Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGGAATGGTGATGGTGATCGAGATCAAGCTGCCATTGGATTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACTACGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGTCGAGTAATGATGTGGGTGTAATTCATAATACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGCATGGCAGGTGGGTATCCCTGA
mRNA sequence
ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGGAATGGTGATGGTGATCGAGATCAAGCTGCCATTGGATTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACTACGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGTCGAGTAATGATGTGGGTGTAATTCATAATACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGCATGGCAGGTGGGTATCCCTGA
Coding sequence (CDS)
ATGGACCAAATCAAAGATGCTTCTTCTTTCTTTCTATGGGAAGATAGTGCAGATTCTGAGGTAGATAGATTATTATCTCATCCTCATGAATTAGAATCTGCTGTGGATGATCAGGAGGATGCTTGCTCCTGCAGCTGCAATGATTTTGCTACTGATGATCTTAGATCCCTTGATTTCCAAGATGATGGGGATGGGAATGGTGATGGTGATCGAGATCAAGCTGCCATTGGATTGATCGGTGATGGTGAAAGGCGGCGGAGCGGGACTACGTTGGAGTATAGTTACAAGGAGGAAGAAGAGGAGTCGAGTAATGATGTGGGTGTAATTCATAATACGGATGAAATGGAAGACAAGCTCTTTTGGGACACGTGCATGGCAGGTGGGTATCCCTGA
Protein sequence
MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYSYKEEEEESSNDVGVIHNTDEMEDKLFWDTCMAGGYP
Homology
BLAST of CcUC06G114880 vs. NCBI nr
Match:
KAA0033453.1 (hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa])
HSP 1 Score: 197.6 bits (501), Expect = 6.7e-47
Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 1 MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRS 60
MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV DDQEDACSCSC NDF+ DDLR+
Sbjct: 1 MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60
Query: 61 LDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYSY----KEEEEESSNDVGVIHNT 120
LDFQDDGD NGD D DQ I LIGDG RRRSG L+Y Y +EEEEESS+DVGVI N
Sbjct: 61 LDFQDDGD-NGDRDLDQ-DICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNM 120
Query: 121 DEMEDKLFWDTCMAGGYP 131
+EMEDKLFWDTCMAGGYP
Sbjct: 121 NEMEDKLFWDTCMAGGYP 136
BLAST of CcUC06G114880 vs. NCBI nr
Match:
KAG6575041.1 (hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 153.3 bits (386), Expect = 1.4e-33
Identity = 86/137 (62.77%), Postives = 101/137 (73.72%), Query Frame = 0
Query: 4 IKDASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCNDFATDDLRSLDFQDDG 63
+ +ASS FLWED+ADSEVDRLLSHPH+LESAVDD EDA SCSC+D+AT D ++D QDDG
Sbjct: 1 MNNASSLFLWEDTADSEVDRLLSHPHQLESAVDDPEDARSCSCDDYAT-DRSAVDLQDDG 60
Query: 64 DGNGDGDRDQAAIGLIGD-------GERRRSGTTLEYSY---KEEEEESSNDVGVIHNTD 123
DG+ D A+G GD E R SG TLEYS +EEEEES+N+VG I + +
Sbjct: 61 DGDED-----RAVGSTGDDARSSHLDETRPSGATLEYSSEEDEEEEEESNNNVGAIRDMN 120
Query: 124 EMEDKLFWDTCMAGGYP 131
EMEDKLFWDTCM GGYP
Sbjct: 121 EMEDKLFWDTCMEGGYP 131
BLAST of CcUC06G114880 vs. NCBI nr
Match:
KAE8646684.1 (hypothetical protein Csa_005604 [Cucumis sativus])
HSP 1 Score: 139.8 bits (351), Expect = 1.7e-29
Identity = 87/123 (70.73%), Postives = 94/123 (76.42%), Query Frame = 0
Query: 16 SADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDLRSLDFQDDGDG-NGD 75
SADSEVD+LLSH PH+LESAV DDQEDACSCSC NDF+ D DFQD DG NGD
Sbjct: 31 SADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSID-----DFQDAYDGDNGD 90
Query: 76 GDRDQAAIGLIGDGERRRSGTTLEYSYKEEEEESS-NDVGVIHNTDEMEDKLFWDTCMAG 131
GD+D IGLIGDG RRRSG E +EEEEESS NDVG I N +EMEDK+FWDTCMAG
Sbjct: 91 GDQD---IGLIGDGGRRRSGAGYEEEEEEEEEESSNNDVGAIRNMNEMEDKVFWDTCMAG 145
BLAST of CcUC06G114880 vs. NCBI nr
Match:
KDO74975.1 (hypothetical protein CISIN_1g032474mg [Citrus sinensis])
HSP 1 Score: 68.6 bits (166), Expect = 4.7e-08
Identity = 54/142 (38.03%), Postives = 73/142 (51.41%), Query Frame = 0
Query: 6 DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
D SSF L E+SADSEVD L + A D++DA SCSC+ +L+
Sbjct: 8 DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67
Query: 66 SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYS--YKEEEEESSNDVGVIHN-- 125
+ +F DDGDG+ Q S + ++ +EEE SS D+G+ +N
Sbjct: 68 NEEFDDDGDGSSTDQHRQI---------NWSSSCKIWWADGADDEEEYSSWDIGINNNIS 127
Query: 126 ---TDEMEDKLFWDTCMAGGYP 131
DEMED+LFW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140
BLAST of CcUC06G114880 vs. NCBI nr
Match:
GAY36063.1 (hypothetical protein CUMW_020050 [Citrus unshiu])
HSP 1 Score: 65.9 bits (159), Expect = 3.0e-07
Identity = 54/143 (37.76%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 6 DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
D SSF L E+SADSEVD L + A D++DA SCSC+ D +
Sbjct: 8 DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67
Query: 66 SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEY---SYKEEEEESSNDVGVIHN- 125
+ + DDGDG+ Q G G+ + + +EEE SS D+G+ +N
Sbjct: 68 NEESNDDGDGSSTDQHRQINWG----------GSCKIWWADAADDEEEYSSWDIGINNNI 127
Query: 126 ----TDEMEDKLFWDTCMAGGYP 131
DEMED+LFW+TCMA GYP
Sbjct: 128 SRKVKDEMEDRLFWETCMAFGYP 140
BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match:
A0A5A7SSL9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001140 PE=4 SV=1)
HSP 1 Score: 197.6 bits (501), Expect = 3.2e-47
Identity = 110/138 (79.71%), Postives = 117/138 (84.78%), Query Frame = 0
Query: 1 MDQIKDASSFFLWEDSADSEVDRLLSHPHELESAV--DDQEDACSCSC--NDFATDDLRS 60
MDQIKDASSFFLWEDSADSEVD+LLSHPHELESAV DDQEDACSCSC NDF+ DDLR+
Sbjct: 1 MDQIKDASSFFLWEDSADSEVDKLLSHPHELESAVDDDDQEDACSCSCNNNDFSIDDLRA 60
Query: 61 LDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYSY----KEEEEESSNDVGVIHNT 120
LDFQDDGD NGD D DQ I LIGDG RRRSG L+Y Y +EEEEESS+DVGVI N
Sbjct: 61 LDFQDDGD-NGDRDLDQ-DICLIGDGGRRRSGAALKYGYEEEEEEEEEESSDDVGVIRNM 120
Query: 121 DEMEDKLFWDTCMAGGYP 131
+EMEDKLFWDTCMAGGYP
Sbjct: 121 NEMEDKLFWDTCMAGGYP 136
BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match:
A0A0A0KBF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1)
HSP 1 Score: 170.6 bits (431), Expect = 4.2e-39
Identity = 102/138 (73.91%), Postives = 109/138 (78.99%), Query Frame = 0
Query: 1 MDQIKDASSFFLWEDSADSEVDRLLSH-PHELESAV---DDQEDACSCSC--NDFATDDL 60
MDQIKDASSFFLWEDSADSEVD+LLSH PH+LESAV DDQEDACSCSC NDF+ D
Sbjct: 1 MDQIKDASSFFLWEDSADSEVDKLLSHPPHQLESAVDDADDQEDACSCSCNNNDFSID-- 60
Query: 61 RSLDFQDDGDG-NGDGDRDQAAIGLIGDGERRRSGTTLEYSYKEEEEESS-NDVGVIHNT 120
DFQD DG NGDGD+D IGLIGDG RRRSG E +EEEEESS NDVG I N
Sbjct: 61 ---DFQDAYDGDNGDGDQD---IGLIGDGGRRRSGAGYEEEEEEEEEESSNNDVGAIRNM 120
Query: 121 DEMEDKLFWDTCMAGGYP 131
+EMEDK+FWDTCMAGGYP
Sbjct: 121 NEMEDKVFWDTCMAGGYP 130
BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match:
A0A067G8N3 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 2.3e-08
Identity = 54/142 (38.03%), Postives = 73/142 (51.41%), Query Frame = 0
Query: 6 DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
D SSF L E+SADSEVD L + A D++DA SCSC+ +L+
Sbjct: 8 DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHELK 67
Query: 66 SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEYS--YKEEEEESSNDVGVIHN-- 125
+ +F DDGDG+ Q S + ++ +EEE SS D+G+ +N
Sbjct: 68 NEEFDDDGDGSSTDQHRQI---------NWSSSCKIWWADGADDEEEYSSWDIGINNNIS 127
Query: 126 ---TDEMEDKLFWDTCMAGGYP 131
DEMED+LFW+TCMA GYP
Sbjct: 128 RKVKDEMEDRLFWETCMAFGYP 140
BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match:
A0A2H5N748 (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1)
HSP 1 Score: 65.9 bits (159), Expect = 1.5e-07
Identity = 54/143 (37.76%), Postives = 72/143 (50.35%), Query Frame = 0
Query: 6 DASSFFLWEDSADSEVDRLLSHP--HELESAVDDQEDACSCSCNDFATD--------DLR 65
D SSF L E+SADSEVD L + A D++DA SCSC+ D +
Sbjct: 8 DVSSFVLVEESADSEVDSLTCEMCLRDAVMATGDEDDAESCSCDTIEMQAEGLDYDHDHK 67
Query: 66 SLDFQDDGDGNGDGDRDQAAIGLIGDGERRRSGTTLEY---SYKEEEEESSNDVGVIHN- 125
+ + DDGDG+ Q G G+ + + +EEE SS D+G+ +N
Sbjct: 68 NEESNDDGDGSSTDQHRQINWG----------GSCKIWWADAADDEEEYSSWDIGINNNI 127
Query: 126 ----TDEMEDKLFWDTCMAGGYP 131
DEMED+LFW+TCMA GYP
Sbjct: 128 SRKVKDEMEDRLFWETCMAFGYP 140
BLAST of CcUC06G114880 vs. ExPASy TrEMBL
Match:
A0A2N9EJU4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2920 PE=4 SV=1)
HSP 1 Score: 60.1 bits (144), Expect = 8.0e-06
Identity = 51/135 (37.78%), Postives = 68/135 (50.37%), Query Frame = 0
Query: 6 DASSFFLWEDSADSEVDRLLSHPHELESAVDDQEDACSCSCN-------DFATDDLRSLD 65
D SS L+ED+ADSE D + H ++ + + D +DA SCSC+ F + D
Sbjct: 11 DVSSSLLFEDTADSETDAEI-HADDVATDIFDDQDAESCSCDTCDDDKLGFTDHQVLDCD 70
Query: 66 FQDDGDGNG--DGDRDQAAIGLIGDGERRRSGTTLE-YSYKEEEEESSNDVGVIHNTDEM 125
QD G+ +G GD D G + S S KE EEE+ D + DEM
Sbjct: 71 DQDSGNSSGINHGDDDHHEPSTSGCNQLWLSDENSGCLSRKEGEEETKVDK---IDVDEM 130
Query: 126 EDKLFWDTCMAGGYP 131
ED+LFW+TCM GYP
Sbjct: 131 EDRLFWETCMEVGYP 141
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0033453.1 | 6.7e-47 | 79.71 | hypothetical protein E6C27_scaffold111G001140 [Cucumis melo var. makuwa] | [more] |
KAG6575041.1 | 1.4e-33 | 62.77 | hypothetical protein SDJN03_25680, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAE8646684.1 | 1.7e-29 | 70.73 | hypothetical protein Csa_005604 [Cucumis sativus] | [more] |
KDO74975.1 | 4.7e-08 | 38.03 | hypothetical protein CISIN_1g032474mg [Citrus sinensis] | [more] |
GAY36063.1 | 3.0e-07 | 37.76 | hypothetical protein CUMW_020050 [Citrus unshiu] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7SSL9 | 3.2e-47 | 79.71 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A0A0KBF3 | 4.2e-39 | 73.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067420 PE=4 SV=1 | [more] |
A0A067G8N3 | 2.3e-08 | 38.03 | Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032474mg PE=4 SV=1 | [more] |
A0A2H5N748 | 1.5e-07 | 37.76 | Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_020050 PE=4 SV=1 | [more] |
A0A2N9EJU4 | 8.0e-06 | 37.78 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2920 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |