CcUC06G113440 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGTTTTTTGCTTTATAAGCAACTGCATGATTTCGTAGATGCCATCTCTGTCCTCGCCGAGACATTCAATGGCGCACTCGAACTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCATTGCATTTTAGCCCTTCAATTATCCCCTAATTTCTTCGCTGTATATTCTTGCAACAAACTTGAGTATAAACTCGTTTACATACCATACTTTTATGATAGCATGAGCAATCTCCATGGTCTACAAAAATTCGTAGAAAATGGGATTATTGTCTAGTTTATCATAACATTGCATGCTAG ATGTTGAGTTTTTTGCTTTATAAGCAACTGCATGATTTCGTAGATGCCATCTCTGTCCTCGCCGAGACATTCAATGGCGCACTCGAACTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCATTGCATTTTAGCCCTTCAATTATCCCCTAATTTCTTCGCTCATGAGCAATCTCCATGGTCTACAAAAATTCGTAGAAAATGGGATTATTGTCTAGTTTATCATAACATTGCATGCTAG ATGTTGAGTTTTTTGCTTTATAAGCAACTGCATGATTTCGTAGATGCCATCTCTGTCCTCGCCGAGACATTCAATGGCGCACTCGAACTCAAATTCTCACAGTCAAGGTTCTCTATAATGGCGGCTACATCACCTTCGTCTCATTGCATTTTAGCCCTTCAATTATCCCCTAATTTCTTCGCTCATGAGCAATCTCCATGGTCTACAAAAATTCGTAGAAAATGGGATTATTGTCTAGTTTATCATAACATTGCATGCTAG MLSFLLYKQLHDFVDAISVLAETFNGALELKFSQSRFSIMAATSPSSHCILALQLSPNFFAHEQSPWSTKIRRKWDYCLVYHNIAC Homology
BLAST of CcUC06G113440 vs. NCBI nr
Match: XP_023548336.1 (uncharacterized protein LOC111807004 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 73.6 bits (179), Expect = 9.6e-10 Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of CcUC06G113440 vs. NCBI nr
Match: XP_022958855.1 (uncharacterized protein LOC111460009 [Cucurbita moschata]) HSP 1 Score: 73.6 bits (179), Expect = 9.6e-10 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of CcUC06G113440 vs. NCBI nr
Match: XP_023006011.1 (uncharacterized protein LOC111498888 [Cucurbita maxima]) HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of CcUC06G113440 vs. NCBI nr
Match: XP_008458680.1 (PREDICTED: uncharacterized protein LOC103498008 [Cucumis melo]) HSP 1 Score: 63.2 bits (152), Expect = 1.3e-06 Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of CcUC06G113440 vs. NCBI nr
Match: WP_217833378.1 (hypothetical protein, partial [Synechococcus sp. PCC 7002]) HSP 1 Score: 53.9 bits (128), Expect = 7.9e-04 Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of CcUC06G113440 vs. ExPASy TrEMBL
Match: A0A6J1H4N0 (uncharacterized protein LOC111460009 OS=Cucurbita moschata OX=3662 GN=LOC111460009 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.7e-10 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of CcUC06G113440 vs. ExPASy TrEMBL
Match: A0A6J1KWL1 (uncharacterized protein LOC111498888 OS=Cucurbita maxima OX=3661 GN=LOC111498888 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 0
BLAST of CcUC06G113440 vs. ExPASy TrEMBL
Match: A0A1S3C9N3 (uncharacterized protein LOC103498008 OS=Cucumis melo OX=3656 GN=LOC103498008 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.3e-07 Identity = 32/57 (56.14%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of CcUC06G113440 vs. ExPASy TrEMBL
Match: A0A5D3BU35 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00910 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.8e-04 Identity = 34/77 (44.16%), Postives = 44/77 (57.14%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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