CcUC06G114010 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G114010
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Zinc finger CCHC domain-containing protein 10
Location	CicolChr06: 5154678 .. 5156517 (-)
RNA-Seq Expression	CcUC06G114010
Synteny	CcUC06G114010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTAGCTGGAGACCCGACCCAATCGGAATCGGGTTCGTGGAAAACCCGTTTATACGTTCCGTCCTCCTTCATATTTCTTTGCATTCGAGATTGCTCCTCTCTACTTCGCTTACGAACTGGATTCCGTTTCATCTTCGAACCCTAAGAAAGGTACGTTCCAACTGCGATTCCTCTACTTCCAATTGATTTTGAGGGTTTTGATAGCTGCAAGCATTGCGTAATTTCACTCGATCTTTCGGATTTTCCCCTTTTCTTTACGAACCAGATCGGCGTTCTATTTCGATTACGATCTGTTAATCAGAAACATTAGTTTTTTCTTTTTTCCTTTTTTTTTTGTTGTGATTATGTTGTTTTAAGCTATAACTTGATCTGACTTTCGTTTAATTTCCCCGCTTTTGCGGTAATTGATGGAAACCCTAAATTGCTTTTTTCTCTGTTCTTGGTTCTTTTTCTTTGTTTTTTGTACGATTTATCTGCTCGTAATCTGGGGATTCTTTTACTATCCTATTCTTCCAATTTATCTTCCGCCCAGGTATTTATTTATATTCAGATGGTTAGTCACTACATGTTTTATGAGAAGGAAACCTTATAGTTTTCGTTTCGTTGTTCTCTTATTGTCTGTTTGCTCATAATTTGGTATATTCGTCATGATCTTATTCTTCAGTTTCTGATTGTTCCTTGCCATTGTGTTTGATATTGAAAAAACAAAGCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGACAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGACTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCCGATTGGGTGAAAGAAAGGACATTAAGGTCTCCATGTCTAGTGCTGGTGGAGCTGCTGCACAGTGTCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAGAACCCGAAGCTGAGGATGAAGATGGCAGTCTCCTTGGAGTTGGACAACCCAGATTCTGGTGAGGAAAAGAAGGCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGATGAAAAATCCAATAGTGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGTTCATCATCAGTTACTGAATCTGATGATTCTTCTGAAGCAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTCAGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAGGGTCTGAATCAGAGTCTGATTCCGACAATGAACGTAGTAGGAGGAAGAGCCGAAGGCACAGCAGAAAACGCTAGTTAAGGTAATCGCAATTGAGTGAAACAAATTAGAATGGTTGATATATCATTGCAATTGTAGTCAGTTTAGAGATTCGAGTTCATTCAGTTTCTTGTTTAGGGACACTCTGGATAGAGGAATTGTGTGTAACCTGAAGTTTGGTTTTCTTTTCTTCTTCTAATAGTTGAGTTTAGAATCTTGTTCCTTTCCTTTTCTATCTTCTTAGCTCTTATGAATGTATAAATTATTGATGCTTTACTTCTATAATTACTATGTTACGGATGTTGGTTCTTGAATAAACTTGGGTAATGCTGCATTAATAGTGCTGTATTTGTTGTCTTGTCACAACCAATC

mRNA sequence

ACTAGCTGGAGACCCGACCCAATCGGAATCGGGTTCGTGGAAAACCCGTTTATACGTTCCGTCCTCCTTCATATTTCTTTGCATTCGAGATTGCTCCTCTCTACTTCGCTTACGAACTGGATTCCGTTTCATCTTCGAACCCTAAGAAAGATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGACAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGACTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCCGATTGGGTGAAAGAAAGGACATTAAGGTCTCCATGTCTAGTGCTGGTGGAGCTGCTGCACAGTGTCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAGAACCCGAAGCTGAGGATGAAGATGGCAGTCTCCTTGGAGTTGGACAACCCAGATTCTGGTGAGGAAAAGAAGGCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGATGAAAAATCCAATAGTGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGTTCATCATCAGTTACTGAATCTGATGATTCTTCTGAAGCAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTCAGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAGGGTCTGAATCAGAGTCTGATTCCGACAATGAACGTAGTAGGAGGAAGAGCCGAAGGCACAGCAGAAAACGCTAGTTAAGGTAATCGCAATTGAGTGAAACAAATTAGAATGGTTGATATATCATTGCAATTGTAGTCAGTTTAGAGATTCGAGTTCATTCAGTTTCTTGTTTAGGGACACTCTGGATAGAGGAATTGTGTGTAACCTGAAGTTTGGTTTTCTTTTCTTCTTCTAATAGTTGAGTTTAGAATCTTGTTCCTTTCCTTTTCTATCTTCTTAGCTCTTATGAATGTATAAATTATTGATGCTTTACTTCTATAATTACTATGTTACGGATGTTGGTTCTTGAATAAACTTGGGTAATGCTGCATTAATAGTGCTGTATTTGTTGTCTTGTCACAACCAATC

Coding sequence (CDS)

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGACAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGACTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCCGATTGGGTGAAAGAAAGGACATTAAGGTCTCCATGTCTAGTGCTGGTGGAGCTGCTGCACAGTGTCAGAAATGTTATCAGATGGGACACTGGACCTACGAATGCAAAAATGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAGAACCCGAAGCTGAGGATGAAGATGGCAGTCTCCTTGGAGTTGGACAACCCAGATTCTGGTGAGGAAAAGAAGGCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGATGAAAAATCCAATAGTGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGTTCATCATCAGTTACTGAATCTGATGATTCTTCTGAAGCAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTCAGAAAGGAGTCGAAGAAGGAGAAAGAAGCAGAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAGGGTCTGAATCAGAGTCTGATTCCGACAATGAACGTAGTAGGAGGAAGAGCCGAAGGCACAGCAGAAAACGCTAG

Protein sequence

MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKHSKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDNERSRRKSRRHSRKR

Homology

[Close]

BLAST of CcUC06G114010 vs. NCBI nr
Match: XP_011649249.1 (zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_006617 [Cucumis sativus])

HSP 1 Score: 415.6 bits (1067), Expect = 3.2e-112
Identity = 254/264 (96.21%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKHSKKKSKRKHRSDEKSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VSLELDNPD GEEKK KKHSKKKSKRKHRS+ KSNSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSE SSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDSDNERSRRKSRRHSRKR 265
            SESESDSDNERSRRKSRRHSRKR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of CcUC06G114010 vs. NCBI nr
Match: XP_008460988.2 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460989.1 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >KAA0045615.1 zinc finger CCHC domain-containing protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 408.7 bits (1049), Expect = 3.9e-110
Identity = 250/264 (94.70%), Postives = 255/264 (96.59%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKHSKKKSKRKHRSDEKSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VSLELDNPD GEE+K KKHSK KSKRKHRS+ KS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSE SSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDSDNERSRRKSRRHSRKR 265
            SESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of CcUC06G114010 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 399.4 bits (1025), Expect = 2.3e-107
Identity = 250/268 (93.28%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--AKKHSKKKSKRKHRSDEKSNSDSEASV 180
           SRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDSDNERSRRKSRRHSRKR 265
           DSDSGSESESDSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CcUC06G114010 vs. NCBI nr
Match: KAG7013679.1 (Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.4 bits (1017), Expect = 2.0e-106
Identity = 249/268 (92.91%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--AKKHSKKKSKRKHRSDEKSNSDSEASV 180
           SRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDSDNERSRRKSRRHSRKR 265
           DSDS SESESDSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CcUC06G114010 vs. NCBI nr
Match: KAG6575110.1 (Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 395.2 bits (1014), Expect = 4.4e-106
Identity = 248/268 (92.54%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 40  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 99

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKVSMS+AGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 100 EAKRQMYLMSTEKAVRLGERKDIKVSMSTAGGAAAQCQKCYQSGHWTYECKNERVYISRP 159

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--AKKHSKKKSKRKHRSDEKSNSDSEASV 180
           SRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNSDSEASV
Sbjct: 160 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 219

Query: 181 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 220 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 279

Query: 241 DSDSGSESESDSDNERSRRKSRRHSRKR 265
           DSDS SESESDSD+ERSRRKSRRHSRKR
Sbjct: 280 DSDSESESESDSDHERSRRKSRRHSRKR 307

[Close]

BLAST of CcUC06G114010 vs. ExPASy Swiss-Prot
Match: Q5EB97 (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 8.3e-07
Identity = 68/171 (39.77%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKH 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK   L+ K    L+    ++  E+K KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK-ALKEKENRLLQQSMGETNTERKTKKK 81

Query: 156 SKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDD--SSEASSSDYSSSSESESERS 215
            + KS     S + S S+S +    + S SS  +++D   SS +SSS YSSSS S S   
Sbjct: 82  RRPKSVTSTSSSDSSASESSSESETSASSSSEDSDADGSLSSSSSSSAYSSSSSSSS--- 141

Query: 216 RRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDNERSRRKSRRHSRKR 265
                           SSSS SSDSDS S S S S +E S        RK+
Sbjct: 142 ----------------SSSSSSSDSDSSSSSSSSSSSESSSDDEPPKKRKK 172

[Close]

BLAST of CcUC06G114010 vs. ExPASy Swiss-Prot
Match: Q9CX48 (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.4e-06
Identity = 66/164 (40.24%), Postives = 83/164 (50.61%), Query Frame = 0


Query: 96  QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKH 155
           +CQKC + GHWTYECK +R Y+ RPSRT +LK      +  + L+      GE    KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKEKENRLLLQ----SIGETNIEKKI 81

Query: 156 SKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDDSSEASSSDYSSSSESESERSRR 215
            KKK  +   S   S+SDS AS    +S S S T +  SSE S SD S SS S S  S  
Sbjct: 82  KKKKRSKSVTSSSTSSSDSSAS----ESSSESETSASSSSEDSDSDESLSSSSSSSSSSA 141

Query: 216 RRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDNERSRRKSRR 260
                          S S SS S S S SES SD+E  ++K ++
Sbjct: 142 CSSSSSSSSSSSSSDSDSSSSSSSSSSSSESSSDDEPQKKKKKK 177

[Close]

BLAST of CcUC06G114010 vs. ExPASy Swiss-Prot
Match: Q8TBK6 (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.2e-06
Identity = 62/176 (35.23%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 85  VSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNP 144
           + +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK      +  + L+    
Sbjct: 33  IVISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQQSIG 92

Query: 145 DSGEEKKA-KKHSKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDDSSEASSSDYS 204
           ++  E+KA KK SK  +     S + S SDS +   ET + SSS  E  D+ E+SSS  S
Sbjct: 93  ETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSS--EDSDTDESSSSSSS 152

Query: 205 SSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESESDSDNERSRRKSRR 260
           S+S + S  S                S S  SS S S + ++S SD+E  ++K ++
Sbjct: 153 SASSTTSSSSSD--------------SDSDSSSSSSSSTSTDSSSDDEPPKKKKKK 192

[Close]

BLAST of CcUC06G114010 vs. ExPASy TrEMBL
Match: A0A0A0LJ33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.5e-112
Identity = 254/264 (96.21%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKHSKKKSKRKHRSDEKSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VSLELDNPD GEEKK KKHSKKKSKRKHRS+ KSNSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSE SSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDSDNERSRRKSRRHSRKR 265
            SESESDSDNERSRRKSRRHSRKR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of CcUC06G114010 vs. ExPASy TrEMBL
Match: A0A1S3CDQ2 (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.9e-110
Identity = 250/264 (94.70%), Postives = 255/264 (96.59%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKHSKKKSKRKHRSDEKSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VSLELDNPD GEE+K KKHSK KSKRKHRS+ KS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSE SSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDSDNERSRRKSRRHSRKR 265
            SESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of CcUC06G114010 vs. ExPASy TrEMBL
Match: A0A5A7TW64 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001260 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.9e-110
Identity = 250/264 (94.70%), Postives = 255/264 (96.59%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKAKKHSKKKSKRKHRSDEKSNSDSEASVFE 180
           SRTQQLKNPKLRMKM VSLELDNPD GEE+K KKHSK KSKRKHRS+ KS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 181 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240
           TDSGSSSVTESDDSSE SSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 241 GSESESDSDNERSRRKSRRHSRKR 265
            SESESDSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of CcUC06G114010 vs. ExPASy TrEMBL
Match: A0A6J1H6H5 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111460472 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 250/268 (93.28%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--AKKHSKKKSKRKHRSDEKSNSDSEASV 180
           SRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 181 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDSDNERSRRKSRRHSRKR 265
           DSDSGSESESDSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CcUC06G114010 vs. ExPASy TrEMBL
Match: A0A6J1L1Z2 (zinc finger CCHC domain-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111499120 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.7e-106
Identity = 250/268 (93.28%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 121 SRTQQLKNPKLRMKMAVSLELDNPDSG-EEKKAKKHS-KKKSKRKHRSDEKSNSDSEASV 180
           SRTQQLKNPKLRMKMAVSLE+DNPDSG EEKK KK   KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLEMDNPDSGDEEKKTKKRQLKKKSKRKHRSELKSNSDSEASV 180

Query: 181 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 240
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 241 DSDSGSESESDSDNERSRRKSRRHSRKR 265
           DSDS SESESDSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CcUC06G114010 vs. TAIR 10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 265.4 bits (677), Expect = 4.9e-71
Identity = 186/282 (65.96%), Postives = 212/282 (75.18%), Query Frame = 0


Query: 1   MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MS+ K+EKSQ AADRIKAA L+AAKGLSR QAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAG---GAAAQCQKCYQMGHWTYECKNERVYI 120
           E KRQMYLMSTEKAVRLGERKD  +S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 121 SRPSRTQQLKNPKLRMKMAV--------SLELDNPDSGEEKKAKKHSKKKSKRKHRSDEK 180
           SRPSRTQQLKNPKLR K +V          E + PD+   K   +   KKSKRKHRS   
Sbjct: 121 SRPSRTQQLKNPKLRTKPSVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKSD 180

Query: 181 SNSDSEASVFETDSGSSSVTESDDSSEASSSDYSSSSESESERSRRR-------RKKQKR 240
           S SDSEASVFETD        SD SS  SSS+YSSSS+SE ER RRR       ++KQ++
Sbjct: 181 SESDSEASVFETD--------SDGSSGESSSEYSSSSDSEDERRRRRKAKKSKKKQKQRK 240

Query: 241 GRRKRRYSSSSDSSDSDSGSESESDSDNERSRRKSRRHSRKR 265
            RR+R  SSSS+SS+S+S S+S+SD D  R ++KS+RHS KR
Sbjct: 241 ERRRRYSSSSSESSESESASDSDSDEDRSRRKKKSKRHSNKR 274

The following BLAST results are available for this feature:

BLAST of CcUC06G114010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649249.1	3.2e-112	96.21	zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypo...	[more]
XP_008460988.2	3.9e-110	94.70	PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084...	[more]
XP_022959515.1	2.3e-107	93.28	zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]	[more]
KAG7013679.1	2.0e-106	92.91	Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. arg...	[more]
KAG6575110.1	4.4e-106	92.54	Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma s...	[more]

BLAST of CcUC06G114010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5EB97	8.3e-07	39.77	Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z...	[more]
Q9CX48	1.4e-06	40.24	Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1...	[more]
Q8TBK6	9.2e-06	35.23	Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10...	[more]

BLAST of CcUC06G114010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ33	1.5e-112	96.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1	[more]
A0A1S3CDQ2	1.9e-110	94.70	zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TW64	1.9e-110	94.70	Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1H6H5	1.1e-107	93.28	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1L1Z2	3.7e-106	93.28	zinc finger CCHC domain-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CcUC06G114010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49400.1	4.9e-71	65.96	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 92..129 e-value: 2.9E-20 score: 71.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..62
IPR039715	Zinc finger CCHC domain-containing protein 10	PANTHER	PTHR13491	ZCCHC10 PROTEIN	coord: 1..253
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 91..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G114010.1	CcUC06G114010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding