CcUC06G114640 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G114640
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 5833769 .. 5841444 (+)
RNA-Seq ExpressionCcUC06G114640
SyntenyCcUC06G114640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTGTAAGAAAAATTCGGTGTAAAATAAGGCACCTTTGAGTTGTTTATCCAAAATCACAAGTAGAGGTGTGCAGTCGTCAATCGAAACCGGTTTTTCGATCATCCCACTATCGAACCGACTATGGTTGTTTTAGTAAATGTTCAAACCAACTTCAACCGTCGAGTGCAAACCAACCTTCAATCAGTTGGTTTGATTCTTTATGTTTTTTTTTTTTTAAATATCGGTTTAGATTTTTCCCAAACCAATGCTGACCGAGTCTCTCCTATTCTCCGACCGACCGCCCGACCGCCTTCAATGCGATTGCGCTTTGATTTTAGTCTGTCAGCTCGATTTTTCGGTCTATCATGCTCACCCCTAAACACAAGTTTATCAACACCCATAACATAAAGTCAATTGGTCTAAAAACAAACTCCAGCCCAAATTTCAACCTTTTGTGAGAAAAAAATCAAAGAAACAAACAAAAGAACAAAGTGCTTCAGAATAACTTGTGTATATTACTGTGATTACTGGATAAATACTTCATTATGGTTGCCAAATGAATAGAAAGTTGTTATTTGAACACTTGAAAATGTGGTTGGCCTAAAAGGCTGCAACCTTTTTTTTTCACTAGAGCTCCAATTTTAGGAGCTAAGATATGAAGCCTTTACATGACCCTAAGGAGGGTGGAAAAAAGGAAAAAGAAAAAAAAGAAAATTCCTCAGCTCAAAAATAATTAAAACTTACATCTTGAATTTCCTAATTGATCTCGCTTTGTACAGAAGTATTGGTAAGTAACGAACTGTGTAACAAATCATCAGGTTGAAGTTTCAGTGAGGAGTCCCTTGGCTTTCTCAAACTGATCATCTCAAGGAAGAATAATCCAGGGAAAGAAAAAAAAAAAAAAAAGAGAACTATTTACATGTTTGACCTAATCTCTACCACTGCAAAAACCCGAGTGAGTTATCGTCTGCGTAGCAACTTGAACCAACTGTACGAGTTCCCCTACATCTTGGAAGCTGAAATCAATCACTTTTTTAACTGATGCAACATAGTCCACATGCTTTCCTTCACTAGCACATGAACTAGCTGCCACAAATGCGTTTCGTGAATTCTTCGAGGCCTCCATGGCTGAATTCATATCACGCACCTGGAACATTAAAACATTCGACATGTTCACATTCAAGATTTATATTTATAAAAAGAAATAGCCATTGAGAACAGCAGTATAAACTTCTGGTGAATCTGATCTAACAAAATTATTTGAGTTCTAGTAGAAATGGGAACTTACGAAATTGAGGACCCGACCAAAACTTGTGCAGGTTCCAGCATTCCAGATGTGATTTCGAACACCATGGGAACTACCTTTCTCGAAAGTAGCCTTATCCATAGCTCCATGATTGCTTAAGTTATCGACATCTGATGCAGAAGAAGATGGAGACTCACCTAAAGAAAGAATTCATTGAAAGAGCATCACAATATTAATTAATTGAGAGTGAACAGTTGCAATAAAACAATCAATCCATTTGTCTCCTATAAATATCATAATATCTTTTTCCCATTACCTTGCACAATTGTCCGAAACAACGATTGCATCTCGAGGCGATCTCCACTGATGCTTGAATGTTTATGGTAAACTATCCTCAAGTAAGCTACTTCGATACATTTATAAGCCAAAGATGCTGCAGCCATTTCTCGGCGACTTTCATACTCCATGGCACAGGACCTGTGAATGATTGGAGATGACGGGGTTAAAATAAGATTTTAGTCATCAACATGAAACACACTTGAACACATCTATGTCCATAAAACAAAAGATAAAAAAGAAACTCATCGCAAAGATTTCAAGGTTGAACTGGGGAATGACGAACACTATCCTAGATATTCTAAAATATATGTTCAAACCAAAAAGTAGGGGACTTTCATCAGAGGGAGTCTAAAAAGTTTTGATGAAGTATTGGCATGGTTTATTTTAAGGTGCCACAGTCAAAGGTCGAGCTGAAGTAGGTGACGGTTGCAGGATATAATTTCAGCTACAAAATAACGTTTCATTTACAACAGTTGGCATGGGTCAGATTGACTTATCAGTTAGCATCATTTAAAATGGTTGCAAGAACAACGACACCATAAAGCAAACATGAGCTAGCCAATTGGAAAGGCAAAATTAAAAATGAAAGGCCTCGTGATTAAAGACCAACCCTTGGAAAAGTAAAGTTTCAAACAGAAAAGAAACGTGAGCTACTAATTACTTGCATTAAAAGGGTTTAAATAGACCCAAAAAAAAAGTGCCAAAATGATTGTTTTTACTTACTTGCACAATTCAGCTGTCATGCTATAGAATCGTATGGGGGAGGTATCACCAGGCTTGCCACTCGTATTATTAAGAGTCTCTAGAAGGAATGCTCCATGTAGATACTTCAGAGCAGATTGGAAGTAAAGCTCATTACTTTCAAAAATGAATCCAGAATTCTACAGAATATATAAGAAAACAATGTAAGAATTGGAAACAGGTCCCATCTTAGCAACAATGTTCAAAGAAAGTTGCAGCAATGAGGGAACCTTAAAGTGGTCTGCTTCATCTCTGAGTTTCTTGGCTTCTTTCAATGTATCACAAGCAGTCTGATTTGAGGACTTCGTTCTGTTGAGATTTGAAGCATTAACATCTCTAGATCCCTGTAGATCAGGTGTTCTCTTTGACTCTACCACATCATCACTGGGGGCATCGGCAATAAACTGATGAGAATCTCCCGCCCTAATAGACACTCGTAAAGGATCACCACCAGGGCGGGATGGTTCTTCTTTGCGTTCACCTCCAGAAGAGCATTTTGATATTCTGTCCCTCTTTTCTACTGTTCTCAGACCACCTTTATCTCCTGCTTCAAAATCCCGATTTCGCTTTGTCTGAAGTCTGACTGCTTTATTTGATTGAAATAAAGCACCTGATCTCCGGTCTTCAGCATCATGACCCTTGAGATTTTGAGGGGTTTCCAATCCTTCAGCACCGACATGAATCTTCTCTTTCTTGCGTTTCTTGTGGCTGGGCTCCATGTTGTCATTATTGCACAACCTAGACTGCTTAACAGTATGTGCATCAGCAGTAACAAAATGGTGTTGAACTGCAGGTGAAGCTTTGATTTTCTTGCTGTTGGTGTTGAGAGCATGAGAGTCAGAGAGAATATTAGAGGTAATCTCCTCTTTTTCTCCTCCAAATTGGTCGAGGCCGGATGACCTCATAGGAGATGATGAAACTGATTCAGCAGGAGATACTTTCACTCCAAATTTGGCTTTTGGTAAATGAGAATGAGAAACATTTGAAGAGCTAGAGTTAGCTGCCACGGAAACTTGTTGAGCAATTAAATTTCTCTTCGGTAACTCCTTACTAACTGATGTTTGTTTAGCAATAATCTTCTTATTTTGCATTTTTGGTTCCCTATCCTTGCTGATTTCTTCCATGCCATCAATGAAATCATTGGACACATCAAGCTTCTTCTTCTTCTTCAACCTTTCACAATTCTCTTCCTTCATAAGCACGGGTTCATGGAATCCACTGTTGGGAGAATTTTGATCGACTTGCCAATCATTCACTTTCCTTTTCTTTGTGCAGGCACTTCTACCACTTAGTTGATTAACAGAGGACCTAACAACAGAGGAGATCTCAGCTGTTCCGCTCCATTTCTTCAATGAAATTTGCATTTTATTTTCCGTGTTCAATTTGTTGTTCTTCTTTAAGCTAATGTCACCCTGCTTCAGCATACCTTCCCCACCTTCCATATTTGTCAAACCAGAATTTGAACTACAACCCAATTTTCCAAGGCCCACATTGAAGTTTTGATGATTATCAACAGAGCGCATGTCTTCAGGTCTCTTGATCTTCCTTTTCAATTGGTCGGAATTAACTGCAGCTGAAGAACGATCAGAAGATCCAATTAATTTTTTTTCAAGAAAAGATCAATCTACTAGACATAATTGAAGATTATTTCTCATGGACAACTAACCTCGCTCAGTGGATTTTTCTTTCAGTTTACCTCTGTTCTTTCCCTCTGCCAAGTTGTTCAGGTCAGTAGAAGTTTGATCCACTGAATTTCTCAACTTATTTGGAGGATTACTCAAGCCATTAAGACTTCTATTTTTCCAAGACTCCAAGTGCTGGTCTTTCAGAGAACTCTTGACATGAGTCTGGCCAATTCTGCTAACTGGATTTTGTATTTCTTTGAAAGTTTCACTCTTTTTTCCATGATTTGAAGTATCAGCTGATATTAGTCCATTGGCATGGTTCTGCAAAGCATTTCCACTCTCAGGCAATGGTAGCTGGTACAAAGCATAAAGCTTTTCTGTTGTCTCCTGCTCACTAATGTCACACCGGTTCATCCCAGGCCTACACAATTGCAACATTAAATTAACTGGCAGGATATCGTGTGCAAAACTCTCACATACGAAAGCACTTCAATAAAAGATTATCAAAATCTAATCAAATTTCTAAAATAGAATCACCATCAACTTAAATTATTCTTTCCTTGTCAGAGAAAAAGCAGCAAACTTACAGCCAATCTAGCATGCTACACAACCACTTATCAGGAAGTTGTTCTGGTTTTGTCCCAAAGGGCAGAAGGCGCCATTGCTGGCAAATGTCACAGCATACCCATTCATCCATAGGAGCCACCGCTGCCGGTTCAACCACATTTGAGGATTTGGACATTCTGATTCCACTGTCATCTAGGCCTTTAACCTTCCGCCAGTCACCAGAAGCCCTCTCAATTGCATCCTTACTTATGCGGGTTTCATCTAACCCCGAGCTGTTAAAAGAATCCACATTGTTTGCTCCTACTTTCTCATTGCTGTGAAGCTTTAACCTGTGCCTTCTATTTTCAGATTCAGGAGTGTCAGAATCAGTGTCCTTTCTACCTCTTGATGGTTCACTTTTAATCTTGAAGCCTTCCTCAAATGAACCAGCTATTTTCCCACAAGTAGTCTGCACCACTTTCAATTTCTTCTCTACAACAATTTCAGGCTTTTCTTTCTTGATTGATGCTTTGTCTTTAACTGTTTCAGGTAGTGTAGCTTTACGAGAAAGCTTCTTCTTTTGTGGGTCTAAGAGAGCACTGGACTTCATACCCTCGGAACCAGGTTTCCATTGCAACTCATTAGACAGGAAACCCTTGCTTTCAAAAGCCTCATTGTCTAACTTTTGATCTACAAGTGTTAGAGTAGTCTTCTCCTGCCGACGAGAAGCATAAACTTCATTCTTATGATTGACCTGCCTTTCTCTATGCACCACCTCCTTTTTCTTCTTCTTAACCAATGTACTGTCATCTTGCTTTAAAGTCGTCTCATTGGCTAGCTTGGCCAAACCATCCTTTTTATTCTCAAGAGAAAGCATAGGTTTGGGTAATGGTAACCGTTTTTCCTTTCTTGACAACCCAAGTAGGCTATCATGAAGAGGTGATATCAATGCTCCATGAGGCACTGGGAAAGAAGTCATTGCCTGTTCAAAGGAGAAGATGGAGAGAGAGCAGGGTAAGCATATAGATGCAGTTTGAAATGAAATTCAGAAAATCAGAAGAACCGACACCTGAATTATCTTAGACGGAGACTCATCAGGTGCGGTTTGAGATATAGGCAGCATCCCTTCACTTAAGTCAGAGCTGTTTTCTGATGATGACAATGGTGAGTCATCAAGTCCTAGGCCACTGTATATTGCTGCATTTTTCAATCCAGTACTGTCAGAACCAACTTTGATTCGAAATTTAAGCAATCCACTATTCATTGGACTGCCTGATCTGCCTGAAGCTTCACCTTTAGAAGGGCAACTATTAGTAACTTTAGTAACCGGCAAGCATGAATCTACTCTCCCAGAGATACTGCCAGAAGTTTCCCTTGTATTATGAGAGGAAACAGTATTACAGACAAAAGCTTCTGGTCTCTTGGGTGGTGGAGCTTTTGGATTCTGAGAAGAACCCTGCATTTACACAGTCATATGGTGATTTGTTGTATCATTTATATATAAGGTGTTACTCCATAATACCTTTTCACACACAATGGCTAAAAAAATCGTAATTTTATATACCTGCAAGGGCACATTAGCTGGAGTTGGTGTTGCATTGCAGTCTCTTTGTTGATTTATATTGTTGGGCACAACCGAAGAAGGGCGTTCATATGTAGGCAAAAATGAGCCATAACCACCAAACTTTGCCCCTAATAACAATTAGAAACCCATGTATGATTATTTCAAAACCACAAGGTTCATGTCAACCTGACATTTTATGGTTTATAAATCCGAAAAGTTGGCAACTCACCCAACTTTTCAGCTGAAACTCCACCTTCAAAGTCTTTTTGGAAGTGACCAAGAAAACGCTCGATTTTCTCGTCCTAAACATATAATAATAGGAAGTCTAGTTAATTCAAATGAGCAAAAAAAATTATAAATATGTACAGTTAGTAAATATACACAAACAAATTAACTTCTTTTTCTGGGTAACTATAGCGTCCCAGCTGACCATAGAAAGTAAAGTGCCAAAGTTCTTCAATGAATATATCCCATGGAAATTATTTAGGGATTATTTAGTGCCAAAATTAATAATTCAACTTCATCAAACCAAATAATCTTTACCAAGCCTCCACCTGTTCTTTCTTTTCAATACATTGTTAAACAGTATCTATAAGTTCAATTTACTTTGTTCCTCATGTTTTCCCCCATCAATCAAACTCCAATATAATGGAAATGTTTTAAACGGCTATTGAGGCTTATGCCTTGAGGCTTGCCTTGAGGCAAGATCTTAACTTTTAGCCTCAAGGACTTACACCTCCTATGGACCACAGGAAGCTAATGCCTCCCATAGAAGAGGCAATGTAATGGCAATGGTTTAGATAGTTACTGAGGCTTACATCCTAAGGCTCGTATTGAGGCAACGTTCTAATGGTTAGCCTCAAAACTCAGGCCTCCTTTGAACCACAAAAAGCTTACACCTCCAATAGAAGAGACTTACGCCCTTGTGGAAACAAACTGAAGTCCCTATGCTTCATGTAATTATTAGAATAATAATATCAATTTACCTCATTCTTCAAAAATACAAAAGTCTAAGGCGTGGCATTTGCCATTGAGACTTTAAAAGGATTACAAAAGATAATAGTAGTGAGGCTAAATAAATCCTTTTAGAACTTTTGTTTAAGTGGCAATTGACAGGGTTGGTTTTTTTATTCCCTTTATGACTACTATGTTAAAGTTTTTAACAATACTTGGCTATACTAATTTAGGATTTGGAATTGTTAAATGATTCTAGTTATGGTTTACGGCTCATACTGCCTCAAGGCTTATCACTTGCCTCTTCAAGACTGCCTTTAGACTTTCAAAACATTGCGTAGTGGTTACAAACCTCAACCAAAAAGCAAAAGAGATTGAGCTTTTGGGAGAAAACCCATTCATTGATATGATGAAATGGACTACATAAACCTTCCAAGTAATCTAGTTCAGATTGATTTTTGTTCACTGGGTCATTCAAGAAACAAGTCACAATCCGGCAATAAATTCTAACACTTAAGAAAAAGGTCTTACAATGTAAGAGAGAGTAATGTCAGGGTCAATATCACCGCCATTATCCTTGTGATAGCAAGAAGCTTCGCCTTCTTCCAAGTCAATGCAATCCCCCATTATCATCGGCTCAACAGAGCCCACCATTAAATGTGAACCCAAAACCCTAG

mRNA sequence

ATGACTTGTGCCACAGTCAAAGGTCGAGCTGAAAATCGTATGGGGGAGGTATCACCAGGCTTGCCACTCGTATTATTAAGAGTCTCTAGAAGGAATGCTCCATGTAGATACTTCAGAGCAGATTGGAACATCATGACCCTTGAGATTTTGAGGGGTTTCCAATCCTTCAGCACCGACATGAATCTTCTCTTTCTTGCGTTTCTTGTGGCTGGGCTCCATGTTGTCATTATTGCACAACCTAGACTGCTTAACAAGGACCTAACAACAGAGGAGATCTCAGCTGTTCCGCTCCATTTCTTCAATGAAATTTGCATTTTATTTTCCGTGTTCAATTTGTTGTTCTTCTTTAAGCTAATGTCACCCTGCTTCAGCATACCTTCCCCACCTTCCATATTTGTCAAACCAGAATTTGAACTACAACCCAATTTTCCAAGGCCCACATTGAAAAGGCGCCATTGCTGGCAAATGTCACAGCATACCCATTCATCCATAGGAGCCACCGCTGCCGGTTCAACCACATTTGAGGATTTGGACATTCTGATTCCACTGTCATCTAGGCCTTTAACCTTCCGCCAGTCACCAGAAGCCCTCTCAATTGCATCCTTACTTATGCGGGGTCAATATCACCGCCATTATCCTTGTGATAGCAAGAAGCTTCGCCTTCTTCCAAGTCAATGCAATCCCCCATTATCATCGGCTCAACAGAGCCCACCATTAAATGTGAACCCAAAACCCTAG

Coding sequence (CDS)

ATGACTTGTGCCACAGTCAAAGGTCGAGCTGAAAATCGTATGGGGGAGGTATCACCAGGCTTGCCACTCGTATTATTAAGAGTCTCTAGAAGGAATGCTCCATGTAGATACTTCAGAGCAGATTGGAACATCATGACCCTTGAGATTTTGAGGGGTTTCCAATCCTTCAGCACCGACATGAATCTTCTCTTTCTTGCGTTTCTTGTGGCTGGGCTCCATGTTGTCATTATTGCACAACCTAGACTGCTTAACAAGGACCTAACAACAGAGGAGATCTCAGCTGTTCCGCTCCATTTCTTCAATGAAATTTGCATTTTATTTTCCGTGTTCAATTTGTTGTTCTTCTTTAAGCTAATGTCACCCTGCTTCAGCATACCTTCCCCACCTTCCATATTTGTCAAACCAGAATTTGAACTACAACCCAATTTTCCAAGGCCCACATTGAAAAGGCGCCATTGCTGGCAAATGTCACAGCATACCCATTCATCCATAGGAGCCACCGCTGCCGGTTCAACCACATTTGAGGATTTGGACATTCTGATTCCACTGTCATCTAGGCCTTTAACCTTCCGCCAGTCACCAGAAGCCCTCTCAATTGCATCCTTACTTATGCGGGGTCAATATCACCGCCATTATCCTTGTGATAGCAAGAAGCTTCGCCTTCTTCCAAGTCAATGCAATCCCCCATTATCATCGGCTCAACAGAGCCCACCATTAAATGTGAACCCAAAACCCTAG

Protein sequence

MTCATVKGRAENRMGEVSPGLPLVLLRVSRRNAPCRYFRADWNIMTLEILRGFQSFSTDMNLLFLAFLVAGLHVVIIAQPRLLNKDLTTEEISAVPLHFFNEICILFSVFNLLFFFKLMSPCFSIPSPPSIFVKPEFELQPNFPRPTLKRRHCWQMSQHTHSSIGATAAGSTTFEDLDILIPLSSRPLTFRQSPEALSIASLLMRGQYHRHYPCDSKKLRLLPSQCNPPLSSAQQSPPLNVNPKP
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..245

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G114640.1CcUC06G114640.1mRNA