+LLDA+L +EGLLEL   ++S
Sbjct: 127  GYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRS 186

Query: 186  KWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHLACRNM 245
            KWP+ P +M+LDG      K  E  + L   N E+ IE+I +FLQ+ VTSRILHLA +NM
Sbjct: 187  KWPSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM 246

Query: 246  PLHWEDLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQEFKQNSQQKFHPIRA 305
                                                         E K   + +FH I +
Sbjct: 247  ---------------------------------------------ESKTIPRGEFHAIVS 306

Query: 306  FGSPAASASLCRRTRYSALWLPLDLVLEDAMDGYQVEA-------TSLVKTLKAINGTSW 365
             GS  A       T  SALWLP+DL  ED MDG Q  A       T LVK L+A N TSW
Sbjct: 307  SGSKLA------LTSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSW 366

Query: 366  HDTFLGLWIAALRLVQR-------------------ERDPIEGPVPRIDTRLCLLLCITV 425
            HD FL LW+AALRLVQR                   ERDPIEGPVPR DT LC+LL +T 
Sbjct: 367  HDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTP 426

Query: 426  LVIADLIAEEESTMIDETEYVASNHWKEKKAPAKCRNELISSLQILGEYQSLLTPPQGVV 485
            L +A++I EEES  ID+T    SN WKEKK   KCR  LI+SLQ LG+Y+SLLTPP+ V 
Sbjct: 427  LAVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQ 486

Query: 486  SACNQAAAKAMMFISGISVSNAYFECINMKDMPMNSSGNMRHLIVEACIARNLLDTSAYF 545
            S  NQAAAKA+MFISGI+ SN  +E  +M +   ++SG         C  R  L T   F
Sbjct: 487  SVANQAAAKAIMFISGITNSNGSYENTSMSE---SASG--------CCKVRFSLFTLKMF 546

Query: 546  WRGYVNGCISQMPQSIPPQAPGWSAFMKGAPLNHIMINALTSTPASSSIITQLGGMRQCP 605
                V G       S       WS  MKG+PL   + N+L +TPAS              
Sbjct: 547  ---VVMGVYLLCNISC------WSLVMKGSPLTPSLTNSLITTPAS-------------- 606

Query: 606  FPLVVLTPQLGPKGQSREVFLSASWAPSPIGIGTALAHGPVLWGAHGFDGSLAELEKIFE 665
                                                              SLAE+EK++E
Sbjct: 607  --------------------------------------------------SLAEIEKMYE 666

Query: 666  IAVKGSDEEKISAATILCGASLIRGWNIQEHTVHYITRLLSPPVPTDYSGCESHLIGYAP 725
            +A  GS++EKI+ A+ILCGASL RGW+IQEH + +I  LLSPP P D SG  SHLI  AP
Sbjct: 667  VATTGSEDEKIAVASILCGASLFRGWSIQEHVIIFIVTLLSPPAPADLSGSYSHLINSAP 726

Query: 726  MLNLLIVGIASIDCVQIFSLHGLVPQLACSLMPICEVFGSCVPNLNWTLTTGEEISAHAV 785
             LN+L+VGI+ IDCV IFSLHG+VP LA +LMPICE FGS VPN+ WTL TGE IS+HAV
Sbjct: 727  FLNVLLVGISPIDCVHIFSLHGVVPLLAGALMPICEAFGSGVPNITWTLPTGELISSHAV 786

Query: 786  FSNAFTLLLKLWRFNHPPLDHGVGDAPTVGSQLTPEYLLLVRNSHL-VSGNVHRDRNKMR 845
            FS AFTLLL+LWRF+HPPLD+ +GD P VG Q +PEYLLLVRN  L   G   +DR   R
Sbjct: 787  FSTAFTLLLRLWRFDHPPLDYVLGDVPPVGPQPSPEYLLLVRNCRLECFGKSPKDRMARR 846

Query: 846  LSAVASSSSPQPIFVDSFPKLKVWYRQHQACIASTLSGHVHGNPVHQTVDGLLTMMFRRI 905
              +     S  PIF+DSFP+LK WYRQHQ C+AS LS    G+PVH  VD LL+MMF++ 
Sbjct: 847  RFSKVIDISVDPIFMDSFPRLKQWYRQHQECMASILSELKTGSPVHHIVDSLLSMMFKKA 906

Query: 906  N-GGNQPLTSVTSGSSSSSGPGNEDSSLRPRLPAWDIMEAVPFVIDAALTACAHGKLSPR 965
            N GG+Q LT  +SGSSS S  G +DSS + +LPAWDI+EA PFV+DAALTACAHG LSPR
Sbjct: 907  NKGGSQSLTP-SSGSSSLSTSGGDDSSDQLKLPAWDILEAAPFVLDAALTACAHGSLSPR 966

Query: 966  ELATGLKDLADFLPASLATIVSYFSAEVTRGLWKPVFMNGTDWPSPAENLSNVEEQIKKI 1025
            ELATGLK LADFLPA+L T+VSYFS+EVTRGLWKPV MNGTDWPSPA NL++VE+QI+KI
Sbjct: 967  ELATGLKILADFLPATLGTMVSYFSSEVTRGLWKPVSMNGTDWPSPAANLASVEQQIEKI 1026

Query: 1026 LAATGVDVPSLAAGGSSPATLPLPLAAFLSLTITYKIDRASERFLNLAGPALESLAAGCP 1085
            LAATGVDVP L A G S ATLPLPLAA +SLTITYK+D+A+ERFL L GPAL+SLAA CP
Sbjct: 1027 LAATGVDVPRLPADGISAATLPLPLAALVSLTITYKLDKATERFLVLVGPALDSLAAACP 1086

Query: 1086 WPCMPIVTSLWTQKAKRWSDFLVFSASRTVFLQNCDAVVQLLKSCFTATLGLT-ANPLSN 1145
            WPCMPIVTSLWTQK KRWSDFL+FSASRTVF  N DAV+QLL+SCFT TLGLT  + L +
Sbjct: 1087 WPCMPIVTSLWTQKVKRWSDFLIFSASRTVFHHNRDAVIQLLRSCFTCTLGLTPTSQLCS 1146

Query: 1146 HGGVGALLGHGFGSHFCGGISPVAPGILFLRVYRSIRDVALLVEEILSLLMDSVKEIACN 1205
            +GGVGALLGHGFGS + GGIS  APGIL+++V+RSIRDV  L EEILSLLM SVK IA  
Sbjct: 1147 YGGVGALLGHGFGSRYSGGISTAAPGILYIKVHRSIRDVMFLTEEILSLLMFSVKSIATR 1206

Query: 1206 GARKERSGKLKTTNNAKRY--GQISLSSAMTQVKLAASLGASLVWLSGGLVLVQSVIKET 1265
                 ++ KLK T +  RY  GQ+SLS AM +VKLAASLGASLVW+SGGL LVQ++IKET
Sbjct: 1207 ELPAGQAEKLKKTKDGSRYGIGQVSLSLAMRRVKLAASLGASLVWISGGLNLVQALIKET 1266

Query: 1266 LPSWFISVHGSEQEKCSEGIVSMLGGYALAYFAVLCGAFAWGTDSSSSASKRRPKILGVH 1325
            LPSWFISVHG E E    G+V ML GYALAYFA+L  AFAWG DSS  ASKRRP++L +H
Sbjct: 1267 LPSWFISVHGEEDE--LGGMVPMLRGYALAYFAILSSAFAWGVDSSYPASKRRPRVLWLH 1271

Query: 1326 MEFLASALDGKILLGCDWATWRAYVTGFVSLMVGCTPSWVLDVDVDVLKRLSNGLRQWNE 1381
            +EF+ SAL+GKI LGCDWATW+AYVTGFVSLMV CTP+WVL+VDV+V+KRLS  LRQWNE
Sbjct: 1327 LEFMVSALEGKISLGCDWATWQAYVTGFVSLMVQCTPAWVLEVDVEVIKRLSKSLRQWNE 1271

The following BLAST results are available for this feature:

BLAST of CcUC06G115080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876267.1	0.0e+00	92.66	mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Beninca...	[more]
XP_038876266.1	0.0e+00	92.59	mediator of RNA polymerase II transcription subunit 33A-like isoform X1 [Beninca...	[more]
KAA0033432.1	0.0e+00	90.99	mediator of RNA polymerase II transcription subunit 33A-like [Cucumis melo var. ...	[more]
XP_008458546.1	0.0e+00	90.92	PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subu...	[more]
KAG6575020.1	0.0e+00	90.85	Mediator of RNA polymerase II transcription subunit 33A, partial [Cucurbita argy...	[more]

BLAST of CcUC06G115080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG9	0.0e+00	62.08	Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ...	[more]
F4IN69	0.0e+00	56.40	Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ...	[more]

BLAST of CcUC06G115080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SQH3	0.0e+00	90.99	Mediator of RNA polymerase II transcription subunit 33A-like OS=Cucumis melo var...	[more]
A0A1S3C9B9	0.0e+00	90.92	LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 33A-lik...	[more]
A0A6J1L4A6	0.0e+00	90.57	mediator of RNA polymerase II transcription subunit 33A isoform X2 OS=Cucurbita ...	[more]
A0A6J1H3D3	0.0e+00	90.49	mediator of RNA polymerase II transcription subunit 33A isoform X2 OS=Cucurbita ...	[more]
A0A0A0KHK6	0.0e+00	90.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239160 PE=4 SV=1	[more]

BLAST of CcUC06G115080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23590.1	0.0e+00	62.08	REF4-related 1	[more]
AT2G48110.1	0.0e+00	56.40	reduced epidermal fluorescence 4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 885..902
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 885..906
None	No IPR available	PANTHER	PTHR33739:SF5	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A	coord: 8..1379
IPR039638	Mediator of RNA polymerase II transcription subunit 33A/B	PANTHER	PTHR33739	OS07G0681500 PROTEIN	coord: 8..1379

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G115080.1	CcUC06G115080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016592	mediator complex