Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTCATTGCCCTCCATGACACAACTGACCTTTTGGATGCAATTACTCCATTCACTAAACTTTCAAATAGATTCATTCTAAAATGCTCACCCACCATCTTCTCCTTATCAGCCTCCCTCAAATTCCCTCATCCATTCACTGTACAACTCCAAATCTTGCCTCAATTCTTCTCCTTATTTATCTCCCTAAAACCCCACCATTCCCTCATTTCCCTTTCATATCTCTACAATACTATGTTCCATATGAAACTCTCCCATTTTTCTTCTATGCGCCTCAGTTTTCTACATTTCATTCCATTATATCTTGTAGCTCGTGTTAACCTTTACTTTACAAGTCCCCGTTAGTATATATATACTCCCTCTTTACTTTTCCAAGAATTTCTTTCTTTTCCTTTCAAGAACATTGAAAATCTCATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATTTGTATCAGTTTTAGGTGATGGTTATGTTTTGAATCGTCAATTGAAGATGTTTGTTTCGGGTCACAGCGATGTAAAGCAACAAATTGATTATTCAATTTTTGTTTCAATTGATTCAAATGAATTCAAACGCATTCTAGAGCATAATGTTTTCTTAGGTTGATATATATTTTTTTCTTTAATTCCTTTTCTTGGATTATTCCTTGGAAGAAAATGGTTGCGATTTTCTTTAAATTGATTTTTGTTGCAGTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATTGCAGAGATTATTCTTACCACTGAGGTATGCTCTCTTTCGATTTTCAATAGAAGGTTAATCAGAATATTAAATGAATAATTGAAAAATAAGATTTGTATATAAAAGTATAGAAGTTCATGAATAAAGATTTGTATTTTAAAGTTATCTCAAACTTTTTAACTAATATTTGATAAATGATAGATAATTAATTAGTATATTTGCATTACTATTAGTTTAGTTATTAATTTTAGATTAATTTATGTTTAATTAAGTTGGTGTAATTAATTATTTCGTCTTATAATTTTTTTAAGTGTATAAATAGTCCATTTCAGTATCATATATTTTTCACATAGCAAATTTCTTCGTGGTGGGTTGTAGTTTTTTTCAAGTTTGGAGTTTCTACTTAAATTCTCGCGAATTCTTAATTTTGTTATTTTCATTAAAATTCTCGTGAATTTTTCCTACGTAGATTTTTCATTTTCTAGCCATGGATTTGGTATAATACATTCGTATCAAACACATAGTGAAAAAAAAAAAAAAAATGGTTGGGTGATGTTGTGCAGGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATACCTTTTATTTTGAATTGACAAATTGGTCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATAATCACTGCACCTATTGGATTGTATGTTCAATATTCTATTTATTTTCCGGAATGA
mRNA sequence
ATGTTCTTCATTGCCCTCCATGACACAACTGACCTTTTGGATGCAATTACTCCATTCACTAAACTTTCAAATAGATTCATTCTAAAATGCTCACCCACCATCTTCTCCTTATCAGCCTCCCTCAAATTCCCTCATCCATTCACTGTACAACTCCAAATCTTGCCTCAATTCTTCTCCTTATTTATCTCCCTAAAACCCCACCATTCCCTCATTTCCCTTTCATATCTCTACAATACTATGTTCCATATGAAACTCTCCCATTTTTCTTCTATGCGCCTCAGTTTTCTACATTTCATTCCATTATATCTTGTAGCTCGTGTTAACCTTTACTTTACAAGTCCCCTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATTGCAGAGATTATTCTTACCACTGAGGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATACCTTTTATTTTGAATTGACAAATTGGTCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATAATCACTGCACCTATTGGATTGTATGTTCAATATTCTATTTATTTTCCGGAATGA
Coding sequence (CDS)
ATGTTCTTCATTGCCCTCCATGACACAACTGACCTTTTGGATGCAATTACTCCATTCACTAAACTTTCAAATAGATTCATTCTAAAATGCTCACCCACCATCTTCTCCTTATCAGCCTCCCTCAAATTCCCTCATCCATTCACTGTACAACTCCAAATCTTGCCTCAATTCTTCTCCTTATTTATCTCCCTAAAACCCCACCATTCCCTCATTTCCCTTTCATATCTCTACAATACTATGTTCCATATGAAACTCTCCCATTTTTCTTCTATGCGCCTCAGTTTTCTACATTTCATTCCATTATATCTTGTAGCTCGTGTTAACCTTTACTTTACAAGTCCCCTTCATGTTACTCTCACAAATTCACAAGTCAAATTCTCTGGACCAATTGCAGAGATTATTCTTACCACTGAGGAAAGAAAATGCATAATTGGAGGTCTTGCTGCAGGAGATGAAATTCAATTCCTAATCCCTTTCTCTTTTCATACCTTTTATTTTGAATTGACAAATTGGTCAAAAAGAATTTGGTTATTCAAGTCAACTAATTCCTGGAGCATAATCACTGCACCTATTGGATTGTATGTTCAATATTCTATTTATTTTCCGGAATGA
Protein sequence
MFFIALHDTTDLLDAITPFTKLSNRFILKCSPTIFSLSASLKFPHPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLVARVNLYFTSPLHVTLTNSQVKFSGPIAEIILTTEERKCIIGGLAAGDEIQFLIPFSFHTFYFELTNWSKRIWLFKSTNSWSIITAPIGLYVQYSIYFPE
Homology
BLAST of CcUC06G113310 vs. NCBI nr
Match:
XP_022959393.1 (uncharacterized protein LOC111460379 [Cucurbita moschata])
HSP 1 Score: 104.0 bits (258), Expect = 1.6e-18
Identity = 69/208 (33.17%), Postives = 99/208 (47.60%), Query Frame = 0
Query: 45 HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLV 104
H FT LQILP+FF F S + HHS S+ Y TMFHM+L +SSM FI + +
Sbjct: 11 HRFTAALQILPEFFEYFNSNQTHHSRFSIEKFYLTMFHMELRGYSSML-----FILIQAI 70
Query: 105 ARVNLYFTSP-------------------------------------------------- 164
+++L F +P
Sbjct: 71 NKISLAFENPQSHLEPKVLLRELDASSSEVEQIAQVDYGTFVSIDSQDFKRVVHELNAPS 130
Query: 165 LHVTLTNSQVKFSGPIAEIILTTEERKCIIGGLAAGDEIQFLIPFSFHTFYFELTNWSKR 203
++V+LT SQ+KF P EI+LT ER CI GG+ AG+ +F I F+ +L++ SKR
Sbjct: 131 VNVSLTASQIKFMVPRKEIVLTRRERGCITGGIPAGETFRFSITLHPLLFFHDLSHKSKR 190
BLAST of CcUC06G113310 vs. NCBI nr
Match:
XP_022959354.1 (uncharacterized protein LOC111460352 isoform X1 [Cucurbita moschata])
HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18
Identity = 79/245 (32.24%), Postives = 115/245 (46.94%), Query Frame = 0
Query: 6 LHDTTDLLDAITPFTKLSNRFILKCSPTIFSLSASLKFPHPFTVQLQILPQFFSLFISLK 65
+H DLL+ I N KCS ++ S P P ++LQ +PQFF+ F+ K
Sbjct: 9 VHHFIDLLNFIHGQVNYYNNMDFKCSKAKLTVIVSRPSPTPSIIELQTMPQFFTHFLCNK 68
Query: 66 PHHSLISLSYLYNTMFHMKLSHFSSMRLSFLH--------------------FIPLYL-- 125
P HS +S++ Y+ +F MK + F + +S F+PL L
Sbjct: 69 PFHSSMSVNDYYDILFDMKQTDFDLIAMSHWEGNAYLKFIFSSPSRCDGCEAFLPLLLAH 128
Query: 126 -----------------VARVNLYFT-----SPLHVTLTNSQVKFSGPIAEIILTTEERK 185
+ + L+ T + + VT++NS+ KFSG E L E+++
Sbjct: 129 EEVDVGVINYGIFVSIDLRKFTLFGTFLNDATHVMVTISNSKAKFSGGGEEFTLEQEKKE 188
Query: 186 CIIGGLAAGDEIQFLIPFSFHTFYFELTNWS--KRIWLFKST-NSWSIITAPIGLYVQYS 204
CIIGG+ GDE QF I + F+ L+ WS KR+W FKS N +I PIGLY +Y
Sbjct: 189 CIIGGVEEGDETQFEIITNETEFFNNLSRWSKAKRVWFFKSNDNGHGVIIIPIGLYARYL 248
BLAST of CcUC06G113310 vs. NCBI nr
Match:
XP_023006013.1 (uncharacterized protein LOC111498890 [Cucurbita maxima])
HSP 1 Score: 102.8 bits (255), Expect = 3.5e-18
Identity = 68/208 (32.69%), Postives = 99/208 (47.60%), Query Frame = 0
Query: 45 HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLV 104
H FT LQILP++F F S + HHS S+ Y TMFHM+L +SSM FI + +
Sbjct: 7 HHFTAALQILPEYFEYFNSNQTHHSRFSIEKFYITMFHMELRGYSSML-----FILIQAI 66
Query: 105 ARVNLYFTSP-------------------------------------------------- 164
+++L F +P
Sbjct: 67 NKISLAFENPQSHLEPKVLLRELDASPSEGEQIAQVDYGTFVSIDSQDFKRVVHELNAPS 126
Query: 165 LHVTLTNSQVKFSGPIAEIILTTEERKCIIGGLAAGDEIQFLIPFSFHTFYFELTNWSKR 203
++V+LT SQ+KF P EI+LT ER CI GG+ AG+ +F I F+ +L++ SKR
Sbjct: 127 VNVSLTASQIKFMVPRKEIVLTRRERGCITGGIPAGETFRFSITLHPLLFFHDLSHKSKR 186
BLAST of CcUC06G113310 vs. NCBI nr
Match:
XP_023006012.1 (uncharacterized protein LOC111498889 [Cucurbita maxima])
HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17
Identity = 73/200 (36.50%), Postives = 95/200 (47.50%), Query Frame = 0
Query: 47 FTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSM--------------- 106
F LQILP+FF+ F S +PHHS I L Y M M++ F+SM
Sbjct: 13 FIASLQILPEFFTYFNSDEPHHSTIPLELFYIIMLRMEIRGFTSMYFTLFQPLTKVLLTF 72
Query: 107 ---------RLSFLHFIPLYLVARVNLYF-------------------TSPLHVTLTNSQ 166
L L +PL L ++ + +HV+LTNSQ
Sbjct: 73 QRSSHEPKVMLCELDSLPLELEEMEHIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQ 132
Query: 167 VKFSGPIAEIILTTEERKCIIGGLAAGDEIQFLIPFSFHTFYFELTNWSKRIWLFKSTNS 204
VKFS EI+LT EER+CIIGGLA G E +F I F+ EL+ +KR WLF S N
Sbjct: 133 VKFSASRKEIVLTKEERRCIIGGLAEGKEFEFSITLHPLVFFHELSYKAKRAWLFMSINF 192
BLAST of CcUC06G113310 vs. NCBI nr
Match:
XP_022964070.1 (uncharacterized protein LOC111464207 [Cucurbita moschata])
HSP 1 Score: 100.5 bits (249), Expect = 1.7e-17
Identity = 78/237 (32.91%), Postives = 113/237 (47.68%), Query Frame = 0
Query: 12 LLDAITPFTKLSNRFILKCSPTIFSLSASLKFPHP-FTVQLQILPQFFSLFISLKPHH-S 71
LL A + + + L+ +P + SL +K P P F L + P FF+ F + K HH S
Sbjct: 11 LLKATSTLALIGEKADLRITPIMLSL--EVKHPSPAFNAGLLLSPGFFTFFYTNKIHHYS 70
Query: 72 LISLSYLYNTMFHMKLSHFSSM-------------------------------------- 131
+ISL Y TM M FSSM
Sbjct: 71 IISLELFYITMNIMNARGFSSMLFFLVERSNRLYLRFDHSKIEPKVTSFRELTLNPPEMN 130
Query: 132 ---RLSFLHFIPLYLVARVNL---YFTSPLHVTLTNSQVKFSGPIAEIILTTEERKCIIG 191
RL + F+ + N+ HVTLT+SQVKFS EI+LT +++CIIG
Sbjct: 131 HLARLDYATFVSIDSPTFRNIVTELHADYAHVTLTDSQVKFSNADKEIVLTKRKKQCIIG 190
Query: 192 GLAAGDEIQFLIPFSFHTFYFELTNWSKRIWLFKSTNSWSIITAPIGLYVQYSIYFP 203
++ DEI+F+I F+ +L++ S R+WLFKS+NS S + P+G+Y Q+ +YFP
Sbjct: 191 DVSEKDEIKFVITLQPTMFFHDLSHQSARVWLFKSSNSSSAMIVPVGMYTQFWVYFP 245
BLAST of CcUC06G113310 vs. ExPASy TrEMBL
Match:
A0A6J1H5T5 (uncharacterized protein LOC111460379 OS=Cucurbita moschata OX=3662 GN=LOC111460379 PE=4 SV=1)
HSP 1 Score: 104.0 bits (258), Expect = 7.6e-19
Identity = 69/208 (33.17%), Postives = 99/208 (47.60%), Query Frame = 0
Query: 45 HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLV 104
H FT LQILP+FF F S + HHS S+ Y TMFHM+L +SSM FI + +
Sbjct: 11 HRFTAALQILPEFFEYFNSNQTHHSRFSIEKFYLTMFHMELRGYSSML-----FILIQAI 70
Query: 105 ARVNLYFTSP-------------------------------------------------- 164
+++L F +P
Sbjct: 71 NKISLAFENPQSHLEPKVLLRELDASSSEVEQIAQVDYGTFVSIDSQDFKRVVHELNAPS 130
Query: 165 LHVTLTNSQVKFSGPIAEIILTTEERKCIIGGLAAGDEIQFLIPFSFHTFYFELTNWSKR 203
++V+LT SQ+KF P EI+LT ER CI GG+ AG+ +F I F+ +L++ SKR
Sbjct: 131 VNVSLTASQIKFMVPRKEIVLTRRERGCITGGIPAGETFRFSITLHPLLFFHDLSHKSKR 190
BLAST of CcUC06G113310 vs. ExPASy TrEMBL
Match:
A0A6J1L3R9 (uncharacterized protein LOC111498890 OS=Cucurbita maxima OX=3661 GN=LOC111498890 PE=4 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18
Identity = 68/208 (32.69%), Postives = 99/208 (47.60%), Query Frame = 0
Query: 45 HPFTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSMRLSFLHFIPLYLV 104
H FT LQILP++F F S + HHS S+ Y TMFHM+L +SSM FI + +
Sbjct: 7 HHFTAALQILPEYFEYFNSNQTHHSRFSIEKFYITMFHMELRGYSSML-----FILIQAI 66
Query: 105 ARVNLYFTSP-------------------------------------------------- 164
+++L F +P
Sbjct: 67 NKISLAFENPQSHLEPKVLLRELDASPSEGEQIAQVDYGTFVSIDSQDFKRVVHELNAPS 126
Query: 165 LHVTLTNSQVKFSGPIAEIILTTEERKCIIGGLAAGDEIQFLIPFSFHTFYFELTNWSKR 203
++V+LT SQ+KF P EI+LT ER CI GG+ AG+ +F I F+ +L++ SKR
Sbjct: 127 VNVSLTASQIKFMVPRKEIVLTRRERGCITGGIPAGETFRFSITLHPLLFFHDLSHKSKR 186
BLAST of CcUC06G113310 vs. ExPASy TrEMBL
Match:
A0A6J1H7T7 (uncharacterized protein LOC111460352 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460352 PE=4 SV=1)
HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18
Identity = 79/245 (32.24%), Postives = 115/245 (46.94%), Query Frame = 0
Query: 6 LHDTTDLLDAITPFTKLSNRFILKCSPTIFSLSASLKFPHPFTVQLQILPQFFSLFISLK 65
+H DLL+ I N KCS ++ S P P ++LQ +PQFF+ F+ K
Sbjct: 9 VHHFIDLLNFIHGQVNYYNNMDFKCSKAKLTVIVSRPSPTPSIIELQTMPQFFTHFLCNK 68
Query: 66 PHHSLISLSYLYNTMFHMKLSHFSSMRLSFLH--------------------FIPLYL-- 125
P HS +S++ Y+ +F MK + F + +S F+PL L
Sbjct: 69 PFHSSMSVNDYYDILFDMKQTDFDLIAMSHWEGNAYLKFIFSSPSRCDGCEAFLPLLLAH 128
Query: 126 -----------------VARVNLYFT-----SPLHVTLTNSQVKFSGPIAEIILTTEERK 185
+ + L+ T + + VT++NS+ KFSG E L E+++
Sbjct: 129 EEVDVGVINYGIFVSIDLRKFTLFGTFLNDATHVMVTISNSKAKFSGGGEEFTLEQEKKE 188
Query: 186 CIIGGLAAGDEIQFLIPFSFHTFYFELTNWS--KRIWLFKST-NSWSIITAPIGLYVQYS 204
CIIGG+ GDE QF I + F+ L+ WS KR+W FKS N +I PIGLY +Y
Sbjct: 189 CIIGGVEEGDETQFEIITNETEFFNNLSRWSKAKRVWFFKSNDNGHGVIIIPIGLYARYL 248
BLAST of CcUC06G113310 vs. ExPASy TrEMBL
Match:
A0A6J1KUR4 (uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 6.4e-18
Identity = 73/200 (36.50%), Postives = 95/200 (47.50%), Query Frame = 0
Query: 47 FTVQLQILPQFFSLFISLKPHHSLISLSYLYNTMFHMKLSHFSSM--------------- 106
F LQILP+FF+ F S +PHHS I L Y M M++ F+SM
Sbjct: 13 FIASLQILPEFFTYFNSDEPHHSTIPLELFYIIMLRMEIRGFTSMYFTLFQPLTKVLLTF 72
Query: 107 ---------RLSFLHFIPLYLVARVNLYF-------------------TSPLHVTLTNSQ 166
L L +PL L ++ + +HV+LTNSQ
Sbjct: 73 QRSSHEPKVMLCELDSLPLELEEMEHIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQ 132
Query: 167 VKFSGPIAEIILTTEERKCIIGGLAAGDEIQFLIPFSFHTFYFELTNWSKRIWLFKSTNS 204
VKFS EI+LT EER+CIIGGLA G E +F I F+ EL+ +KR WLF S N
Sbjct: 133 VKFSASRKEIVLTKEERRCIIGGLAEGKEFEFSITLHPLVFFHELSYKAKRAWLFMSINF 192
BLAST of CcUC06G113310 vs. ExPASy TrEMBL
Match:
A0A6J1HJS7 (uncharacterized protein LOC111464207 OS=Cucurbita moschata OX=3662 GN=LOC111464207 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 8.4e-18
Identity = 78/237 (32.91%), Postives = 113/237 (47.68%), Query Frame = 0
Query: 12 LLDAITPFTKLSNRFILKCSPTIFSLSASLKFPHP-FTVQLQILPQFFSLFISLKPHH-S 71
LL A + + + L+ +P + SL +K P P F L + P FF+ F + K HH S
Sbjct: 11 LLKATSTLALIGEKADLRITPIMLSL--EVKHPSPAFNAGLLLSPGFFTFFYTNKIHHYS 70
Query: 72 LISLSYLYNTMFHMKLSHFSSM-------------------------------------- 131
+ISL Y TM M FSSM
Sbjct: 71 IISLELFYITMNIMNARGFSSMLFFLVERSNRLYLRFDHSKIEPKVTSFRELTLNPPEMN 130
Query: 132 ---RLSFLHFIPLYLVARVNL---YFTSPLHVTLTNSQVKFSGPIAEIILTTEERKCIIG 191
RL + F+ + N+ HVTLT+SQVKFS EI+LT +++CIIG
Sbjct: 131 HLARLDYATFVSIDSPTFRNIVTELHADYAHVTLTDSQVKFSNADKEIVLTKRKKQCIIG 190
Query: 192 GLAAGDEIQFLIPFSFHTFYFELTNWSKRIWLFKSTNSWSIITAPIGLYVQYSIYFP 203
++ DEI+F+I F+ +L++ S R+WLFKS+NS S + P+G+Y Q+ +YFP
Sbjct: 191 DVSEKDEIKFVITLQPTMFFHDLSHQSARVWLFKSSNSSSAMIVPVGMYTQFWVYFP 245
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1H5T5 | 7.6e-19 | 33.17 | uncharacterized protein LOC111460379 OS=Cucurbita moschata OX=3662 GN=LOC1114603... | [more] |
A0A6J1L3R9 | 1.7e-18 | 32.69 | uncharacterized protein LOC111498890 OS=Cucurbita maxima OX=3661 GN=LOC111498890... | [more] |
A0A6J1H7T7 | 1.7e-18 | 32.24 | uncharacterized protein LOC111460352 isoform X1 OS=Cucurbita moschata OX=3662 GN... | [more] |
A0A6J1KUR4 | 6.4e-18 | 36.50 | uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889... | [more] |
A0A6J1HJS7 | 8.4e-18 | 32.91 | uncharacterized protein LOC111464207 OS=Cucurbita moschata OX=3662 GN=LOC1114642... | [more] |
Match Name | E-value | Identity | Description | |