CcUC06G114880 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G114880
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 6104154 .. 6104546 (+)
RNA-Seq ExpressionCcUC06G114880
SyntenyCcUC06G114880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGGAATGGTGATGGTGATCGAGATCAAGCTGCCATTGGATTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACTACGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGTCGAGTAATGATGTGGGTGTAATTCATAATACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGCATGGCAGGTGGGTATCCCTGA

mRNA sequence

ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGGAATGGTGATGGTGATCGAGATCAAGCTGCCATTGGATTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACTACGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGTCGAGTAATGATGTGGGTGTAATTCATAATACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGCATGGCAGGTGGGTATCCCTGA

Coding sequence (CDS)

ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGGAATGGTGATGGTGATCGAGATCAAGCTGCCATTGGATTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACTACGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGTCGAGTAATGATGTGGGTGTAATTCATAATACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGCATGGCAGGTGGGTATCCCTGA

Protein sequence

MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYSYKEEEEESSNDVGVIHNTDEMEDKLFWDTCMAGGYP
Homology
BLAST of CcUC06G114880 vs. NCBI nr
Match: KAA0033453.1 (hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa])

HSP 1 Score: 197.6 bits (501), Expect = 6.7e-47
Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 0

Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRS 60
           MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDACSCSC  NDF+ DDLR+
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60

Query: 61  LDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYSY----KEEEEESSNDVGVIHNT 120
           LDFQDDGD NGD D DQ  I LIGDG RRRSG  L+Y Y    +EEEEESS+DVGVI N 
Sbjct: 61  LDFQDDGD-NGDRDLDQ-DICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNM 120

Query: 121 DEMEDKLFWDTCMAGGYP 131
           +EMEDKLFWDTCMAGGYP
Sbjct: 121 NEMEDKLFWDTCMAGGYP 136

BLAST of CcUC06G114880 vs. NCBI nr
Match: KAG6575041.1 (hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 0

Query: 4   IKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSLDFQDDG 63
           + +ASS FLWED+ADSEVDRLLSHPH+LESAVDD EDA SCSC+D+AT D  ++D QDDG
Sbjct: 1   MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYAT-DRSAVDLQDDG 60

Query: 64  DGNGDGDRDQAAIGLIGD-------GERRRSGTTLEYSY---KEEEEESSNDVGVIHNTD 123
           DG+ D      A+G  GD        E R SG TLEYS    +EEEEES+N+VG I + +
Sbjct: 61  DGDED-----RAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMN 120

Query: 124 EMEDKLFWDTCMAGGYP 131
           EMEDKLFWDTCM GGYP
Sbjct: 121 EMEDKLFWDTCMEGGYP 131

BLAST of CcUC06G114880 vs. NCBI nr
Match: KAE8646684.1 (hypothetical protein Csa_005604 [Cucumis sativus])

HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 87/123 (70.73%), Postives = 94/123 (76.42%), Query Frame = 0

Query: 16  SADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDLRSLDFQDDGDG-NGD 75
           SADSEVD+LLSH PH+LESAV   DDQEDACSCSC  NDF+ D     DFQD  DG NGD
Sbjct: 31  SADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSID-----DFQDAYDGDNGD 90

Query: 76  GDRDQAAIGLIGDGERRRSGTTLEYSYKEEEEESS-NDVGVIHNTDEMEDKLFWDTCMAG 131
           GD+D   IGLIGDG RRRSG   E   +EEEEESS NDVG I N +EMEDK+FWDTCMAG
Sbjct: 91  GDQD---IGLIGDGGRRRSGAGYEEEEEEEEEESSNNDVGAIRNMNEMEDKVFWDTCMAG 145

BLAST of CcUC06G114880 vs. NCBI nr
Match: KDO74975.1 (hypothetical protein CISIN_1g032474mg [Citrus sinensis])

HSP 1 Score: 68.6 bits (166), Expect = 4.7e-08
Identity = 54/142 (38.03%), Postives = 73/142 (51.41%), Query Frame = 0

Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             +L+
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYS--YKEEEEESSNDVGVIHN-- 125
           + +F DDGDG+      Q             S   + ++    +EEE SS D+G+ +N  
Sbjct: 68  NEEFDDDGDGSSTDQHRQI---------NWSSSCKIWWADGADDEEEYSSWDIGINNNIS 127

Query: 126 ---TDEMEDKLFWDTCMAGGYP 131
               DEMED+LFW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

BLAST of CcUC06G114880 vs. NCBI nr
Match: GAY36063.1 (hypothetical protein CUMW_020050 [Citrus unshiu])

HSP 1 Score: 65.9 bits (159), Expect = 3.0e-07
Identity = 54/143 (37.76%), Postives = 72/143 (50.35%), Query Frame = 0

Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             D +
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67

Query: 66  SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEY---SYKEEEEESSNDVGVIHN- 125
           + +  DDGDG+      Q   G          G+   +   +  +EEE SS D+G+ +N 
Sbjct: 68  NEESNDDGDGSSTDQHRQINWG----------GSCKIWWADAADDEEEYSSWDIGINNNI 127

Query: 126 ----TDEMEDKLFWDTCMAGGYP 131
                DEMED+LFW+TCMA GYP
Sbjct: 128 SRKVKDEMEDRLFWETCMAFGYP 140

BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match: A0A5A7SSL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001140 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.2e-47
Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 0

Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRS 60
           MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV  DDQEDACSCSC  NDF+ DDLR+
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60

Query: 61  LDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYSY----KEEEEESSNDVGVIHNT 120
           LDFQDDGD NGD D DQ  I LIGDG RRRSG  L+Y Y    +EEEEESS+DVGVI N 
Sbjct: 61  LDFQDDGD-NGDRDLDQ-DICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNM 120

Query: 121 DEMEDKLFWDTCMAGGYP 131
           +EMEDKLFWDTCMAGGYP
Sbjct: 121 NEMEDKLFWDTCMAGGYP 136

BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match: A0A0A0KBF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 4.2e-39
Identity = 102/138 (73.91%), Postives = 109/138 (78.99%), Query Frame = 0

Query: 1   MDQIKDASSFFLWEDSADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDL 60
           MDQIKDASSFFLWEDSADSEVD+LLSH PH+LESAV   DDQEDACSCSC  NDF+ D  
Sbjct: 1   MDQIKDASSFFLWEDSADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSID-- 60

Query: 61  RSLDFQDDGDG-NGDGDRDQAAIGLIGDGERRRSGTTLEYSYKEEEEESS-NDVGVIHNT 120
              DFQD  DG NGDGD+D   IGLIGDG RRRSG   E   +EEEEESS NDVG I N 
Sbjct: 61  ---DFQDAYDGDNGDGDQD---IGLIGDGGRRRSGAGYEEEEEEEEEESSNNDVGAIRNM 120

Query: 121 DEMEDKLFWDTCMAGGYP 131
           +EMEDK+FWDTCMAGGYP
Sbjct: 121 NEMEDKVFWDTCMAGGYP 130

BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match: A0A067G8N3 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.3e-08
Identity = 54/142 (38.03%), Postives = 73/142 (51.41%), Query Frame = 0

Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             +L+
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67

Query: 66  SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYS--YKEEEEESSNDVGVIHN-- 125
           + +F DDGDG+      Q             S   + ++    +EEE SS D+G+ +N  
Sbjct: 68  NEEFDDDGDGSSTDQHRQI---------NWSSSCKIWWADGADDEEEYSSWDIGINNNIS 127

Query: 126 ---TDEMEDKLFWDTCMAGGYP 131
               DEMED+LFW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140

BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match: A0A2H5N748 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07
Identity = 54/143 (37.76%), Postives = 72/143 (50.35%), Query Frame = 0

Query: 6   DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
           D SSF L E+SADSEVD L       +   A  D++DA SCSC+             D +
Sbjct: 8   DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67

Query: 66  SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEY---SYKEEEEESSNDVGVIHN- 125
           + +  DDGDG+      Q   G          G+   +   +  +EEE SS D+G+ +N 
Sbjct: 68  NEESNDDGDGSSTDQHRQINWG----------GSCKIWWADAADDEEEYSSWDIGINNNI 127

Query: 126 ----TDEMEDKLFWDTCMAGGYP 131
                DEMED+LFW+TCMA GYP
Sbjct: 128 SRKVKDEMEDRLFWETCMAFGYP 140

BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match: A0A2N9EJU4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2920 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 8.0e-06
Identity = 51/135 (37.78%), Postives = 68/135 (50.37%), Query Frame = 0

Query: 6   DASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCN-------DFATDDLRSLD 65
           D SS  L+ED+ADSE D  + H  ++ + + D +DA SCSC+        F    +   D
Sbjct: 11  DVSSSLLFEDTADSETDAEI-HADDVATDIFDDQDAESCSCDTCDDDKLGFTDHQVLDCD 70

Query: 66  FQDDGDGNG--DGDRDQAAIGLIGDGERRRSGTTLE-YSYKEEEEESSNDVGVIHNTDEM 125
            QD G+ +G   GD D       G  +   S       S KE EEE+  D     + DEM
Sbjct: 71  DQDSGNSSGINHGDDDHHEPSTSGCNQLWLSDENSGCLSRKEGEEETKVDK---IDVDEM 130

Query: 126 EDKLFWDTCMAGGYP 131
           ED+LFW+TCM  GYP
Sbjct: 131 EDRLFWETCMEVGYP 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0033453.16.7e-4779.71hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa][more]
KAG6575041.11.4e-3362.77hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAE8646684.11.7e-2970.73hypothetical protein Csa_005604 [Cucumis sativus][more]
KDO74975.14.7e-0838.03hypothetical protein CISIN_1g032474mg [Citrus sinensis][more]
GAY36063.13.0e-0737.76hypothetical protein CUMW_020050 [Citrus unshiu][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SSL93.2e-4779.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0KBF34.2e-3973.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1[more]
A0A067G8N32.3e-0838.03Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1[more]
A0A2H5N7481.5e-0737.76Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1[more]
A0A2N9EJU48.0e-0637.78Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2920 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..109
NoneNo IPR availablePANTHERPTHR35726GLUTAMIC ACID-RICH PROTEIN-LIKEcoord: 2..130
NoneNo IPR availablePANTHERPTHR35726:SF5SUBFAMILY NOT NAMEDcoord: 2..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G114880.1CcUC06G114880.1mRNA