CcUC06G114510 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G114510
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein RALF-like 33
Location	CicolChr06: 5714991 .. 5715374 (-)
RNA-Seq Expression	CcUC06G114510
Synteny	CcUC06G114510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGCCTTCGCCATTTTCGCCGCTTATTTTCTTATCTCATCAGCGACAGCCGTCGATTTCTCCGGCGACCACAACCTTCTCTTCGTTCCGACCAAATCCGAGTGCCGAGGCTCAATGGCCGAGTGTTTTCTCGCCGGAAACGACGACGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTCTGGCGACGACTCGTTACATAAGCTACGGTGCTCTGAGGAGCAACACCGTTCCTTGCTCTCGCCGCGGCGCTTCTTATTACAACTGCAGACCAGGCGCTCAGGCGAATCCTTACTCCCGTGGTTGCAGCGCCATTACTCGCTGCCGAAGTTAA

mRNA sequence

ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGCCTTCGCCATTTTCGCCGCTTATTTTCTTATCTCATCAGCGACAGCCGTCGATTTCTCCGGCGACCACAACCTTCTCTTCGTTCCGACCAAATCCGAGTGCCGAGGCTCAATGGCCGAGTGTTTTCTCGCCGGAAACGACGACGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTCTGGCGACGACTCGTTACATAAGCTACGGTGCTCTGAGGAGCAACACCGTTCCTTGCTCTCGCCGCGGCGCTTCTTATTACAACTGCAGACCAGGCGCTCAGGCGAATCCTTACTCCCGTGGTTGCAGCGCCATTACTCGCTGCCGAAGTTAA

Coding sequence (CDS)

ATGGGAATCTCACGCGTTTCTTCTCTCCTTGCCGCCTTCGCCATTTTCGCCGCTTATTTTCTTATCTCATCAGCGACAGCCGTCGATTTCTCCGGCGACCACAACCTTCTCTTCGTTCCGACCAAATCCGAGTGCCGAGGCTCAATGGCCGAGTGTTTTCTCGCCGGAAACGACGACGATTCCGCCTTCGGAATGGAGTTCGAGATGGACTCTGAGATCAATCGCCGAATTCTGGCGACGACTCGTTACATAAGCTACGGTGCTCTGAGGAGCAACACCGTTCCTTGCTCTCGCCGCGGCGCTTCTTATTACAACTGCAGACCAGGCGCTCAGGCGAATCCTTACTCCCGTGGTTGCAGCGCCATTACTCGCTGCCGAAGTTAA

Protein sequence

MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDDSAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS

Homology

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BLAST of CcUC06G114510 vs. NCBI nr
Match: XP_038875155.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 233.0 bits (593), Expect = 1.4e-57
Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           MGISRVSSLLAA AI AA+FLISSATAVDFSGDH LLFVPTKSECRGS+AECFLAGNDDD
Sbjct: 1   MGISRVSSLLAAVAILAAHFLISSATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           SAFGMEF MDSEINRRILATTRYISYGALR N VPCSRRGASYYNCRPGAQANPY+RGC+
Sbjct: 61  SAFGMEFVMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCN 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

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BLAST of CcUC06G114510 vs. NCBI nr
Match: KAG6575064.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.0 bits (580), Expect = 4.5e-56
Identity = 111/127 (87.40%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           MGISRVS+L+AAFA+ AA+FLI SATA+DFSGD+ +LF PTKSECRGS+AECFLAGNDDD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           S FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRGASYYNCRPGAQANPY+RGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

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BLAST of CcUC06G114510 vs. NCBI nr
Match: XP_023547686.1 (protein RALF-like 33 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55
Identity = 110/127 (86.61%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           MGISRVS+L+AAF + AA+FLISSATA+DFSGD+ +LF PTKSECRGS+AECFLAGN+DD
Sbjct: 1   MGISRVSALIAAFVVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNNDD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           S FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRGASYYNCRPGAQANPY+RGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of CcUC06G114510 vs. NCBI nr
Match: XP_022959207.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 226.1 bits (575), Expect = 1.7e-55
Identity = 110/127 (86.61%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           MGISRVS+L+AAFA+ AA+FLI SA A+DFSGD+ +LF PTKSECRGS+AECFLAGNDDD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           S FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRGASYYNCRPGAQANPY+RGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of CcUC06G114510 vs. NCBI nr
Match: XP_023006467.1 (protein RALF-like 33 [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 2.9e-55
Identity = 110/127 (86.61%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           MGISRVS+L+AAFA+ AA+FLISSATA+DFSGD+ +LF PTKSECRGS+ ECFLAGN DD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYDD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           S FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRGASYYNCRPGAQANPY+RGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

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BLAST of CcUC06G114510 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 3.3e-33
Identity = 76/113 (67.26%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 14  AIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDDSAFGMEFEMDSEI 73
           AI   +FL ++ T+   SGD    FVP +S+C G++AEC L+  ++      EFEMDSEI
Sbjct: 14  AILTVHFLFAAVTS-QSSGD----FVPIESKCNGTIAECSLSTAEE------EFEMDSEI 73

Query: 74  NRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR 127
           NRRILATT+YISYGALR NTVPCSRRGASYYNCR GAQANPYSRGCSAITRCR
Sbjct: 74  NRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CcUC06G114510 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 7.3e-33
Identity = 81/138 (58.70%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 2   GISRVSSLLAAFAIFAA-----YFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLA- 61
           G+SR S   A FAI        + +  S+ + +F+GD    F P ++ECRG++AEC ++ 
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRGTIAECSVSA 62

Query: 62  --GNDDD-----SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRP 121
             G+  D        G EFEMDSEINRRILAT RYISYGALR NT+PCSRRGASYYNCR 
Sbjct: 63  ALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR 122

Query: 122 GAQANPYSRGCSAITRCR 127
           GAQANPYSRGCSAITRCR
Sbjct: 123 GAQANPYSRGCSAITRCR 136

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BLAST of CcUC06G114510 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-28
Identity = 70/110 (63.64%), Postives = 82/110 (74.55%), Query Frame = 0


Query: 20  FLISSATAVDFSGDHNLLFVPTKS--ECRGSMAECFLAGNDDDSAFGMEFEMDSEINRRI 79
           F IS A A D SG ++ + +P +S   C+GS+ EC         A   EFE+DSE NRRI
Sbjct: 16  FFISMAAAGD-SGAYDWV-MPARSGGGCKGSIGECI--------AEEEEFELDSESNRRI 75

Query: 80  LATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS 128
           LAT +YISYGAL+ N+VPCSRRGASYYNC+PGAQANPYSRGCSAITRCRS
Sbjct: 76  LATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of CcUC06G114510 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-24
Identity = 65/124 (52.42%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 8   SLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTK----SECRGSMAECFLAGNDDDSAF 67
           +L     I   + + S      F+ D   +   T     S C GS+AEC  A        
Sbjct: 6   TLFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGA-------- 65

Query: 68  GMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAIT 127
             E EMDSEINRRILATT+YISY +L+ N+VPCSRRGASYYNC+ GAQANPYSRGCS I 
Sbjct: 66  -EEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIA 120

[Close]

BLAST of CcUC06G114510 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.2e-24
Identity = 67/123 (54.47%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 11  AAFAIFAAYFLISSATAVDFSGD--HNLLFVPTKSE-----CRGSMAECFLAGNDDDSAF 70
           A +A+ A   ++ S  AV+ +GD   +L FV   S      C GS+AEC         A 
Sbjct: 6   AIYAVIAILAIVIS--AVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECI--------AE 65

Query: 71  GMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAIT 127
             E E DS+I+RRILA  +YISYGA+R N+VPCSRRGASYYNC+ GAQANPYSRGCS IT
Sbjct: 66  EEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTIT 118

[Close]

BLAST of CcUC06G114510 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 8.3e-56
Identity = 110/127 (86.61%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           MGISRVS+L+AAFA+ AA+FLI SA A+DFSGD+ +LF PTKSECRGS+AECFLAGNDDD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           S FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRGASYYNCRPGAQANPY+RGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of CcUC06G114510 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.4e-55
Identity = 110/127 (86.61%), Postives = 119/127 (93.70%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           MGISRVS+L+AAFA+ AA+FLISSATA+DFSGD+ +LF PTKSECRGS+ ECFLAGN DD
Sbjct: 1   MGISRVSALIAAFAVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYDD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           S FGMEFEMDSEINRRILATTRYISYGALR N VPCSRRGASYYNCRPGAQANPY+RGCS
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of CcUC06G114510 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.6e-51
Identity = 107/127 (84.25%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           M ISRVSSLLAAFAIFAA+ L+SSATA DFSGDH LL+VP KSECRGS+AEC LAG  DD
Sbjct: 1   MEISRVSSLLAAFAIFAAHLLLSSATAADFSGDHKLLYVPAKSECRGSIAECLLAG--DD 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           S FG EFEMDSEINRRILAT RYISYGAL+ N+VPCSRRGASYYNC+PGAQANPY+RGCS
Sbjct: 61  SGFGTEFEMDSEINRRILATMRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCS 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 125

[Close]

BLAST of CcUC06G114510 vs. ExPASy TrEMBL
Match: A0A6J1KG89 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.4e-49
Identity = 101/127 (79.53%), Postives = 114/127 (89.76%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           M ISRV S LAA AI AA+FL+SSA  VDFSGD  LLFVP +S+CRGS+AECFLAG+D+D
Sbjct: 1   MEISRVFSFLAASAIIAAHFLLSSAMVVDFSGDDKLLFVPAESKCRGSIAECFLAGDDND 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           SAFGMEFEMDSEINRRILA +RY+SYGAL+ N+VPCSRRGASYYNC+PGAQANPY RGC+
Sbjct: 61  SAFGMEFEMDSEINRRILAASRYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYRRGCN 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of CcUC06G114510 vs. ExPASy TrEMBL
Match: A0A6J1EV64 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 5.7e-49
Identity = 101/127 (79.53%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MGISRVSSLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDD 60
           M ISRV S LAA AI AA+FL+SSA AVDFSG   LLFVP +S+CRGS+AECFLAG+D+D
Sbjct: 1   MEISRVFSFLAASAIIAAHFLLSSAMAVDFSGGDKLLFVPAESKCRGSIAECFLAGDDND 60

Query: 61  SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCS 120
           SAFGMEFEMDSEINRRILA++RY+SYGAL+ N+VPCSRRGASYYNC+PGAQANPY RGC+
Sbjct: 61  SAFGMEFEMDSEINRRILASSRYLSYGALKRNSVPCSRRGASYYNCQPGAQANPYRRGCN 120

Query: 121 AITRCRS 128
           AITRCRS
Sbjct: 121 AITRCRS 127

[Close]

BLAST of CcUC06G114510 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 142.5 bits (358), Expect = 2.3e-34
Identity = 76/113 (67.26%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 14  AIFAAYFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLAGNDDDSAFGMEFEMDSEI 73
           AI   +FL ++ T+   SGD    FVP +S+C G++AEC L+  ++      EFEMDSEI
Sbjct: 14  AILTVHFLFAAVTS-QSSGD----FVPIESKCNGTIAECSLSTAEE------EFEMDSEI 73

Query: 74  NRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAITRCR 127
           NRRILATT+YISYGALR NTVPCSRRGASYYNCR GAQANPYSRGCSAITRCR
Sbjct: 74  NRRILATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of CcUC06G114510 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 141.4 bits (355), Expect = 5.2e-34
Identity = 81/138 (58.70%), Postives = 96/138 (69.57%), Query Frame = 0


Query: 2   GISRVSSLLAAFAIFAA-----YFLISSATAVDFSGDHNLLFVPTKSECRGSMAECFLA- 61
           G+SR S   A FAI        + +  S+ + +F+GD    F P ++ECRG++AEC ++ 
Sbjct: 3   GLSRNSGAAAIFAILLILAVHNWSVAVSSQSTEFAGD----FPPFETECRGTIAECSVSA 62

Query: 62  --GNDDD-----SAFGMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRP 121
             G+  D        G EFEMDSEINRRILAT RYISYGALR NT+PCSRRGASYYNCR 
Sbjct: 63  ALGDGGDLFYGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR 122

Query: 122 GAQANPYSRGCSAITRCR 127
           GAQANPYSRGCSAITRCR
Sbjct: 123 GAQANPYSRGCSAITRCR 136

[Close]

BLAST of CcUC06G114510 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 112.1 bits (279), Expect = 3.4e-25
Identity = 65/124 (52.42%), Postives = 76/124 (61.29%), Query Frame = 0


Query: 8   SLLAAFAIFAAYFLISSATAVDFSGDHNLLFVPTK----SECRGSMAECFLAGNDDDSAF 67
           +L     I   + + S      F+ D   +   T     S C GS+AEC  A        
Sbjct: 6   TLFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGA-------- 65

Query: 68  GMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAIT 127
             E EMDSEINRRILATT+YISY +L+ N+VPCSRRGASYYNC+ GAQANPYSRGCS I 
Sbjct: 66  -EEEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIA 120

[Close]

BLAST of CcUC06G114510 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 111.7 bits (278), Expect = 4.4e-25
Identity = 67/123 (54.47%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 11  AAFAIFAAYFLISSATAVDFSGD--HNLLFVPTKSE-----CRGSMAECFLAGNDDDSAF 70
           A +A+ A   ++ S  AV+ +GD   +L FV   S      C GS+AEC         A 
Sbjct: 6   AIYAVIAILAIVIS--AVESTGDFGDSLDFVRAGSSSLFSGCTGSIAECI--------AE 65

Query: 71  GMEFEMDSEINRRILATTRYISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAIT 127
             E E DS+I+RRILA  +YISYGA+R N+VPCSRRGASYYNC+ GAQANPYSRGCS IT
Sbjct: 66  EEEMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTIT 118

[Close]

BLAST of CcUC06G114510 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 85.1 bits (209), Expect = 4.4e-17
Identity = 41/62 (66.13%), Postives = 47/62 (75.81%), Query Frame = 0


Query: 65  MEFEMDSEINRRILATTR-YISYGALRSNTVPCSRRGASYYNCRPGAQANPYSRGCSAIT 124
           +++ MDSE NRR LA  R YISYGALR N VPCSRRG SYY+C+   +ANPY RGCS IT
Sbjct: 44  LDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVIT 103

Query: 125 RC 126
            C
Sbjct: 104 HC 105

The following BLAST results are available for this feature:

BLAST of CcUC06G114510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875155.1	1.4e-57	92.13	protein RALF-like 33 [Benincasa hispida]	[more]
KAG6575064.1	4.5e-56	87.40	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023547686.1	1.0e-55	86.61	protein RALF-like 33 [Cucurbita pepo subsp. pepo]	[more]
XP_022959207.1	1.7e-55	86.61	protein RALF-like 33 [Cucurbita moschata]	[more]
XP_023006467.1	2.9e-55	86.61	protein RALF-like 33 [Cucurbita maxima]	[more]

BLAST of CcUC06G114510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9P8	3.3e-33	67.26	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9LUS7	7.3e-33	58.70	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q945T0	2.4e-28	63.64	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	4.7e-24	52.42	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9MA62	6.2e-24	54.47	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of CcUC06G114510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3W7	8.3e-56	86.61	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1	[more]
A0A6J1KVY0	1.4e-55	86.61	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1	[more]
A0A6J1C9N4	3.6e-51	84.25	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1	[more]
A0A6J1KG89	3.4e-49	79.53	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111494831 PE=3 SV=1	[more]
A0A6J1EV64	5.7e-49	79.53	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111436882 PE=3 SV=1	[more]

BLAST of CcUC06G114510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15800.1	2.3e-34	67.26	ralf-like 33	[more]
AT3G16570.1	5.2e-34	58.70	rapid alkalinization factor 23	[more]
AT1G02900.1	3.4e-25	52.42	rapid alkalinization factor 1	[more]
AT3G05490.1	4.4e-25	54.47	ralf-like 22	[more]
AT2G33775.1	4.4e-17	66.13	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 66..126 e-value: 9.0E-31 score: 106.6
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 7..127
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 7..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G114510.1	CcUC06G114510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region