CcUC06G112270 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G112270
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein TIC 20
Location	CicolChr06: 3272917 .. 3276475 (+)
RNA-Seq Expression	CcUC06G112270
Synteny	CcUC06G112270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAATTAGGAAGAAAGAAAGAAAATAGTGAGAAAAAGCGTCGTATTTCATTTCAAAAAAATAAAAATCCAAACAAAACCCTATCCCTCATCCGTTTCTTCTTTCTGCTGTTGGCCCTCCGAAAAACGCACTACGGCGTGATTCCGGCACAGCTGCCCGCGGGCTTGAAGGTTGTGCGGCGAGGCCCACAAGCACCACGGCCCCTATCCAGCCATCAGAGATTTCAGCAAAGTAATTTCTCACCTGAGGCAATATTCGGCAGCTATCCACTACCCGAATGGCCCCAAATCGGATTCCCCATAACCTGTAGAAGTCAGGTTTGTGAGTTCGAACCTATTCGAATACATTTCAGCAGAGCCTACATTTTTGGATTAGTGGGTAGACTCGTTTCAAGTGTATTAAATCTGATTCTAACCATTGGGACTTATGTATAAAGGTTCGGATTGCGCGATTCAAGTTTAAGATTGATATTGGGTAAGAGATAGTTGTCTTCACGCTCTTGCAGATTCAATTCAATTAAGGTTTCAAACTGAATTTTAACCTTGGAATATTGTCTAGAATAACTTAACAGCGCTTTTGAAAGTGTAGTAAGTAGTTCTTGTGAAGTCTGTTTGCTGTTTGCTGTATGCTTTATATGCCTTGGTAAGTTTATGATATATAGAATTTAATTTGTATGCTACTAAAACTGTTATGTATTCTAGTCTGTGTAAATGTGCTATGATGTTGGGTTATGCCCTTGTGATGTTGAGCATGTTGGACGTTGAGAGTTTTTTTGCAACTATATGATAGTATGATATTTATGACGAAAACTTGCTCATGTTGTTTATGAGCTGAGTTGTGGCCTAGAAAGCATGTATAAAATGTGCACACATGGGACATTGTGAGATTAATTAGCGAGAAATGGGTTAGAGGACCTTGAATATGTGATAAAGAAAATTGGGGAGAGTATCCGGGCCTTGGGCATAAATTGTCATGGATGGTATTGTGTTAAGAAAAGTAAATGAATATCATGGCCTCAAGTATGAAGGGTCGACGACTGGTGTGTCACTATTGGATGTCAAGGCCTTGGGTATAGATGGTCGAGAGTTGACATTGCCAATATTGGATAAGAGGAGTATCAAAGCCTTGGGCTTGGGTATAGAATGTCGAGAGTCAGTGTGATGTGTCTTTGGATAAGTATTGGGGTCTTCGGTAGAAATGGGCAAGGGTTGGATGTTGAGTTCTGTGGAAAAGTGTTGAGGCTTTGGGTATGAATGGTCAAGAGTCAATGTGTAACGAAAGACTATGTGTTGAAGATGTAGAAATGATGGAATAAAGTTGAAAAGAGCAAGAGAGACATTTGAGAATTTAGCAAGGTGTGAGAGCTTGTTAGAGCTTGAGTTAGAGAATGGGTATGATATTATGCATGATATTATTATGATAGTATGTGTCACAGGGTTGGCATCAAACTATAATTTGGGGTTGTTACAGTATGCCACTTCAGGTTTGCTGTGACTTGTGAGAAGCATGAATCCATGTGTTGTGATATATGTTGTATGCTGTTGAAAGTTTAAGGTGAAAATTGATATAAATTCCCAAGTAAAATTAATTTCTTTTTCTTCCCAAATGACTAATTATCACTATGCCTTGCTTTTTGGTTTGTATGGGGCACCAATCTGGGTTTCTTTGATCGATCATCGGCCATGGGATTATTGCTAAGCTAGTTCTTCTCCTTTCTTGGATGTGCTTCTCCAAGTATCCACTTTTGGTTTCGGGGTCATGCACTCATTTTGTATCGGCCAATTTGTTATGGCTTCTTACTTTATCTCTTCATCATTTGTAATAGCCTAGGTTATCTTCTTCCTTTTTTCTTGGCATTTTTGTATCTATATTTTGATCTCTCTTCACGTATCTCTTTGGATATTTTATTCATCAATGAAATGTTTCTTATCCAAAAAGAAATAAAGTTATAGATAGACCAATATCAATAAACCATCGGTGAAAGTACTTAAAAGTTCTTGCTCACTAATGAGTGAAGTATGACCACTGTCAAGATTGTTCAAGAAAGTAGATCCATTTGTTAGATAAGAGAGTTACTAATGAGAATGATCCTTGATAATTGGGGATAGAAGCCTTTCTAACCAGAACAATCCCTACTTCACTATTACAATCAATGTTTTCAATATCAATTATGGAAAAACTATATAAAAAAGAATTCATTAAAATATTTAAATTTTAAAAAATAAGTATGGTACTCTTTGTTTTCCAATTCTTTCTTACACTCTGCAATGGTGTTGCGTAAACAGGTAACTTAGATATGATTCTCAATGGATGTACCACACCCACTGGGTGCTTCTTCTCAAATTCCAAGTTATCTATTCCTAGCCGTTCTGCCATCTCACGAAGTCCTCATTGCAGTATGCAAACTGCTAGTATTAGGAGTTCATGCAAACCACGTTTAGAGCATTGGACATGTTATTATAGAGGTGCATACTTCATCTCCCTCTTTTTGTGTGATCTCTTTCATTCAATATAATCTTCATTTCGTATAGAAAAAGAATTATTACTCTGGTGGAAACATTAATATAAAGAAATTCTTGTCTGACTTTTGTGATGCTGACATCTTGAAAAGAGTTATACCATCCTTTTCAGTAATTGATTCTATGAATGGTGTGCTTCATTTTGTAATCCATTGTTTTTCAAATGTAGGTCTCTTACCCTTAAAACTACGTGCTGCATCTTCCCCTCTCTTAAATGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGCAAAGAAAGATTGGCATGACACCACGGGCAGCCAAAGATGTCCCTACGAGTTTCCGTTTCCCTCCAATGACCACGAAACCAAAATGGTGGTGGAGGACATTAGCATGCCTACCTTATCTAATGCCCCTTCACGAAACTTGGATGTATGCCGAAACAGCATACCACCTACACCCGTTCCTGGAGGACTTTGAATTCTTGACATATCCCTTTCTCGGAGCCATTGGGAGACTACCAAGTTGGTTCTTGATGGCATATTTTTTCGTTGCCTATCTAGGAGTTGTAAGACGGAAGGAATGGCCTCATTTCTTTCGATTTCACGTTGTTATGGGCATGTTGTTGGAGATTGCCCTGCAAGTAATTGGTACAGTGAGTCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAATTAGGGATGCACTTTTGGACAGCCGTAGCATTCGCTTACCTGTTCACGGTCTTGGAATCCATACGCTGTGCTCTTGCAGGCATGTATGCTGATATCCCCTTTGTCTGTGATGCAGCCTACATCCAAATACCATATGATTAAGAACACTTCGGTCTGTAGTTGCGTGTGAGTAGAATGCGATGTAGACATGTAATTTTGCTACTGCCCTTGTGAAATGCGGTCGGAAATGAACATCAAACATTCTGAACTCTAACGACATTTCCTTTAGTTAGTCTTTGGGAAAACATGTATCTTTGTCTTTGTAGAAACTGAGGATTTTGTATGGAAGAAGAGCTTGTGGGCAAAGTAAAGAAGGAAACTCATCCTCACTGCCT

mRNA sequence

TAAAATTAGGAAGAAAGAAAGAAAATAGTGAGAAAAAGCGTCGTATTTCATTTCAAAAAAATAAAAATCCAAACAAAACCCTATCCCTCATCCGTTTCTTCTTTCTGCTGTTGGCCCTCCGAAAAACGCACTACGGCGTGATTCCGGCACAGCTGCCCGCGGGCTTGAAGGTTGTGCGGCGAGGCCCACAAGCACCACGGCCCCTATCCAGCCATCAGAGATTTCAGCAAAGTAATTTCTCACCTGAGGCAATATTCGGCAGCTATCCACTACCCGAATGGCCCCAAATCGGATTCCCCATAACCTGTAGAAGTCAGGTTCGGATTGCGCGATTCAAGTTTAAGATTGATATTGGGTAACTTAGATATGATTCTCAATGGATGTACCACACCCACTGGGTGCTTCTTCTCAAATTCCAAGTTATCTATTCCTAGCCGTTCTGCCATCTCACGAAGTCCTCATTGCAGTATGCAAACTGCTAGTATTAGGAGTTCATGCAAACCACGTTTAGAGCATTGGACATGTTATTATAGAGGTCTCTTACCCTTAAAACTACGTGCTGCATCTTCCCCTCTCTTAAATGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGCAAAGAAAGATTGGCATGACACCACGGGCAGCCAAAGATGTCCCTACGAGTTTCCGTTTCCCTCCAATGACCACGAAACCAAAATGGTGGTGGAGGACATTAGCATGCCTACCTTATCTAATGCCCCTTCACGAAACTTGGATGTATGCCGAAACAGCATACCACCTACACCCGTTCCTGGAGGACTTTGAATTCTTGACATATCCCTTTCTCGGAGCCATTGGGAGACTACCAAGTTGGTTCTTGATGGCATATTTTTTCGTTGCCTATCTAGGAGTTGTAAGACGGAAGGAATGGCCTCATTTCTTTCGATTTCACGTTGTTATGGGCATGTTGTTGGAGATTGCCCTGCAAGTAATTGGTACAGTGAGTCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAATTAGGGATGCACTTTTGGACAGCCGTAGCATTCGCTTACCTGTTCACGGTCTTGGAATCCATACGCTGTGCTCTTGCAGGCATGTATGCTGATATCCCCTTTGTCTGTGATGCAGCCTACATCCAAATACCATATGATTAAGAACACTTCGGTCTGTAGTTGCGTGTGAGTAGAATGCGATGTAGACATGTAATTTTGCTACTGCCCTTGTGAAATGCGGTCGGAAATGAACATCAAACATTCTGAACTCTAACGACATTTCCTTTAGTTAGTCTTTGGGAAAACATGTATCTTTGTCTTTGTAGAAACTGAGGATTTTGTATGGAAGAAGAGCTTGTGGGCAAAGTAAAGAAGGAAACTCATCCTCACTGCCT

Coding sequence (CDS)

ATGATTCTCAATGGATGTACCACACCCACTGGGTGCTTCTTCTCAAATTCCAAGTTATCTATTCCTAGCCGTTCTGCCATCTCACGAAGTCCTCATTGCAGTATGCAAACTGCTAGTATTAGGAGTTCATGCAAACCACGTTTAGAGCATTGGACATGTTATTATAGAGGTCTCTTACCCTTAAAACTACGTGCTGCATCTTCCCCTCTCTTAAATGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGCAAAGAAAGATTGGCATGACACCACGGGCAGCCAAAGATGTCCCTACGAGTTTCCGTTTCCCTCCAATGACCACGAAACCAAAATGGTGGTGGAGGACATTAGCATGCCTACCTTATCTAATGCCCCTTCACGAAACTTGGATGTATGCCGAAACAGCATACCACCTACACCCGTTCCTGGAGGACTTTGAATTCTTGACATATCCCTTTCTCGGAGCCATTGGGAGACTACCAAGTTGGTTCTTGATGGCATATTTTTTCGTTGCCTATCTAGGAGTTGTAAGACGGAAGGAATGGCCTCATTTCTTTCGATTTCACGTTGTTATGGGCATGTTGTTGGAGATTGCCCTGCAAGTAATTGGTACAGTGAGTCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAATTAGGGATGCACTTTTGGACAGCCGTAGCATTCGCTTACCTGTTCACGGTCTTGGAATCCATACGCTGTGCTCTTGCAGGCATGTATGCTGATATCCCCTTTGTCTGTGATGCAGCCTACATCCAAATACCATATGATTAA

Protein sequence

MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLPLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD

Homology

[Close]

BLAST of CcUC06G112270 vs. NCBI nr
Match: XP_038875339.1 (protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875340.1 protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875341.1 protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875342.1 protein TIC 20-I, chloroplastic [Benincasa hispida])

HSP 1 Score: 531.9 bits (1369), Expect = 3.1e-147
Identity = 256/269 (95.17%), Postives = 262/269 (97.40%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLP 60
           MILNGCTTPTGCFFSNSKLSIP RSAISRSPHCSMQTASIRSS +PRLEH TCYYRGLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPGRSAISRSPHCSMQTASIRSSWEPRLEHQTCYYRGLLP 60

Query: 61  LKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGM-TPRAAKDVPTSFRFPPMTTKPKWWWR 120
           LKLRAASSPLL+GDLGGLLH IPRLPRQ+KIGM TP+AAKDVPTSFRFPPMTTKPKWWWR
Sbjct: 61  LKLRAASSPLLSGDLGGLLHMIPRLPRQKKIGMTTPQAAKDVPTSFRFPPMTTKPKWWWR 120

Query: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 180
           TLACLPYLMPLHETWMYAETAYHLHPFLE+FE  TYPFLGAIGRLPSWFLMAYFFVAYLG
Sbjct: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEEFELFTYPFLGAIGRLPSWFLMAYFFVAYLG 180

Query: 181 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 240
           VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV
Sbjct: 181 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 240

Query: 241 LESIRCALAGMYADIPFVCDAAYIQIPYD 269
           LESIRCALAGMYAD+PFVCDAAYIQIPYD
Sbjct: 241 LESIRCALAGMYADVPFVCDAAYIQIPYD 269

[Close]

BLAST of CcUC06G112270 vs. NCBI nr
Match: XP_022151562.1 (protein TIC 20-I, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 506.1 bits (1302), Expect = 1.8e-139
Identity = 241/268 (89.93%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLP 60
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS +PRLEH TC+ +GLLP
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKGLLP 60

Query: 61  LKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 120
           LKLRAASSPLL+GDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWRT
Sbjct: 61  LKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWRT 120

Query: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 180
           LACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLGV 180

Query: 181 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 240
           VRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTVL 240

Query: 241 ESIRCALAGMYADIPFVCDAAYIQIPYD 269
           E IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 ECIRCALAGMYADIPFICDAAYIQIPYD 268

[Close]

BLAST of CcUC06G112270 vs. NCBI nr
Match: XP_022151560.1 (protein TIC 20-I, chloroplastic isoform X1 [Momordica charantia] >XP_022151561.1 protein TIC 20-I, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 501.5 bits (1290), Expect = 4.5e-138
Identity = 241/269 (89.59%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYR-GLL 60
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS +PRLEH TC+ + GLL
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKVGLL 60

Query: 61  PLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWR 120
           PLKLRAASSPLL+GDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWR
Sbjct: 61  PLKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWR 120

Query: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 180
           TLACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLG
Sbjct: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLG 180

Query: 181 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 240
           VVRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTV
Sbjct: 181 VVRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTV 240

Query: 241 LESIRCALAGMYADIPFVCDAAYIQIPYD 269
           LE IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 LECIRCALAGMYADIPFICDAAYIQIPYD 269

[Close]

BLAST of CcUC06G112270 vs. NCBI nr
Match: XP_008459737.1 (PREDICTED: protein TIC 20-I, chloroplastic-like [Cucumis melo] >KAA0039751.1 protein TIC 20-I [Cucumis melo var. makuwa] >TYK24746.1 protein TIC 20-I [Cucumis melo var. makuwa])

HSP 1 Score: 493.4 bits (1269), Expect = 1.2e-135
Identity = 230/268 (85.82%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLP 60
           MILNGCTTPTGCFFSNSKLSIPSRS+I R+P CS QTASIRSS +P L+H TCYY GLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPSRSSILRNPRCSTQTASIRSSWEPHLKHQTCYYGGLLP 60

Query: 61  LKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 120
           LKL AASSPLL+GDLGGLL TIPRLP ++ I MTPRA+KDVPTS+R+PPMTTKPKWWWRT
Sbjct: 61  LKLNAASSPLLSGDLGGLLSTIPRLPGKKNISMTPRASKDVPTSYRYPPMTTKPKWWWRT 120

Query: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 180
           LACLPYLMPLHETWMY ETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL+AYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYGETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLIAYFFVAYLGV 180

Query: 181 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 240
           VRRKEWPHF RFHVVMGML+EI+LQVIGT+SRW+P++VYWGKLGMHFWTAV FAY+FTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLMEISLQVIGTMSRWLPISVYWGKLGMHFWTAVCFAYMFTVL 240

Query: 241 ESIRCALAGMYADIPFVCDAAYIQIPYD 269
           E +RCALAGMYAD+PFVC+AAYIQIP+D
Sbjct: 241 ECMRCALAGMYADVPFVCNAAYIQIPFD 268

[Close]

BLAST of CcUC06G112270 vs. NCBI nr
Match: XP_023006630.1 (protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006631.1 protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006632.1 protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006633.1 protein TIC 20-I, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 491.5 bits (1264), Expect = 4.6e-135
Identity = 232/269 (86.25%), Postives = 252/269 (93.68%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQ-TASIRSSCKPRLEHWTCYYRGLL 60
           MILNGCTTPTG FFSNS+LSIP+RSAISRSP CSM   ASIRSS +P LEH TC YRG+ 
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 61  PLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWR 120
           PLKL A SS LL+GDLGGLLHTIPRLPR+R +GMTPRAAKD+PTS+RFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHLLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 180
           TLACLPYLMP HETWMY+ETAYHLHPFLEDFEFLTYPFL A+G+LP+WFL+AYFF+AYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 181 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 240
           +VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK+GMHFWTAV+FAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 241 LESIRCALAGMYADIPFVCDAAYIQIPYD 269
           LE++RCALAGMYADIPF CDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of CcUC06G112270 vs. ExPASy Swiss-Prot
Match: Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 9.4e-107
Identity = 185/213 (86.85%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 56  RGLLPLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPK 115
           RG+    L A+SS LLNG+ G L  T+P LP +RK  +TPRA+KDVP+SFRFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 116 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 175
           WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 176 AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAY 235
           AYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAVAFAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 236 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 269
           LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD
Sbjct: 242 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274

[Close]

BLAST of CcUC06G112270 vs. ExPASy Swiss-Prot
Match: Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.0e-81
Identity = 157/268 (58.58%), Postives = 185/268 (69.03%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLP 60
           MI NG T   G     +   IP++ A+S          SIRS     LE+     RG+  
Sbjct: 1   MIQNGGTVSQGSVLCYA-CQIPAKVAVS----------SIRSFWGHSLENKP---RGMTF 60

Query: 61  LKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 120
             + A SS LL+G    L  TIP LP   K   TPRA KD  + FRFPPMT KP+WWWRT
Sbjct: 61  TDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKD-SSGFRFPPMTKKPRWWWRT 120

Query: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 180
           L+C+PYL+P H+ WMYA TAYHLHPF+  F+ +TYPFL AIG LP W L+AYF +AYL +
Sbjct: 121 LSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLMAIGTLPRWSLIAYFLIAYLTI 180

Query: 181 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 240
           VRRKEWPHFFRFHV +GML+EIALQV G VSRWMP + YWGKLGMHFWT   F +LFT +
Sbjct: 181 VRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFWTTAFFVFLFTTI 240

Query: 241 ESIRCALAGMYADIPFVCDAAYIQIPYD 269
           E IRCAL GMYAD+PFVCDAAYIQIP++
Sbjct: 241 ECIRCALVGMYADVPFVCDAAYIQIPHE 253

[Close]

BLAST of CcUC06G112270 vs. ExPASy Swiss-Prot
Match: Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.5e-40
Identity = 87/190 (45.79%), Postives = 119/190 (62.63%), Query Frame = 0


Query: 77  GLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRTLACLPYLMPLHETWMY 136
           GL    P L R R+     R AKD     + P +  +P+WWWRTLAC+PYL+ L      
Sbjct: 85  GLPPLAPGLRRHRRPIEPARVAKDDFFKIKLPKIAERPEWWWRTLACVPYLISL----QI 144

Query: 137 AETAYHLHPFLEDFEF---LTYPFLGAIGRLPSWFLMAYFFVAYLGVVRRKEWPHFFRFH 196
           ++  +++ PFLE  +    + Y   GAI R P+WF M Y ++ Y+ VV+ KE PH+ RFH
Sbjct: 145 SDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFH 204

Query: 197 VVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVLESIRCALAGMYAD 256
           ++MGMLLE ALQVI   S + PL  + G+ GM++W A+ F Y+  +LE IRCALAG+YA 
Sbjct: 205 MMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQ 264

Query: 257 IPFVCDAAYI 264
           IPF+ DAA I
Sbjct: 265 IPFMTDAASI 270

[Close]

BLAST of CcUC06G112270 vs. ExPASy Swiss-Prot
Match: P73387 (Tic20 family protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1737 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.8e-04
Identity = 42/156 (26.92%), Postives = 72/156 (46.15%), Query Frame = 0


Query: 119 RTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYL 178
           R  + L Y++PL + +M+        P L+       P L    + P +     F V ++
Sbjct: 12  RFFSALIYVIPLIDAFMFGGFLLQQFPVLQIIYLPIMPLLQFYYQFP-FASFIIFIVLFM 71

Query: 179 GVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYL-- 238
            VVR     HF RF+ +  +L+ I L + G +  ++   V+    G+   T   FA+L  
Sbjct: 72  AVVRNNNISHFIRFNAMQAILIGILLSLFGLIVAYVIQPVF--GQGLVTETLYNFAFLGA 131

Query: 239 -----FTVLESIRCALAGMYADIPFVCDAAYIQIPY 268
                F +++S+     G YA+IP + DAAY Q+ +
Sbjct: 132 LACGFFGIVQSV----LGRYAEIPTISDAAYSQVRF 160

[Close]

BLAST of CcUC06G112270 vs. ExPASy TrEMBL
Match: A0A6J1DDV0 (Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 8.8e-140
Identity = 241/268 (89.93%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLP 60
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS +PRLEH TC+ +GLLP
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKGLLP 60

Query: 61  LKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 120
           LKLRAASSPLL+GDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWRT
Sbjct: 61  LKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWRT 120

Query: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 180
           LACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLGV 180

Query: 181 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 240
           VRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTVL 240

Query: 241 ESIRCALAGMYADIPFVCDAAYIQIPYD 269
           E IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 ECIRCALAGMYADIPFICDAAYIQIPYD 268

[Close]

BLAST of CcUC06G112270 vs. ExPASy TrEMBL
Match: A0A6J1DBI9 (Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138
Identity = 241/269 (89.59%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYR-GLL 60
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS +PRLEH TC+ + GLL
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKVGLL 60

Query: 61  PLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWR 120
           PLKLRAASSPLL+GDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWR
Sbjct: 61  PLKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWR 120

Query: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 180
           TLACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLG
Sbjct: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLG 180

Query: 181 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 240
           VVRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTV
Sbjct: 181 VVRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTV 240

Query: 241 LESIRCALAGMYADIPFVCDAAYIQIPYD 269
           LE IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 LECIRCALAGMYADIPFICDAAYIQIPYD 269

[Close]

BLAST of CcUC06G112270 vs. ExPASy TrEMBL
Match: A0A5A7TDM5 (Protein TIC 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003090 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.9e-136
Identity = 230/268 (85.82%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLP 60
           MILNGCTTPTGCFFSNSKLSIPSRS+I R+P CS QTASIRSS +P L+H TCYY GLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPSRSSILRNPRCSTQTASIRSSWEPHLKHQTCYYGGLLP 60

Query: 61  LKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 120
           LKL AASSPLL+GDLGGLL TIPRLP ++ I MTPRA+KDVPTS+R+PPMTTKPKWWWRT
Sbjct: 61  LKLNAASSPLLSGDLGGLLSTIPRLPGKKNISMTPRASKDVPTSYRYPPMTTKPKWWWRT 120

Query: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 180
           LACLPYLMPLHETWMY ETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL+AYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYGETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLIAYFFVAYLGV 180

Query: 181 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 240
           VRRKEWPHF RFHVVMGML+EI+LQVIGT+SRW+P++VYWGKLGMHFWTAV FAY+FTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLMEISLQVIGTMSRWLPISVYWGKLGMHFWTAVCFAYMFTVL 240

Query: 241 ESIRCALAGMYADIPFVCDAAYIQIPYD 269
           E +RCALAGMYAD+PFVC+AAYIQIP+D
Sbjct: 241 ECMRCALAGMYADVPFVCNAAYIQIPFD 268

[Close]

BLAST of CcUC06G112270 vs. ExPASy TrEMBL
Match: A0A1S3CAY7 (Protein TIC 20 OS=Cucumis melo OX=3656 GN=LOC103498780 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 5.9e-136
Identity = 230/268 (85.82%), Postives = 252/268 (94.03%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCKPRLEHWTCYYRGLLP 60
           MILNGCTTPTGCFFSNSKLSIPSRS+I R+P CS QTASIRSS +P L+H TCYY GLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPSRSSILRNPRCSTQTASIRSSWEPHLKHQTCYYGGLLP 60

Query: 61  LKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 120
           LKL AASSPLL+GDLGGLL TIPRLP ++ I MTPRA+KDVPTS+R+PPMTTKPKWWWRT
Sbjct: 61  LKLNAASSPLLSGDLGGLLSTIPRLPGKKNISMTPRASKDVPTSYRYPPMTTKPKWWWRT 120

Query: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 180
           LACLPYLMPLHETWMY ETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL+AYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYGETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLIAYFFVAYLGV 180

Query: 181 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 240
           VRRKEWPHF RFHVVMGML+EI+LQVIGT+SRW+P++VYWGKLGMHFWTAV FAY+FTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLMEISLQVIGTMSRWLPISVYWGKLGMHFWTAVCFAYMFTVL 240

Query: 241 ESIRCALAGMYADIPFVCDAAYIQIPYD 269
           E +RCALAGMYAD+PFVC+AAYIQIP+D
Sbjct: 241 ECMRCALAGMYADVPFVCNAAYIQIPFD 268

[Close]

BLAST of CcUC06G112270 vs. ExPASy TrEMBL
Match: A0A6J1KYA1 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111499301 PE=3 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.2e-135
Identity = 232/269 (86.25%), Postives = 252/269 (93.68%), Query Frame = 0


Query: 1   MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQ-TASIRSSCKPRLEHWTCYYRGLL 60
           MILNGCTTPTG FFSNS+LSIP+RSAISRSP CSM   ASIRSS +P LEH TC YRG+ 
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 61  PLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWR 120
           PLKL A SS LL+GDLGGLLHTIPRLPR+R +GMTPRAAKD+PTS+RFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHLLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 180
           TLACLPYLMP HETWMY+ETAYHLHPFLEDFEFLTYPFL A+G+LP+WFL+AYFF+AYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 181 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 240
           +VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK+GMHFWTAV+FAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 241 LESIRCALAGMYADIPFVCDAAYIQIPYD 269
           LE++RCALAGMYADIPF CDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of CcUC06G112270 vs. TAIR 10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )

HSP 1 Score: 387.9 bits (995), Expect = 6.7e-108
Identity = 185/213 (86.85%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 56  RGLLPLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPK 115
           RG+    L A+SS LLNG+ G L  T+P LP +RK  +TPRA+KDVP+SFRFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 116 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 175
           WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 176 AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAY 235
           AYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAVAFAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 236 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 269
           LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD
Sbjct: 242 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274

[Close]

BLAST of CcUC06G112270 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 345.1 bits (884), Expect = 5.0e-95
Identity = 165/193 (85.49%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 56  RGLLPLKLRAASSPLLNGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPK 115
           RG+    L A+SS LLNG+ G L  T+P LP +RK  +TPRA+KDVP+SFRFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 116 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 175
           WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 176 AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAY 235
           AYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAVAFAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 236 LFTVLESIRCALA 249
           LFTVLESIRCALA
Sbjct: 242 LFTVLESIRCALA 254

[Close]

BLAST of CcUC06G112270 vs. TAIR 10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )

HSP 1 Score: 166.4 bits (420), Expect = 3.2e-41
Identity = 87/190 (45.79%), Postives = 119/190 (62.63%), Query Frame = 0


Query: 77  GLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRTLACLPYLMPLHETWMY 136
           GL    P L R R+     R AKD     + P +  +P+WWWRTLAC+PYL+ L      
Sbjct: 85  GLPPLAPGLRRHRRPIEPARVAKDDFFKIKLPKIAERPEWWWRTLACVPYLISL----QI 144

Query: 137 AETAYHLHPFLEDFEF---LTYPFLGAIGRLPSWFLMAYFFVAYLGVVRRKEWPHFFRFH 196
           ++  +++ PFLE  +    + Y   GAI R P+WF M Y ++ Y+ VV+ KE PH+ RFH
Sbjct: 145 SDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTWFFMVYCYLGYMWVVKNKELPHYLRFH 204

Query: 197 VVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVLESIRCALAGMYAD 256
           ++MGMLLE ALQVI   S + PL  + G+ GM++W A+ F Y+  +LE IRCALAG+YA 
Sbjct: 205 MMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCALAGVYAQ 264

Query: 257 IPFVCDAAYI 264
           IPF+ DAA I
Sbjct: 265 IPFMTDAASI 270

The following BLAST results are available for this feature:

BLAST of CcUC06G112270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875339.1	3.1e-147	95.17	protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875340.1 protein TIC ...	[more]
XP_022151562.1	1.8e-139	89.93	protein TIC 20-I, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_022151560.1	4.5e-138	89.59	protein TIC 20-I, chloroplastic isoform X1 [Momordica charantia] >XP_022151561.1...	[more]
XP_008459737.1	1.2e-135	85.82	PREDICTED: protein TIC 20-I, chloroplastic-like [Cucumis melo] >KAA0039751.1 pro...	[more]
XP_023006630.1	4.6e-135	86.25	protein TIC 20-I, chloroplastic-like [Cucurbita maxima] >XP_023006631.1 protein ...	[more]

BLAST of CcUC06G112270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ79	9.4e-107	86.85	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
Q9ZST8	1.0e-81	58.58	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]
Q9ZQZ9	4.5e-40	45.79	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
P73387	1.8e-04	26.92	Tic20 family protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 ...	[more]

BLAST of CcUC06G112270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDV0	8.8e-140	89.93	Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1	[more]
A0A6J1DBI9	2.2e-138	89.59	Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1	[more]
A0A5A7TDM5	5.9e-136	85.82	Protein TIC 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00309...	[more]
A0A1S3CAY7	5.9e-136	85.82	Protein TIC 20 OS=Cucumis melo OX=3656 GN=LOC103498780 PE=3 SV=1	[more]
A0A6J1KYA1	2.2e-135	86.25	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111499301 PE=3 SV=1	[more]

BLAST of CcUC06G112270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04940.1	6.7e-108	86.85	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	5.0e-95	85.49	HIT-type Zinc finger family protein	[more]
AT4G03320.1	3.2e-41	45.79	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 87..261 e-value: 2.9E-73 score: 245.5
IPR005691	Chloroplast protein import component Tic20	TIGRFAM	TIGR00994	TIGR00994	coord: 1..268 e-value: 1.5E-122 score: 406.5
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	PROTEIN TIC 20-II, CHLOROPLASTIC	coord: 1..268
None	No IPR available	PANTHER	PTHR33510:SF9	HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED	coord: 1..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G112270.1	CcUC06G112270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane